Cp4.1LG09g05300 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g05300
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Pectin lyase-like superfamily protein
Location	Cp4.1LG09: 3387363 .. 3390525 (-)
RNA-Seq Expression	Cp4.1LG09g05300
Synteny	Cp4.1LG09g05300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGCCATATGCCAACTAAAATGTATTCTTTATTTTCCCTTATAAATTCTAACCTCTTTCATTGAATCATACCATTAACACAAATCACTTCAGTAATCTCTTCAACCAAGTCGACTAAAATGGACAAGTTCTTCCTGCTTCCCCTGCTTTCCCTGCTGATCATAGCCTATGGAGTTTCCTGCAGCATTGACCCCGAAAGCGACATCGACATGGTTAAAGAGCTCGAAACTTTCGACATTGAAGAACAGGACGACAATGTGGTGGACACATACGCAATCCCAGTGTGGAAAAGTGAGCGTGGGAGTCGGTCTCTAATGAATGTGGATAGTTTTGACGCGGTTGGAGATGGAGTTACAGATGATACCATGGTAGTACATAAAACATTTCCATTTTGGAAACATGATTTTGGCAGAGATGATACCAAACCAAAGTGTTTATTTTGCTATCAGGCTTTCAGGAAGGCATGGGAAACTGCCTGCAGCGCTGCAAAATCAGTTCTTTTGGTGCCAAAAGAAAAGAGATATCTGGTGAATGCTACCACTTTTAAAGGGCCATGCAATGATGGTATGATAATCCAGGTAAAACACAAGATTATATAAGGATTTCTTTGTTTTTTTTTTTTCCTCCAAATAAATGGGAAGATCATGGTTGAATGATAGAACTAACCTTGCAGATTGAAGGAACAATAATTGCACCAGATGAACCAGAGAAATGGGATCCAAAACTTCCACGACAATGGCTGGAATTCACAAAACTTAATGCAGCTACCTTTCAAGGTGATGGAGTAATCGACGGCTCCGGTGAAAAATGGTGGGCAGAATCCTGTAAAAAAAACAAGTCCAGGGTAAATTTTGAGCTGTCCCGGTGCTTGTTTCTTAGACTATGTAATTCAAATGCTAATCATTTCTGGTTTTTTTTTTTTTTTTACAGCCATGCAAAGGAGCACCAACAGTATGGACAAAACCACCTCAAAAACCTTAATCTTTCCAAGTGCAACACATTCTGATTTGATGTTTTTTCTTGCAGGCATTAACCATTGATTCAAGTTCAAATATAAGAGTAAAAGGCCTTACTATTCAAAACAGCCAACAGATGCATTTCACCATTGCACGATCCGAAACCGTTCGGATTACGGAGGTACGAGTCTCATCTCCAGGAGACAGCCCGAACACAGACGGGATCCACATCACTCAATCAACGAATGTCGTAGTCCAAAACTGCAAGATTTCTACAGGTTTTACCCCAGTGTTTTCACGCTCTAAACTGGTTGGAAATTGTATGGATGAAGAATGGTTGTGTAATGATTATGTAGGTGATGATTGCATCTCCATTGTCAATGCTAGCTCTGGCATCAAAATGAAGGGGATATCATGTGGACCAGGACATGGGATCAGGTATCAACAAATGGTTTCATTTCATTCAGCTCCAAAACAAGATCAATGTCTTAGAATTCGATTCTCTTTGTTTGTTTGCTGTGAAACTGTGTTCATCAGCATTGGGAGTTTAGGGAAAGACAACTCTGCTGGGATTGTGTCAAAGGTGGTGCTAGACACTGCCTTTCTCCGAGAGACAACAAATGGTGTTAGAATCAAGACATGGCAGGTTAGAATCACAGCTTTAACCAGAATTTTGATACTACTTTTAGATGGTCATATGGTGTGAGAATCTCACGTTGGTTGGGGGTGGAGAACGAAACACCCTTTATAAGGGTGTGGAAACCTTTCCCTAGGAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGTAACGCCCATAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCCGTTACAAATGGGATCAGAGCCAGACACCGGACTATATGCCAGCAAGGAGACTGTTCCTCGAAGGGGAGTAAACATGAGGTAGTGTGCTAGTAAGGATGCTGGCCCCGAAGGGGGGTGGATTGTGAGAATCCCACATTAGTTGGGGAGGAGAATGAAACACCCTTTATCAAGGTGTGGAAATCTTTCATTAGGAGACACATTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAAGACAATATCTACTAGCGGTTGGTCTTGGCCGTTACATATGGTCAATTATAACCAATAACAATTGGAAAACTACTATGTTCATGTGGTTATAGGGAGGTTCGGGGTATGTTCGTGCCGTACGATTCGAAAATGTGAGAATGCAAGATGTTGAGAACCCAATTATCATAGATCAATTCTATTGTGACTCTCCTAATGCTTGTGAAACTCAGGTATTATCCACAAAATCCATATTCAGCTACTAATCAATAAGACAAAGTTTGGCTAATGCCTTTTGTTTTTGTTAGACATCTGCCATTAAAGTAAGCCAAATCATGTACCGGAACATAAGTGGAACCACAACAAGCAAGAACGCAATGAAATTCGCCTGTAGCGACAGTGTTCCATGCAGCAACATAATCCTAAGCAATGTCAATTTAGAGAAGACGGATGGCACAGTGGAGACCTATTGCCATGCTGCTCAAGGCTTCGGATATGGCGTCGTGCACCCATCGGCCGACTGCCTAACTTCCAGCGACAATGACTTTGCTGCTAAAGATCAAACCCAACTCCCTACTGAGCAGCACATTGTTCACACTGAACTCTGACCTTGTTATCCTGTCTATCTGTACTAAACTACTAAAAGGATCATAATTTTACATAGCATAGACAATTATACCTACCCTTTTGGAATCTAAATAGAAATATAGATTACTAAGTAAAGGATTGTACTACTGCTAGAAGAAAATATACATATTTTGAGTGTATAGTAAAGTTTTTTTTTTTAATATTAAAGTTCATATCATATGGTTGATTGTTCTCTGAACTATAGGTAGTATATACATTACTCCAAGAAAGAACTATATAATATACAAAAATGTGAAGATGGGTAGTAGTGGACAATGATGAGTAACAATAAGGGGAAGATTGAGGAGGAAGGCATATGGTTAATGGAGTACATTGGACGCCCAGCAAACAAATCAAAGTTGAGTCTTCCTTTCTGAACATTCTTAATGTGAATACCAAAAAATGAAGTGAAAACAGAGCGGTTTCTGGTGGAATTTCAACTTCATGAAAGGGAAAGATGGCGTACGGTAGAAGCCATGGAACAAGACAAAGTGGTCCAGTGGAGT

mRNA sequence

AAAGCCATATGCCAACTAAAATGTATTCTTTATTTTCCCTTATAAATTCTAACCTCTTTCATTGAATCATACCATTAACACAAATCACTTCAGTAATCTCTTCAACCAAGTCGACTAAAATGGACAAGTTCTTCCTGCTTCCCCTGCTTTCCCTGCTGATCATAGCCTATGGAGTTTCCTGCAGCATTGACCCCGAAAGCGACATCGACATGGTTAAAGAGCTCGAAACTTTCGACATTGAAGAACAGGACGACAATGTGGTGGACACATACGCAATCCCAGTGTGGAAAAGTGAGCGTGGGAGTCGGTCTCTAATGAATGTGGATAGTTTTGACGCGGTTGGAGATGGAGTTACAGATGATACCATGGCTTTCAGGAAGGCATGGGAAACTGCCTGCAGCGCTGCAAAATCAGTTCTTTTGGTGCCAAAAGAAAAGAGATATCTGGTGAATGCTACCACTTTTAAAGGGCCATGCAATGATGGTATGATAATCCAGATTGAAGGAACAATAATTGCACCAGATGAACCAGAGAAATGGGATCCAAAACTTCCACGACAATGGCTGGAATTCACAAAACTTAATGCAGCTACCTTTCAAGGTGATGGAGTAATCGACGGCTCCGGTGAAAAATGGTGGGCAGAATCCTGTAAAAAAAACAAGTCCAGGCCATGCAAAGGAGCACCAACAGCATTAACCATTGATTCAAGTTCAAATATAAGAGTAAAAGGCCTTACTATTCAAAACAGCCAACAGATGCATTTCACCATTGCACGATCCGAAACCGTTCGGATTACGGAGGTACGAGTCTCATCTCCAGGAGACAGCCCGAACACAGACGGGATCCACATCACTCAATCAACGAATAACCCAATTATCATAGATCAATTCTATTGTGACTCTCCTAATGCTTGTGAAACTCAGACATCTGCCATTAAAGTAAGCCAAATCATGTACCGGAACATAAGTGGAACCACAACAAGCAAGAACGCAATGAAATTCGCCTGTAGCGACAGTGTTCCATGCAGCAACATAATCCTAAGCAATGTCAATTTAGAGAAGACGGATGGCACAGTGGAGACCTATTGCCATGCTGCTCAAGGCTTCGGATATGGCGTCGTGCACCCATCGGCCGACTGCCTAACTTCCAGCGACAATGACTTTGCTGCTAAAGATCAAACCCAACTCCCTACTGAGCAGCACATTGTTCACACTGAACTCTGACCTTGTTATCCTGTCTATCTGTACTAAACTACTAAAAGGATCATAATTTTACATAGCATAGACAATTATACCTACCCTTTTGGAATCTAAATAGAAATATAGATTACTAAGTAAAGGATTGTACTACTGCTAGAAGAAAATATACATATTTTGAGTGTATAGTAAAGTTTTTTTTTTTAATATTAAAGTTCATATCATATGGTTGATTGTTCTCTGAACTATAGGTAGTATATACATTACTCCAAGAAAGAACTATATAATATACAAAAATGTGAAGATGGGTAGTAGTGGACAATGATGAGTAACAATAAGGGGAAGATTGAGGAGGAAGGCATATGGTTAATGGAGTACATTGGACGCCCAGCAAACAAATCAAAGTTGAGTCTTCCTTTCTGAACATTCTTAATGTGAATACCAAAAAATGAAGTGAAAACAGAGCGGTTTCTGGTGGAATTTCAACTTCATGAAAGGGAAAGATGGCGTACGGTAGAAGCCATGGAACAAGACAAAGTGGTCCAGTGGAGT

Coding sequence (CDS)

ATGGACAAGTTCTTCCTGCTTCCCCTGCTTTCCCTGCTGATCATAGCCTATGGAGTTTCCTGCAGCATTGACCCCGAAAGCGACATCGACATGGTTAAAGAGCTCGAAACTTTCGACATTGAAGAACAGGACGACAATGTGGTGGACACATACGCAATCCCAGTGTGGAAAAGTGAGCGTGGGAGTCGGTCTCTAATGAATGTGGATAGTTTTGACGCGGTTGGAGATGGAGTTACAGATGATACCATGGCTTTCAGGAAGGCATGGGAAACTGCCTGCAGCGCTGCAAAATCAGTTCTTTTGGTGCCAAAAGAAAAGAGATATCTGGTGAATGCTACCACTTTTAAAGGGCCATGCAATGATGGTATGATAATCCAGATTGAAGGAACAATAATTGCACCAGATGAACCAGAGAAATGGGATCCAAAACTTCCACGACAATGGCTGGAATTCACAAAACTTAATGCAGCTACCTTTCAAGGTGATGGAGTAATCGACGGCTCCGGTGAAAAATGGTGGGCAGAATCCTGTAAAAAAAACAAGTCCAGGCCATGCAAAGGAGCACCAACAGCATTAACCATTGATTCAAGTTCAAATATAAGAGTAAAAGGCCTTACTATTCAAAACAGCCAACAGATGCATTTCACCATTGCACGATCCGAAACCGTTCGGATTACGGAGGTACGAGTCTCATCTCCAGGAGACAGCCCGAACACAGACGGGATCCACATCACTCAATCAACGAATAACCCAATTATCATAGATCAATTCTATTGTGACTCTCCTAATGCTTGTGAAACTCAGACATCTGCCATTAAAGTAAGCCAAATCATGTACCGGAACATAAGTGGAACCACAACAAGCAAGAACGCAATGAAATTCGCCTGTAGCGACAGTGTTCCATGCAGCAACATAATCCTAAGCAATGTCAATTTAGAGAAGACGGATGGCACAGTGGAGACCTATTGCCATGCTGCTCAAGGCTTCGGATATGGCGTCGTGCACCCATCGGCCGACTGCCTAACTTCCAGCGACAATGACTTTGCTGCTAAAGATCAAACCCAACTCCCTACTGAGCAGCACATTGTTCACACTGAACTCTGA

Protein sequence

MDKFFLLPLLSLLIIAYGVSCSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSERGSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCNDGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKNKSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTDGIHITQSTNNPIIIDQFYCDSPNACETQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAAQGFGYGVVHPSADCLTSSDNDFAAKDQTQLPTEQHIVHTEL

Homology

[Close]

BLAST of Cp4.1LG09g05300 vs. ExPASy Swiss-Prot
Match: Q94AJ5 (Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g80170 PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 4.1e-60
Identity = 136/384 (35.42%), Postives = 187/384 (48.70%), Query Frame = 0


Query: 62  SRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSA-AKSVLLVPKEKRYLVNATTFKGPCN 121
           S  L++V +F A G+GVTDDT AF  AW+TACS+  K+ +LVP+    L+      GPC 
Sbjct: 49  SERLLHVGNFGAKGNGVTDDTKAFADAWKTACSSKVKTRILVPENYTCLLRPIDLSGPCK 108

Query: 122 DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 181
             + +QI GTIIAP++P+ W+    R+WL F  L+  T +G G ++G G++WW  SCK N
Sbjct: 109 ARLTLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWERSCKHN 168

Query: 182 KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD 241
            S PC+GAPTALT     N+RV+ L + +SQQMH  +     V I+ ++V +P  SPNTD
Sbjct: 169 HSNPCRGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTD 228

Query: 242 GIHITQS----------------------------------------------------- 301
           GIHI+ S                                                     
Sbjct: 229 GIHISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSKSWEEV 288

Query: 302 -----------------------------------------TNNPIIIDQFYCDSPNACE 349
                                                     +NPIIIDQ+YCDS   C 
Sbjct: 289 RDITVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCA 348

[Close]

BLAST of Cp4.1LG09g05300 vs. ExPASy Swiss-Prot
Match: Q02096 (Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.7e-54
Identity = 126/362 (34.81%), Postives = 169/362 (46.69%), Query Frame = 0


Query: 54  PVWKSERGSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNAT 113
           PV   E    + ++VD F A GDG TDDT AF KAW+ ACS+  SVL+VP+ K YL+   
Sbjct: 73  PVGGPETSPDTDISVDDFGARGDG-TDDTKAFEKAWKDACSSG-SVLIVPENKNYLLKQI 132

Query: 114 TFKGPCNDGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWW 173
           TF GPC   + ++I GTI A  +   W     ++W+EF  ++  T +G G  +G+GE WW
Sbjct: 133 TFSGPCKSDLRVKIRGTIEASSDQSDWVGHNRKRWIEFEDISNLTLEGGGTSNGNGETWW 192

Query: 174 AESCKKNKSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSP 233
             SCK+ KS PCK APTALT  S  N+ V  L+I++SQ+MH +  + + V  + + V++P
Sbjct: 193 DSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIASNLMVTAP 252

Query: 234 GDSPNTDGIHIT------------------------------------------------ 293
             SPNTDGIHIT                                                
Sbjct: 253 EHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESGSKMVIATNITCGPGHGISIGSLGD 312

Query: 294 ----------------------------------------------QSTNNPIIIDQFYC 322
                                                          +  NPIIIDQ+YC
Sbjct: 313 RNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGSGSAKNIKFQNIVMHNVTNPIIIDQYYC 372

[Close]

BLAST of Cp4.1LG09g05300 vs. ExPASy Swiss-Prot
Match: Q9FY19 (Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.0e-50
Identity = 122/375 (32.53%), Postives = 169/375 (45.07%), Query Frame = 0


Query: 65  LMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCNDGMI 124
           + NV+ + AVGDG  D T AF K W  AC+   +V LVP  K+++VN   F GPC     
Sbjct: 59  VFNVEHYGAVGDGKHDSTDAFEKTWNAACNKLSAVFLVPANKKFVVNNLVFYGPCQPHFS 118

Query: 125 IQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKNKSRP 184
            +++GTI A  +P KW  K  + W+ F +L      G GVIDG G +WW++ CK    R 
Sbjct: 119 FKVDGTIAAYPDPAKW--KNSKIWMHFARLTDFNLMGTGVIDGQGNRWWSDQCKTINGRT 178

Query: 185 C---KGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTDG 244
               KG PTA+ ID S ++ VK LT+ NS + H      + V+I  +++ +P DSPNTDG
Sbjct: 179 VCNDKGRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDG 238

Query: 245 I----------------------------------------------------------- 304
           I                                                           
Sbjct: 239 IDIFASKRFEIEKCTIGTGDDCVAVGTGSSNITIKDLTCGPGHGMSIGSLGKGNSRSEVS 298

Query: 305 -----------------------------HITQ------STNNPIIIDQFYCDSPNACET 342
                                        HIT       +  NPI+I+QFYC S  AC+ 
Sbjct: 299 FVHLDGAKFIDTQNGLRIKTWQGGSGLASHITYENVEMINAENPILINQFYCTSAAACKN 358

[Close]

BLAST of Cp4.1LG09g05300 vs. ExPASy Swiss-Prot
Match: P35336 (Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.0e-50
Identity = 123/366 (33.61%), Postives = 168/366 (45.90%), Query Frame = 0


Query: 66  MNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCNDGMII 125
           +NVD F A GDG  DDT AF KAW+ ACS+  S +L+  +K YLV   +F GPC  G+ +
Sbjct: 90  VNVDDFGAKGDG-RDDTKAFEKAWKAACSSTSSAVLLVPKKNYLVRPISFSGPCKSGLTM 149

Query: 126 QIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKNKSRPC 185
           QI GTI A D+   +  K  R WL F  +     +G G I+G+G+ WW  SCK NK+ PC
Sbjct: 150 QIYGTIEASDDRSDY-RKDGRHWLVFDSVQNLRVEGGGTINGNGKIWWQNSCKTNKALPC 209

Query: 186 KGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTDGIHIT 245
           K APTALT   S ++ VK L I+N+QQ+H +      V+ + + V++P +SPNTDGIH+T
Sbjct: 210 KDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIHVT 269

Query: 246 QSTN-------------------------------------------------------- 305
            + N                                                        
Sbjct: 270 GTQNIHISSCVIGTGDDCISIVNGSRKVRVNDITCGPGHGISIGSLGYGNSEAHVSDVVV 329

Query: 306 --------------------------------------NPIIIDQFYCDSPNACETQTSA 337
                                                 NPIIIDQ YCD    C+ Q+SA
Sbjct: 330 NGAKLCGTTNGVRIKTWQGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQSSA 389

[Close]

BLAST of Cp4.1LG09g05300 vs. ExPASy Swiss-Prot
Match: Q7M1E7 (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.8e-50
Identity = 121/378 (32.01%), Postives = 174/378 (46.03%), Query Frame = 0


Query: 58  SERGSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKG 117
           S   + ++ NV+ + AVGDG  D T AF   W  AC  A +VLLVP  K++ VN   F+G
Sbjct: 51  SRHDAATVFNVEQYGAVGDGKHDSTEAFATTWNAACKKASAVLLVPANKKFFVNNLVFRG 110

Query: 118 PCNDGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESC 177
           PC   +  +++GTI+A  +P +W  K  + WL+F +L      G GVIDG G++WWA  C
Sbjct: 111 PCQPHLSFKVDGTIVAQPDPARW--KNSKIWLQFAQLTDFNLMGTGVIDGQGQQWWAGQC 170

Query: 178 KKNKSRPC---KGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPG 237
           K    R     +  PTA+ ID S ++ VK LT+ NS + H      E V+I  +++ +P 
Sbjct: 171 KVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPR 230

Query: 238 DSPNTDGIHI-----------------------TQSTN---------------------- 297
           DSPNTDGI I                       T S+N                      
Sbjct: 231 DSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTGSSNITIKDLICGPGHGISIGSLGRD 290

Query: 298 -------------------------------------------------NPIIIDQFYCD 338
                                                            NPI+I+QFYC 
Sbjct: 291 NSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLASYITYENVEMINSENPILINQFYCT 350

[Close]

BLAST of Cp4.1LG09g05300 vs. NCBI nr
Match: XP_023542310.1 (probable polygalacturonase At1g80170 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 700 bits (1806), Expect = 4.36e-252
Identity = 367/461 (79.61%), Postives = 367/461 (79.61%), Query Frame = 0


Query: 1   MDKFFLLPLLSLLIIAYGVSCSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER 60
           MDKFFLLPLLSLLIIAYGVSCSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER
Sbjct: 1   MDKFFLLPLLSLLIIAYGVSCSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER 60

Query: 61  GSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCN 120
           GSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCN
Sbjct: 61  GSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCN 120

Query: 121 DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 180
           DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN
Sbjct: 121 DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 180

Query: 181 KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD 240
           KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD
Sbjct: 181 KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD 240

Query: 241 GIHITQSTN--------------------------------------------------- 300
           GIHITQSTN                                                   
Sbjct: 241 GIHITQSTNVVVQNCKISTGDDCISIVNASSGIKMKGISCGPGHGISIGSLGKDNSAGIV 300

Query: 301 -------------------------------------------NPIIIDQFYCDSPNACE 360
                                                      NPIIIDQFYCDSPNACE
Sbjct: 301 SKVVLDTAFLRETTNGVRIKTWQGGSGYVRAVRFENVRMQDVENPIIIDQFYCDSPNACE 360

Query: 361 TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA 367
           TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA
Sbjct: 361 TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA 420

[Close]

BLAST of Cp4.1LG09g05300 vs. NCBI nr
Match: KAG6573734.1 (putative polygalacturonase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 695 bits (1793), Expect = 4.17e-250
Identity = 365/461 (79.18%), Postives = 366/461 (79.39%), Query Frame = 0


Query: 1   MDKFFLLPLLSLLIIAYGVSCSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER 60
           MDKFFLLPLLSLLIIAYGVS SIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER
Sbjct: 1   MDKFFLLPLLSLLIIAYGVSGSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER 60

Query: 61  GSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCN 120
           GSRSLMNVDSFDAVGDG+TDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCN
Sbjct: 61  GSRSLMNVDSFDAVGDGITDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCN 120

Query: 121 DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 180
           DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN
Sbjct: 121 DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 180

Query: 181 KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD 240
           KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD
Sbjct: 181 KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD 240

Query: 241 GIHITQSTN--------------------------------------------------- 300
           GIHITQSTN                                                   
Sbjct: 241 GIHITQSTNVVVQNCKISTGDDCISIVNASSGIKMKGISCGPGHGISIGSLGKDNSAGIV 300

Query: 301 -------------------------------------------NPIIIDQFYCDSPNACE 360
                                                      NPIIIDQFYCDSPNACE
Sbjct: 301 SKVVLDTAFLRETTNGVRIKTWQGGSGYVRAVRFENVRMQDVENPIIIDQFYCDSPNACE 360

Query: 361 TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA 367
           TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA
Sbjct: 361 TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA 420

[Close]

BLAST of Cp4.1LG09g05300 vs. NCBI nr
Match: XP_022944797.1 (probable polygalacturonase At1g80170 [Cucurbita moschata])

HSP 1 Score: 692 bits (1787), Expect = 3.42e-249
Identity = 364/461 (78.96%), Postives = 365/461 (79.18%), Query Frame = 0


Query: 1   MDKFFLLPLLSLLIIAYGVSCSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER 60
           MDKFFLLPLLSLLIIAYGVS SIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER
Sbjct: 1   MDKFFLLPLLSLLIIAYGVSGSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER 60

Query: 61  GSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCN 120
           GSRSLMNVDSFDAVGDG+TDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCN
Sbjct: 61  GSRSLMNVDSFDAVGDGITDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCN 120

Query: 121 DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 180
           DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN
Sbjct: 121 DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 180

Query: 181 KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD 240
           KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD
Sbjct: 181 KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD 240

Query: 241 GIHITQSTN--------------------------------------------------- 300
           GIHITQS N                                                   
Sbjct: 241 GIHITQSMNVVVQNCKISTGDDCISIVNASSGIKMKGISCGPGHGISIGSLGKDNSAGIV 300

Query: 301 -------------------------------------------NPIIIDQFYCDSPNACE 360
                                                      NPIIIDQFYCDSPNACE
Sbjct: 301 SKVVLDTAFLRETTNGVRIKTWQGGSGYVRAIRFENVRMQDVENPIIIDQFYCDSPNACE 360

Query: 361 TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA 367
           TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA
Sbjct: 361 TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA 420

[Close]

BLAST of Cp4.1LG09g05300 vs. NCBI nr
Match: KAG7012807.1 (putative polygalacturonase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 692 bits (1787), Expect = 3.42e-249
Identity = 364/461 (78.96%), Postives = 365/461 (79.18%), Query Frame = 0


Query: 1   MDKFFLLPLLSLLIIAYGVSCSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER 60
           MDKFFLLPLLSLLIIAYGVS SIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER
Sbjct: 1   MDKFFLLPLLSLLIIAYGVSGSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER 60

Query: 61  GSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCN 120
           GSRSLMNVDSFDAVGDG+TDDTMAFRKAWETACSAAKSVLLVPKEK YLVNATTFKGPCN
Sbjct: 61  GSRSLMNVDSFDAVGDGITDDTMAFRKAWETACSAAKSVLLVPKEKTYLVNATTFKGPCN 120

Query: 121 DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 180
           DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN
Sbjct: 121 DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 180

Query: 181 KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD 240
           KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD
Sbjct: 181 KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD 240

Query: 241 GIHITQSTN--------------------------------------------------- 300
           GIHITQSTN                                                   
Sbjct: 241 GIHITQSTNVVVQNCKISTGDDCISIVNASSGIKMKGISCGPGHGISIGSLGKDNSAGIV 300

Query: 301 -------------------------------------------NPIIIDQFYCDSPNACE 360
                                                      NPIIIDQFYCDSPNACE
Sbjct: 301 SKVVLDTAFLRETTNGVRIKTWQGGSGYVRAVRFENVRMQDVENPIIIDQFYCDSPNACE 360

Query: 361 TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA 367
           TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA
Sbjct: 361 TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA 420

[Close]

BLAST of Cp4.1LG09g05300 vs. NCBI nr
Match: XP_022966897.1 (probable polygalacturonase At1g80170 [Cucurbita maxima])

HSP 1 Score: 691 bits (1783), Expect = 3.00e-248
Identity = 365/464 (78.66%), Postives = 367/464 (79.09%), Query Frame = 0


Query: 1   MDKFFLLPLL---SLLIIAYGVSCSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWK 60
           MDKFFLLPLL   SLLIIAYGVSCSIDPESDIDMVKEL+TF+IEEQDDNVVDTYAIPVWK
Sbjct: 19  MDKFFLLPLLPLLSLLIIAYGVSCSIDPESDIDMVKELKTFNIEEQDDNVVDTYAIPVWK 78

Query: 61  SERGSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKG 120
           SERGSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKG
Sbjct: 79  SERGSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKG 138

Query: 121 PCNDGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESC 180
           PCNDGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESC
Sbjct: 139 PCNDGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESC 198

Query: 181 KKNKSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSP 240
           KKNKSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSP
Sbjct: 199 KKNKSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSP 258

Query: 241 NTDGIHITQSTN------------------------------------------------ 300
           NTDGIHITQSTN                                                
Sbjct: 259 NTDGIHITQSTNVVVQNCKISTGDDCISIVNASSGIKMKGISCGPGHGISIGSLGKDNSA 318

Query: 301 ----------------------------------------------NPIIIDQFYCDSPN 360
                                                         NPIIIDQFYCDSPN
Sbjct: 319 GIVSKVVLDTAFLRETTNGVRIKTWQGGSGYVRAVRFENVRMQDVENPIIIDQFYCDSPN 378

Query: 361 ACETQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYC 367
           ACETQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYC
Sbjct: 379 ACETQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYC 438

[Close]

BLAST of Cp4.1LG09g05300 vs. ExPASy TrEMBL
Match: A0A6J1FZ30 (probable polygalacturonase At1g80170 OS=Cucurbita moschata OX=3662 GN=LOC111449225 PE=3 SV=1)

HSP 1 Score: 692 bits (1787), Expect = 1.65e-249
Identity = 364/461 (78.96%), Postives = 365/461 (79.18%), Query Frame = 0


Query: 1   MDKFFLLPLLSLLIIAYGVSCSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER 60
           MDKFFLLPLLSLLIIAYGVS SIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER
Sbjct: 1   MDKFFLLPLLSLLIIAYGVSGSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER 60

Query: 61  GSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCN 120
           GSRSLMNVDSFDAVGDG+TDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCN
Sbjct: 61  GSRSLMNVDSFDAVGDGITDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCN 120

Query: 121 DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 180
           DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN
Sbjct: 121 DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 180

Query: 181 KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD 240
           KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD
Sbjct: 181 KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD 240

Query: 241 GIHITQSTN--------------------------------------------------- 300
           GIHITQS N                                                   
Sbjct: 241 GIHITQSMNVVVQNCKISTGDDCISIVNASSGIKMKGISCGPGHGISIGSLGKDNSAGIV 300

Query: 301 -------------------------------------------NPIIIDQFYCDSPNACE 360
                                                      NPIIIDQFYCDSPNACE
Sbjct: 301 SKVVLDTAFLRETTNGVRIKTWQGGSGYVRAIRFENVRMQDVENPIIIDQFYCDSPNACE 360

Query: 361 TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA 367
           TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA
Sbjct: 361 TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA 420

[Close]

BLAST of Cp4.1LG09g05300 vs. ExPASy TrEMBL
Match: A0A6J1HP82 (probable polygalacturonase At1g80170 OS=Cucurbita maxima OX=3661 GN=LOC111466464 PE=3 SV=1)

HSP 1 Score: 691 bits (1783), Expect = 1.45e-248
Identity = 365/464 (78.66%), Postives = 367/464 (79.09%), Query Frame = 0


Query: 1   MDKFFLLPLL---SLLIIAYGVSCSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWK 60
           MDKFFLLPLL   SLLIIAYGVSCSIDPESDIDMVKEL+TF+IEEQDDNVVDTYAIPVWK
Sbjct: 19  MDKFFLLPLLPLLSLLIIAYGVSCSIDPESDIDMVKELKTFNIEEQDDNVVDTYAIPVWK 78

Query: 61  SERGSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKG 120
           SERGSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKG
Sbjct: 79  SERGSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKG 138

Query: 121 PCNDGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESC 180
           PCNDGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESC
Sbjct: 139 PCNDGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESC 198

Query: 181 KKNKSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSP 240
           KKNKSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSP
Sbjct: 199 KKNKSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSP 258

Query: 241 NTDGIHITQSTN------------------------------------------------ 300
           NTDGIHITQSTN                                                
Sbjct: 259 NTDGIHITQSTNVVVQNCKISTGDDCISIVNASSGIKMKGISCGPGHGISIGSLGKDNSA 318

Query: 301 ----------------------------------------------NPIIIDQFYCDSPN 360
                                                         NPIIIDQFYCDSPN
Sbjct: 319 GIVSKVVLDTAFLRETTNGVRIKTWQGGSGYVRAVRFENVRMQDVENPIIIDQFYCDSPN 378

Query: 361 ACETQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYC 367
           ACETQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYC
Sbjct: 379 ACETQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYC 438

[Close]

BLAST of Cp4.1LG09g05300 vs. ExPASy TrEMBL
Match: A0A1S3BF58 (probable polygalacturonase At1g80170 OS=Cucumis melo OX=3656 GN=LOC103489000 PE=3 SV=1)

HSP 1 Score: 629 bits (1621), Expect = 1.57e-223
Identity = 329/469 (70.15%), Postives = 348/469 (74.20%), Query Frame = 0


Query: 1   MDKFFLLPLLSLLIIAYGVSCSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER 60
           MDK FLL LL LLIIAYGVS +   +SDIDM++ELE+FDIEE+DD+VV +Y +P W+SER
Sbjct: 38  MDKLFLLSLLGLLIIAYGVSGTFVSDSDIDMIEELESFDIEEEDDDVVYSYTVPAWRSER 97

Query: 61  GSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCN 120
           GS+ LMNVDSFDAVGDGVTDDTMAFRKAWETACS +KSVLLVPKEKRYLVNATTFKGPC 
Sbjct: 98  GSKILMNVDSFDAVGDGVTDDTMAFRKAWETACSTSKSVLLVPKEKRYLVNATTFKGPCK 157

Query: 121 DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 180
           DGM+IQIEGTI+APDEPE WDPK PRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN
Sbjct: 158 DGMVIQIEGTIVAPDEPELWDPKFPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 217

Query: 181 KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD 240
           KSRPCKGAPTA TIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVS+PGDSPNTD
Sbjct: 218 KSRPCKGAPTAFTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSAPGDSPNTD 277

Query: 241 GIHITQSTN--------------------------------------------------- 300
           GIHITQSTN                                                   
Sbjct: 278 GIHITQSTNVVVQNSKISTGDDCISIVNASSGIKMKGISCGPGHGISIGSLGKDNSTGIV 337

Query: 301 -------------------------------------------NPIIIDQFYCDSPNACE 360
                                                      NPIIIDQFYCDSP  CE
Sbjct: 338 TKVVLDTAFLRETTNGVRIKTWQGGSGYVRSVRFENVRMEDVENPIIIDQFYCDSPTTCE 397

Query: 361 TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA 367
           TQTSA+K+SQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA
Sbjct: 398 TQTSAVKISQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA 457

[Close]

BLAST of Cp4.1LG09g05300 vs. ExPASy TrEMBL
Match: A0A0A0KQ65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G600960 PE=3 SV=1)

HSP 1 Score: 619 bits (1596), Expect = 2.63e-220
Identity = 325/469 (69.30%), Postives = 345/469 (73.56%), Query Frame = 0


Query: 1   MDKFFLLPLLSLLIIAYGVSCSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER 60
           MDK FLL LL L IIAYGVS +   +SDIDM+KELE+FDIEE+DD+ V +Y +PVW+SER
Sbjct: 1   MDKLFLLSLLGLFIIAYGVSGAFVSDSDIDMIKELESFDIEEEDDDDVYSYTVPVWRSER 60

Query: 61  GSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCN 120
           GS+ LMNVDSFDA+GDGVTDDTMAFRKAWETACS +KSVLLVPKEK YLVNATTFKGPC 
Sbjct: 61  GSKILMNVDSFDAIGDGVTDDTMAFRKAWETACSTSKSVLLVPKEKTYLVNATTFKGPCK 120

Query: 121 DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 180
           DGM+IQIEGTI+APDEPE WDPK PRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN
Sbjct: 121 DGMVIQIEGTIVAPDEPELWDPKFPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 180

Query: 181 KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD 240
           KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRIT VRVS+PGDSPNTD
Sbjct: 181 KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITGVRVSAPGDSPNTD 240

Query: 241 GIHITQSTN--------------------------------------------------- 300
           GIHITQSTN                                                   
Sbjct: 241 GIHITQSTNVVVQNCKISTGDDCISIVNASSGIKMKGISCGPGHGISIGSLGKDNSTGIV 300

Query: 301 -------------------------------------------NPIIIDQFYCDSPNACE 360
                                                      NPIIIDQFYCDSP  CE
Sbjct: 301 TKVVLDTAYLRETTNGVRIKTWQGGSGYVRAVRFENVRMEDVENPIIIDQFYCDSPTTCE 360

Query: 361 TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA 367
           +QTSA+K+SQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA
Sbjct: 361 SQTSAVKISQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA 420

[Close]

BLAST of Cp4.1LG09g05300 vs. ExPASy TrEMBL
Match: A0A6J1GXR9 (probable polygalacturonase At1g80170 OS=Cucurbita moschata OX=3662 GN=LOC111458447 PE=3 SV=1)

HSP 1 Score: 603 bits (1556), Expect = 3.10e-214
Identity = 317/469 (67.59%), Postives = 340/469 (72.49%), Query Frame = 0


Query: 1   MDKFFLLPLLSLLIIAYGVSCSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSER 60
           MDKFFLL LL +LII YGVS SI P+ DIDMVKELE+FDIEE+DD+ VDTYA+P W+SE 
Sbjct: 1   MDKFFLLSLLGMLIIVYGVSGSIVPDGDIDMVKELESFDIEEEDDSAVDTYAVPAWRSEH 60

Query: 61  GSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCN 120
           GS+ L+NVDSFDAVGDGVTDDTMAFRKAWETACS++ SVLLVPKE RYLVNAT FKGPC 
Sbjct: 61  GSKILINVDSFDAVGDGVTDDTMAFRKAWETACSSSNSVLLVPKEGRYLVNATKFKGPCK 120

Query: 121 DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 180
            GM+IQIEGTI+APDEPE WDPKLPRQWLEFTKL AATFQGDG+IDGSGEKWWAESCKKN
Sbjct: 121 HGMVIQIEGTIVAPDEPENWDPKLPRQWLEFTKLTAATFQGDGIIDGSGEKWWAESCKKN 180

Query: 181 KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD 240
           KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHF IARS+TVR++EVRVS+PGDSPNTD
Sbjct: 181 KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFIIARSKTVRVSEVRVSAPGDSPNTD 240

Query: 241 GIHITQSTN--------------------------------------------------- 300
           GIHITQSTN                                                   
Sbjct: 241 GIHITQSTNVVVENCKISTGDDCISIVNASSGIKMKRISCGPGHGISIGSLGKDNSTGIV 300

Query: 301 -------------------------------------------NPIIIDQFYCDSPNACE 360
                                                      NPIIIDQFYCD    CE
Sbjct: 301 TKVVLDTAFLRETTNGVRIKTWQGGSGYVRAVRFENVRMENVENPIIIDQFYCDH-TTCE 360

Query: 361 TQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHAA 367
            Q SA+K+SQIMYRNISGTTTSKNAMKFACSDS PCSNIILSNVNLEKTDGTVETYCHAA
Sbjct: 361 PQASAVKISQIMYRNISGTTTSKNAMKFACSDSFPCSNIILSNVNLEKTDGTVETYCHAA 420

[Close]

BLAST of Cp4.1LG09g05300 vs. TAIR 10
Match: AT1G23460.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 430.6 bits (1106), Expect = 1.2e-120
Identity = 231/462 (50.00%), Postives = 279/462 (60.39%), Query Frame = 0


Query: 1   MDKFFLLPLLSLLII-AYGVSCSIDPESDIDMVKELETFDIEEQDDNVVDTYAIPVWKSE 60
           MDK F+L LL LL++ AYG +  +   +D+D++ ELE FD+   DD+       P + S 
Sbjct: 2   MDKLFILSLLGLLLVTAYGAAGKM-VYTDLDILDELENFDVLVDDDDDTKLLDWPSFTSR 61

Query: 61  RGSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPC 120
              ++L+NVD+F A GDGV+DDT AF  AW  ACS +KSV LVP+ +RYLVNAT F GPC
Sbjct: 62  HSGKNLVNVDTFGAAGDGVSDDTQAFVSAWSKACSTSKSVFLVPEGRRYLVNATKFNGPC 121

Query: 121 NDGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKK 180
              +IIQI+GTI+APDEP  WD K  R WLEF+KL    FQG GVIDGSG KWWA SCKK
Sbjct: 122 EQKLIIQIDGTIVAPDEPSNWDSKFQRIWLEFSKLKGVVFQGKGVIDGSGSKWWAASCKK 181

Query: 181 NKSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNT 240
           NKS PCK APTALTI+SSS ++V GLTIQNSQQM+F IARS++VR+++V VSSPGDSPNT
Sbjct: 182 NKSNPCKSAPTALTIESSSGVKVSGLTIQNSQQMNFIIARSDSVRVSKVMVSSPGDSPNT 241

Query: 241 DGIHITQSTN-------------------------------------------------- 300
           DGIHIT STN                                                  
Sbjct: 242 DGIHITGSTNVILQDCKIGTGDDCVSIVNASSNIKMKNIYCGPGHGISIGSLGKDNTTGI 301

Query: 301 --------------------------------------------NPIIIDQFYCDSPNAC 360
                                                       NPI+IDQFYCDSP  C
Sbjct: 302 VTQVVLDTALLRETTNGLRIKTYQGGSGYVQGIRFTNVEMQDVANPILIDQFYCDSPTTC 361

Query: 361 ETQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCHA 368
           + QTSA+K+SQIMYRNI+GTT S  A+KFACSD+VPCS+I+L+NVNLE  DG VE YC++
Sbjct: 362 QNQTSAVKISQIMYRNITGTTKSAKAIKFACSDTVPCSHIVLNNVNLEGNDGQVEAYCNS 421

[Close]

BLAST of Cp4.1LG09g05300 vs. TAIR 10
Match: AT1G70500.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 406.8 bits (1044), Expect = 1.9e-113
Identity = 221/461 (47.94%), Postives = 280/461 (60.74%), Query Frame = 0


Query: 1   MDKFFLLPLLSLLIIA-YGVSCSIDPESDIDMVKELETFDIEEQD-DNVVDTYAIPVWKS 60
           M K F++ L +LL++A YG +  +    ++D++ +LE  D+ E D ++ V  +    + S
Sbjct: 1   MIKPFIISLFALLMVASYGATGKM-LFKELDILGKLENLDVPEDDIEDDVTFFDFSSFTS 60

Query: 61  ERGSRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGP 120
           +   ++L+NVDSF+A GDGV+DDT AF +AW  ACSA  SVLLVP+ + YLVNAT F GP
Sbjct: 61  QYSGKNLVNVDSFNASGDGVSDDTQAFIRAWTMACSAPNSVLLVPQGRSYLVNATKFDGP 120

Query: 121 CNDGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCK 180
           C + +IIQI+GTIIAPDEP +WDPK PR WL+F+KL    FQG+GVIDGSG KWWA SCK
Sbjct: 121 CQEKLIIQIDGTIIAPDEPSQWDPKFPRNWLQFSKLQGVVFQGNGVIDGSGTKWWAASCK 180

Query: 181 KNKSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPN 240
           KNKS PC GAPTALTI SSSN+ V+GLTI+NSQQMH  I RS TVRI+ V V+SPGDSPN
Sbjct: 181 KNKSNPCVGAPTALTIYSSSNVYVRGLTIRNSQQMHLIIQRSTTVRISRVMVTSPGDSPN 240

Query: 241 TDGIHITQSTN------------------------------------------------- 300
           TDGIHIT ST+                                                 
Sbjct: 241 TDGIHITASTDVVVQDSKISTGDDCVSIVNGSAKIKMKRIYCGPGHGISIGSLGQGHSKG 300

Query: 301 ---------------------------------------------NPIIIDQFYCDSPNA 360
                                                        NPIIIDQFYCDSP+ 
Sbjct: 301 TVTAVVLETAFLKNTTNGLRIKTWQGGNGYVKGVRFENVVMQDVANPIIIDQFYCDSPST 360

Query: 361 CETQTSAIKVSQIMYRNISGTTTSKNAMKFACSDSVPCSNIILSNVNLEKTDGTVETYCH 366
           C+ QTSA+ +S+IMYRNI+GTT S  A+ F CSD+VPCS+I+L+N+NLE  DG VE YC+
Sbjct: 361 CQNQTSAVHISEIMYRNITGTTKSSKAINFKCSDAVPCSHIVLNNINLEGNDGKVEAYCN 420

[Close]

BLAST of Cp4.1LG09g05300 vs. TAIR 10
Match: AT1G80170.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 233.4 bits (594), Expect = 2.9e-61
Identity = 136/384 (35.42%), Postives = 187/384 (48.70%), Query Frame = 0


Query: 62  SRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSA-AKSVLLVPKEKRYLVNATTFKGPCN 121
           S  L++V +F A G+GVTDDT AF  AW+TACS+  K+ +LVP+    L+      GPC 
Sbjct: 49  SERLLHVGNFGAKGNGVTDDTKAFADAWKTACSSKVKTRILVPENYTCLLRPIDLSGPCK 108

Query: 122 DGMIIQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 181
             + +QI GTIIAP++P+ W+    R+WL F  L+  T +G G ++G G++WW  SCK N
Sbjct: 109 ARLTLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWERSCKHN 168

Query: 182 KSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTD 241
            S PC+GAPTALT     N+RV+ L + +SQQMH  +     V I+ ++V +P  SPNTD
Sbjct: 169 HSNPCRGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTD 228

Query: 242 GIHITQS----------------------------------------------------- 301
           GIHI+ S                                                     
Sbjct: 229 GIHISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSKSWEEV 288

Query: 302 -----------------------------------------TNNPIIIDQFYCDSPNACE 349
                                                     +NPIIIDQ+YCDS   C 
Sbjct: 289 RDITVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCA 348

[Close]

BLAST of Cp4.1LG09g05300 vs. TAIR 10
Match: AT2G41850.1 (polygalacturonase abscission zone A. thaliana )

HSP 1 Score: 196.4 bits (498), Expect = 3.9e-50
Identity = 124/371 (33.42%), Postives = 175/371 (47.17%), Query Frame = 0


Query: 66  MNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSV-LLVPKEKRYLVNATTFKGPCNDGMI 125
           ++V  F A GDG TDDT AF  AW+ ACS+  +V LLVPK   YL+ +    GPCN  + 
Sbjct: 68  VSVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYLLKSIQLTGPCNSILT 127

Query: 126 IQIEGTIIAPDEPEKWDPKLPRQWLEFTKLNAATFQG--DGVIDGSGEKWWAESCKKNKS 185
           +QI GT+ A    ++ D K   +W+ F  +N  +  G   GV+DG+GE WW  SCK+NK+
Sbjct: 128 VQIFGTLSA--SQKRSDYKDISKWIMFDGVNNLSVDGGDTGVVDGNGETWWQNSCKRNKA 187

Query: 186 RPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSPGDSPNTDGI 245
           +PC  APTALT  +S ++ VK L ++N+QQ+  +I +   V+++ V V++P DSPNTDGI
Sbjct: 188 KPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGI 247

Query: 246 HITQSTN----------------------------------------------------- 305
           HIT + N                                                     
Sbjct: 248 HITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISIGSLGDDNSKAFVSG 307

Query: 306 -----------------------------------------NPIIIDQFYCDSPNACETQ 340
                                                    NPIIIDQ YCD  + C T+
Sbjct: 308 VTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIIIDQDYCDK-SKCTTE 367

[Close]

BLAST of Cp4.1LG09g05300 vs. TAIR 10
Match: AT1G48100.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 195.3 bits (495), Expect = 8.7e-50
Identity = 123/385 (31.95%), Postives = 175/385 (45.45%), Query Frame = 0


Query: 62  SRSLMNVDSFDAVGDGVTDDTMAFRKAWETACSAAKSVLLVPKEKRYLVNATTFKGPCND 121
           S  + +V SF AVGDG  DDT AF+ AW+ AC+    V+L P+   + + +T F GPC  
Sbjct: 76  SGCVFDVTSFGAVGDGSCDDTAAFQDAWKAACAVESGVVLAPEGGVFKITSTIFSGPCKP 135

Query: 122 GMIIQIEGTIIAPDEPEKWDPK-LPRQWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKN 181
           G++ Q++G ++ PD PE+W  K    QWL F +L+  TF G G ++G+G+KWW   CK +
Sbjct: 136 GLVFQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWDLPCKPH 195

Query: 182 K-------SRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITEVRVSSP 241
           +       S PC  +PT +    S+NI VKGL IQNS Q H      + V I E+++SSP
Sbjct: 196 RGPDGSSSSGPC-ASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSP 255

Query: 242 GDSPNTDGIHI------------------------------------------------- 301
             SPNTDGIH+                                                 
Sbjct: 256 KLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGV 315

Query: 302 ---------------------------------------------TQSTNNPIIIDQFYC 342
                                                         ++  N II+DQ+YC
Sbjct: 316 HNSQACVSNITVRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYYC 375

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g05300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AJ5	4.1e-60	35.42	Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g8017...	[more]
Q02096	5.7e-54	34.81	Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1	[more]
Q9FY19	1.0e-50	32.53	Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1	[more]
P35336	1.0e-50	33.61	Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1	[more]
Q7M1E7	3.8e-50	32.01	Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1	[more]

BLAST of Cp4.1LG09g05300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542310.1	4.36e-252	79.61	probable polygalacturonase At1g80170 [Cucurbita pepo subsp. pepo]	[more]
KAG6573734.1	4.17e-250	79.18	putative polygalacturonase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022944797.1	3.42e-249	78.96	probable polygalacturonase At1g80170 [Cucurbita moschata]	[more]
KAG7012807.1	3.42e-249	78.96	putative polygalacturonase, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022966897.1	3.00e-248	78.66	probable polygalacturonase At1g80170 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG09g05300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZ30	1.65e-249	78.96	probable polygalacturonase At1g80170 OS=Cucurbita moschata OX=3662 GN=LOC1114492...	[more]
A0A6J1HP82	1.45e-248	78.66	probable polygalacturonase At1g80170 OS=Cucurbita maxima OX=3661 GN=LOC111466464...	[more]
A0A1S3BF58	1.57e-223	70.15	probable polygalacturonase At1g80170 OS=Cucumis melo OX=3656 GN=LOC103489000 PE=...	[more]
A0A0A0KQ65	2.63e-220	69.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G600960 PE=3 SV=1	[more]
A0A6J1GXR9	3.10e-214	67.59	probable polygalacturonase At1g80170 OS=Cucurbita moschata OX=3662 GN=LOC1114584...	[more]

BLAST of Cp4.1LG09g05300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23460.1	1.2e-120	50.00	Pectin lyase-like superfamily protein	[more]
AT1G70500.1	1.9e-113	47.94	Pectin lyase-like superfamily protein	[more]
AT1G80170.1	2.9e-61	35.42	Pectin lyase-like superfamily protein	[more]
AT2G41850.1	3.9e-50	33.42	polygalacturonase abscission zone A. thaliana	[more]
AT1G48100.1	8.7e-50	31.95	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 96..249 e-value: 1.6E-33 score: 116.1
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 248..366 e-value: 2.0E-20 score: 75.1 coord: 55..247 e-value: 6.7E-52 score: 178.8
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 249..351 coord: 2..249
None	No IPR available	PANTHER	PTHR31375:SF166	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 249..351 coord: 2..249
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 63..341

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g05300.1	Cp4.1LG09g05300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0004650	polygalacturonase activity