Cp4.1LG09g05940 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g05940
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	F-box protein At1g67340-like
Location	Cp4.1LG09: 4090341 .. 4092320 (-)
RNA-Seq Expression	Cp4.1LG09g05940
Synteny	Cp4.1LG09g05940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAGCATAAAATTTCCATGTTACCGACAGCTGGGTATCATGTCGTGAAGGGGTCGCAGTGTTAATACTTTCATCCGACTATATAAACCACCGGATTTGCTTTTTCTCTTTTACCACAACAAGAGAGAAACCCACATCGGATTCATCCATGAGAACTCGAACAGGCCTCTGTTACCCTCGACTTGAAACCACCCTCTGCTCCGACAGCCGTCATCGCAAAAGAATTCACGATGTCGCCGCCGACCGACGCCGCCATTTTTGTCGGAAAAGAACCAAGCTCTCTCCACAAATCACTCCGCCGCCGCCGCCGCCTTCCGATTTGTTTGATTCCTTGCCCGACGACCTCGTCATTTCGATTCTCTCTAAACTCAGCTCCGCGGCCTCTTCCCCCTCCGATTTCATCAACATCTTGCTAACGTACGCCTTTTTCCATTTTTTTTTTTTTTTAATGGGTTCAATTTATTTTTAGATTTAATTTTGGTAATGGGTTTAATTTAAAATTTGTTATTATTTGTTGCAGATGCAAAAGATTAAATAATTTAGGACTTATTCCCATGGTGTTATCCAAAGCTTCTCAGAAGACGTTTGCAATTAAGGCACGGAATTGGTCGGAATCCGCTCATCGGTTTCTTAAGCGGTGTTCCGACGCCGGAAATGTTGATGCCAGTTATACCCTTGGCATGGTTAGTTATTTTTTTTTATTATTTAATTTATTATAATTTCATTTTGTAAGCTATAAAAATTCCGTTTAATTTCCGATTTTAAAAATTAATTCGAAATTTGGGAATGGCCGTACAGATTCGTTTCTACTGTTTGCAAAACAGAGGAAGTGGAGCTTCGCTGATGGCTAAAGCGGCGATTTGTTCCCACGCGCCGGCGCTTTACTCACTCGCTGTCATTCAGTTCAACGGCAGCGGCGGTTCCAAAAGCGATAAGGATCTCCGTGCTGGAGTTGCTTTGTGCGCACGTGCTGCTTTTCTCGGTCACATCGACGCGCTTAGAGAACTCGGGCATTGTCTTCAAGACGGTTACGGCGTTCGTCAGAATATAACAGAGGGGCGTCGGTTTCTTGTCCAGGCCAACGCGCGTGAACTCGCCGCCGTGCTCTCGTCGGAGGCGGGTTCTTCGGTGATTGCATCGCGGTGTTGTCTTACGTGGAACCCTCACGTTCCACACCGGCACGTGACGGGCTCGGGATGTCCGTTGTTAAGCGATTTCGGTTGTAATATCCCGGCGCCGGAAGCTCATCCGGTGAGTCGGTTTATGGCGGAGTGGTTTGGGGCACGTGGGGAGTCGCCGGGGGTTGGGCTGAGGATGTGTTCGCACGTGGGGTGTGGACGGCCGGAAACGAGACAGCATGAGTTCCGTCGATGTTCTGTTTGTGGCTCTGTTAATTACTGCTCACGTGCGTGTCAGGCGCTGGATTGGAAACTCCGCCATAAGATGGATTGTGCGCCGGTTGAACGTTGGGTTGATGATAACGGCGACGGTGGGGCCGATGATATCATGGCCGAAAGTTAAAAAAAAAAAAAAAAAATTGGAAAATTAAAAGAGGGGAATTGACAGTAGCCGGTAGCCGGTTGTAAACGTTGGCGGCTTCTCGTGAAATTTAGTCGAGGAGACGTAAAAGTAAAGCGAGAGAATAAAAAAAAAAAAAAAAGGAAAAAGAAAAAGAAAATCATGGAGGCCGTTTTTTGTCGGAGAAATTAATTATCTGATTGCCGGCGGCGCGGCGCGGCGGAGATTTGTTTGTCCTTTTGTGTACAGGGCGGCGGGCGGTGGCGGTTTTTTTTTGGGAAGTTCTGGAGCCTAATTTTTGTACCATACAGCGACTAGAATTTTACAATCCTTCCCTTTTATTCAGTTATTAAAATTATAAATTAAAAAACTTTTTTTTTTTCTATATTTTTTATTCTGTACATTTATTTATTTTTTTCGTAATTATAAAAATTAAAAAAATAAAAAACACGGAGAAAAATTA

mRNA sequence

ATAGCATAAAATTTCCATGTTACCGACAGCTGGGTATCATGTCGTGAAGGGGTCGCAGTGTTAATACTTTCATCCGACTATATAAACCACCGGATTTGCTTTTTCTCTTTTACCACAACAAGAGAGAAACCCACATCGGATTCATCCATGAGAACTCGAACAGGCCTCTGTTACCCTCGACTTGAAACCACCCTCTGCTCCGACAGCCGTCATCGCAAAAGAATTCACGATGTCGCCGCCGACCGACGCCGCCATTTTTGTCGGAAAAGAACCAAGCTCTCTCCACAAATCACTCCGCCGCCGCCGCCGCCTTCCGATTTGTTTGATTCCTTGCCCGACGACCTCGTCATTTCGATTCTCTCTAAACTCAGCTCCGCGGCCTCTTCCCCCTCCGATTTCATCAACATCTTGCTAACATGCAAAAGATTAAATAATTTAGGACTTATTCCCATGGTGTTATCCAAAGCTTCTCAGAAGACGTTTGCAATTAAGGCACGGAATTGGTCGGAATCCGCTCATCGGTTTCTTAAGCGGTGTTCCGACGCCGGAAATGTTGATGCCAGTTATACCCTTGGCATGATTCGTTTCTACTGTTTGCAAAACAGAGGAAGTGGAGCTTCGCTGATGGCTAAAGCGGCGATTTGTTCCCACGCGCCGGCGCTTTACTCACTCGCTGTCATTCAGTTCAACGGCAGCGGCGGTTCCAAAAGCGATAAGGATCTCCGTGCTGGAGTTGCTTTGTGCGCACGTGCTGCTTTTCTCGGTCACATCGACGCGCTTAGAGAACTCGGGCATTGTCTTCAAGACGGTTACGGCGTTCGTCAGAATATAACAGAGGGGCGTCGGTTTCTTGTCCAGGCCAACGCGCGTGAACTCGCCGCCGTGCTCTCGTCGGAGGCGGGTTCTTCGGTGATTGCATCGCGGTGTTGTCTTACGTGGAACCCTCACGTTCCACACCGGCACGTGACGGGCTCGGGATGTCCGTTGTTAAGCGATTTCGGTTGTAATATCCCGGCGCCGGAAGCTCATCCGGTGAGTCGGTTTATGGCGGAGTGGTTTGGGGCACGTGGGGAGTCGCCGGGGGTTGGGCTGAGGATGTGTTCGCACGTGGGGTGTGGACGGCCGGAAACGAGACAGCATGAGTTCCGTCGATGTTCTGTTTGTGGCTCTGTTAATTACTGCTCACGTGCGTGTCAGGCGCTGGATTGGAAACTCCGCCATAAGATGGATTGTGCGCCGGTTGAACGTTGGGTTGATGATAACGGCGACGGTGGGGCCGATGATATCATGGCCGAAAGTTAAAAAAAAAAAAAAAAAATTGGAAAATTAAAAGAGGGGAATTGACAGTAGCCGGTAGCCGGTTGTAAACGTTGGCGGCTTCTCGTGAAATTTAGTCGAGGAGACGTAAAAGTAAAGCGAGAGAATAAAAAAAAAAAAAAAAGGAAAAAGAAAAAGAAAATCATGGAGGCCGTTTTTTGTCGGAGAAATTAATTATCTGATTGCCGGCGGCGCGGCGCGGCGGAGATTTGTTTGTCCTTTTGTGTACAGGGCGGCGGGCGGTGGCGGTTTTTTTTTGGGAAGTTCTGGAGCCTAATTTTTGTACCATACAGCGACTAGAATTTTACAATCCTTCCCTTTTATTCAGTTATTAAAATTATAAATTAAAAAACTTTTTTTTTTTCTATATTTTTTATTCTGTACATTTATTTATTTTTTTCGTAATTATAAAAATTAAAAAAATAAAAAACACGGAGAAAAATTA

Coding sequence (CDS)

ATGAGAACTCGAACAGGCCTCTGTTACCCTCGACTTGAAACCACCCTCTGCTCCGACAGCCGTCATCGCAAAAGAATTCACGATGTCGCCGCCGACCGACGCCGCCATTTTTGTCGGAAAAGAACCAAGCTCTCTCCACAAATCACTCCGCCGCCGCCGCCGCCTTCCGATTTGTTTGATTCCTTGCCCGACGACCTCGTCATTTCGATTCTCTCTAAACTCAGCTCCGCGGCCTCTTCCCCCTCCGATTTCATCAACATCTTGCTAACATGCAAAAGATTAAATAATTTAGGACTTATTCCCATGGTGTTATCCAAAGCTTCTCAGAAGACGTTTGCAATTAAGGCACGGAATTGGTCGGAATCCGCTCATCGGTTTCTTAAGCGGTGTTCCGACGCCGGAAATGTTGATGCCAGTTATACCCTTGGCATGATTCGTTTCTACTGTTTGCAAAACAGAGGAAGTGGAGCTTCGCTGATGGCTAAAGCGGCGATTTGTTCCCACGCGCCGGCGCTTTACTCACTCGCTGTCATTCAGTTCAACGGCAGCGGCGGTTCCAAAAGCGATAAGGATCTCCGTGCTGGAGTTGCTTTGTGCGCACGTGCTGCTTTTCTCGGTCACATCGACGCGCTTAGAGAACTCGGGCATTGTCTTCAAGACGGTTACGGCGTTCGTCAGAATATAACAGAGGGGCGTCGGTTTCTTGTCCAGGCCAACGCGCGTGAACTCGCCGCCGTGCTCTCGTCGGAGGCGGGTTCTTCGGTGATTGCATCGCGGTGTTGTCTTACGTGGAACCCTCACGTTCCACACCGGCACGTGACGGGCTCGGGATGTCCGTTGTTAAGCGATTTCGGTTGTAATATCCCGGCGCCGGAAGCTCATCCGGTGAGTCGGTTTATGGCGGAGTGGTTTGGGGCACGTGGGGAGTCGCCGGGGGTTGGGCTGAGGATGTGTTCGCACGTGGGGTGTGGACGGCCGGAAACGAGACAGCATGAGTTCCGTCGATGTTCTGTTTGTGGCTCTGTTAATTACTGCTCACGTGCGTGTCAGGCGCTGGATTGGAAACTCCGCCATAAGATGGATTGTGCGCCGGTTGAACGTTGGGTTGATGATAACGGCGACGGTGGGGCCGATGATATCATGGCCGAAAGTTAA

Protein sequence

MRTRTGLCYPRLETTLCSDSRHRKRIHDVAADRRRHFCRKRTKLSPQITPPPPPPSDLFDSLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWSESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAVLSSEAGSSVIASRCCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFMAEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKMDCAPVERWVDDNGDGGADDIMAES

Homology

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BLAST of Cp4.1LG09g05940 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 7.3e-137
Identity = 248/369 (67.21%), Postives = 289/369 (78.32%), Query Frame = 0


Query: 20  SRHRKRIH--DVAADRRRHFCRKRTKLSPQITPPP--PPPSDLFDSLPDDLVISILSKLS 79
           SR  KR+   D    R+R  C     +   ++P P     +DL DS+PDDLVISIL KL 
Sbjct: 4   SRKTKRVFSCDFTPGRKRRRC---VVVPSSVSPVPENTTGADLLDSIPDDLVISILCKLG 63

Query: 80  SAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWSESAHRFLKRCSDAGN 139
           S +  P+DFIN+LLTCKRL  L + P+VLS+ S K  A+KA NWSE +HRFLKRC DAG+
Sbjct: 64  STSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVKAHNWSEYSHRFLKRCVDAGS 123

Query: 140 VDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGSKSDKDLRAG 199
           ++A YTLGMIRFYCLQNRG+GASLMAKAAI SHAPALYSLAVIQFNGSGGSK+DKDLRAG
Sbjct: 124 LEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAG 183

Query: 200 VALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAVLSSEAGSSV 259
           VALCARAAFLGH+DALRELGHCLQDGYGV QN++EGRRFLVQANARELAAVLSS  G   
Sbjct: 184 VALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFLVQANARELAAVLSS--GIQA 243

Query: 260 IASRCCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFMAEWFGAR-GESPGVG 319
            ++   L+  P     +     CPLLSDFGCN+PAPE HP +RF+A+WF  R G+ PG G
Sbjct: 244 RSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDG 303

Query: 320 LRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKMDCAPVERWVDDNGD 379
           LR+CSH GCGRPETR+HEFRRCSVCG VNYCSRACQALDWKLRHKMDCAPV+RW+++ GD
Sbjct: 304 LRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKLRHKMDCAPVQRWLEE-GD 363

Query: 380 GGADDIMAE 384
           GG  ++  +
Sbjct: 364 GGEGNVQID 366

[Close]

BLAST of Cp4.1LG09g05940 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.5e-110
Identity = 199/320 (62.19%), Postives = 239/320 (74.69%), Query Frame = 0


Query: 59  FDSLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARN 118
           F+ L DDL+ISIL KL+++ASSPSDF+ +L TCKRLN LGL P+VLSKA  +T A+ A  
Sbjct: 22  FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81

Query: 119 WSESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVI 178
           WS+S+H+FLK C +AGN+DASY+LGMIRFYCLQN  SGASLMAKAAI SHAPALYSL+VI
Sbjct: 82  WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

Query: 179 QFNGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQA 238
           QFNGSGGSK+DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGYGV ++++EGRR L+QA
Sbjct: 142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201

Query: 239 NARELAAVLSSEAGSSVIASRCCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSR 298
           NARELA  L S                        +G     L+D    +P  E HPV+R
Sbjct: 202 NARELACSLRSYLSLK-------------------SGDENETLTDLSV-VPVQEIHPVNR 261

Query: 299 FMAEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRH 358
           F+ EWF +       GLRMCSH GCGRPETR HEFRRCSVCG VNYCSR CQALDW+ +H
Sbjct: 262 FLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKH 321

Query: 359 KMDCAPVERWVDDNGDGGAD 379
           K++C P++ WV    + G D
Sbjct: 322 KVECTPLDLWVAAAAEIGDD 321

[Close]

BLAST of Cp4.1LG09g05940 vs. ExPASy Swiss-Prot
Match: Q2YDC9 (Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.9e-04
Identity = 21/53 (39.62%), Postives = 28/53 (52.83%), Query Frame = 0


Query: 314 GLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKMDCAPVE 367
           G  +C   GC  P       +RCS C   +YCS+  Q+LDW+L HK  CA  +
Sbjct: 131 GAHLCRVCGCSGP-------KRCSRCHKAHYCSKEHQSLDWRLGHKQACAQTD 176

[Close]

BLAST of Cp4.1LG09g05940 vs. ExPASy Swiss-Prot
Match: Q9FPS9 (Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP15 PE=1 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 2.5e-04
Identity = 18/32 (56.25%), Postives = 22/32 (68.75%), Query Frame = 0


Query: 335 RCSVCGSVNYCSRACQALDWKLRHKMDCAPVE 367
           RCS C SV YCS  CQ + W++ HK +C PVE
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of Cp4.1LG09g05940 vs. ExPASy Swiss-Prot
Match: Q9SJA1 (Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana OX=3702 GN=UBP19 PE=2 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 5.6e-04
Identity = 20/40 (50.00%), Postives = 24/40 (60.00%), Query Frame = 0


Query: 323 CGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKMDC 363
           CG+  T     ++CS C SV YCS ACQ  DWK  HK+ C
Sbjct: 67  CGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKC 101

[Close]

BLAST of Cp4.1LG09g05940 vs. NCBI nr
Match: XP_023541282.1 (F-box protein At1g67340-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 787 bits (2033), Expect = 1.24e-287
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0


Query: 1   MRTRTGLCYPRLETTLCSDSRHRKRIHDVAADRRRHFCRKRTKLSPQITPPPPPPSDLFD 60
           MRTRTGLCYPRLETTLCSDSRHRKRIHDVAADRRRHFCRKRTKLSPQITPPPPPPSDLFD
Sbjct: 1   MRTRTGLCYPRLETTLCSDSRHRKRIHDVAADRRRHFCRKRTKLSPQITPPPPPPSDLFD 60

Query: 61  SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS 120
           SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS
Sbjct: 61  SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS 120

Query: 121 ESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF 180
           ESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF
Sbjct: 121 ESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF 180

Query: 181 NGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240
           NGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA
Sbjct: 181 NGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240

Query: 241 RELAAVLSSEAGSSVIASRCCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM 300
           RELAAVLSSEAGSSVIASRCCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM
Sbjct: 241 RELAAVLSSEAGSSVIASRCCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM 300

Query: 301 AEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM 360
           AEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM
Sbjct: 301 AEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM 360

Query: 361 DCAPVERWVDDNGDGGADDIMAES 384
           DCAPVERWVDDNGDGGADDIMAES
Sbjct: 361 DCAPVERWVDDNGDGGADDIMAES 384

[Close]

BLAST of Cp4.1LG09g05940 vs. NCBI nr
Match: KAG7012730.1 (F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 769 bits (1987), Expect = 1.19e-280
Identity = 377/384 (98.18%), Postives = 379/384 (98.70%), Query Frame = 0


Query: 1   MRTRTGLCYPRLETTLCSDSRHRKRIHDVAADRRRHFCRKRTKLSPQITPPPPPPSDLFD 60
           MRTRTGLCYPRLETTLCSD+RHRKR HDVAADRRRHFCRKRTKLSPQITPPPP  SD FD
Sbjct: 1   MRTRTGLCYPRLETTLCSDTRHRKRTHDVAADRRRHFCRKRTKLSPQITPPPP--SDFFD 60

Query: 61  SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS 120
            LPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS
Sbjct: 61  FLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS 120

Query: 121 ESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF 180
           ESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF
Sbjct: 121 ESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF 180

Query: 181 NGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240
           NGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA
Sbjct: 181 NGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240

Query: 241 RELAAVLSSEAGSSVIASRCCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM 300
           RELAAVLSSEAGSSVIASRCC+TWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM
Sbjct: 241 RELAAVLSSEAGSSVIASRCCVTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM 300

Query: 301 AEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM 360
           AEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM
Sbjct: 301 AEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM 360

Query: 361 DCAPVERWVDDNGDGGADDIMAES 384
           DCAPVERWVDDNGDGGADDIMAES
Sbjct: 361 DCAPVERWVDDNGDGGADDIMAES 382

[Close]

BLAST of Cp4.1LG09g05940 vs. NCBI nr
Match: XP_022944794.1 (F-box protein At1g67340-like [Cucurbita moschata])

HSP 1 Score: 765 bits (1976), Expect = 5.64e-279
Identity = 374/384 (97.40%), Postives = 379/384 (98.70%), Query Frame = 0


Query: 1   MRTRTGLCYPRLETTLCSDSRHRKRIHDVAADRRRHFCRKRTKLSPQITPPPPPPSDLFD 60
           MRTRTGLCYPRLETTLCSD+RHRKR HDVAADRR HFCRKRTKLSPQITPPPP  SDLFD
Sbjct: 1   MRTRTGLCYPRLETTLCSDTRHRKRTHDVAADRRPHFCRKRTKLSPQITPPPP--SDLFD 60

Query: 61  SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS 120
           SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIP+VLSKASQKTFAIKARNWS
Sbjct: 61  SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPIVLSKASQKTFAIKARNWS 120

Query: 121 ESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF 180
           ESAHRFLKRCSDA N+DASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF
Sbjct: 121 ESAHRFLKRCSDAENIDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF 180

Query: 181 NGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240
           NGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA
Sbjct: 181 NGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240

Query: 241 RELAAVLSSEAGSSVIASRCCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM 300
           RELAAVLSSEAGSSVIASRCC+TWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM
Sbjct: 241 RELAAVLSSEAGSSVIASRCCVTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM 300

Query: 301 AEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM 360
           AEWFGARGESPG+GLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM
Sbjct: 301 AEWFGARGESPGIGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM 360

Query: 361 DCAPVERWVDDNGDGGADDIMAES 384
           DCAPVERWVDDNGDGGADDIMAES
Sbjct: 361 DCAPVERWVDDNGDGGADDIMAES 382

[Close]

BLAST of Cp4.1LG09g05940 vs. NCBI nr
Match: XP_022966805.1 (F-box protein At1g67340-like [Cucurbita maxima])

HSP 1 Score: 764 bits (1973), Expect = 1.68e-278
Identity = 376/384 (97.92%), Postives = 378/384 (98.44%), Query Frame = 0


Query: 1   MRTRTGLCYPRLETTLCSDSRHRKRIHDVAADRRRHFCRKRTKLSPQITPPPPPPSDLFD 60
           MRTRTGLCYPRLETTLCSDS HRKR HDVAADRRRHFCRKRTKLSP ITP PPP SDLFD
Sbjct: 1   MRTRTGLCYPRLETTLCSDSSHRKRNHDVAADRRRHFCRKRTKLSPHITPLPPP-SDLFD 60

Query: 61  SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS 120
           SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS
Sbjct: 61  SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS 120

Query: 121 ESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF 180
           ESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF
Sbjct: 121 ESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF 180

Query: 181 NGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240
           NGSGGSKSDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGVRQNITEGRRFLVQANA
Sbjct: 181 NGSGGSKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240

Query: 241 RELAAVLSSEAGSSVIASRCCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM 300
           RELAAVLSSEAGSSVIASR CLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM
Sbjct: 241 RELAAVLSSEAGSSVIASRSCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM 300

Query: 301 AEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM 360
           AEWFGARGESPG+GLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM
Sbjct: 301 AEWFGARGESPGLGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM 360

Query: 361 DCAPVERWVDDNGDGGADDIMAES 384
           DCAPVERWVDDNGDGGADDIMAES
Sbjct: 361 DCAPVERWVDDNGDGGADDIMAES 383

[Close]

BLAST of Cp4.1LG09g05940 vs. NCBI nr
Match: KAG6573639.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 741 bits (1914), Expect = 3.51e-269
Identity = 372/405 (91.85%), Postives = 377/405 (93.09%), Query Frame = 0


Query: 1   MRTRTGLCYPRLETTLCSDSRHRKRIHDVAADRRRHFCRKRTKLSPQITPPPPPPSDLFD 60
           MRTRTGLCYPRLETTLCSD+RHRKR HDVAADRRRHFCRKRTKLSPQITPPPP  SDLFD
Sbjct: 1   MRTRTGLCYPRLETTLCSDTRHRKRTHDVAADRRRHFCRKRTKLSPQITPPPP--SDLFD 60

Query: 61  SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS 120
           SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS
Sbjct: 61  SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS 120

Query: 121 ESAHRFLKRCSDAGNVDASYTLGMIRF---------------YCLQN------RGSGASL 180
           ESAHRFLKRCSDAGNVDASYTLGM+ +               Y L +       GSGASL
Sbjct: 121 ESAHRFLKRCSDAGNVDASYTLGMVSYIYIYIYIYIYIYISIYILISIYSNFILGSGASL 180

Query: 181 MAKAAICSHAPALYSLAVIQFNGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQ 240
           MAKAAICSHAPALYSLAVIQFNGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQ
Sbjct: 181 MAKAAICSHAPALYSLAVIQFNGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQ 240

Query: 241 DGYGVRQNITEGRRFLVQANARELAAVLSSEAGSSVIASRCCLTWNPHVPHRHVTGSGCP 300
           DGYGVRQNITEGRRFLVQANARELAAVLSSEAGSSVIASRCC+TWNPHVPHRHVTGSGCP
Sbjct: 241 DGYGVRQNITEGRRFLVQANARELAAVLSSEAGSSVIASRCCVTWNPHVPHRHVTGSGCP 300

Query: 301 LLSDFGCNIPAPEAHPVSRFMAEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVC 360
           LLSDFGCNIPAPEAHPVSRFMAEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVC
Sbjct: 301 LLSDFGCNIPAPEAHPVSRFMAEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVC 360

Query: 361 GSVNYCSRACQALDWKLRHKMDCAPVERWVDDNGDGGADDIMAES 384
           GSVNYCSRACQALDWKLRHKMDCAPVERWVDDNGDGGADDIMAES
Sbjct: 361 GSVNYCSRACQALDWKLRHKMDCAPVERWVDDNGDGGADDIMAES 403

[Close]

BLAST of Cp4.1LG09g05940 vs. ExPASy TrEMBL
Match: A0A6J1FZ36 (F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111449223 PE=4 SV=1)

HSP 1 Score: 765 bits (1976), Expect = 2.73e-279
Identity = 374/384 (97.40%), Postives = 379/384 (98.70%), Query Frame = 0


Query: 1   MRTRTGLCYPRLETTLCSDSRHRKRIHDVAADRRRHFCRKRTKLSPQITPPPPPPSDLFD 60
           MRTRTGLCYPRLETTLCSD+RHRKR HDVAADRR HFCRKRTKLSPQITPPPP  SDLFD
Sbjct: 1   MRTRTGLCYPRLETTLCSDTRHRKRTHDVAADRRPHFCRKRTKLSPQITPPPP--SDLFD 60

Query: 61  SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS 120
           SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIP+VLSKASQKTFAIKARNWS
Sbjct: 61  SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPIVLSKASQKTFAIKARNWS 120

Query: 121 ESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF 180
           ESAHRFLKRCSDA N+DASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF
Sbjct: 121 ESAHRFLKRCSDAENIDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF 180

Query: 181 NGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240
           NGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA
Sbjct: 181 NGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240

Query: 241 RELAAVLSSEAGSSVIASRCCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM 300
           RELAAVLSSEAGSSVIASRCC+TWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM
Sbjct: 241 RELAAVLSSEAGSSVIASRCCVTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM 300

Query: 301 AEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM 360
           AEWFGARGESPG+GLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM
Sbjct: 301 AEWFGARGESPGIGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM 360

Query: 361 DCAPVERWVDDNGDGGADDIMAES 384
           DCAPVERWVDDNGDGGADDIMAES
Sbjct: 361 DCAPVERWVDDNGDGGADDIMAES 382

[Close]

BLAST of Cp4.1LG09g05940 vs. ExPASy TrEMBL
Match: A0A6J1HSL8 (F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111466400 PE=4 SV=1)

HSP 1 Score: 764 bits (1973), Expect = 8.12e-279
Identity = 376/384 (97.92%), Postives = 378/384 (98.44%), Query Frame = 0


Query: 1   MRTRTGLCYPRLETTLCSDSRHRKRIHDVAADRRRHFCRKRTKLSPQITPPPPPPSDLFD 60
           MRTRTGLCYPRLETTLCSDS HRKR HDVAADRRRHFCRKRTKLSP ITP PPP SDLFD
Sbjct: 1   MRTRTGLCYPRLETTLCSDSSHRKRNHDVAADRRRHFCRKRTKLSPHITPLPPP-SDLFD 60

Query: 61  SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS 120
           SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS
Sbjct: 61  SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS 120

Query: 121 ESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF 180
           ESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF
Sbjct: 121 ESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF 180

Query: 181 NGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240
           NGSGGSKSDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGVRQNITEGRRFLVQANA
Sbjct: 181 NGSGGSKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240

Query: 241 RELAAVLSSEAGSSVIASRCCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM 300
           RELAAVLSSEAGSSVIASR CLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM
Sbjct: 241 RELAAVLSSEAGSSVIASRSCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM 300

Query: 301 AEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM 360
           AEWFGARGESPG+GLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM
Sbjct: 301 AEWFGARGESPGLGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM 360

Query: 361 DCAPVERWVDDNGDGGADDIMAES 384
           DCAPVERWVDDNGDGGADDIMAES
Sbjct: 361 DCAPVERWVDDNGDGGADDIMAES 383

[Close]

BLAST of Cp4.1LG09g05940 vs. ExPASy TrEMBL
Match: A0A6J1GZ25 (F-box protein At1g67340 OS=Cucurbita moschata OX=3662 GN=LOC111458825 PE=4 SV=1)

HSP 1 Score: 654 bits (1688), Expect = 2.27e-235
Identity = 327/387 (84.50%), Postives = 345/387 (89.15%), Query Frame = 0


Query: 1   MRTRTGLCYPRLETTLCSDSRHRKRIHDVAADRRRHFCRKRTKLSPQITPPPPPPSDLFD 60
           MRTR GLCYPRL+    SD+R RKR HD AAD  R FCRKR K SP I  P    SDLFD
Sbjct: 1   MRTRRGLCYPRLQPPFFSDNRVRKRTHDAAADADRQFCRKRNKPSPDIKTPT---SDLFD 60

Query: 61  SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS 120
           SLPDDLVISILSKLSSAASSPS+FINILLTCKRLN+LGL P+VLS+AS K FAI ARNW+
Sbjct: 61  SLPDDLVISILSKLSSAASSPSEFINILLTCKRLNSLGLNPVVLSRASLKIFAISARNWT 120

Query: 121 ESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF 180
           ESAHRFLK+CSDAGNV+A YTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQF
Sbjct: 121 ESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQF 180

Query: 181 NGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240
           NGSGGSK+DK+L AGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA
Sbjct: 181 NGSGGSKNDKNLGAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240

Query: 241 RELAAVLSSEAGSSVIASRCCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM 300
           RELAAVLSSEAGSSV ASR CLTWNPH  HRHVTGS CPLLSDFGCNIPAPE HP S+F+
Sbjct: 241 RELAAVLSSEAGSSVAASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEVHPASQFL 300

Query: 301 AEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM 360
           AEWF ARG SPG GLR+CSHVGCGRPETR+HEFRRCSVCG+VNYCSRACQALDWKLRHKM
Sbjct: 301 AEWFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKM 360

Query: 361 DCAPVERWVDDNGDGGAD---DIMAES 384
           DC PVERW+DDNGDGGAD   D+M ES
Sbjct: 361 DCVPVERWLDDNGDGGADGVDDMMDES 384

[Close]

BLAST of Cp4.1LG09g05940 vs. ExPASy TrEMBL
Match: A0A6J1KDE5 (F-box protein At1g67340 OS=Cucurbita maxima OX=3661 GN=LOC111492842 PE=4 SV=1)

HSP 1 Score: 652 bits (1683), Expect = 1.22e-234
Identity = 326/387 (84.24%), Postives = 346/387 (89.41%), Query Frame = 0


Query: 1   MRTRTGLCYPRLETTLCSDSRHRKRIHDVAADRRRHFCRKRTKLSPQITPPPPPPSDLFD 60
           MRTR GLCYPRL+    SD+R RKR HD +ADR  HFCRKR KLSP I  P    SDLFD
Sbjct: 1   MRTRRGLCYPRLDAAFFSDNRVRKRTHDASADR--HFCRKRNKLSPDIKTPT---SDLFD 60

Query: 61  SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS 120
           SLPDDLVISILSKL +AASS S+FINILLTCKRLN+LGL P+VLS+AS K FAI ARNW+
Sbjct: 61  SLPDDLVISILSKLGAAASSSSEFINILLTCKRLNSLGLNPIVLSRASLKIFAISARNWT 120

Query: 121 ESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF 180
           ESAHRFLK+C+DAGNV+A YTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF
Sbjct: 121 ESAHRFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF 180

Query: 181 NGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240
           NGSGGSK+DK LRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA
Sbjct: 181 NGSGGSKNDKILRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240

Query: 241 RELAAVLSSEAGSSVIASRCCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFM 300
           RELAAVLSSEAGSSV ASR  LTWNPH  HRHVTGS CPLLSDFGCNIPAPEAHP S+F+
Sbjct: 241 RELAAVLSSEAGSSVTASRTFLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFL 300

Query: 301 AEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKM 360
           AEWF ARG SPG GLR+CSHVGCGRPETR+HEFRRCSVCG+VNYCSRACQALDWKLRHKM
Sbjct: 301 AEWFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKM 360

Query: 361 DCAPVERWVDDNGDGGAD---DIMAES 384
           DC PVERW+DDNGDGGAD   D+M ES
Sbjct: 361 DCVPVERWLDDNGDGGADGVVDMMDES 382

[Close]

BLAST of Cp4.1LG09g05940 vs. ExPASy TrEMBL
Match: A0A0A0KTC5 (MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589890 PE=4 SV=1)

HSP 1 Score: 644 bits (1660), Expect = 3.87e-231
Identity = 330/388 (85.05%), Postives = 348/388 (89.69%), Query Frame = 0


Query: 1   MRTRTGLCYPRLETTLCSDSRHRKRIHDVAADRRRHFCRKRTKLSPQITPPPPPPSDLFD 60
           MRTRTGL YP L+ T  + S +RKR H VAADR   FCRKR KLS  I  P    SDLFD
Sbjct: 1   MRTRTGLSYPPLQPTAFA-SGNRKRKHHVAADR--PFCRKRNKLSYHIKTPT---SDLFD 60

Query: 61  SLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWS 120
           SLPDDLVI+ILS LSSAASSPSDFINILLTCKRLNNLGL PMVLS+ASQKTFAI+A+NW+
Sbjct: 61  SLPDDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWT 120

Query: 121 ESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF 180
           ESAHRFLK+CSDAGNV+A YTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF
Sbjct: 121 ESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQF 180

Query: 181 NGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240
           NGSGGSK+DKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA
Sbjct: 181 NGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANA 240

Query: 241 RELAAVLSSEAGSSVIASRCCLTWNPHVPH-RHVTGSGCPLLSDFGCNIPAPEAHPVSRF 300
           RELAAVLSSEA SSV ASR CLTWN   PH RHVTGSGCPLLSDFGCNIPAPEAHP S+F
Sbjct: 241 RELAAVLSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQF 300

Query: 301 MAEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHK 360
           +AEWF ARG SPG GLR+CSHVGCGRPETR+HEFRRCSVCG+VNYCSRACQALDWKLRHK
Sbjct: 301 LAEWFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHK 360

Query: 361 MDCAPVERWVDDNGDGG---ADDIMAES 384
           +DCAPVERW+DDNGDG    ADDIM ES
Sbjct: 361 IDCAPVERWLDDNGDGMDDVADDIMDES 382

[Close]

BLAST of Cp4.1LG09g05940 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 488.4 bits (1256), Expect = 5.2e-138
Identity = 248/369 (67.21%), Postives = 289/369 (78.32%), Query Frame = 0


Query: 20  SRHRKRIH--DVAADRRRHFCRKRTKLSPQITPPP--PPPSDLFDSLPDDLVISILSKLS 79
           SR  KR+   D    R+R  C     +   ++P P     +DL DS+PDDLVISIL KL 
Sbjct: 4   SRKTKRVFSCDFTPGRKRRRC---VVVPSSVSPVPENTTGADLLDSIPDDLVISILCKLG 63

Query: 80  SAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARNWSESAHRFLKRCSDAGN 139
           S +  P+DFIN+LLTCKRL  L + P+VLS+ S K  A+KA NWSE +HRFLKRC DAG+
Sbjct: 64  STSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVKAHNWSEYSHRFLKRCVDAGS 123

Query: 140 VDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGSKSDKDLRAG 199
           ++A YTLGMIRFYCLQNRG+GASLMAKAAI SHAPALYSLAVIQFNGSGGSK+DKDLRAG
Sbjct: 124 LEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAG 183

Query: 200 VALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAVLSSEAGSSV 259
           VALCARAAFLGH+DALRELGHCLQDGYGV QN++EGRRFLVQANARELAAVLSS  G   
Sbjct: 184 VALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFLVQANARELAAVLSS--GIQA 243

Query: 260 IASRCCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSRFMAEWFGAR-GESPGVG 319
            ++   L+  P     +     CPLLSDFGCN+PAPE HP +RF+A+WF  R G+ PG G
Sbjct: 244 RSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDG 303

Query: 320 LRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKMDCAPVERWVDDNGD 379
           LR+CSH GCGRPETR+HEFRRCSVCG VNYCSRACQALDWKLRHKMDCAPV+RW+++ GD
Sbjct: 304 LRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKLRHKMDCAPVQRWLEE-GD 363

Query: 380 GGADDIMAE 384
           GG  ++  +
Sbjct: 364 GGEGNVQID 366

[Close]

BLAST of Cp4.1LG09g05940 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-111
Identity = 199/320 (62.19%), Postives = 239/320 (74.69%), Query Frame = 0


Query: 59  FDSLPDDLVISILSKLSSAASSPSDFINILLTCKRLNNLGLIPMVLSKASQKTFAIKARN 118
           F+ L DDL+ISIL KL+++ASSPSDF+ +L TCKRLN LGL P+VLSKA  +T A+ A  
Sbjct: 22  FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81

Query: 119 WSESAHRFLKRCSDAGNVDASYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVI 178
           WS+S+H+FLK C +AGN+DASY+LGMIRFYCLQN  SGASLMAKAAI SHAPALYSL+VI
Sbjct: 82  WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

Query: 179 QFNGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQA 238
           QFNGSGGSK+DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGYGV ++++EGRR L+QA
Sbjct: 142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201

Query: 239 NARELAAVLSSEAGSSVIASRCCLTWNPHVPHRHVTGSGCPLLSDFGCNIPAPEAHPVSR 298
           NARELA  L S                        +G     L+D    +P  E HPV+R
Sbjct: 202 NARELACSLRSYLSLK-------------------SGDENETLTDLSV-VPVQEIHPVNR 261

Query: 299 FMAEWFGARGESPGVGLRMCSHVGCGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRH 358
           F+ EWF +       GLRMCSH GCGRPETR HEFRRCSVCG VNYCSR CQALDW+ +H
Sbjct: 262 FLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKH 321

Query: 359 KMDCAPVERWVDDNGDGGAD 379
           K++C P++ WV    + G D
Sbjct: 322 KVECTPLDLWVAAAAEIGDD 321

[Close]

BLAST of Cp4.1LG09g05940 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 48.1 bits (113), Expect = 1.8e-05
Identity = 18/32 (56.25%), Postives = 22/32 (68.75%), Query Frame = 0


Query: 335 RCSVCGSVNYCSRACQALDWKLRHKMDCAPVE 367
           RCS C SV YCS  CQ + W++ HK +C PVE
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of Cp4.1LG09g05940 vs. TAIR 10
Match: AT1G17110.2 (ubiquitin-specific protease 15 )

HSP 1 Score: 48.1 bits (113), Expect = 1.8e-05
Identity = 18/32 (56.25%), Postives = 22/32 (68.75%), Query Frame = 0


Query: 335 RCSVCGSVNYCSRACQALDWKLRHKMDCAPVE 367
           RCS C SV YCS  CQ + W++ HK +C PVE
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of Cp4.1LG09g05940 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 47.0 bits (110), Expect = 4.0e-05
Identity = 20/40 (50.00%), Postives = 24/40 (60.00%), Query Frame = 0


Query: 323 CGRPETRQHEFRRCSVCGSVNYCSRACQALDWKLRHKMDC 363
           CG+  T     ++CS C SV YCS ACQ  DWK  HK+ C
Sbjct: 67  CGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKC 101

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g05940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	7.3e-137	67.21	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	1.5e-110	62.19	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
Q2YDC9	1.9e-04	39.62	Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1	[more]
Q9FPS9	2.5e-04	56.25	Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP1...	[more]
Q9SJA1	5.6e-04	50.00	Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana OX=3702 GN=UBP1...	[more]

BLAST of Cp4.1LG09g05940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541282.1	1.24e-287	100.00	F-box protein At1g67340-like [Cucurbita pepo subsp. pepo]	[more]
KAG7012730.1	1.19e-280	98.18	F-box protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022944794.1	5.64e-279	97.40	F-box protein At1g67340-like [Cucurbita moschata]	[more]
XP_022966805.1	1.68e-278	97.92	F-box protein At1g67340-like [Cucurbita maxima]	[more]
KAG6573639.1	3.51e-269	91.85	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG09g05940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZ36	2.73e-279	97.40	F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111449223 PE=4 ...	[more]
A0A6J1HSL8	8.12e-279	97.92	F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111466400 PE=4 SV...	[more]
A0A6J1GZ25	2.27e-235	84.50	F-box protein At1g67340 OS=Cucurbita moschata OX=3662 GN=LOC111458825 PE=4 SV=1	[more]
A0A6J1KDE5	1.22e-234	84.24	F-box protein At1g67340 OS=Cucurbita maxima OX=3661 GN=LOC111492842 PE=4 SV=1	[more]
A0A0A0KTC5	3.87e-231	85.05	MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589890 P...	[more]

BLAST of Cp4.1LG09g05940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	5.2e-138	67.21	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	1.1e-111	62.19	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT1G17110.1	1.8e-05	56.25	ubiquitin-specific protease 15	[more]
AT1G17110.2	1.8e-05	56.25	ubiquitin-specific protease 15	[more]
AT2G24640.1	4.0e-05	50.00	ubiquitin-specific protease 19	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.140.2220		coord: 312..367 e-value: 1.5E-10 score: 42.6
None	No IPR available	PANTHER	PTHR46758:SF2	OSJNBA0044M19.1 PROTEIN	coord: 1..376
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 120..238
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 316..367
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 323..362 e-value: 6.7E-8 score: 32.5
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 320..362 score: 10.937226
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 100..255 e-value: 6.7E-17 score: 64.1
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 1..376
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 51..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g05940.1	Cp4.1LG09g05940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding