Cp4.1LG09g05790 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG09g05790
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptioncleavage and polyadenylation specificity factor subunit 3-I-like
LocationCp4.1LG09: 4239934 .. 4244106 (+)
RNA-Seq ExpressionCp4.1LG09g05790
SyntenyCp4.1LG09g05790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTGGGTTCGACTCCCACTGTGGTCGTCGTTTTTTCTTAGATTTTTCATTTATTCCCTCCCCTCTCCCGCGTTCTTCCCGTTAAGCTTCTTCAGTCGTTTCTAAAACCCACCAAATAGAAAGACGCAGTTTTTGGATAAACTAGGGTTTACCTCTCTTTCTTCCCCGATTCAATCACTGTAAGTTCTCTCTTTCTCAAATTTCATTTTCTCATTCTCCTCAACACTTTCAATTTAATGCCTGCTGCTCATCTTTCTCTCTCGCTGTTCCTCGCTTTTCGAGTTTTTTCAGATCTGTTATTGATTCTGATGCACACTTCCCCCTTCCCTGTTTGATTTCCTACGGAAACACAACTGATATCGATGCTGTATGAATAACTTTATGCTAGTTTTGTTGTTTTTTTTTTTTTTTTTTTTTTTGGAATTATAAGATTGAAGCATGAATTCCATCTCCAGTGACTCTCTGCTAGGTCTTGTTGATACTGTTCGCATGAAATTCAAAATTTCTTTCCGTTCTTCATATGTTGCAGTTGTAAAGATCTTGGGTGAGCATTTGCCGTTTGAGGAAAAATGGCTTCGGTTGGGCCGTCGCCCTCCCTTAAGAAACGGGAGTCGTCCGCGACGAGAGAGGAGGATCAGCTTATTATAACTCCTCTTGGGGCTGGCAATGAAGTGGGTCGGTCCTGCGTTTATATGTCTTACAAAGGCAAAATTGTGTTGGTATGCTTTGAATTCTTCATATTTTCCCAAGTATCTGGGTATTATGTACAGAATTACAATTGTTTAATCGGTATTCTTCTGTCCCCTTCACTTTTGTTGGATGATAGTTTGATTGTGGAATTCACCCCGCTTACTCTGGCATGGCTGCTTTGCCTTACTTCGATGAAATCGACCCGTCAACAATTGATGTCCTGCTCATTACCCAGTATGTAGTTCTCTCGTTCTATCTTTCTGAAATGCAGCTTATAACTCAAATGTTTGCATTTTAATATTCTGTTTTAGAAAAATTAGCGAATGACAGTGGATGGTTATTTGTTGTGGCACTTGAGCATGATTTTTGGTTACTGCTTAAAATCTTTGCCCTTAATGATAAAAGCCTTTATTTTCTGATCTCATTTTTTCTCGATACGTGTTCTGCATTTTGTTAAAACTGATGTCTCGTAATAAAAGTCGATGTCTTTGTGAGCATGGAAAACAGAAATATACGTGAGGAGAATGGCAGTTCCCTACTGTTTCTCTCTTTAGCTGTTCCTGACATGAGATTCTAATTGTCCCTGCTTTCTCTATTTTCTTCCTTTTCTTTTGTGTTCTGTTAACTAAGATGATTTTATGCACACTTGTTTGCAGCTTTCATTTGGATCACGCTGCATCACTCCCTTATTTTTTGGAGAAGGTACATTACTTTCTAATTGAATTGCAATGTGATTCCTAAGTACAGAAACTGATTTAGTTTTAGTATGATAGACTACATTCAAAGGGCGAGTCTTTATGACTTATGCTACAAAAGCAATCTACAAGTTGTTGCTGTCAGACTTTGTGAAAGTGAGCAAAGTGTCCATTGAAGATATGTTGTACGATGAGCAGGACATAAATCGTTCCATGGACAAAATTGAGGTAAACGATTTCTCATAATGGATGTCTCCTGGCTTGCTGTTTAATCCATGGTGATAAATATGTATCAAATTTGTTGATAGGAAATTTTAGTGATTCTACCAAACTCATACCTTCTAATAGAAATTTACTTGACGTTTTATTTGGAAATAGTATTTTCCTCCCTCACTATCTATGATCCCTTATCCCCTTCTGTTGTAGTTCTTTGTTAATTTTTTTTTCCATTAAAATGCTCGAACTCTGTTCTTATAGTTTTCAGCATAAAAAAATAATTGAATTTGTTTTAATCATGCATTTTTCTCTGATTTTCTGAATAAAGTATATAATGATTTAATGTTATATTTCTAAAATTAACTTGTATAAGAAACAAATAGAAACAGAACAATTGACTACCCTTCCATATAGTTTTTGAAGTTAAAAACAATGGAAATGCATATAGTTCTTAAAACAATTTCCGGAAAGAGAAAACCTATGCAGTCCTCAAGCTTGCTAAATGATTCCCCAGAAGCTTCTTATTGAAGGAAAATTAAAATAAAAAAGATACCTGTATGATAATTGTGTTACTGACCTCCTTGATTATAATAATATCAATGAACAATCTGTAACGATATGCAGATTGTTTTATTGTTGTCAACTTGCATAAATTTGCAATGATGAAAACGAACTTCAGTTCTTCTCTTGTTCAATAATAGTGCACAGTAATTGCAGGTCATTGATTTCCATCAAACAGTAGAAGTAAATGGTATTCGGTTTTGGTGTTACACTGCTGGTCATGTGCTTGGTGCTGCCATGTTTATGGTAGATATTGCTGGTGTCCGAGTCCTCTACACTGGAGACTATTCACGTGAAGAAGACCGACATCTTCGAGCTGCTGAAATGCCTCAATTTTCTCCTGATGTTTGCATAATTGAATCTACATATGGTGTCCAGCTCCATCAACCTCGGCATATTCGAGAAAAGCGCTTCACTGATGTTGTACATTCAACCATTTCTCAAGGTGGTCGTGTGCTGATTCCAGCTTTTGCCCTTGGACGTGCCCAGGAACTCCTCCTTATTCTTGATGAGTATTGGGCAAACCATCCAGAGCTCCATAATGTTCCCATATATTATGCTTCTCCTCTGGCAAAAAGATGTTTGACCGTATACGAGACGTACACACTTTCCATGAACGATAGGATCCAAAATGCCAAATCTAACCCCTTCAGATTCAAGTACATATCCCCACTAAAGAGCATTGAAGTTTTTAAGGATGTTGGCCCATCAGTGGTGATGGCCAGTCCTGGTGGCCTTCAGAGTGGTTTGTCCCGACAACTCTTTGACCTGTGGTGTTCTGATAAGAAGAACTCATGTGTGCTTCCTGGTTATGTCGTTGAAGGGACACTGGCTAAGACTATAATCAATGAACCAAAGGAAGTCACCCTCATGAGCGGACTTATGGCTCCTCTTAACATGCAGGTTCATTACATTTCCTTCTCTGCTCATGCCGACTATGCACAGACCAGCGCGTTCTTGGAAGAGCTCATGCCGCCCAACATAATTCTTGTCCATGGAGAAGCTAATGAGATGGGAAGGCTCAAACAGAAGCTTATGTCCAAGTTTGCTGATCGTAACACCAAGATTCTTACTCCAAAGAATTGTCAATCTGTTGAAATGTACTTCAACTCCCAGAAGATGGCAAAAACTATCGGAAAATTGGCCGAGAACACCCCTGAAGTCGATGAAACGGTCAGCGGATTACTGGTGAAGAAAGGATTTGCTTATCAGATAATGGCACCAGATGATCTACACATCTTCTCCCAGCTATCAACTGCAAACATCTACCAGCGTATCACGATTCCGTACACCAACGCCTTCAATGTGATTGTACGTCGGCTCAAACAGGTATATGAAAGTGTAGAATCGTCAACAGACGAAGAATCTGGTGTCCCAACAGTTCGTGTGCACGATCGTGTGACAGTGAAGCACGAGTCGGAGAGACATGTCTCACTTCACTGGACATCAGACCCGTTAAGCGACATGGTATCGGATTCAGTTGTAGCTCTCATTCTGAACATCAACCGGGAAGTTCCGAAAGTCATTGTGGAGTCGGAGGCCGTGAAAACGGAAGAGGAGAACGAGAAGAAAGCAGAGAAGGTAATTCATGCTCTCCTTGTTTCACTTTTTGGCGATGTAAAGTTGGGAGAGAATGGGAAGCTGGTAGTTAACGTTGATGGGAGTATAGCAGAGGTTGATAAACAGAGTGGGGAGGTAGAAAGTGAAAATGAAGCTCTGAAAGAAAGAGTAAAAACAGCATTCCTGCGAATCCAAAGTGCAGTGAAGCCAATTCCTCTCTCTGCACCATAAGCCTTTTTCTTCTATGTGTGGCCATTGTACAAGTAGAACCAACTGATTTGGTGGATCCTTCTTCATCATTTCCTCTACTGGAAGGATTGTTTATTATTGAACATTAAATTAAAAGTTTGAGCTGAGCCCATGGAATTATTACAACTCACCGTGTATTGACCCAAACGTCTTTTCTCGGTTTCTGTTTCTCATTCTTAACATATATATATATATAGTTTGTT

mRNA sequence

CGTGGGTTCGACTCCCACTGTGGTCGTCGTTTTTTCTTAGATTTTTCATTTATTCCCTCCCCTCTCCCGCGTTCTTCCCGTTAAGCTTCTTCAGTCGTTTCTAAAACCCACCAAATAGAAAGACGCAGTTTTTGGATAAACTAGGGTTTACCTCTCTTTCTTCCCCGATTCAATCACTTTGTAAAGATCTTGGGTGAGCATTTGCCGTTTGAGGAAAAATGGCTTCGGTTGGGCCGTCGCCCTCCCTTAAGAAACGGGAGTCGTCCGCGACGAGAGAGGAGGATCAGCTTATTATAACTCCTCTTGGGGCTGGCAATGAAGTGGGTCGGTCCTGCGTTTATATGTCTTACAAAGGCAAAATTGTGTTGTTTGATTGTGGAATTCACCCCGCTTACTCTGGCATGGCTGCTTTGCCTTACTTCGATGAAATCGACCCGTCAACAATTGATGTCCTGCTCATTACCCACTTTCATTTGGATCACGCTGCATCACTCCCTTATTTTTTGGAGAAGACTACATTCAAAGGGCGAGTCTTTATGACTTATGCTACAAAAGCAATCTACAAGTTGTTGCTGTCAGACTTTGTGAAAGTGAGCAAAGTGTCCATTGAAGATATGTTGTACGATGAGCAGGACATAAATCGTTCCATGGACAAAATTGAGGTCATTGATTTCCATCAAACAGTAGAAGTAAATGGTATTCGGTTTTGGTGTTACACTGCTGGTCATGTGCTTGGTGCTGCCATGTTTATGGTAGATATTGCTGGTGTCCGAGTCCTCTACACTGGAGACTATTCACGTGAAGAAGACCGACATCTTCGAGCTGCTGAAATGCCTCAATTTTCTCCTGATGTTTGCATAATTGAATCTACATATGGTGTCCAGCTCCATCAACCTCGGCATATTCGAGAAAAGCGCTTCACTGATGTTGTACATTCAACCATTTCTCAAGGTGGTCGTGTGCTGATTCCAGCTTTTGCCCTTGGACGTGCCCAGGAACTCCTCCTTATTCTTGATGAGTATTGGGCAAACCATCCAGAGCTCCATAATGTTCCCATATATTATGCTTCTCCTCTGGCAAAAAGATGTTTGACCGTATACGAGACGTACACACTTTCCATGAACGATAGGATCCAAAATGCCAAATCTAACCCCTTCAGATTCAAGTACATATCCCCACTAAAGAGCATTGAAGTTTTTAAGGATGTTGGCCCATCAGTGGTGATGGCCAGTCCTGGTGGCCTTCAGAGTGGTTTGTCCCGACAACTCTTTGACCTGTGGTGTTCTGATAAGAAGAACTCATGTGTGCTTCCTGGTTATGTCGTTGAAGGGACACTGGCTAAGACTATAATCAATGAACCAAAGGAAGTCACCCTCATGAGCGGACTTATGGCTCCTCTTAACATGCAGGTTCATTACATTTCCTTCTCTGCTCATGCCGACTATGCACAGACCAGCGCGTTCTTGGAAGAGCTCATGCCGCCCAACATAATTCTTGTCCATGGAGAAGCTAATGAGATGGGAAGGCTCAAACAGAAGCTTATGTCCAAGTTTGCTGATCGTAACACCAAGATTCTTACTCCAAAGAATTGTCAATCTGTTGAAATGTACTTCAACTCCCAGAAGATGGCAAAAACTATCGGAAAATTGGCCGAGAACACCCCTGAAGTCGATGAAACGGTCAGCGGATTACTGGTGAAGAAAGGATTTGCTTATCAGATAATGGCACCAGATGATCTACACATCTTCTCCCAGCTATCAACTGCAAACATCTACCAGCGTATCACGATTCCGTACACCAACGCCTTCAATGTGATTGTACGTCGGCTCAAACAGGTATATGAAAGTGTAGAATCGTCAACAGACGAAGAATCTGGTGTCCCAACAGTTCGTGTGCACGATCGTGTGACAGTGAAGCACGAGTCGGAGAGACATGTCTCACTTCACTGGACATCAGACCCGTTAAGCGACATGGTATCGGATTCAGTTGTAGCTCTCATTCTGAACATCAACCGGGAAGTTCCGAAAGTCATTGTGGAGTCGGAGGCCGTGAAAACGGAAGAGGAGAACGAGAAGAAAGCAGAGAAGGTAATTCATGCTCTCCTTGTTTCACTTTTTGGCGATGTAAAGTTGGGAGAGAATGGGAAGCTGGTAGTTAACGTTGATGGGAGTATAGCAGAGGTTGATAAACAGAGTGGGGAGGTAGAAAGTGAAAATGAAGCTCTGAAAGAAAGAGTAAAAACAGCATTCCTGCGAATCCAAAGTGCAGTGAAGCCAATTCCTCTCTCTGCACCATAAGCCTTTTTCTTCTATGTGTGGCCATTGTACAAGTAGAACCAACTGATTTGGTGGATCCTTCTTCATCATTTCCTCTACTGGAAGGATTGTTTATTATTGAACATTAAATTAAAAGTTTGAGCTGAGCCCATGGAATTATTACAACTCACCGTGTATTGACCCAAACGTCTTTTCTCGGTTTCTGTTTCTCATTCTTAACATATATATATATATAGTTTGTT

Coding sequence (CDS)

ATGGCTTCGGTTGGGCCGTCGCCCTCCCTTAAGAAACGGGAGTCGTCCGCGACGAGAGAGGAGGATCAGCTTATTATAACTCCTCTTGGGGCTGGCAATGAAGTGGGTCGGTCCTGCGTTTATATGTCTTACAAAGGCAAAATTGTGTTGTTTGATTGTGGAATTCACCCCGCTTACTCTGGCATGGCTGCTTTGCCTTACTTCGATGAAATCGACCCGTCAACAATTGATGTCCTGCTCATTACCCACTTTCATTTGGATCACGCTGCATCACTCCCTTATTTTTTGGAGAAGACTACATTCAAAGGGCGAGTCTTTATGACTTATGCTACAAAAGCAATCTACAAGTTGTTGCTGTCAGACTTTGTGAAAGTGAGCAAAGTGTCCATTGAAGATATGTTGTACGATGAGCAGGACATAAATCGTTCCATGGACAAAATTGAGGTCATTGATTTCCATCAAACAGTAGAAGTAAATGGTATTCGGTTTTGGTGTTACACTGCTGGTCATGTGCTTGGTGCTGCCATGTTTATGGTAGATATTGCTGGTGTCCGAGTCCTCTACACTGGAGACTATTCACGTGAAGAAGACCGACATCTTCGAGCTGCTGAAATGCCTCAATTTTCTCCTGATGTTTGCATAATTGAATCTACATATGGTGTCCAGCTCCATCAACCTCGGCATATTCGAGAAAAGCGCTTCACTGATGTTGTACATTCAACCATTTCTCAAGGTGGTCGTGTGCTGATTCCAGCTTTTGCCCTTGGACGTGCCCAGGAACTCCTCCTTATTCTTGATGAGTATTGGGCAAACCATCCAGAGCTCCATAATGTTCCCATATATTATGCTTCTCCTCTGGCAAAAAGATGTTTGACCGTATACGAGACGTACACACTTTCCATGAACGATAGGATCCAAAATGCCAAATCTAACCCCTTCAGATTCAAGTACATATCCCCACTAAAGAGCATTGAAGTTTTTAAGGATGTTGGCCCATCAGTGGTGATGGCCAGTCCTGGTGGCCTTCAGAGTGGTTTGTCCCGACAACTCTTTGACCTGTGGTGTTCTGATAAGAAGAACTCATGTGTGCTTCCTGGTTATGTCGTTGAAGGGACACTGGCTAAGACTATAATCAATGAACCAAAGGAAGTCACCCTCATGAGCGGACTTATGGCTCCTCTTAACATGCAGGTTCATTACATTTCCTTCTCTGCTCATGCCGACTATGCACAGACCAGCGCGTTCTTGGAAGAGCTCATGCCGCCCAACATAATTCTTGTCCATGGAGAAGCTAATGAGATGGGAAGGCTCAAACAGAAGCTTATGTCCAAGTTTGCTGATCGTAACACCAAGATTCTTACTCCAAAGAATTGTCAATCTGTTGAAATGTACTTCAACTCCCAGAAGATGGCAAAAACTATCGGAAAATTGGCCGAGAACACCCCTGAAGTCGATGAAACGGTCAGCGGATTACTGGTGAAGAAAGGATTTGCTTATCAGATAATGGCACCAGATGATCTACACATCTTCTCCCAGCTATCAACTGCAAACATCTACCAGCGTATCACGATTCCGTACACCAACGCCTTCAATGTGATTGTACGTCGGCTCAAACAGGTATATGAAAGTGTAGAATCGTCAACAGACGAAGAATCTGGTGTCCCAACAGTTCGTGTGCACGATCGTGTGACAGTGAAGCACGAGTCGGAGAGACATGTCTCACTTCACTGGACATCAGACCCGTTAAGCGACATGGTATCGGATTCAGTTGTAGCTCTCATTCTGAACATCAACCGGGAAGTTCCGAAAGTCATTGTGGAGTCGGAGGCCGTGAAAACGGAAGAGGAGAACGAGAAGAAAGCAGAGAAGGTAATTCATGCTCTCCTTGTTTCACTTTTTGGCGATGTAAAGTTGGGAGAGAATGGGAAGCTGGTAGTTAACGTTGATGGGAGTATAGCAGAGGTTGATAAACAGAGTGGGGAGGTAGAAAGTGAAAATGAAGCTCTGAAAGAAAGAGTAAAAACAGCATTCCTGCGAATCCAAAGTGCAGTGAAGCCAATTCCTCTCTCTGCACCATAA

Protein sequence

MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLSMNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKNSCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELMPPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAENTPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQVYESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINREVPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSGEVESENEALKERVKTAFLRIQSAVKPIPLSAP
Homology
[Close]
BLAST of Cp4.1LG09g05790 vs. ExPASy Swiss-Prot
Match: Q9C952 (Cleavage and polyadenylation specificity factor subunit 3-I OS=Arabidopsis thaliana OX=3702 GN=CPSF73-I PE=1 SV=1)

HSP 1 Score: 1154.4 bits (2985), Expect = 0.0e+00
Identity = 561/688 (81.54%), Postives = 641/688 (93.17%), Query Frame = 0 

Query: 7   SPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALP 66
           S SLK+RE   +R+ DQLI+TPLGAG+EVGRSCVYMS++GK +LFDCGIHPAYSGMAALP
Sbjct: 5   STSLKRREQPISRDGDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMAALP 64

Query: 67  YFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVS 126
           YFDEIDPS+IDVLLITHFH+DHAASLPYFLEKTTF GRVFMT+ATKAIYKLLL+D+VKVS
Sbjct: 65  YFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVS 124

Query: 127 KVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRV 186
           KVS+EDML+DEQDIN+SMDKIEVIDFHQTVEVNGI+FWCYTAGHVLGAAMFMVDIAGVR+
Sbjct: 125 KVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRI 184

Query: 187 LYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGG 246
           LYTGDYSREEDRHLRAAE+PQFSPD+CIIEST GVQLHQ RHIREKRFTDV+HST++QGG
Sbjct: 185 LYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVAQGG 244

Query: 247 RVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLSMNDRIQ 306
           RVLIPAFALGRAQELLLILDEYWANHP+LHN+PIYYASPLAK+C+ VY+TY LSMNDRI+
Sbjct: 245 RVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMNDRIR 304

Query: 307 N--AKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKNSCVL 366
           N  A SNPF FK+ISPL SI+ F DVGPSVVMA+PGGLQSGLSRQLFD WCSDKKN+C++
Sbjct: 305 NQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNACII 364

Query: 367 PGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELMPPNI 426
           PGY+VEGTLAKTIINEPKEVTLM+GL APLNMQVHYISFSAHADYAQTS FL+ELMPPNI
Sbjct: 365 PGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNI 424

Query: 427 ILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAENTPEV 486
           ILVHGEANEM RLKQKL+++F D NTKI+TPKNC+SVEMYFNS+K+AKTIG+LAE TP+V
Sbjct: 425 ILVHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAEKTPDV 484

Query: 487 DETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQVYESV 546
            +TVSG+LVKKGF YQIMAPD+LH+FSQLSTA + QRITIP+  AF VI  RL++++ESV
Sbjct: 485 GDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITIPFVGAFGVIKHRLEKIFESV 544

Query: 547 ESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINREVPKV 606
           E STDEESG+P ++VH+RVTVK ESE+H+SL W+SDP+SDMVSDS+VALILNI+REVPK+
Sbjct: 545 EFSTDEESGLPALKVHERVTVKQESEKHISLQWSSDPISDMVSDSIVALILNISREVPKI 604

Query: 607 IVESE-AVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSGEVE 666
           ++E E AVK+EEEN KK EKVI+ALLVSLFGDVKLGENGKLV+ VDG++A++DK+SGEVE
Sbjct: 605 VMEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDGNVAQLDKESGEVE 664

Query: 667 SENEALKERVKTAFLRIQSAVKPIPLSA 692
           SE+  LKERV+ AF RIQSAVKPIPLSA
Sbjct: 665 SEHSGLKERVRVAFERIQSAVKPIPLSA 692

[Close]
BLAST of Cp4.1LG09g05790 vs. ExPASy Swiss-Prot
Match: P79101 (Cleavage and polyadenylation specificity factor subunit 3 OS=Bos taurus OX=9913 GN=CPSF3 PE=1 SV=1)

HSP 1 Score: 702.2 bits (1811), Expect = 5.8e-201
Identity = 356/682 (52.20%), Postives = 481/682 (70.53%), Query Frame = 0 

Query: 20  EEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYFDEIDPSTIDVL 79
           E DQL+I PLGAG EVGRSC+ + +KG+ ++ DCGIHP   GM ALPY D IDP+ ID+L
Sbjct: 8   ESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLL 67

Query: 80  LITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVSKVSIEDMLYDEQD 139
           LI+HFHLDH  +LP+FL+KT+FKGR FMT+ATKAIY+ LLSD+VKVS +S +DMLY E D
Sbjct: 68  LISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETD 127

Query: 140 INRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRH 199
           +  SMDKIE I+FH+  EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR+EDRH
Sbjct: 128 LEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRH 187

Query: 200 LRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGGRVLIPAFALGRAQ 259
           L AAE+P   PD+ IIESTYG  +H+ R  RE RF + VH  +++GGR LIP FALGRAQ
Sbjct: 188 LMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQ 247

Query: 260 ELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLSMNDRI--QNAKSNPFRFKY 319
           ELLLILDEYW NHPELH++PIYYAS LAK+C+ VY+TY  +MND+I  Q   +NPF FK+
Sbjct: 248 ELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKH 307

Query: 320 ISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKNSCVLPGYVVEGTLAKTI 379
           IS LKS++ F D+GPSVVMASPG +QSGLSR+LF+ WC+DK+N  ++ GY VEGTLAK I
Sbjct: 308 ISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHI 367

Query: 380 INEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELMPPNIILVHGEANEMGRL 439
           ++EP+E+T MSG   PL M V YISFSAH DY QTS F+  L PP++ILVHGE NEM RL
Sbjct: 368 MSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARL 427

Query: 440 KQKLMSKFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAENTPEVDETVSGLLVK 499
           K  L+ ++ D    + ++  P+N ++V + F  +K+AK +G LA+  PE  + VSG+LVK
Sbjct: 428 KAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVK 487

Query: 500 KGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQVYESVESSTDEESGV 559
           + F Y I++P DL  ++ L+ + + Q   IPYT  FN++  +L+++   VE    +E   
Sbjct: 488 RNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEELEIQEK-- 547

Query: 560 PTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNI--NREVPKVIVESEAVK 619
           P ++V   +TV  E    V L W ++P +DM +D+V  +IL +  N ++ K  V+  + K
Sbjct: 548 PALKVFKNITVIQEPGM-VVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQKVSKK 607

Query: 620 TEEENEKKAEKVIHALLVSLFGD--VKLGENGKLVVNVDGSIAEVDKQSGEVESE----- 679
            E     K    +  +L  +FG+  V + +   L V VDG  A ++ ++  VE E     
Sbjct: 608 LEMHVYSKR---LEIMLQDIFGEDCVSVKDGSILSVTVDGKTANINLETRTVECEEGSED 667

Query: 680 NEALKERVKTAFLRIQSAVKPI 688
           +E+L+E V+ A  R+  A+ P+
Sbjct: 668 DESLREMVELAAQRLYEALTPV 683

[Close]
BLAST of Cp4.1LG09g05790 vs. ExPASy Swiss-Prot
Match: Q9UKF6 (Cleavage and polyadenylation specificity factor subunit 3 OS=Homo sapiens OX=9606 GN=CPSF3 PE=1 SV=1)

HSP 1 Score: 701.8 bits (1810), Expect = 7.6e-201
Identity = 356/682 (52.20%), Postives = 482/682 (70.67%), Query Frame = 0 

Query: 20  EEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYFDEIDPSTIDVL 79
           E DQL+I PLGAG EVGRSC+ + +KG+ ++ DCGIHP   GM ALPY D IDP+ ID+L
Sbjct: 8   ESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLL 67

Query: 80  LITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVSKVSIEDMLYDEQD 139
           LI+HFHLDH  +LP+FL+KT+FKGR FMT+ATKAIY+ LLSD+VKVS +S +DMLY E D
Sbjct: 68  LISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETD 127

Query: 140 INRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRH 199
           +  SMDKIE I+FH+  EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR+EDRH
Sbjct: 128 LEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRH 187

Query: 200 LRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGGRVLIPAFALGRAQ 259
           L AAE+P   PD+ IIESTYG  +H+ R  RE RF + VH  +++GGR LIP FALGRAQ
Sbjct: 188 LMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQ 247

Query: 260 ELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLSMNDRI--QNAKSNPFRFKY 319
           ELLLILDEYW NHPELH++PIYYAS LAK+C+ VY+TY  +MND+I  Q   +NPF FK+
Sbjct: 248 ELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKH 307

Query: 320 ISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKNSCVLPGYVVEGTLAKTI 379
           IS LKS++ F D+GPSVVMASPG +QSGLSR+LF+ WC+DK+N  ++ GY VEGTLAK I
Sbjct: 308 ISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHI 367

Query: 380 INEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELMPPNIILVHGEANEMGRL 439
           ++EP+E+T MSG   PL M V YISFSAH DY QTS F+  L PP++ILVHGE NEM RL
Sbjct: 368 MSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARL 427

Query: 440 KQKLMSKFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAENTPEVDETVSGLLVK 499
           K  L+ ++ D    + ++  P+N ++V + F  +K+AK +G LA+  PE  + VSG+LVK
Sbjct: 428 KAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVK 487

Query: 500 KGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQVYESVESSTDEESGV 559
           + F Y I++P DL  ++ L+ + + Q   IPYT  FN++  +L+++   VE    +E   
Sbjct: 488 RNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLCYQLQKLTGDVEELEIQEK-- 547

Query: 560 PTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNI--NREVPKVIVESEAVK 619
           P ++V   +TV  E    V L W ++P +DM +D+V  +IL +  N ++ K  V+  + K
Sbjct: 548 PALKVFKNITVIQEPGM-VVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQKVSKK 607

Query: 620 TEEENEKKAEKVIHALLVSLFGD--VKLGENGKLVVNVDGSIAEVDKQSGEVESE----- 679
            E     K    +  +L  +FG+  V + ++  L V VDG  A ++ ++  VE E     
Sbjct: 608 LEMHVYSKR---LEIMLQDIFGEDCVSVKDDSILSVTVDGKTANLNLETRTVECEEGSED 667

Query: 680 NEALKERVKTAFLRIQSAVKPI 688
           +E+L+E V+ A  R+  A+ P+
Sbjct: 668 DESLREMVELAAQRLYEALTPV 683

[Close]
BLAST of Cp4.1LG09g05790 vs. ExPASy Swiss-Prot
Match: Q9QXK7 (Cleavage and polyadenylation specificity factor subunit 3 OS=Mus musculus OX=10090 GN=Cpsf3 PE=1 SV=2)

HSP 1 Score: 699.1 bits (1803), Expect = 4.9e-200
Identity = 354/682 (51.91%), Postives = 481/682 (70.53%), Query Frame = 0 

Query: 20  EEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYFDEIDPSTIDVL 79
           E DQL+I PLGAG EVGRSC+ + +KG+ ++ DCGIHP   GM ALPY D IDP+ ID+L
Sbjct: 8   ESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLL 67

Query: 80  LITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVSKVSIEDMLYDEQD 139
           LI+HFHLDH  +LP+FL+KT+FKGR FMT+ATKAIY+ LLSD+VKVS +S +DMLY E D
Sbjct: 68  LISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETD 127

Query: 140 INRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRH 199
           +  SMDKIE I+FH+  EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR+EDRH
Sbjct: 128 LEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRH 187

Query: 200 LRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGGRVLIPAFALGRAQ 259
           L AAE+P   PD+ IIESTYG  +H+ R  RE RF + VH  +++GGR LIP FALGRAQ
Sbjct: 188 LMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQ 247

Query: 260 ELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLSMNDRI--QNAKSNPFRFKY 319
           ELLLILDEYW NHPELH++PIYYAS LAK+C+ VY+TY  +MND+I  Q   +NPF FK+
Sbjct: 248 ELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKH 307

Query: 320 ISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKNSCVLPGYVVEGTLAKTI 379
           IS LKS++ F D+GPSVVMASPG +Q+GLSR+LF+ WC+DK+N  ++ GY VEGTLAK I
Sbjct: 308 ISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHI 367

Query: 380 INEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELMPPNIILVHGEANEMGRL 439
           ++EP+E+T MSG   PL M V YISFSAH DY QTS F+  L PP++ILVHGE NEM RL
Sbjct: 368 MSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARL 427

Query: 440 KQKLMSKFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAENTPEVDETVSGLLVK 499
           K  L+ ++ D    + ++  P+N ++V + F  +K+AK +G LA+  PE  + VSG+LVK
Sbjct: 428 KAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVK 487

Query: 500 KGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQVYESVESSTDEESGV 559
           + F Y I++P DL  ++ L+ + + Q   IPYT  F ++  +L+++   VE    +E   
Sbjct: 488 RNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFYLLYYQLQKLTGDVEELEIQEK-- 547

Query: 560 PTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNI--NREVPKVIVESEAVK 619
           P ++V   +TV  E    V L W ++P +DM +D+V  +IL +  N ++ K  V+  + K
Sbjct: 548 PALKVFKSITVVQEPGM-VVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQKVSKK 607

Query: 620 TEEENEKKAEKVIHALLVSLFGD--VKLGENGKLVVNVDGSIAEVDKQSGEVESE----- 679
            E     K    +  +L  +FG+  V + ++  L V VDG  A ++ ++  VE E     
Sbjct: 608 LEMHVYSKR---LEVMLQDIFGEDCVSVKDDSVLSVTVDGKTANINLETRAVECEEGSED 667

Query: 680 NEALKERVKTAFLRIQSAVKPI 688
           +E+L+E V+ A  R+  A+ P+
Sbjct: 668 DESLREMVELAAQRLYEALTPV 683

[Close]
BLAST of Cp4.1LG09g05790 vs. ExPASy Swiss-Prot
Match: Q86A79 (Cleavage and polyadenylation specificity factor subunit 3 OS=Dictyostelium discoideum OX=44689 GN=cpsf3 PE=3 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 6.7e-197
Identity = 350/732 (47.81%), Postives = 496/732 (67.76%), Query Frame = 0 

Query: 10  LKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYFD 69
           LK+     T ++D L ITP+G+G+EVGRSCV + YKGK V+FDCG+HPAYSG+ +LP+FD
Sbjct: 22  LKRPLKGGTEDDDILEITPIGSGSEVGRSCVLLKYKGKKVMFDCGVHPAYSGLVSLPFFD 81

Query: 70  EI--DPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVSK 129
            I  D   ID+LL++HFHLDHAA++PYF+ KT FKGRVFMT+ TKAIY +LLSD+VKVS 
Sbjct: 82  SIESDIPDIDLLLVSHFHLDHAAAVPYFVGKTKFKGRVFMTHPTKAIYGMLLSDYVKVSN 141

Query: 130 VS-IEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRV 189
           ++  +DML+D+ D++RS++KIE + + Q VE NGI+  C+ AGHVLGAAMFM++IAGV++
Sbjct: 142 ITRDDDMLFDKSDLDRSLEKIEKVRYRQKVEHNGIKVTCFNAGHVLGAAMFMIEIAGVKI 201

Query: 190 LYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGG 249
           LYTGD+SR+EDRHL  AE P    DV IIESTYGVQ+H+PR  REKRFT  VH  + + G
Sbjct: 202 LYTGDFSRQEDRHLMGAETPPVKVDVLIIESTYGVQVHEPRLEREKRFTSSVHQVVERNG 261

Query: 250 RVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLSMNDRI- 309
           + LIP FALGRAQELLLILDEYW  +P+LH+VPIYYAS LAK+C+ VY TY   MNDR+ 
Sbjct: 262 KCLIPVFALGRAQELLLILDEYWIANPQLHHVPIYYASALAKKCMGVYRTYINMMNDRVR 321

Query: 310 -QNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKNSCVL 369
            Q   SNPF FK+I  +K IE F D GP V MASPG LQSGLSRQLF+ WCSDK+N  V+
Sbjct: 322 AQFDVSNPFEFKHIKNIKGIESFDDRGPCVFMASPGMLQSGLSRQLFERWCSDKRNGIVI 381

Query: 370 PGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELMPPNI 429
           PGY VEGTLAK I++EP E+T +  +  PLN+ V Y+SFSAH+D+ QTS F++E+ PP++
Sbjct: 382 PGYSVEGTLAKHIMSEPAEITRLDNVNVPLNLTVSYVSFSAHSDFLQTSEFIQEIQPPHV 441

Query: 430 ILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAENTPEV 489
           +LVHG+ANEM RL+Q L++KF  +   +LTPKN  SV + F  +K+AKT+G +  N P+ 
Sbjct: 442 VLVHGDANEMSRLRQSLVAKF--KTINVLTPKNAMSVALEFRPEKVAKTLGSIITNPPKQ 501

Query: 490 DETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQVYESV 549
           ++ + G+LV K F + I++  D+H ++ L T  I Q++T+P+   +++++  L+Q+YE +
Sbjct: 502 NDIIQGILVTKDFTHHILSASDIHNYTNLKTNIIKQKLTLPFAQTYHILISTLEQIYEQI 561

Query: 550 ESSTDEESG----VPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNI--- 609
             ST+   G     PT+ +++ + + +     + L W S+ ++DM+ DS++ALI  I   
Sbjct: 562 IESTESTGGGGNEKPTITIYNEIKLIYNIGVSIILEWNSNTVNDMICDSIIALISQIELN 621

Query: 610 ----------------NREVPKVIVESEAVKTEEENE---------------KKAEKV-- 669
                             E+ K  +E E  K +E+ +               +K+ K+  
Sbjct: 622 PLSIKVRNPNFNNIDEKEEITKDDIEKEKEKEKEQQDGDDDDDDEIQIKVVSRKSRKLSN 681

Query: 670 -------IHALLVSLFGDVKLGENGKLVV--NVDGSIAEVDKQSGEVESENEALKERVKT 688
                  +  LL   +G+ K+ EN  L++  N+D   A +  ++  VES ++ LK++++ 
Sbjct: 682 KLNTITEVKLLLEQQYGNFKVDENDPLILHFNLDNQKAIIHLETLTVESLDQILKQKIEN 741

[Close]
BLAST of Cp4.1LG09g05790 vs. NCBI nr
Match: XP_023542349.1 (cleavage and polyadenylation specificity factor subunit 3-I-like [Cucurbita pepo subsp. pepo] >XP_023542350.1 cleavage and polyadenylation specificity factor subunit 3-I-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1362 bits (3526), Expect = 0.0
Identity = 692/692 (100.00%), Postives = 692/692 (100.00%), Query Frame = 0 

Query: 1   MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS
Sbjct: 1   MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120

Query: 121 DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360

Query: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM 420
           SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM
Sbjct: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN 480
           PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN
Sbjct: 421 PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN 480

Query: 481 TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV 540
           TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV
Sbjct: 481 TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV 540

Query: 541 YESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG 660
           VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG
Sbjct: 601 VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG 660

Query: 661 EVESENEALKERVKTAFLRIQSAVKPIPLSAP 692
           EVESENEALKERVKTAFLRIQSAVKPIPLSAP
Sbjct: 661 EVESENEALKERVKTAFLRIQSAVKPIPLSAP 692

[Close]
BLAST of Cp4.1LG09g05790 vs. NCBI nr
Match: XP_022945684.1 (cleavage and polyadenylation specificity factor subunit 3-I-like [Cucurbita moschata] >XP_022945685.1 cleavage and polyadenylation specificity factor subunit 3-I-like [Cucurbita moschata])

HSP 1 Score: 1360 bits (3520), Expect = 0.0
Identity = 691/692 (99.86%), Postives = 691/692 (99.86%), Query Frame = 0 

Query: 1   MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS
Sbjct: 1   MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120

Query: 121 DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360

Query: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM 420
           SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM
Sbjct: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN 480
           PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN
Sbjct: 421 PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN 480

Query: 481 TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV 540
           TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV
Sbjct: 481 TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV 540

Query: 541 YESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG 660
           VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG
Sbjct: 601 VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG 660

Query: 661 EVESENEALKERVKTAFLRIQSAVKPIPLSAP 692
           EVESENEALKERVKTAF RIQSAVKPIPLSAP
Sbjct: 661 EVESENEALKERVKTAFRRIQSAVKPIPLSAP 692

[Close]
BLAST of Cp4.1LG09g05790 vs. NCBI nr
Match: XP_022966852.1 (cleavage and polyadenylation specificity factor subunit 3-I-like [Cucurbita maxima] >XP_022966853.1 cleavage and polyadenylation specificity factor subunit 3-I-like [Cucurbita maxima] >XP_022966854.1 cleavage and polyadenylation specificity factor subunit 3-I-like [Cucurbita maxima])

HSP 1 Score: 1356 bits (3510), Expect = 0.0
Identity = 688/692 (99.42%), Postives = 690/692 (99.71%), Query Frame = 0 

Query: 1   MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MASVGPSPSLKKRESSATREEDQLI+TPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS
Sbjct: 1   MASVGPSPSLKKRESSATREEDQLIVTPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLL+THFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS
Sbjct: 61  GMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120

Query: 121 DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360

Query: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM 420
           SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM
Sbjct: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN 480
           PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN
Sbjct: 421 PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN 480

Query: 481 TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV 540
           TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV
Sbjct: 481 TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV 540

Query: 541 YESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVESSTDEESGVPTV VHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESSTDEESGVPTVCVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG 660
           VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG
Sbjct: 601 VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG 660

Query: 661 EVESENEALKERVKTAFLRIQSAVKPIPLSAP 692
           EVESENEALKERVKTAF RIQSAVKPIPLSAP
Sbjct: 661 EVESENEALKERVKTAFRRIQSAVKPIPLSAP 692

[Close]
BLAST of Cp4.1LG09g05790 vs. NCBI nr
Match: KAG7012686.1 (Cleavage and polyadenylation specificity factor subunit 3-I [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1351 bits (3496), Expect = 0.0
Identity = 690/697 (99.00%), Postives = 690/697 (99.00%), Query Frame = 0 

Query: 1   MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS
Sbjct: 1   MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITH-----FHLDHAASLPYFLEKTTFKGRVFMTYATKAIY 120
           GMAALPYFDEIDPSTIDVLLIT      FHLDHAASLPYFLEKTTFKGRVFMTYATKAIY
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITQYVVLSFHLDHAASLPYFLEKTTFKGRVFMTYATKAIY 120

Query: 121 KLLLSDFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAA 180
           KLLLSDFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAA
Sbjct: 121 KLLLSDFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAA 180

Query: 181 MFMVDIAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFT 240
           MFMVDIAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFT
Sbjct: 181 MFMVDIAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFT 240

Query: 241 DVVHSTISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYE 300
           DVVHSTISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYE
Sbjct: 241 DVVHSTISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYE 300

Query: 301 TYTLSMNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWC 360
           TYTLSMNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWC
Sbjct: 301 TYTLSMNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWC 360

Query: 361 SDKKNSCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAF 420
           SDKKNSCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAF
Sbjct: 361 SDKKNSCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAF 420

Query: 421 LEELMPPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIG 480
           LEELMPPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIG
Sbjct: 421 LEELMPPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIG 480

Query: 481 KLAENTPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVR 540
           KLAENTPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVR
Sbjct: 481 KLAENTPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVR 540

Query: 541 RLKQVYESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALIL 600
           RLKQVYESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALIL
Sbjct: 541 RLKQVYESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALIL 600

Query: 601 NINREVPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEV 660
           NINREVPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEV
Sbjct: 601 NINREVPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEV 660

Query: 661 DKQSGEVESENEALKERVKTAFLRIQSAVKPIPLSAP 692
           DKQSGEVESENEALKERVKTAF RIQSAVKPIPLSAP
Sbjct: 661 DKQSGEVESENEALKERVKTAFRRIQSAVKPIPLSAP 697

[Close]
BLAST of Cp4.1LG09g05790 vs. NCBI nr
Match: XP_038877886.1 (cleavage and polyadenylation specificity factor subunit 3-I [Benincasa hispida])

HSP 1 Score: 1319 bits (3413), Expect = 0.0
Identity = 667/691 (96.53%), Postives = 679/691 (98.26%), Query Frame = 0 

Query: 1   MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MASVG  PSLKKRE+SATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS
Sbjct: 1   MASVGQPPSLKKREASATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120

Query: 121 DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVS+EDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIP FALGRAQELLLILDEYWANHPELHN+PIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPVFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFD+WCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDIWCSDKKN 360

Query: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM 420
           SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHAD+AQTSAFLEELM
Sbjct: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN 480
           PPNIILVHGEANEMGRLKQKLMS+FADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAE 
Sbjct: 421 PPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480

Query: 481 TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV 540
           TPEV ETVSGLLVKKGFAYQIMAP+DLHIFSQLSTANI QRITIPY+NAFNVIVRRLKQV
Sbjct: 481 TPEVGETVSGLLVKKGFAYQIMAPEDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540

Query: 541 YESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVESSTDEES VP +RVHDRVTVKHESERHVSLHW SDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESSTDEESEVPMIRVHDRVTVKHESERHVSLHWISDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG 660
           VPKVIVESEAVKTEEEN KKAEKVIHALLVSLFGDVKLGENGKLV+NVDG+IAE+DKQSG
Sbjct: 601 VPKVIVESEAVKTEEENNKKAEKVIHALLVSLFGDVKLGENGKLVINVDGNIAELDKQSG 660

Query: 661 EVESENEALKERVKTAFLRIQSAVKPIPLSA 691
           EVESENEALKERVKTAF RIQ AVKPIPLSA
Sbjct: 661 EVESENEALKERVKTAFQRIQCAVKPIPLSA 691

[Close]
BLAST of Cp4.1LG09g05790 vs. ExPASy TrEMBL
Match: A0A6J1G1N4 (cleavage and polyadenylation specificity factor subunit 3-I-like OS=Cucurbita moschata OX=3662 GN=LOC111449842 PE=4 SV=1)

HSP 1 Score: 1360 bits (3520), Expect = 0.0
Identity = 691/692 (99.86%), Postives = 691/692 (99.86%), Query Frame = 0 

Query: 1   MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS
Sbjct: 1   MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120

Query: 121 DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360

Query: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM 420
           SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM
Sbjct: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN 480
           PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN
Sbjct: 421 PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN 480

Query: 481 TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV 540
           TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV
Sbjct: 481 TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV 540

Query: 541 YESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG 660
           VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG
Sbjct: 601 VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG 660

Query: 661 EVESENEALKERVKTAFLRIQSAVKPIPLSAP 692
           EVESENEALKERVKTAF RIQSAVKPIPLSAP
Sbjct: 661 EVESENEALKERVKTAFRRIQSAVKPIPLSAP 692

[Close]
BLAST of Cp4.1LG09g05790 vs. ExPASy TrEMBL
Match: A0A6J1HTF4 (cleavage and polyadenylation specificity factor subunit 3-I-like OS=Cucurbita maxima OX=3661 GN=LOC111466435 PE=4 SV=1)

HSP 1 Score: 1356 bits (3510), Expect = 0.0
Identity = 688/692 (99.42%), Postives = 690/692 (99.71%), Query Frame = 0 

Query: 1   MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MASVGPSPSLKKRESSATREEDQLI+TPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS
Sbjct: 1   MASVGPSPSLKKRESSATREEDQLIVTPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLL+THFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS
Sbjct: 61  GMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120

Query: 121 DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360

Query: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM 420
           SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM
Sbjct: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN 480
           PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN
Sbjct: 421 PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN 480

Query: 481 TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV 540
           TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV
Sbjct: 481 TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV 540

Query: 541 YESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVESSTDEESGVPTV VHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESSTDEESGVPTVCVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG 660
           VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG
Sbjct: 601 VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG 660

Query: 661 EVESENEALKERVKTAFLRIQSAVKPIPLSAP 692
           EVESENEALKERVKTAF RIQSAVKPIPLSAP
Sbjct: 661 EVESENEALKERVKTAFRRIQSAVKPIPLSAP 692

[Close]
BLAST of Cp4.1LG09g05790 vs. ExPASy TrEMBL
Match: A0A6J1GZU7 (cleavage and polyadenylation specificity factor subunit 3-I-like OS=Cucurbita moschata OX=3662 GN=LOC111458343 PE=4 SV=1)

HSP 1 Score: 1310 bits (3391), Expect = 0.0
Identity = 662/691 (95.80%), Postives = 678/691 (98.12%), Query Frame = 0 

Query: 1   MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MASVG  PS KKRE SATREED+LI+TPLGAGNEVGRSCVYMSYKGK+VLFDCGIHPAYS
Sbjct: 1   MASVGQPPSFKKRELSATREEDKLIVTPLGAGNEVGRSCVYMSYKGKVVLFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120

Query: 121 DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVSIEDML+DEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSIEDMLFDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIPAFALGRAQELLLILDEYWANHP+LHNVPIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPDLHNVPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360

Query: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM 420
           SCVLPGYVVEGTLAKTIINEPKEVTLMSGL APLNMQVHYISFSAHAD+AQTSAFLEELM
Sbjct: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLTAPLNMQVHYISFSAHADFAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN 480
           PPNIILVHGEANEMGRLKQKL+S+F+DRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAE 
Sbjct: 421 PPNIILVHGEANEMGRLKQKLISQFSDRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480

Query: 481 TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV 540
           TPEV ETVSGLLVKKGFA+QIMAPDDLHIFSQLSTANI QRITIPY+NAFNVIVRRLKQV
Sbjct: 481 TPEVGETVSGLLVKKGFAHQIMAPDDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540

Query: 541 YESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVESSTDEESGVPT+RVHDRVTVKHESERH+SLHWTSDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESSTDEESGVPTIRVHDRVTVKHESERHISLHWTSDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG 660
           VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFG+VKLG NGKLV+NVDGSIAE+DKQSG
Sbjct: 601 VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGNVKLGGNGKLVINVDGSIAELDKQSG 660

Query: 661 EVESENEALKERVKTAFLRIQSAVKPIPLSA 691
           EVESENE LKERVKTAF RIQ AVKPIP SA
Sbjct: 661 EVESENEVLKERVKTAFRRIQCAVKPIPPSA 691

[Close]
BLAST of Cp4.1LG09g05790 vs. ExPASy TrEMBL
Match: A0A6J1DE61 (cleavage and polyadenylation specificity factor subunit 3-I OS=Momordica charantia OX=3673 GN=LOC111019708 PE=4 SV=1)

HSP 1 Score: 1309 bits (3388), Expect = 0.0
Identity = 662/691 (95.80%), Postives = 676/691 (97.83%), Query Frame = 0 

Query: 1   MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MASV   PSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS
Sbjct: 1   MASVVQPPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120

Query: 121 DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVS+EDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHN+PIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFD+WCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN 360

Query: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM 420
           +CVLPGYVVEGTLAKTIINEPKEVTLM+GLMAPLNMQVHYISFSAHAD+AQTSAFLEELM
Sbjct: 361 ACVLPGYVVEGTLAKTIINEPKEVTLMNGLMAPLNMQVHYISFSAHADFAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN 480
           PPNIILVHGEANEMGRLKQKL+S+FADRNTKILTPKNCQSVEMYFNSQKMAKTIG+LAE 
Sbjct: 421 PPNIILVHGEANEMGRLKQKLISQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGRLAEK 480

Query: 481 TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV 540
           TPE  ETVSGLLVKKGFAYQIMA DDLHIFSQLSTANI QRITIPY+NAFNVIVRRLKQV
Sbjct: 481 TPEAGETVSGLLVKKGFAYQIMASDDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540

Query: 541 YESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVES TDEESGVP + VHDRVTVKHESE+HVSLHWTSDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESLTDEESGVPAICVHDRVTVKHESEKHVSLHWTSDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG 660
           VPKVIVESEA KTEEENEKKAEKVIHALLVSLFGDVKLGENGKLV+NVDGSIAE+DKQSG
Sbjct: 601 VPKVIVESEAAKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVINVDGSIAELDKQSG 660

Query: 661 EVESENEALKERVKTAFLRIQSAVKPIPLSA 691
           EVESENE LKERVKTAF RIQ AVKPIPLSA
Sbjct: 661 EVESENEGLKERVKTAFRRIQCAVKPIPLSA 691

[Close]
BLAST of Cp4.1LG09g05790 vs. ExPASy TrEMBL
Match: A0A6J1KE99 (cleavage and polyadenylation specificity factor subunit 3-I-like OS=Cucurbita maxima OX=3661 GN=LOC111492433 PE=4 SV=1)

HSP 1 Score: 1303 bits (3372), Expect = 0.0
Identity = 659/691 (95.37%), Postives = 675/691 (97.68%), Query Frame = 0 

Query: 1   MASVGPSPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYS 60
           MASVG  PS KKRE SATREED+LI+TPLGAG EVGRSCVYMSYKGK+VLFDCGIHPAYS
Sbjct: 1   MASVGQPPSFKKRELSATREEDKLIVTPLGAGTEVGRSCVYMSYKGKVVLFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120
           GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS
Sbjct: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLS 120

Query: 121 DFVKVSKVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180
           DFVKVSKVSIEDML+DEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD
Sbjct: 121 DFVKVSKVSIEDMLFDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240
           IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS 300
           TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLS 300

Query: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360
           MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN
Sbjct: 301 MNDRIQNAKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKN 360

Query: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELM 420
           SCVLPGYVVEGTLAKTIINEPKEVTLMSGL APLNMQVHYISFSAHAD+AQTSAFLEELM
Sbjct: 361 SCVLPGYVVEGTLAKTIINEPKEVTLMSGLTAPLNMQVHYISFSAHADFAQTSAFLEELM 420

Query: 421 PPNIILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEN 480
           PPNIILVHGEANEMGRLKQKL+S+F+DRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAE 
Sbjct: 421 PPNIILVHGEANEMGRLKQKLISQFSDRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEK 480

Query: 481 TPEVDETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQV 540
           TPEV ETVSGLLVKKGFA+QIMAPDDLHIFSQLSTANI QRITIPY+NAFNVIVRRLKQV
Sbjct: 481 TPEVGETVSGLLVKKGFAHQIMAPDDLHIFSQLSTANINQRITIPYSNAFNVIVRRLKQV 540

Query: 541 YESVESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINRE 600
           YESVESSTDEESGVPT+ VHDRVTVKHESERH+SLHWTSDPLSDMVSDSVVALILNINRE
Sbjct: 541 YESVESSTDEESGVPTILVHDRVTVKHESERHISLHWTSDPLSDMVSDSVVALILNINRE 600

Query: 601 VPKVIVESEAVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSG 660
           VPKVIVESEAVKTEEEN+KKAEKV HALLVSLFG+VKLG NGKLV+NVDGSIAE+DKQSG
Sbjct: 601 VPKVIVESEAVKTEEENKKKAEKVTHALLVSLFGNVKLGGNGKLVINVDGSIAELDKQSG 660

Query: 661 EVESENEALKERVKTAFLRIQSAVKPIPLSA 691
           EVESENE LKERVKTAF RIQ AVKPIP SA
Sbjct: 661 EVESENEVLKERVKTAFRRIQCAVKPIPPSA 691

[Close]
BLAST of Cp4.1LG09g05790 vs. TAIR 10
Match: AT1G61010.1 (cleavage and polyadenylation specificity factor 73-I )

HSP 1 Score: 1154.4 bits (2985), Expect = 0.0e+00
Identity = 561/688 (81.54%), Postives = 641/688 (93.17%), Query Frame = 0 

Query: 7   SPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALP 66
           S SLK+RE   +R+ DQLI+TPLGAG+EVGRSCVYMS++GK +LFDCGIHPAYSGMAALP
Sbjct: 5   STSLKRREQPISRDGDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMAALP 64

Query: 67  YFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVS 126
           YFDEIDPS+IDVLLITHFH+DHAASLPYFLEKTTF GRVFMT+ATKAIYKLLL+D+VKVS
Sbjct: 65  YFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVS 124

Query: 127 KVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRV 186
           KVS+EDML+DEQDIN+SMDKIEVIDFHQTVEVNGI+FWCYTAGHVLGAAMFMVDIAGVR+
Sbjct: 125 KVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRI 184

Query: 187 LYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGG 246
           LYTGDYSREEDRHLRAAE+PQFSPD+CIIEST GVQLHQ RHIREKRFTDV+HST++QGG
Sbjct: 185 LYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVAQGG 244

Query: 247 RVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLSMNDRIQ 306
           RVLIPAFALGRAQELLLILDEYWANHP+LHN+PIYYASPLAK+C+ VY+TY LSMNDRI+
Sbjct: 245 RVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMNDRIR 304

Query: 307 N--AKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKNSCVL 366
           N  A SNPF FK+ISPL SI+ F DVGPSVVMA+PGGLQSGLSRQLFD WCSDKKN+C++
Sbjct: 305 NQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNACII 364

Query: 367 PGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELMPPNI 426
           PGY+VEGTLAKTIINEPKEVTLM+GL APLNMQVHYISFSAHADYAQTS FL+ELMPPNI
Sbjct: 365 PGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNI 424

Query: 427 ILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAENTPEV 486
           ILVHGEANEM RLKQKL+++F D NTKI+TPKNC+SVEMYFNS+K+AKTIG+LAE TP+V
Sbjct: 425 ILVHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAEKTPDV 484

Query: 487 DETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQVYESV 546
            +TVSG+LVKKGF YQIMAPD+LH+FSQLSTA + QRITIP+  AF VI  RL++++ESV
Sbjct: 485 GDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITIPFVGAFGVIKHRLEKIFESV 544

Query: 547 ESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINREVPKV 606
           E STDEESG+P ++VH+RVTVK ESE+H+SL W+SDP+SDMVSDS+VALILNI+REVPK+
Sbjct: 545 EFSTDEESGLPALKVHERVTVKQESEKHISLQWSSDPISDMVSDSIVALILNISREVPKI 604

Query: 607 IVESE-AVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSGEVE 666
           ++E E AVK+EEEN KK EKVI+ALLVSLFGDVKLGENGKLV+ VDG++A++DK+SGEVE
Sbjct: 605 VMEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDGNVAQLDKESGEVE 664

Query: 667 SENEALKERVKTAFLRIQSAVKPIPLSA 692
           SE+  LKERV+ AF RIQSAVKPIPLSA
Sbjct: 665 SEHSGLKERVRVAFERIQSAVKPIPLSA 692

[Close]
BLAST of Cp4.1LG09g05790 vs. TAIR 10
Match: AT1G61010.2 (cleavage and polyadenylation specificity factor 73-I )

HSP 1 Score: 1154.4 bits (2985), Expect = 0.0e+00
Identity = 561/688 (81.54%), Postives = 641/688 (93.17%), Query Frame = 0 

Query: 7   SPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALP 66
           S SLK+RE   +R+ DQLI+TPLGAG+EVGRSCVYMS++GK +LFDCGIHPAYSGMAALP
Sbjct: 5   STSLKRREQPISRDGDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMAALP 64

Query: 67  YFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVS 126
           YFDEIDPS+IDVLLITHFH+DHAASLPYFLEKTTF GRVFMT+ATKAIYKLLL+D+VKVS
Sbjct: 65  YFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVS 124

Query: 127 KVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRV 186
           KVS+EDML+DEQDIN+SMDKIEVIDFHQTVEVNGI+FWCYTAGHVLGAAMFMVDIAGVR+
Sbjct: 125 KVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRI 184

Query: 187 LYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGG 246
           LYTGDYSREEDRHLRAAE+PQFSPD+CIIEST GVQLHQ RHIREKRFTDV+HST++QGG
Sbjct: 185 LYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVAQGG 244

Query: 247 RVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLSMNDRIQ 306
           RVLIPAFALGRAQELLLILDEYWANHP+LHN+PIYYASPLAK+C+ VY+TY LSMNDRI+
Sbjct: 245 RVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMNDRIR 304

Query: 307 N--AKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKNSCVL 366
           N  A SNPF FK+ISPL SI+ F DVGPSVVMA+PGGLQSGLSRQLFD WCSDKKN+C++
Sbjct: 305 NQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNACII 364

Query: 367 PGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELMPPNI 426
           PGY+VEGTLAKTIINEPKEVTLM+GL APLNMQVHYISFSAHADYAQTS FL+ELMPPNI
Sbjct: 365 PGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNI 424

Query: 427 ILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAENTPEV 486
           ILVHGEANEM RLKQKL+++F D NTKI+TPKNC+SVEMYFNS+K+AKTIG+LAE TP+V
Sbjct: 425 ILVHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAEKTPDV 484

Query: 487 DETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQVYESV 546
            +TVSG+LVKKGF YQIMAPD+LH+FSQLSTA + QRITIP+  AF VI  RL++++ESV
Sbjct: 485 GDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITIPFVGAFGVIKHRLEKIFESV 544

Query: 547 ESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINREVPKV 606
           E STDEESG+P ++VH+RVTVK ESE+H+SL W+SDP+SDMVSDS+VALILNI+REVPK+
Sbjct: 545 EFSTDEESGLPALKVHERVTVKQESEKHISLQWSSDPISDMVSDSIVALILNISREVPKI 604

Query: 607 IVESE-AVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSGEVE 666
           ++E E AVK+EEEN KK EKVI+ALLVSLFGDVKLGENGKLV+ VDG++A++DK+SGEVE
Sbjct: 605 VMEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDGNVAQLDKESGEVE 664

Query: 667 SENEALKERVKTAFLRIQSAVKPIPLSA 692
           SE+  LKERV+ AF RIQSAVKPIPLSA
Sbjct: 665 SEHSGLKERVRVAFERIQSAVKPIPLSA 692

[Close]
BLAST of Cp4.1LG09g05790 vs. TAIR 10
Match: AT1G61010.3 (cleavage and polyadenylation specificity factor 73-I )

HSP 1 Score: 1154.4 bits (2985), Expect = 0.0e+00
Identity = 561/688 (81.54%), Postives = 641/688 (93.17%), Query Frame = 0 

Query: 7   SPSLKKRESSATREEDQLIITPLGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALP 66
           S SLK+RE   +R+ DQLI+TPLGAG+EVGRSCVYMS++GK +LFDCGIHPAYSGMAALP
Sbjct: 5   STSLKRREQPISRDGDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMAALP 64

Query: 67  YFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVS 126
           YFDEIDPS+IDVLLITHFH+DHAASLPYFLEKTTF GRVFMT+ATKAIYKLLL+D+VKVS
Sbjct: 65  YFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVS 124

Query: 127 KVSIEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRV 186
           KVS+EDML+DEQDIN+SMDKIEVIDFHQTVEVNGI+FWCYTAGHVLGAAMFMVDIAGVR+
Sbjct: 125 KVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRI 184

Query: 187 LYTGDYSREEDRHLRAAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGG 246
           LYTGDYSREEDRHLRAAE+PQFSPD+CIIEST GVQLHQ RHIREKRFTDV+HST++QGG
Sbjct: 185 LYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVAQGG 244

Query: 247 RVLIPAFALGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLSMNDRIQ 306
           RVLIPAFALGRAQELLLILDEYWANHP+LHN+PIYYASPLAK+C+ VY+TY LSMNDRI+
Sbjct: 245 RVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMNDRIR 304

Query: 307 N--AKSNPFRFKYISPLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKNSCVL 366
           N  A SNPF FK+ISPL SI+ F DVGPSVVMA+PGGLQSGLSRQLFD WCSDKKN+C++
Sbjct: 305 NQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNACII 364

Query: 367 PGYVVEGTLAKTIINEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELMPPNI 426
           PGY+VEGTLAKTIINEPKEVTLM+GL APLNMQVHYISFSAHADYAQTS FL+ELMPPNI
Sbjct: 365 PGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNI 424

Query: 427 ILVHGEANEMGRLKQKLMSKFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAENTPEV 486
           ILVHGEANEM RLKQKL+++F D NTKI+TPKNC+SVEMYFNS+K+AKTIG+LAE TP+V
Sbjct: 425 ILVHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAEKTPDV 484

Query: 487 DETVSGLLVKKGFAYQIMAPDDLHIFSQLSTANIYQRITIPYTNAFNVIVRRLKQVYESV 546
            +TVSG+LVKKGF YQIMAPD+LH+FSQLSTA + QRITIP+  AF VI  RL++++ESV
Sbjct: 485 GDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITIPFVGAFGVIKHRLEKIFESV 544

Query: 547 ESSTDEESGVPTVRVHDRVTVKHESERHVSLHWTSDPLSDMVSDSVVALILNINREVPKV 606
           E STDEESG+P ++VH+RVTVK ESE+H+SL W+SDP+SDMVSDS+VALILNI+REVPK+
Sbjct: 545 EFSTDEESGLPALKVHERVTVKQESEKHISLQWSSDPISDMVSDSIVALILNISREVPKI 604

Query: 607 IVESE-AVKTEEENEKKAEKVIHALLVSLFGDVKLGENGKLVVNVDGSIAEVDKQSGEVE 666
           ++E E AVK+EEEN KK EKVI+ALLVSLFGDVKLGENGKLV+ VDG++A++DK+SGEVE
Sbjct: 605 VMEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDGNVAQLDKESGEVE 664

Query: 667 SENEALKERVKTAFLRIQSAVKPIPLSA 692
           SE+  LKERV+ AF RIQSAVKPIPLSA
Sbjct: 665 SEHSGLKERVRVAFERIQSAVKPIPLSA 692

[Close]
BLAST of Cp4.1LG09g05790 vs. TAIR 10
Match: AT2G01730.1 (cleavage and polyadenylation specificity factor 73 kDa subunit-II )

HSP 1 Score: 285.0 bits (728), Expect = 1.6e-76
Identity = 159/426 (37.32%), Postives = 233/426 (54.69%), Query Frame = 0 

Query: 29  LGAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYFDEIDPS-----TIDVLLITH 88
           LGAG E+G+SCV ++  GK ++FDCG+H         P F  I  S      I  ++ITH
Sbjct: 8   LGAGQEIGKSCVVVTINGKKIMFDCGMHMGCDDHNRYPNFSLISKSGDFDNAISCIIITH 67

Query: 89  FHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDFVKVS-KVSIEDMLYDEQDINR 148
           FH+DH  +LPYF E   + G ++M+Y TKA+  L+L D+ +V      E+ L+    I  
Sbjct: 68  FHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELFTTTHIAN 127

Query: 149 SMDKIEVIDFHQTVEVN-GIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLR 208
            M K+  ID  QT++V+  ++   Y AGHVLGA M    +    ++YTGDY+   DRHL 
Sbjct: 128 CMKKVIAIDLKQTIQVDEDLQIRAYYAGHVLGAVMVYAKMGDAAIVYTGDYNMTTDRHLG 187

Query: 209 AAEMPQFSPDVCIIESTYGVQLHQPRHIREKRFTDVVHSTISQGGRVLIPAFALGRAQEL 268
           AA++ +   D+ I ESTY   +   ++ RE+ F   VH  ++ GG+ LIP+FALGRAQEL
Sbjct: 188 AAKIDRLQLDLLISESTYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFALGRAQEL 247

Query: 269 LLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYT--LSMNDRIQNAKSNPFRFKYIS 328
            ++LD+YW        VPIY++S L  +    Y+      S N + ++   NPF FK + 
Sbjct: 248 CMLLDDYWERMN--IKVPIYFSSGLTIQANMYYKMLISWTSQNVKEKHNTHNPFDFKNVK 307

Query: 329 PLKSIEVFKDVGPSVVMASPGGLQSGLSRQLFDLWCSDKKNSCVLPGYVVEGTLA-KTII 388
                 +    GP V+ A+PG L +G S ++F  W     N   LPGY V GT+  K + 
Sbjct: 308 DFDR-SLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGHKLMA 367

Query: 389 NEPKEVTLMSGLMAPLNMQVHYISFSAHADYAQTSAFLEELMPPNIILVHGEANEMGRLK 445
            +P  V L +G    +  +VH ++FS H D        + L P N++LVHGE   M  LK
Sbjct: 368 GKPTTVDLYNGTKVDVRCKVHQVAFSPHTDAKGIMDLTKFLSPKNVVLVHGEKPSMMILK 427

[Close]
BLAST of Cp4.1LG09g05790 vs. TAIR 10
Match: AT5G23880.1 (cleavage and polyadenylation specificity factor 100 )

HSP 1 Score: 139.4 bits (350), Expect = 1.1e-32
Identity = 103/373 (27.61%), Postives = 185/373 (49.60%), Query Frame = 0 

Query: 26  ITPL-GAGNEVGRSCVYMSYKGKIVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLITHF 85
           +TPL G  NE   S + +S  G   L DCG +  +      P       STID +L++H 
Sbjct: 7   VTPLCGVYNENPLSYL-VSIDGFNFLIDCGWNDLFDTSLLEPL--SRVASTIDAVLLSHP 66

Query: 86  HLDHAASLPYFLEKTTFKGRVFMTYATKAIYKL----LLSDFVKVSKVSIEDMLYDEQDI 145
              H  +LPY +++      V   YAT+ +++L    +   F+   +VS  D L+   DI
Sbjct: 67  DTLHIGALPYAMKQLGLSAPV---YATEPVHRLGLLTMYDQFLSRKQVSDFD-LFTLDDI 126

Query: 146 NRSMDKIEVIDFHQTVEVN----GIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREE 205
           + +   +  + + Q   ++    GI    + AGH+LG +++ +   G  V+Y  DY+  +
Sbjct: 127 DSAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRK 186

Query: 206 DRHLRAAEMPQF-SPDVCIIESTYGVQLHQ-PRHIREKRFTDVVHSTISQGGRVLIPAFA 265
           +RHL    +  F  P V I ++ + +  +Q  R  R+K F D +   +  GG VL+P   
Sbjct: 187 ERHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDT 246

Query: 266 LGRAQELLLILDEYWANHPELHNVPIYYASPLAKRCLTVYETYTLSMNDRI----QNAKS 325
            GR  ELLLIL+++W+      + PIY+ + ++   +   +++   M+D I    + ++ 
Sbjct: 247 AGRVLELLLILEQHWSQRG--FSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRD 306

Query: 326 NPFRFKYISPLKSIEVFKDV--GPSVVMASPGGLQSGLSRQLFDLWCSDKKNSCVLPGYV 382
           N F  ++++ L +     +   GP VV+AS   L++G +R++F  W +D +N  +     
Sbjct: 307 NAFLLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETG 366

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g05790 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C9520.0e+0081.54Cleavage and polyadenylation specificity factor subunit 3-I OS=Arabidopsis thali... [more]
P791015.8e-20152.20Cleavage and polyadenylation specificity factor subunit 3 OS=Bos taurus OX=9913 ... [more]
Q9UKF67.6e-20152.20Cleavage and polyadenylation specificity factor subunit 3 OS=Homo sapiens OX=960... [more]
Q9QXK74.9e-20051.91Cleavage and polyadenylation specificity factor subunit 3 OS=Mus musculus OX=100... [more]
Q86A796.7e-19747.81Cleavage and polyadenylation specificity factor subunit 3 OS=Dictyostelium disco... [more]
BLAST of Cp4.1LG09g05790 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023542349.10.0100.00cleavage and polyadenylation specificity factor subunit 3-I-like [Cucurbita pepo... [more]
XP_022945684.10.099.86cleavage and polyadenylation specificity factor subunit 3-I-like [Cucurbita mosc... [more]
XP_022966852.10.099.42cleavage and polyadenylation specificity factor subunit 3-I-like [Cucurbita maxi... [more]
KAG7012686.10.099.00Cleavage and polyadenylation specificity factor subunit 3-I [Cucurbita argyrospe... [more]
XP_038877886.10.096.53cleavage and polyadenylation specificity factor subunit 3-I [Benincasa hispida][more]
BLAST of Cp4.1LG09g05790 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G1N40.099.86cleavage and polyadenylation specificity factor subunit 3-I-like OS=Cucurbita mo... [more]
A0A6J1HTF40.099.42cleavage and polyadenylation specificity factor subunit 3-I-like OS=Cucurbita ma... [more]
A0A6J1GZU70.095.80cleavage and polyadenylation specificity factor subunit 3-I-like OS=Cucurbita mo... [more]
A0A6J1DE610.095.80cleavage and polyadenylation specificity factor subunit 3-I OS=Momordica charant... [more]
A0A6J1KE990.095.37cleavage and polyadenylation specificity factor subunit 3-I-like OS=Cucurbita ma... [more]
BLAST of Cp4.1LG09g05790 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G61010.10.0e+0081.54cleavage and polyadenylation specificity factor 73-I [more]
AT1G61010.20.0e+0081.54cleavage and polyadenylation specificity factor 73-I [more]
AT1G61010.30.0e+0081.54cleavage and polyadenylation specificity factor 73-I [more]
AT2G01730.11.6e-7637.32cleavage and polyadenylation specificity factor 73 kDa subunit-II [more]
AT5G23880.11.1e-3227.61cleavage and polyadenylation specificity factor 100 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 652..672
NoneNo IPR availableGENE3D3.40.50.10890coord: 226..405
e-value: 1.0E-151
score: 507.1
NoneNo IPR availablePANTHERPTHR11203:SF48SUBFAMILY NOT NAMEDcoord: 7..688
NoneNo IPR availablePANTHERPTHR11203CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBERcoord: 7..688
NoneNo IPR availableCDDcd16292CPSF3-like_MBL-foldcoord: 24..217
e-value: 8.65537E-144
score: 415.446
IPR001279Metallo-beta-lactamaseSMARTSM00849Lactamase_B_5acoord: 36..224
e-value: 1.4E-13
score: 61.2
IPR001279Metallo-beta-lactamasePFAMPF00753Lactamase_Bcoord: 35..200
e-value: 2.0E-21
score: 76.9
IPR021718Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-termSMARTSM01098CPSF73_100_C_2coord: 484..687
e-value: 2.7E-42
score: 156.5
IPR021718Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-termPFAMPF11718CPSF73-100_Ccoord: 487..686
e-value: 1.4E-45
score: 155.5
IPR022712Beta-Casp domainSMARTSM01027Beta_Casp_2coord: 258..377
e-value: 1.5E-37
score: 140.8
IPR022712Beta-Casp domainPFAMPF10996Beta-Caspcoord: 258..377
e-value: 6.1E-26
score: 91.0
IPR011108Zn-dependent metallo-hydrolase, RNA specificity domainPFAMPF07521RMMBLcoord: 392..446
e-value: 4.9E-16
score: 58.4
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 29..434
e-value: 1.0E-151
score: 507.1
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 22..465

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g05790.1Cp4.1LG09g05790.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing
cellular_component GO:0005634 nucleus