Cp4.1LG09g06580 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g06580
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Unknown protein
Location	Cp4.1LG09: 4880581 .. 4884526 (+)
RNA-Seq Expression	Cp4.1LG09g06580
Synteny	Cp4.1LG09g06580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACATTAGAAAAAGTCCAAAATGAAAGTAAAACCGAATTGACGACGGTATCACAATGTTCTCAGAGCCAGAGCACTCCAAATCGAATTCACGACGGTATCACAATCGCAGTTCATACTTCAGCTTCTCTTTCCAGCAATTCGGCGGGCGCGACGCTCCGAATATGTCTACCAGTTCACATTACAGTAGCTGCAACTCTCGTCGGTAAATGAGGTTTCGCCTTTTTCTCTTTTTATGCTTTACTTTGTTGCAATTTTCCTCGTTCTTGCTTTTCCTTGCCAATTTTACATCTGCCTCGTATTCTAGTTTGCTAATATGCCAATTTCCCCACGATTTTGGGTAAAAATTCGTTGGTTTGTGAGGATCAAAGGTGAGGTACTTTTAGATGCTTTGTTTGTTTGGGGAATTTGTTTCGATTTTTTCCTTGGAAAAAAGATGTGGTCAACAGATTAGATCATTGGAAGTTGAATGATGGTTCTATGAATATCCCAACTGGGAGTTTCCGTGGTAATAGGGGTTGGCGTCTTAGATGGGACTTGGGAGTTCAGTTCTAGGTTTGGGTCTAAGCCTCCAAGTGGAATGTTTCTGAATGCTGGATCATTAAAAACTCTAATCCTCTGCTGGAGTTGATATTAGTTATCAAACTTGGAGATCTCTAAACTAGGCATTTAGACTTTAAAAATGCCTAGCCCAAAATTCATTGCTAGCACATATTGTCCGCTTTGGCCTGTTACATGTCGCCGTCAGCCTCATGGTTTTTAAAACGCCTCTAATAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCACCTCTTCAATTGATGTGGTATCTCACAATCCACCCCCTTTAGGGCATAATGTCCTCACTGACACAGTGCCTGGTGTCTACCCCTTCGAGGCTCAACGTTCTCACTGGCACACCAGGCTTAGCGTCCTCGCTAGCACACCGCCTGGTGTCTGGCTCTGATACCATTTGTAACAACCTAAGCCTATGACTAGCAAATATTGTCCTCTTTGAGCTTTCCCTTACATACTTCCCTTCATGATTTTAAGATGCGTTTTAAAAACCTTGAGGGAAGACCGAAAGGGAAAGCCCAATGAAGACAATATCGTTAGCGGTGGGCTTCGGTCGTTACACAAGACAAGGATAAAATATATATAATACAAATGTACTACAAGAGATTAAAAGAACTACTTGACCATTAGTGGTCTCACAGATTTGATTCGTGAATATTTGTAAAGACCAATGATTAGGTTTTTTGTTCAACAAAACCACTTCCCTTTCTTCCAATTCTATGTGATTACCCCTTCGAAAGTTACTACATATTATTTTCAATGGGCAAATCTGTATTTCCCTTCAAGGACTCTGGTATGTTTATCTATTTCAGTAATTCTTGAAGTTCCATGTTTGAGAAAAGTTAGGTCTTGATAACTTGAAATGCACGTGTATATTTCTTTGTTCAACTCCCTCCACACACCAGGCACATTTCACATTCCAGCCTTCGATGATTTGTTTGTATGCGTATCTATGATTCAATTATTTGTCACCTGGACTGATGATGGTGCCTGTTCATTTCGGCTACTGTAAACGTGCAAAACAACAGAAATTCAATTCTGAAGCACGTAAAGATCAGAGGACCTACAACACAGTTGTTGATGAAGGATGAGAATGTAATGGAGAAACTAACTCACCATCTGTGTTCATCAACAGGTTCAAGTTCTGACGAAATAGTGATCGGGTGATTGGATTGGTTAAGAAATTCGATAGAGTCGATGCCTGTCAGGTAATTAGTCCATGGTCACCCCATCATCTCATCTTTATATTTTTATATCACTTGTCATGTCAGGATCTTGTAGATTCCTTCCTAATTATCATATCCTATTAAGTTCAGTATATATATTTGTTGAAATAAAGACATTTCTTAACGTTGGATGTTGTGTTGAGCCGAGCAGGTTACTGAAACGGCGGATTTCCAGGAAGACCTAACTCTGGACAGTTTGGACTTGGACAGGGTGGATGTAATGGCCCAGGCCCACCGCTAGCCGATATTGTCCTCTTTGGACTTTCCCTTTTGGGCTTCCCCTCAAGGTTTATAAAACGCGTCTGCTAGTGAGAGGTTCCACACCCTTATAAAGGGTGTTTCGTTCTCTTCCCCAACCGATGTGGGATCTCACAATCCACCTCATTTAGGGCCCAGCGAGTCTGCCCCCATTCAGGGCCCAACGTTCTCGCTGGTACTCGTTCCTTTCTCTAATTGATGTGGGACCATCGCTAAATCCACTCTTTCCCAACCGATGTGGGATCTCACAATCCACCCCCATTCAGGGCTCAATGTCCTCATGGGCACTCGTTCCTTTCTCCAATTGATGTGGGATCACCACTAAATCCATCCCCTTCAGGGCCCAGCGTCCTCGCTGACACTCGTTTCTTTCTCCAATTGATGTGGGACCACCATCAAATCTACCCCCCTTCGGGGCCAGCACCCTTATTGCACACCGCCTCGTGTCTACCTCCTTTTGGGGAACAACCTCCTCGTTGGCACATCACCCGATTTCTGGCTCTAATTCCATTTGTAACAGCCCAGGCCGGGCTTTCCCTTTCGGACTTTCCCTCAAGGTTTCTAAAATGCGTTTGCTAGGGAGAGGCTTCCACACCCTTATAAAGGTTGTTTCGTTCTCCTCCCCAACCGATGTAGGATCTCACTGTGGAGCTTGGAGCTTGTAATGGCTTTTGAACAAGATTTCTCCATTGAAATACCAGATGAAAATGCCTATAAGCTTACTTGCTGTGCCGATGTACAGGAGGACTCGATTCAGTCGACACTTCTGCCATATATGGTATGAAATAAATTGCTGTATTACATAAACATATCTGTGTTTATACACTAACAATACATATTTCTGCAAGCTCCATTTATCATTTTAACTACAAACCAACTCATCGTTGTGACTTCAGCGCCATCTACATGAGCCGTATATTATGGTCTACCATAAGGTCTGTTGATCACCAATTCCCTTATTTTTACAAGCTTGTAGGGGTTGAGATGTTTGGTGCTGCAACCTGAGGATACCAGAAGTATACATGCGGATGCCTCCTCCAAACGACGATAATTGCAGCTGTTTGCGACCTGCAAAATGAGCAGGTCGACAGCGTATGTTCTTTGGTGTGCGAAGAATCTTGATGGAACAGACCTTTTCAAAGCTCTGTGTTGCATGAAACCGGGATGGAATATCAATAATGAAGTCTCCAAATTCATCTGTGATTCCACGTACCCAATCAGAAGATTTGCTGTTTTTTCTAGAGTTGTGGCACCTCACACCCACCATGGCACCTGCAGTGATTGATATTCATCAGAAAGGTAAAAACCAAGCTTGATCTCATAGTTTTTCTTAAAGGCTAGCTGCAATTATAGTACCTTTTACAGGCCATGCATGAACTCGAGGTTCATCACCATGCAAACAAGCTTCACAAAGAAGAGAGCCTGTGACCAAAACTGTGGACAGTCTCTCCTCGCCATATCCTGCTGTCTGCCTCCATTCGTCTCGACTCAACAGATCGGATAACGGGGTCTCACGTTCCACAGATTCGACTACCGTCGGAAATCCATAGGCAAAAAGGAGGAAGAAGAAGAAGAAGAAGAAACAATGGTAGAAGCTGCAAACTCTGGTCAGCATCTTCTTTCTTTAGGCTTTAGGAAACTAATATGATCACACAAATCAATCTGACACCATATTAGATGCATATTCCTTGGGTTATATAATCTTTTTAGAACGAGACATCTTCCATTTTCTCGACACGTTGAAGTTACCGAAATACCCTTTCTGGGTTTGACATTGGTTACTTTATGTGTTGGATTTTGACCATCTTCCCCTCTTAGGGGTAGGCTTTTACCAGATGAAAAAGATGGGTTCTATTTTATGTGAATTTGACCAGAAGGC

mRNA sequence

AAAACATTAGAAAAAGTCCAAAATGAAAGTAAAACCGAATTGACGACGGTATCACAATGTTCTCAGAGCCAGAGCACTCCAAATCGAATTCACGACGGTATCACAATCGCAGTTCATACTTCAGCTTCTCTTTCCAGCAATTCGGCGGGCGCGACGCTCCGAATATGTCTACCAGTTCACATTACAGTAGCTGCAACTCTCGTCGAGTTGTGGCACCTCACACCCACCATGGCACCTGCAGTGATTGATATTCATCAGAAAGGCCATGCATGAACTCGAGGTTCATCACCATGCAAACAAGCTTCACAAAGAAGAGAGCCTGTGACCAAAACTGTGGACAGTCTCTCCTCGCCATATCCTGCTGTCTGCCTCCATTCGTCTCGACTCAACAGATCGGATAACGGGGTCTCACGTTCCACAGATTCGACTACCGTCGGAAATCCATAGGCAAAAAGGAGGAAGAAGAAGAAGAAGAAGAAACAATGGTAGAAGCTGCAAACTCTGGTCAGCATCTTCTTTCTTTAGGCTTTAGGAAACTAATATGATCACACAAATCAATCTGACACCATATTAGATGCATATTCCTTGGGTTATATAATCTTTTTAGAACGAGACATCTTCCATTTTCTCGACACGTTGAAGTTACCGAAATACCCTTTCTGGGTTTGACATTGGTTACTTTATGTGTTGGATTTTGACCATCTTCCCCTCTTAGGGGTAGGCTTTTACCAGATGAAAAAGATGGGTTCTATTTTATGTGAATTTGACCAGAAGGC

Coding sequence (CDS)

AAAACATTAGAAAAAGTCCAAAATGAAAGTAAAACCGAATTGACGACGGTATCACAATGTTCTCAGAGCCAGAGCACTCCAAATCGAATTCACGACGGTATCACAATCGCAGTTCATACTTCAGCTTCTCTTTCCAGCAATTCGGCGGGCGCGACGCTCCGAATATGTCTACCAGTTCACATTACAGTAGCTGCAACTCTCGTCGAGTTGTGGCACCTCACACCCACCATGGCACCTGCAGTGATTGATATTCATCAGAAAGGCCATGCATGA

Protein sequence

KTLEKVQNESKTELTTVSQCSQSQSTPNRIHDGITIAVHTSASLSSNSAGATLRICLPVHITVAATLVELWHLTPTMAPAVIDIHQKGHA

Homology

[Close]

BLAST of Cp4.1LG09g06580 vs. NCBI nr
Match: XP_022925341.1 (uncharacterized protein LOC111432627 isoform X2 [Cucurbita moschata])

HSP 1 Score: 77.4 bits (189), Expect = 2.98e-16
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 29 RIHDGITIAVHTSASLSSNSAGATLRICLPVHITVAATLV 68
          RIHDGITIAVHTSASLSSNSAGATLRICLPVHITVAATLV
Sbjct: 4  RIHDGITIAVHTSASLSSNSAGATLRICLPVHITVAATLV 43

[Close]

BLAST of Cp4.1LG09g06580 vs. NCBI nr
Match: XP_022925340.1 (uncharacterized protein LOC111432627 isoform X1 [Cucurbita moschata])

HSP 1 Score: 77.4 bits (189), Expect = 4.43e-16
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 29 RIHDGITIAVHTSASLSSNSAGATLRICLPVHITVAATLV 68
          RIHDGITIAVHTSASLSSNSAGATLRICLPVHITVAATLV
Sbjct: 4  RIHDGITIAVHTSASLSSNSAGATLRICLPVHITVAATLV 43

[Close]

BLAST of Cp4.1LG09g06580 vs. NCBI nr
Match: KAG6573524.1 (hypothetical protein SDJN03_27411, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 52.8 bits (125), Expect = 1.17e-06
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 0


Query: 69 ELWHLTPTMAPAVIDIHQKGHA 90
          ELWHLTPTMAPAVIDIHQKGHA
Sbjct: 61 ELWHLTPTMAPAVIDIHQKGHA 82

[Close]

BLAST of Cp4.1LG09g06580 vs. NCBI nr
Match: KAG7012642.1 (hypothetical protein SDJN02_25394, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 48.1 bits (113), Expect = 1.28e-04
Identity = 20/20 (100.00%), Postives = 20/20 (100.00%), Query Frame = 0


Query: 69 ELWHLTPTMAPAVIDIHQKG 88
          ELWHLTPTMAPAVIDIHQKG
Sbjct: 22 ELWHLTPTMAPAVIDIHQKG 41

[Close]

BLAST of Cp4.1LG09g06580 vs. ExPASy TrEMBL
Match: A0A6J1EBY5 (uncharacterized protein LOC111432627 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432627 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.45e-16
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 29 RIHDGITIAVHTSASLSSNSAGATLRICLPVHITVAATLV 68
          RIHDGITIAVHTSASLSSNSAGATLRICLPVHITVAATLV
Sbjct: 4  RIHDGITIAVHTSASLSSNSAGATLRICLPVHITVAATLV 43

[Close]

BLAST of Cp4.1LG09g06580 vs. ExPASy TrEMBL
Match: A0A6J1EHN9 (uncharacterized protein LOC111432627 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432627 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.15e-16
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 29 RIHDGITIAVHTSASLSSNSAGATLRICLPVHITVAATLV 68
          RIHDGITIAVHTSASLSSNSAGATLRICLPVHITVAATLV
Sbjct: 4  RIHDGITIAVHTSASLSSNSAGATLRICLPVHITVAATLV 43

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g06580 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG09g06580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925341.1	2.98e-16	100.00	uncharacterized protein LOC111432627 isoform X2 [Cucurbita moschata]	[more]
XP_022925340.1	4.43e-16	100.00	uncharacterized protein LOC111432627 isoform X1 [Cucurbita moschata]	[more]
KAG6573524.1	1.17e-06	100.00	hypothetical protein SDJN03_27411, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7012642.1	1.28e-04	100.00	hypothetical protein SDJN02_25394, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cp4.1LG09g06580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBY5	1.45e-16	100.00	uncharacterized protein LOC111432627 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EHN9	2.15e-16	100.00	uncharacterized protein LOC111432627 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Cp4.1LG09g06580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g06580.1	Cp4.1LG09g06580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process