Cp4.1LG09g05280 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g05280
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	polygalacturonase At1g48100-like
Location	Cp4.1LG09: 3379898 .. 3383963 (-)
RNA-Seq Expression	Cp4.1LG09g05280
Synteny	Cp4.1LG09g05280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGTTCTTGGAACATTGAGTTGTATTGCCAAAACCATGGGCGAAAACTACTATTTTTGTATCACTCCGTTCATGAATTGTATCCATCTTTTGCTTTATTGTCTGAAACAATAAGTGCAAAATCCTAAAGCACGTAGGCCATCCTTATTCAATCGAACATGTCAAAAACACCACCCTTACAATTAGCCCTCGTCTTCTTTTTTTTTCCTCTGCTCTTCTTTCTATGGTGAAGGTCATATATAGCTCTGTGGGGAATAAGGAGAAAGACAGAGAAAAGATTGGCCCGTGATAGTTGCATGTGACTATATATGATGAGCAGAAATATTTCAGTGTTGGCCCTTCATTTTTTTACCCTTACTGACCCACACATCACGTGTCCCACTTACGTCTGTTATCAACTATACTCCTCAATATAAGCTTAATTAATCATTTTACTTCCAATTACCCATAATCAGACCAACCTAGAGGTGAATCAGACAAACCGGGTACGGCCAATGTACAAAAGAATCTTGGCTGATCTTCATACATCTGGGTTATACTTATACGACGTCGTGTGACATGGTAAGTGACTGAGTTAAGGCTCTATAGCGGACACTGACCGAGTACATGGAGCTTGGGCAATAGTTTAAAATCCAAATGATAGCTTTGCTTAGCTTAGCTTCTATGGCTCGGCGTCTCCATGCATAGACTGGGTGGCGCTAGTTTTGAAGTTCCTTTATCTATTAAACAACCCATTTTTACCCATCTAAACTTGTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCTCTCTCTCAAATGTACATGAAAATGAAAGGGCTTAGTTTCAGAGGGCTCACATTTATGTTTATGGTGGCATTTCTTGTCTGGTCTTCTAGTTTGGGGGGCTGCCATGGGAGAGCCACAGGCAAGCATTGGAGCAAGAACAGAGTAGCCTCGGCCACTCACTCCTCCAAGAAAGGGAAGGCTCACAGTCACGGCGGCGGTCACAATGGCAACCGCCGTGGCGGTGCATCAAAGACAAAGCCACCGTCCACTAAGCCGAAACAAGATGTCCCTCCCAGCCTGCCGCCCCAGAAGGGCGGAGGAGGCTTCAAAGGCGGCCATTCTTCCATGTTTAACGTGCTCAATTTTGGAGCCAGAGGCGATGGAGTAACGGATGACACTAAGGTGAGAATTAATTCCATCCTCATGAAAATAGCTATGAACTTACAATTACAGAAGAGTACGAGTAATATACATGAATATATGCATTGTATATGTTGAATGGAAATGGTATTTTACGGAGAAGGGAAATGGAAAAGGTGATGGGCCCACTTAGGAAGGCGGAATCTCGTTACGGCAGTTGGGTCAGGATTTGAGCAAGAATAATTGGGCGGAGTAGGCAGCAACCTGAAACCCAACGCCAAGCAGTAAAGAACTCAATTACCGAGAGTAAATTAAGGTAAAAGTAAAATAATTATGTGCATCGCAGGCATTTCAGGACACCTGGAAAGCCAGTTGCAAGGTGGCAGCATCAACCTTCATCGTCCCATCAAACTACGTCTTTTTACTAAGCCCCATCTCCTTCTCTGGTCCGTACTGCCAACCCGATATTATATTCCAGGTACCTTCTCTTACCTTAATCATTTCCCATCAATGCTACAAATTACTCCACCTTAATTTACTTCGTGGTGATGAGGAATTAGAGTATTTGGATAGTTTCAAGTCAACTTTGAAGAGATACATAGCCTTCCGAGAGCATTAGATATGGATTATGAACACCATCCAACTTTTGTTATAACGATTCTCCACAGGGGTATGATATTGTCCACTTTGAGCATAAATTTTCATAGGTTTGCTTTGGACTTCTTCGAAAGGCCTACTACCAATAAAGATGTATTCCTTACCTATAGTCAATCATCATAAATTAGTCAACATTGGACTCCCTCCCAACAATTTTGAACAATTAGGAAGGCGTAGGGTGTAAAGCTGTTATAAAAGAAAATATATAATCCTATATCAATTGATTAGAGGACTTAACATTGCCTTGTTTTTAATATTTTCTATGTTGAATAAAAGTTGGACGGGACAATCATTGCACCGACGGACTTCAAAGTTTGGGGCAAAGGTCTATTACAATGGCTACAATTCACGAAGTTGATAGGACTTACCATACAAGGACATGGAGTTATTGATGGAAGGGGTTCAGTATGGTGGCATGTTTCACCTTTTCATGATCCCATTGACGATGAATCCAAACTATTTATCCCGCTCAACAGCACTGTACAAGAAAAGCCACCATTCCCAGTAACTAACCTTCTTCACAACCCTTATGGTTTCTAAGAATTCTCTACAGTATTTTTTCTCTAAATTCGTATAACCTATGGCAGGAAAGAAGTGAGCTTGTGGGAAAGGTGCCTAGCATCAAACCAACTGTGAGCGGCATACTAGATCCTTAAATTCCCCGAGCTCGTTTTATTGTTTGTGAAAGATCCCTTGACATGGCTCTGTTCTTTTGTTGTACAGGCCCTGAGGTTTTACGGAAGTTTTAACGTTACTGTCACTGGCATAAAAATTCAGAACAGCCCTCAATGCCACCTCAAGTTCGACAATTGCATTGGAGTGTTGGTTCATAATTTTAGTGTTTCATCTCCAGGTGACAGCCTCAATACTGATGGAATTCATCTGCAGAATTCCAAGGATGTGCTAATCCACAGCACCACTCTCTCTTGTGGTATGAATTACTTCGCATTGAATCATTATTCTTGTCACACTTATTGTCATTACGACTGACTGGCATAAATAAGAGCAAATCAATTCTAAGAACCCAAAGACGACTATCTACTCCGTAAGAAAACTCAATAGGATTTTTAATATCCTATGTCAGTAGCCATGTTCTGTTCTACTTTTTCAATCAAGAACAAAATCCAGGTAGTGAATTTTATGCATTTCAATTTATACATAAATTGGACGAAAACTAACTACTAGGTTTGATCTTTCACACAGGAGACGACTGTATTTCAATACAAACTGGTTGCTCAAATGTGTATATACACAACATCAATTGTGGGCCAGGACATGGAATCAGCATTGGAAGTCTAGGGAAGGACAACACAAAGGCTTGTGTTTCTAACATCACTGTCCGGGATGTAATTATGCACAACACAATGAATGGTGTCAGAATCAAAACGTGGCAGGTATTCCTTCCTGGCACAATTCACCTTTAGAATTAACTCATCAATAGTGCTAGCCTTAATCAGTTAAGAGAACGCCTTATTTTGGATTAGTCTGTTATCTATGGATCAAACTTAAGGAAGATAGAAACCTATAAGCAAATATACACTATTAAATCAAACTAGCTCTGTCGAAAATTGATTCCAAATTATGCATCTGCAGGGTGGATTAGGTTTTGTACAGGGAGTCCTTTTCTCAAATATTCAGGTTTCTGAAGTTAAGATACCAATAGTCATAGACCAATTCTACTGTGACAAAGCCAAATGCTCAAACCAAACTGAAGCTGTGGCTTTATCAGGAATAAACTACGAAAGAATAAGAGGTACTTACACAGTAAAGCCAGTACACTTTGCCTGTAGTGATAATCTGCCATGTACAGATATATCACTAACTGCAATAGAGCTCAAGCCACTTCAAGAACTCTATCACTTATACGGGGCTTTCTGCTGGCAAACTTTTGGAGAGTTGAGAACGCCTACTGTCCCACCAATTGATTGCTTACATATTGGGAAGCCATCAAGCAACCAAATCCAGTACGATTTTGATTCTTGTTGAGTGTGGAGTCGATTTTCATTGGTGTATTCACTTGTGTGGTTGGCATGATTTTCCAACCCCTTTTGACACCATGAACTTACGCTTGTACATTTTAGTAGTCCTGGTTCATAAGATTATTCAGCAAAAGTTATAGTTTTGCCCGTTGAGATAGGGACATGTTGCTCTGTCTATAGTGTAGTATTAGTATGCTGCTAGTTTGTCATGGCATGCTTCACTGGGCCGCATTATACTAAAGACTCTATGAAGGTTTCTAATAAATCCGTCTTTTTGTACTTC

mRNA sequence

AAATGTTCTTGGAACATTGAGTTGTATTGCCAAAACCATGGGCGAAAACTACTATTTTTGTATCACTCCGTTCATGAATTGTATCCATCTTTTGCTTTATTGTCTGAAACAATAAGTGCAAAATCCTAAAGCACGTAGGCCATCCTTATTCAATCGAACATGTCAAAAACACCACCCTTACAATTAGCCCTCGTCTTCTTTTTTTTTCCTCTGCTCTTCTTTCTATGGTGAAGGTCATATATAGCTCTGTGGGGAATAAGGAGAAAGACAGAGAAAAGATTGGCCCGTGATAGTTGCATGTGACTATATATGATGAGCAGAAATATTTCAGTGTTGGCCCTTCATTTTTTTACCCTTACTGACCCACACATCACGTGTCCCACTTACGTCTGTTATCAACTATACTCCTCAATATAAGCTTAATTAATCATTTTACTTCCAATTACCCATAATCAGACCAACCTAGAGGTGAATCAGACAAACCGGGTACGGCCAATGTACAAAAGAATCTTGGCTGATCTTCATACATCTGGGTTATACTTATACGACGTCGTGTGACATGGTAAGTGACTGAGTTAAGGCTCTATAGCGGACACTGACCGAGTACATGGAGCTTGGGCAATAGTTTAAAATCCAAATGATAGCTTTGCTTAGCTTAGCTTCTATGGCTCGGCGTCTCCATGCATAGACTGGGTGGCGCTAGTTTTGAAGTTCCTTTATCTATTAAACAACCCATTTTTACCCATCTAAACTTGTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCTCTCTCTCAAATGTACATGAAAATGAAAGGGCTTAGTTTCAGAGGGCTCACATTTATGTTTATGGTGGCATTTCTTGTCTGGTCTTCTAGTTTGGGGGGCTGCCATGGGAGAGCCACAGGCAAGCATTGGAGCAAGAACAGAGTAGCCTCGGCCACTCACTCCTCCAAGAAAGGGAAGGCTCACAGTCACGGCGGCGGTCACAATGGCAACCGCCGTGGCGGTGCATCAAAGACAAAGCCACCGTCCACTAAGCCGAAACAAGATGTCCCTCCCAGCCTGCCGCCCCAGAAGGGCGGAGGAGGCTTCAAAGGCGGCCATTCTTCCATGTTTAACGTGCTCAATTTTGGAGCCAGAGGCGATGGAGTAACGGATGACACTAAGGCATTTCAGGACACCTGGAAAGCCAGTTGCAAGGTGGCAGCATCAACCTTCATCGTCCCATCAAACTACGTCTTTTTACTAAGCCCCATCTCCTTCTCTGGTCCGTACTGCCAACCCGATATTATATTCCAGTTGGACGGGACAATCATTGCACCGACGGACTTCAAAGTTTGGGGCAAAGGTCTATTACAATGGCTACAATTCACGAAGTTGATAGGACTTACCATACAAGGACATGGAGTTATTGATGGAAGGGGTTCAGTATGGTGGCATGTTTCACCTTTTCATGATCCCATTGACGATGAATCCAAACTATTTATCCCGCTCAACAGCACTGTACAAGAAAAGCCACCATTCCCAGAAAGAAGTGAGCTTGTGGGAAAGGTGCCTAGCATCAAACCAACTGCCCTGAGGTTTTACGGAAGTTTTAACGTTACTGTCACTGGCATAAAAATTCAGAACAGCCCTCAATGCCACCTCAAGTTCGACAATTGCATTGGAGTGTTGGTTCATAATTTTAGTGTTTCATCTCCAGGTGACAGCCTCAATACTGATGGAATTCATCTGCAGAATTCCAAGGATGTGCTAATCCACAGCACCACTCTCTCTTGTGGTATGAATTACTTCGCATTGAATCATTATTCTTGTCACACTTATTGTCATTACGACTGACTGGCATAAATAAGAGCAAATCAATTCTAAGAACCCAAAGACGACTATCTACTCCGTAAGAAAACTCAATAGGATTTTTAATATCCTATGTCAGTAGCCATGTTCTGTTCTACTTTTTCAATCAAGAACAAAATCCAGGTAGTGAATTTTATGCATTTCAATTTATACATAAATTGGACGAAAACTAACTACTAGGTTTGATCTTTCACACAGGAGACGACTGTATTTCAATACAAACTGGTTGCTCAAATGTGTATATACACAACATCAATTGTGGGCCAGGACATGGAATCAGCATTGGAAGTCTAGGGAAGGACAACACAAAGGCTTGTGTTTCTAACATCACTGTCCGGGATGTAATTATGCACAACACAATGAATGGTGTCAGAATCAAAACGTGGCAGGGTGGATTAGGTTTTGTACAGGGAGTCCTTTTCTCAAATATTCAGGTTTCTGAAGTTAAGATACCAATAGTCATAGACCAATTCTACTGTGACAAAGCCAAATGCTCAAACCAAACTGAAGCTGTGGCTTTATCAGGAATAAACTACGAAAGAATAAGAGGTACTTACACAGTAAAGCCAGTACACTTTGCCTGTAGTGATAATCTGCCATGTACAGATATATCACTAACTGCAATAGAGCTCAAGCCACTTCAAGAACTCTATCACTTATACGGGGCTTTCTGCTGGCAAACTTTTGGAGAGTTGAGAACGCCTACTGTCCCACCAATTGATTGCTTACATATTGGGAAGCCATCAAGCAACCAAATCCAGTACGATTTTGATTCTTGTTGAGTGTGGAGTCGATTTTCATTGGTGTATTCACTTGTGTGGTTGGCATGATTTTCCAACCCCTTTTGACACCATGAACTTACGCTTGTACATTTTAGTAGTCCTGGTTCATAAGATTATTCAGCAAAAGTTATAGTTTTGCCCGTTGAGATAGGGACATGTTGCTCTGTCTATAGTGTAGTATTAGTATGCTGCTAGTTTGTCATGGCATGCTTCACTGGGCCGCATTATACTAAAGACTCTATGAAGGTTTCTAATAAATCCGTCTTTTTGTACTTC

Coding sequence (CDS)

ATGTACATGAAAATGAAAGGGCTTAGTTTCAGAGGGCTCACATTTATGTTTATGGTGGCATTTCTTGTCTGGTCTTCTAGTTTGGGGGGCTGCCATGGGAGAGCCACAGGCAAGCATTGGAGCAAGAACAGAGTAGCCTCGGCCACTCACTCCTCCAAGAAAGGGAAGGCTCACAGTCACGGCGGCGGTCACAATGGCAACCGCCGTGGCGGTGCATCAAAGACAAAGCCACCGTCCACTAAGCCGAAACAAGATGTCCCTCCCAGCCTGCCGCCCCAGAAGGGCGGAGGAGGCTTCAAAGGCGGCCATTCTTCCATGTTTAACGTGCTCAATTTTGGAGCCAGAGGCGATGGAGTAACGGATGACACTAAGGCATTTCAGGACACCTGGAAAGCCAGTTGCAAGGTGGCAGCATCAACCTTCATCGTCCCATCAAACTACGTCTTTTTACTAAGCCCCATCTCCTTCTCTGGTCCGTACTGCCAACCCGATATTATATTCCAGTTGGACGGGACAATCATTGCACCGACGGACTTCAAAGTTTGGGGCAAAGGTCTATTACAATGGCTACAATTCACGAAGTTGATAGGACTTACCATACAAGGACATGGAGTTATTGATGGAAGGGGTTCAGTATGGTGGCATGTTTCACCTTTTCATGATCCCATTGACGATGAATCCAAACTATTTATCCCGCTCAACAGCACTGTACAAGAAAAGCCACCATTCCCAGAAAGAAGTGAGCTTGTGGGAAAGGTGCCTAGCATCAAACCAACTGCCCTGAGGTTTTACGGAAGTTTTAACGTTACTGTCACTGGCATAAAAATTCAGAACAGCCCTCAATGCCACCTCAAGTTCGACAATTGCATTGGAGTGTTGGTTCATAATTTTAGTGTTTCATCTCCAGGTGACAGCCTCAATACTGATGGAATTCATCTGCAGAATTCCAAGGATGTGCTAATCCACAGCACCACTCTCTCTTGTGGTATGAATTACTTCGCATTGAATCATTATTCTTGTCACACTTATTGTCATTACGACTGA

Protein sequence

MYMKMKGLSFRGLTFMFMVAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSHGGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVTDDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFKVWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQEKPPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVLVHNFSVSSPGDSLNTDGIHLQNSKDVLIHSTTLSCGMNYFALNHYSCHTYCHYD

Homology

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BLAST of Cp4.1LG09g05280 vs. ExPASy Swiss-Prot
Match: Q949Z1 (Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.4e-40
Identity = 104/283 (36.75%), Postives = 140/283 (49.47%), Query Frame = 0


Query: 54  KGKAHSHGGGHNGNRRGGASKTKPPSTKPKQDVPPSLP---PQKGGGGFKGGHSSMFNVL 113
           + + H H G H            P  T    D  PS P   P    G    G   +F+V 
Sbjct: 26  RARYHYHKGRHGVTHPLPPPPPPPLETANPPDQVPSDPYPSPDPAPGDSDSG--CVFDVT 85

Query: 114 NFGARGDGVTDDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLD 173
           +FGA GDG  DDT AFQD WKA+C V +   + P   VF ++   FSGP C+P ++FQLD
Sbjct: 86  SFGAVGDGSCDDTAAFQDAWKAACAVESGVVLAPEGGVFKITSTIFSGP-CKPGLVFQLD 145

Query: 174 GTIIAPTDFKVWGK--GLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHV--SPFHDPIDDE 233
           G ++ P   + W +     QWL F +L G T  G G ++G G  WW +   P   P    
Sbjct: 146 GVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWDLPCKPHRGPDGSS 205

Query: 234 SKLFIPLNSTVQEKPPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKF 293
           S                          P   PT +RF+ S N+ V G++IQNSPQ H+KF
Sbjct: 206 S------------------------SGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKF 265

Query: 294 DNCIGVLVHNFSVSSPGDSLNTDGIHLQNSKDVLIHSTTLSCG 330
           D C GVL++   +SSP  S NTDGIHL N++ V I+++ +S G
Sbjct: 266 DGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNG 281

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BLAST of Cp4.1LG09g05280 vs. ExPASy Swiss-Prot
Match: Q94AJ5 (Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g80170 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 5.6e-35
Identity = 86/226 (38.05%), Postives = 117/226 (51.77%), Query Frame = 0


Query: 106 MFNVLNFGARGDGVTDDTKAFQDTWKASCKVAAST-FIVPSNYVFLLSPISFSGPYCQPD 165
           + +V NFGA+G+GVTDDTKAF D WK +C     T  +VP NY  LL PI  SGP C+  
Sbjct: 52  LLHVGNFGAKGNGVTDDTKAFADAWKTACSSKVKTRILVPENYTCLLRPIDLSGP-CKAR 111

Query: 166 IIFQLDGTIIAPTDFKVW-GKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPI 225
           +  Q+ GTIIAP D  VW G    +WL F  L  LT++G G ++G G  WW  S  H+  
Sbjct: 112 LTLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWERSCKHNHS 171

Query: 226 DDESKLFIPLNSTVQEKPPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCH 285
           +                   P R           PTAL F+   N+ V  + + +S Q H
Sbjct: 172 N-------------------PCRG---------APTALTFHKCKNMRVENLNVIDSQQMH 231

Query: 286 LKFDNCIGVLVHNFSVSSPGDSLNTDGIHLQNSKDVLIHSTTLSCG 330
           +   +C  V +    V +P  S NTDGIH+  S+ ++I +TT+S G
Sbjct: 232 IALTSCRRVTISGLKVIAPATSPNTDGIHISVSRGIVIDNTTVSTG 248

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BLAST of Cp4.1LG09g05280 vs. ExPASy Swiss-Prot
Match: P43212 (Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.4e-33
Identity = 82/231 (35.50%), Postives = 122/231 (52.81%), Query Frame = 0


Query: 105 SMFNVLNFGARGDGVTDDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPD 164
           ++FNV  +GA GDG  D T+AF   W+A+CK  ++  +VP N  F+++ + F+GP CQP 
Sbjct: 57  NIFNVEKYGAVGDGKHDCTEAFSTAWQAACKKPSAMLLVPGNKKFVVNNLFFNGP-CQPH 116

Query: 165 IIFQLDGTIIAPTDFKVWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPID 224
             F++DG I A  +   W    + WLQF KL G T+ G GVIDG+G  WW          
Sbjct: 117 FTFKVDGIIAAYQNPASWKNNRI-WLQFAKLTGFTLMGKGVIDGQGKQWW---------- 176

Query: 225 DESKLFIPLNSTVQEKPPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHL 284
                       V  +    +R          +PTA++F  S  + + G+K+ NSP+ HL
Sbjct: 177 ------AGQCKWVNGREICNDRD---------RPTAIKFDFSTGLIIQGLKLMNSPEFHL 236

Query: 285 KFDNCIGVLVHNFSVSSPGDSLNTDGIHLQNSKDVLIHSTTLSCGMNYFAL 336
            F NC GV +   S+++P DS NTDGI +  SK+  +   T+  G +  A+
Sbjct: 237 VFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAI 260

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BLAST of Cp4.1LG09g05280 vs. ExPASy Swiss-Prot
Match: P35336 (Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.1e-33
Identity = 81/226 (35.84%), Postives = 117/226 (51.77%), Query Frame = 0


Query: 104 SSMFNVLNFGARGDGVTDDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQP 163
           S   NV +FGA+GDG  DDTKAF+  WKA+C   +S  ++     +L+ PISFSGP C+ 
Sbjct: 87  SKTVNVDDFGAKGDG-RDDTKAFEKAWKAACSSTSSAVLLVPKKNYLVRPISFSGP-CKS 146

Query: 164 DIIFQLDGTIIAPTDFKVWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPI 223
            +  Q+ GTI A  D   + K    WL F  +  L ++G G I+G G +WW  S      
Sbjct: 147 GLTMQIYGTIEASDDRSDYRKDGRHWLVFDSVQNLRVEGGGTINGNGKIWWQNS------ 206

Query: 224 DDESKLFIPLNSTVQEKPPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCH 283
             ++   +P                         PTAL FY S +V V  +KI+N+ Q H
Sbjct: 207 -CKTNKALPCKDA---------------------PTALTFYKSKHVIVKNLKIENAQQIH 266

Query: 284 LKFDNCIGVLVHNFSVSSPGDSLNTDGIHLQNSKDVLIHSTTLSCG 330
           + FDNC+ V   N  V++P +S NTDGIH+  ++++ I S  +  G
Sbjct: 267 VSFDNCVNVQASNLMVTAPENSPNTDGIHVTGTQNIHISSCVIGTG 282

[Close]

BLAST of Cp4.1LG09g05280 vs. ExPASy Swiss-Prot
Match: Q7M1E7 (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.5e-32
Identity = 83/232 (35.78%), Postives = 122/232 (52.59%), Query Frame = 0


Query: 104 SSMFNVLNFGARGDGVTDDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQP 163
           +++FNV  +GA GDG  D T+AF  TW A+CK A++  +VP+N  F ++ + F GP CQP
Sbjct: 56  ATVFNVEQYGAVGDGKHDSTEAFATTWNAACKKASAVLLVPANKKFFVNNLVFRGP-CQP 115

Query: 164 DIIFQLDGTIIAPTDFKVWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPI 223
            + F++DGTI+A  D   W K    WLQF +L    + G GVIDG+G  WW         
Sbjct: 116 HLSFKVDGTIVAQPDPARW-KNSKIWLQFAQLTDFNLMGTGVIDGQGQQWW--------- 175

Query: 224 DDESKLFIPLNSTVQEKPPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCH 283
             + K+       V  +    +R+         +PTA++   S +VTV  + + NSP+ H
Sbjct: 176 AGQCKV-------VNGRTVCNDRN---------RPTAIKIDYSKSVTVKELTLMNSPEFH 235

Query: 284 LKFDNCIGVLVHNFSVSSPGDSLNTDGIHLQNSKDVLIHSTTLSCGMNYFAL 336
           L F  C GV +    + +P DS NTDGI +  SK   I    +  G +  A+
Sbjct: 236 LVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAI 260

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BLAST of Cp4.1LG09g05280 vs. NCBI nr
Match: KAG7012808.1 (Polygalacturonase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 707 bits (1825), Expect = 3.51e-257
Identity = 341/347 (98.27%), Postives = 343/347 (98.85%), Query Frame = 0


Query: 1   MYMKMKGLSFRGLTFMFMVAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH 60
           MYMKMKGLSFRGLTFMF+VAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH
Sbjct: 1   MYMKMKGLSFRGLTFMFVVAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH 60

Query: 61  GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVT 120
           GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVT
Sbjct: 61  GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVT 120

Query: 121 DDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK 180
           DDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK
Sbjct: 121 DDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK 180

Query: 181 VWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQEK 240
           VWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQEK
Sbjct: 181 VWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQEK 240

Query: 241 PPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVLVHNFSVS 300
            PFPERS+LVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGV VHNFSVS
Sbjct: 241 SPFPERSKLVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVFVHNFSVS 300

Query: 301 SPGDSLNTDGIHLQNSKDVLIHSTTLSCGMNYFALNHYSCHTYCHYD 347
           SPGDSLNTDGIHLQNSKDVLIHSTTLSCG NYFALNHYSCHT CHYD
Sbjct: 301 SPGDSLNTDGIHLQNSKDVLIHSTTLSCGTNYFALNHYSCHTSCHYD 347

[Close]

BLAST of Cp4.1LG09g05280 vs. NCBI nr
Match: XP_023542428.1 (polygalacturonase At1g48100-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 679 bits (1751), Expect = 4.27e-243
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0


Query: 1   MYMKMKGLSFRGLTFMFMVAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH 60
           MYMKMKGLSFRGLTFMFMVAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH
Sbjct: 1   MYMKMKGLSFRGLTFMFMVAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH 60

Query: 61  GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVT 120
           GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVT
Sbjct: 61  GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVT 120

Query: 121 DDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK 180
           DDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK
Sbjct: 121 DDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK 180

Query: 181 VWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQEK 240
           VWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQEK
Sbjct: 181 VWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQEK 240

Query: 241 PPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVLVHNFSVS 300
           PPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVLVHNFSVS
Sbjct: 241 PPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVLVHNFSVS 300

Query: 301 SPGDSLNTDGIHLQNSKDVLIHSTTLSCG 329
           SPGDSLNTDGIHLQNSKDVLIHSTTLSCG
Sbjct: 301 SPGDSLNTDGIHLQNSKDVLIHSTTLSCG 329

[Close]

BLAST of Cp4.1LG09g05280 vs. NCBI nr
Match: XP_022944796.1 (polygalacturonase At1g48100-like [Cucurbita moschata])

HSP 1 Score: 670 bits (1729), Expect = 9.53e-240
Identity = 324/329 (98.48%), Postives = 326/329 (99.09%), Query Frame = 0


Query: 1   MYMKMKGLSFRGLTFMFMVAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH 60
           MYMKMKGLSFRGLTFMF+VAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH
Sbjct: 1   MYMKMKGLSFRGLTFMFVVAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH 60

Query: 61  GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVT 120
           GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVT
Sbjct: 61  GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVT 120

Query: 121 DDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK 180
           DDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK
Sbjct: 121 DDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK 180

Query: 181 VWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQEK 240
           VWGKGLLQWLQFTKL+GLTIQGHGVIDGRGSVWWHVSPFHDPIDDE KLFIPLNSTVQEK
Sbjct: 181 VWGKGLLQWLQFTKLVGLTIQGHGVIDGRGSVWWHVSPFHDPIDDEPKLFIPLNSTVQEK 240

Query: 241 PPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVLVHNFSVS 300
            PFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGV VHNFSVS
Sbjct: 241 SPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVFVHNFSVS 300

Query: 301 SPGDSLNTDGIHLQNSKDVLIHSTTLSCG 329
           SPGDSLNTDGIHLQNSKDVLIHSTTLSCG
Sbjct: 301 SPGDSLNTDGIHLQNSKDVLIHSTTLSCG 329

[Close]

BLAST of Cp4.1LG09g05280 vs. NCBI nr
Match: XP_022966896.1 (polygalacturonase At1g48100-like [Cucurbita maxima])

HSP 1 Score: 667 bits (1721), Expect = 1.57e-238
Identity = 323/329 (98.18%), Postives = 325/329 (98.78%), Query Frame = 0


Query: 1   MYMKMKGLSFRGLTFMFMVAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH 60
           MYMKMKGLSFRGLTFMF+VAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH
Sbjct: 1   MYMKMKGLSFRGLTFMFVVAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH 60

Query: 61  GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVT 120
           GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSS FNVLNFGARGDGVT
Sbjct: 61  GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSRFNVLNFGARGDGVT 120

Query: 121 DDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK 180
           DDTKAFQDTWKASCK  ASTF+VPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK
Sbjct: 121 DDTKAFQDTWKASCKGVASTFVVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK 180

Query: 181 VWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQEK 240
           VWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQEK
Sbjct: 181 VWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQEK 240

Query: 241 PPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVLVHNFSVS 300
            PFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVLVHNFSVS
Sbjct: 241 SPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVLVHNFSVS 300

Query: 301 SPGDSLNTDGIHLQNSKDVLIHSTTLSCG 329
           SPGDSLNTDGIHLQNSKDVLIHSTTLSCG
Sbjct: 301 SPGDSLNTDGIHLQNSKDVLIHSTTLSCG 329

[Close]

BLAST of Cp4.1LG09g05280 vs. NCBI nr
Match: KAG6573735.1 (Polygalacturonase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 556 bits (1434), Expect = 2.10e-196
Identity = 279/314 (88.85%), Postives = 280/314 (89.17%), Query Frame = 0


Query: 16  MFMVAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSHGGGHNGNRRGGASKT 75
           MF+VAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSHGGGHNGNRRGGASKT
Sbjct: 1   MFVVAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSHGGGHNGNRRGGASKT 60

Query: 76  KPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVTDDTKAFQDTWKASCK 135
           KPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVTDDTKAFQDTWKASCK
Sbjct: 61  KPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVTDDTKAFQDTWKASCK 120

Query: 136 VAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFKVWGKGLLQWLQFTKL 195
           VAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFKVWGKGLLQWLQFTKL
Sbjct: 121 VAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFKVWGKGLLQWLQFTKL 180

Query: 196 IGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQEKPPFPERSELVGKVPS 255
           IGLTIQGHGVIDGRGS                                 ERSELVGKVPS
Sbjct: 181 IGLTIQGHGVIDGRGS---------------------------------ERSELVGKVPS 240

Query: 256 IKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVLVHNFSVSSPGDSLNTDGIHLQN 315
           IKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGV VHNFSVSSPGDSLNTDGIHLQN
Sbjct: 241 IKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVFVHNFSVSSPGDSLNTDGIHLQN 281

Query: 316 SKDVLIHSTTLSCG 329
           SKDVLIHSTTLSCG
Sbjct: 301 SKDVLIHSTTLSCG 281

[Close]

BLAST of Cp4.1LG09g05280 vs. ExPASy TrEMBL
Match: A0A6J1FZ29 (polygalacturonase At1g48100-like OS=Cucurbita moschata OX=3662 GN=LOC111449224 PE=3 SV=1)

HSP 1 Score: 670 bits (1729), Expect = 4.61e-240
Identity = 324/329 (98.48%), Postives = 326/329 (99.09%), Query Frame = 0


Query: 1   MYMKMKGLSFRGLTFMFMVAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH 60
           MYMKMKGLSFRGLTFMF+VAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH
Sbjct: 1   MYMKMKGLSFRGLTFMFVVAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH 60

Query: 61  GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVT 120
           GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVT
Sbjct: 61  GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVT 120

Query: 121 DDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK 180
           DDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK
Sbjct: 121 DDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK 180

Query: 181 VWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQEK 240
           VWGKGLLQWLQFTKL+GLTIQGHGVIDGRGSVWWHVSPFHDPIDDE KLFIPLNSTVQEK
Sbjct: 181 VWGKGLLQWLQFTKLVGLTIQGHGVIDGRGSVWWHVSPFHDPIDDEPKLFIPLNSTVQEK 240

Query: 241 PPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVLVHNFSVS 300
            PFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGV VHNFSVS
Sbjct: 241 SPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVFVHNFSVS 300

Query: 301 SPGDSLNTDGIHLQNSKDVLIHSTTLSCG 329
           SPGDSLNTDGIHLQNSKDVLIHSTTLSCG
Sbjct: 301 SPGDSLNTDGIHLQNSKDVLIHSTTLSCG 329

[Close]

BLAST of Cp4.1LG09g05280 vs. ExPASy TrEMBL
Match: A0A6J1HQK5 (polygalacturonase At1g48100-like OS=Cucurbita maxima OX=3661 GN=LOC111466463 PE=3 SV=1)

HSP 1 Score: 667 bits (1721), Expect = 7.61e-239
Identity = 323/329 (98.18%), Postives = 325/329 (98.78%), Query Frame = 0


Query: 1   MYMKMKGLSFRGLTFMFMVAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH 60
           MYMKMKGLSFRGLTFMF+VAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH
Sbjct: 1   MYMKMKGLSFRGLTFMFVVAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKAHSH 60

Query: 61  GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVT 120
           GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSS FNVLNFGARGDGVT
Sbjct: 61  GGGHNGNRRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSRFNVLNFGARGDGVT 120

Query: 121 DDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK 180
           DDTKAFQDTWKASCK  ASTF+VPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK
Sbjct: 121 DDTKAFQDTWKASCKGVASTFVVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFK 180

Query: 181 VWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQEK 240
           VWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQEK
Sbjct: 181 VWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQEK 240

Query: 241 PPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVLVHNFSVS 300
            PFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVLVHNFSVS
Sbjct: 241 SPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVLVHNFSVS 300

Query: 301 SPGDSLNTDGIHLQNSKDVLIHSTTLSCG 329
           SPGDSLNTDGIHLQNSKDVLIHSTTLSCG
Sbjct: 301 SPGDSLNTDGIHLQNSKDVLIHSTTLSCG 329

[Close]

BLAST of Cp4.1LG09g05280 vs. ExPASy TrEMBL
Match: A0A6J1DCG2 (polygalacturonase At1g48100-like OS=Momordica charantia OX=3673 GN=LOC111019072 PE=3 SV=1)

HSP 1 Score: 550 bits (1417), Expect = 1.37e-192
Identity = 273/331 (82.48%), Postives = 290/331 (87.61%), Query Frame = 0


Query: 5   MKGLSFRGLTFMFMVAFLVWSSSLGGCHGRATGKHWSKNRVASATHSSKKGKA-HSHGGG 64
           MKGLSFRGLTFMF+VAFLVWSSSL  CHGRAT K+W +NR ASA   SKK K  H HGG 
Sbjct: 1   MKGLSFRGLTFMFLVAFLVWSSSLEACHGRATWKNWRQNRAASAALYSKKWKTTHRHGGS 60

Query: 65  HNGNRRGGASKTKPPS-----TKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDG 124
           HNGN RGGASK KPPS     TK K DVP SLPP   GGGF G HSS FNVL+FGA+G+G
Sbjct: 61  HNGNHRGGASKIKPPSLLPPATKQKPDVPRSLPPPHKGGGFNGDHSSTFNVLHFGAKGNG 120

Query: 125 VTDDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTD 184
            TDDT+AFQDTW A+CKVAASTFIVPSNYVFL+ PISFSGPYCQPDI+FQLDGTIIAPTD
Sbjct: 121 ETDDTQAFQDTWTAACKVAASTFIVPSNYVFLVGPISFSGPYCQPDIVFQLDGTIIAPTD 180

Query: 185 FKVWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQ 244
           FKVWGKGLLQWLQFTKL+G+TIQG+GVIDGRGSVWW  SPF DPIDDE KLFIPLNSTVQ
Sbjct: 181 FKVWGKGLLQWLQFTKLVGITIQGNGVIDGRGSVWWQASPFDDPIDDEVKLFIPLNSTVQ 240

Query: 245 EKPPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVLVHNFS 304
            KPP P RSELVGK+PSIKPTALRFYGSFNVTVTGI IQNSPQCHLKFDNCIGVLVH+F 
Sbjct: 241 AKPPSPVRSELVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVLVHDFR 300

Query: 305 VSSPGDSLNTDGIHLQNSKDVLIHSTTLSCG 329
           VSSPGDSLNTDGIHLQNS+DVLIHST+LSCG
Sbjct: 301 VSSPGDSLNTDGIHLQNSRDVLIHSTSLSCG 331

[Close]

BLAST of Cp4.1LG09g05280 vs. ExPASy TrEMBL
Match: A0A1S3BFB4 (polygalacturonase At1g48100-like OS=Cucumis melo OX=3656 GN=LOC103489001 PE=3 SV=1)

HSP 1 Score: 540 bits (1392), Expect = 1.05e-188
Identity = 273/343 (79.59%), Postives = 291/343 (84.84%), Query Frame = 0


Query: 1   MYMKMKGLSFRGLTFMFMVAFLVWSSSLGGCHGRATGKH-WSKNRVASATHSSKKGKAHS 60
           MYMKM+G+SFRGLTFMF VAFLVWSSSL GCHGR   KH W +NRVAS    SKKGKAHS
Sbjct: 1   MYMKMEGISFRGLTFMFAVAFLVWSSSLEGCHGRVRSKHYWRQNRVASPALYSKKGKAHS 60

Query: 61  HGGGHNGNRRGGASKTKP------------PSTKPKQDVPPSLPPQKGGGGFKGGHSSMF 120
           HGG H GN  G ASKTKP            P TKPK ++P S PPQKGG      HS MF
Sbjct: 61  HGGSHKGNHHGSASKTKPRPSHKTPQPLPRPVTKPKPNIPRSPPPQKGG------HSFMF 120

Query: 121 NVLNFGARGDGVTDDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIF 180
           NVL+FGA+GDG TDDTKAFQDTW ASCKVAASTFIVPS YVFL+ PISFSGPYCQPDI+F
Sbjct: 121 NVLDFGAKGDGKTDDTKAFQDTWTASCKVAASTFIVPSKYVFLVGPISFSGPYCQPDIVF 180

Query: 181 QLDGTIIAPTDFKVWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWH-VSPFHDPIDDE 240
           QLDGTIIAPTDFKVWGKGLLQWLQFTKL+GLTIQG+GVIDGRGSVWW  +SP+ DPIDDE
Sbjct: 181 QLDGTIIAPTDFKVWGKGLLQWLQFTKLMGLTIQGNGVIDGRGSVWWQEISPYDDPIDDE 240

Query: 241 SKLFIPLNSTVQEKPPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKF 300
            KL IPLNSTVQEKPP P RSELVGK+P IKPTALRFYGSFNVTVTGI IQNSPQCHLKF
Sbjct: 241 FKLLIPLNSTVQEKPPAPARSELVGKMPRIKPTALRFYGSFNVTVTGITIQNSPQCHLKF 300

Query: 301 DNCIGVLVHNFSVSSPGDSLNTDGIHLQNSKDVLIHSTTLSCG 329
           DNCIGVLVH+F+VSSPGDSLNTDGIHLQNSKDVLI+S+TLSCG
Sbjct: 301 DNCIGVLVHDFNVSSPGDSLNTDGIHLQNSKDVLIYSSTLSCG 337

[Close]

BLAST of Cp4.1LG09g05280 vs. ExPASy TrEMBL
Match: A0A5D3CUP5 (Polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001100 PE=3 SV=1)

HSP 1 Score: 540 bits (1392), Expect = 1.05e-188
Identity = 273/343 (79.59%), Postives = 291/343 (84.84%), Query Frame = 0


Query: 1   MYMKMKGLSFRGLTFMFMVAFLVWSSSLGGCHGRATGKH-WSKNRVASATHSSKKGKAHS 60
           MYMKM+G+SFRGLTFMF VAFLVWSSSL GCHGR   KH W +NRVAS    SKKGKAHS
Sbjct: 1   MYMKMEGISFRGLTFMFAVAFLVWSSSLEGCHGRVRSKHYWRQNRVASPALYSKKGKAHS 60

Query: 61  HGGGHNGNRRGGASKTKP------------PSTKPKQDVPPSLPPQKGGGGFKGGHSSMF 120
           HGG H GN  G ASKTKP            P TKPK ++P S PPQKGG      HS MF
Sbjct: 61  HGGSHKGNHHGSASKTKPRPSHKTPQPLPRPVTKPKPNIPRSPPPQKGG------HSFMF 120

Query: 121 NVLNFGARGDGVTDDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIF 180
           NVL+FGA+GDG TDDTKAFQDTW ASCKVAASTFIVPS YVFL+ PISFSGPYCQPDI+F
Sbjct: 121 NVLDFGAKGDGKTDDTKAFQDTWTASCKVAASTFIVPSKYVFLVGPISFSGPYCQPDIVF 180

Query: 181 QLDGTIIAPTDFKVWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWH-VSPFHDPIDDE 240
           QLDGTIIAPTDFKVWGKGLLQWLQFTKL+GLTIQG+GVIDGRGSVWW  +SP+ DPIDDE
Sbjct: 181 QLDGTIIAPTDFKVWGKGLLQWLQFTKLMGLTIQGNGVIDGRGSVWWQEISPYDDPIDDE 240

Query: 241 SKLFIPLNSTVQEKPPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKF 300
            KL IPLNSTVQEKPP P RSELVGK+P IKPTALRFYGSFNVTVTGI IQNSPQCHLKF
Sbjct: 241 FKLLIPLNSTVQEKPPAPARSELVGKMPRIKPTALRFYGSFNVTVTGITIQNSPQCHLKF 300

Query: 301 DNCIGVLVHNFSVSSPGDSLNTDGIHLQNSKDVLIHSTTLSCG 329
           DNCIGVLVH+F+VSSPGDSLNTDGIHLQNSKDVLI+S+TLSCG
Sbjct: 301 DNCIGVLVHDFNVSSPGDSLNTDGIHLQNSKDVLIYSSTLSCG 337

[Close]

BLAST of Cp4.1LG09g05280 vs. TAIR 10
Match: AT1G10640.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 360.1 bits (923), Expect = 1.9e-99
Identity = 191/363 (52.62%), Postives = 244/363 (67.22%), Query Frame = 0


Query: 6   KGLSFRGLTFMFMVAFLVWSSSLGGCHGRATGKHWSKNRVASA----THSSKKGKAHSHG 65
           + LS R +T M ++A LVWS +L  C  R  G+HW  +  +S+    + S+KK K+H + 
Sbjct: 5   RSLSLRSITMMILMAVLVWSVTLETCIAR-RGRHWRHSHRSSSDLSDSLSNKKPKSHGNS 64

Query: 66  GGHNGNRRGGASKTKP---PSTK---------------PKQDVPPSLPPQKGGGGFKGGH 125
             H+ +      K+KP   P  K               P +  PP LPPQKG        
Sbjct: 65  HHHSSHNNNHHHKSKPKPKPKLKTPPKAHDNNSPVVSGPPKVQPPPLPPQKG-------- 124

Query: 126 SSMFNVLNFGARGDGVTDDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQP 185
           S +FNV++FGA+GDG  DDTKAF+  W A+CK+ AS  +VP  Y +L+ PISFSGPYCQ 
Sbjct: 125 SQVFNVMDFGAKGDGKCDDTKAFEAAWVAACKIEASVMLVPPEYTYLVGPISFSGPYCQA 184

Query: 186 DIIFQLDGTIIAPTDFKVWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHV-SPFHDP 245
           +I+FQLDGTIIAPTD K WGKGL+ W+ FTKL G+ +QG GVIDGRGS WW   SPF   
Sbjct: 185 NIVFQLDGTIIAPTDSKTWGKGLMWWIDFTKLKGIKVQGKGVIDGRGSGWWQQDSPF--- 244

Query: 246 IDDESKLFIPLNSTVQEKPPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQC 305
           ID ++KL +PLN++  + PP P RSEL  ++PSIKPTALRF GSF V VTGI IQNSPQC
Sbjct: 245 IDSDTKLIVPLNNSANQNPPMPIRSELDERMPSIKPTALRFSGSFGVEVTGITIQNSPQC 304

Query: 306 HLKFDNCIGVLVHNFSVSSPGDSLNTDGIHLQNSKDVLIHSTTLSCGMNYFALNHYSCHT 346
           HLKFD+C+GV+VH+ +VSSPGDS NTDGIHLQN+KDVLIHSTTL+CG +  ++     + 
Sbjct: 305 HLKFDDCVGVVVHDIAVSSPGDSPNTDGIHLQNTKDVLIHSTTLACGDDCISIQTGCSNV 355

[Close]

BLAST of Cp4.1LG09g05280 vs. TAIR 10
Match: AT1G60590.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 357.1 bits (915), Expect = 1.6e-98
Identity = 189/359 (52.65%), Postives = 250/359 (69.64%), Query Frame = 0


Query: 6   KGLSFRGLTFMFMVAFLVWSSSLGGCHGRATGKHWSKNRVASA----THSSKKGKAHSHG 65
           + L+ R +T M +V  LVWS++L  C  R  G+HW  +  +S+    + SSKK K+H + 
Sbjct: 5   ESLTLRSITMMTLVTILVWSATLETCIAR-RGRHWRHHHRSSSSLSDSLSSKKPKSHENN 64

Query: 66  GGH--NGNRRGGASKTKPP---------STKPKQDVPPS---LPPQKGGGGFKGGHSSMF 125
             H  + ++     KT+PP         S  P+   PP     PP           S  F
Sbjct: 65  HHHMSHKSKPKPKMKTQPPKSNDGSPVVSQPPQVQQPPPPHVQPPPTPLPLQPVEDSQQF 124

Query: 126 NVLNFGARGDGVTDDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIF 185
           NVL+FGA+GDG++DDT+AF+  W ++CKV AST I+P +Y+FL+ PISFSGPYCQ +I+F
Sbjct: 125 NVLDFGAKGDGMSDDTQAFEAAWASACKVEASTMIIPPDYIFLVGPISFSGPYCQANIVF 184

Query: 186 QLDGTIIAPTDFKVWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHD-PIDDE 245
           QL+G I+APTD + WG GL+ W++FTKL G+TIQG+GVIDGRG+VWW      D PIDD+
Sbjct: 185 QLEGMIVAPTDTESWGGGLMWWIEFTKLSGITIQGNGVIDGRGTVWWQQDYLSDYPIDDD 244

Query: 246 SKLFIPLNSTVQEKPPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKF 305
            KL +PLN++VQE+PP P RSEL  ++PSIKPTALRFYGS +VTVTGI IQNSPQCHLKF
Sbjct: 245 FKLIVPLNNSVQERPPMPIRSELNWRMPSIKPTALRFYGSIDVTVTGITIQNSPQCHLKF 304

Query: 306 DNCIGVLVHNFSVSSPGDSLNTDGIHLQNSKDVLIHSTTLSCGMNYFALNHYSCHTYCH 346
           DNC+ VLVH+ +VSSPGDS NTDGIHLQN++DV+IH+TTL+CG +  ++     + Y H
Sbjct: 305 DNCVKVLVHDVNVSSPGDSPNTDGIHLQNTRDVMIHTTTLACGDDCISIQTGCSNVYVH 362

[Close]

BLAST of Cp4.1LG09g05280 vs. TAIR 10
Match: AT5G14650.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 258.5 bits (659), Expect = 7.9e-69
Identity = 125/231 (54.11%), Postives = 157/231 (67.97%), Query Frame = 0


Query: 100 KGGHSSMFNVLNFGARGDGVTDDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGP 159
           +GG S   NVL+ GA+GDG +DDTKAF+D W+ +CKVAAST +VPS   FL+ P+SF G 
Sbjct: 44  EGGSSGTINVLDHGAKGDGTSDDTKAFEDAWQVACKVAASTLLVPSGSTFLVGPVSFLGK 103

Query: 160 YCQPDIIFQLDGTIIAPTDFKVWGKGLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPF 219
            C+  I+FQL+G IIAPT    WG GLLQW++F  L G+TI+G G+IDGRGSVWW     
Sbjct: 104 ECKEKIVFQLEGKIIAPTSASAWGSGLLQWIEFKALQGITIKGKGIIDGRGSVWW----- 163

Query: 220 HDPIDDESKLFIPLNSTVQEKPPFPERSELVG-KVPSIKPTALRFYGSFNVTVTGIKIQN 279
                                      ++++G K+P  KPTALRFYGS  VTV+GI IQN
Sbjct: 164 ---------------------------NDMMGTKMPRTKPTALRFYGSNGVTVSGITIQN 223

Query: 280 SPQCHLKFDNCIGVLVHNFSVSSPGDSLNTDGIHLQNSKDVLIHSTTLSCG 330
           SPQ HLKFDNCI + V +F+ SSPGDS NTDGIHLQNS+D +I+ +TL+CG
Sbjct: 224 SPQTHLKFDNCISIQVSDFTTSSPGDSPNTDGIHLQNSQDAVIYRSTLACG 242

[Close]

BLAST of Cp4.1LG09g05280 vs. TAIR 10
Match: AT3G26610.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 183.7 bits (465), Expect = 2.5e-46
Identity = 99/280 (35.36%), Postives = 152/280 (54.29%), Query Frame = 0


Query: 68  RRGGASKTKPPSTKPKQDVPPSLPPQKGGGGFKGGHSSMFNVLNFGARGDGVTDDTKAFQ 127
           R+    K KP   +  ++ P   P       +   +  +FN+ ++GA+GDGV+DD+KA  
Sbjct: 31  RKHHVKKIKPKHRRHSKNTPTGSP---APAPYPSTNEGVFNIFSYGAKGDGVSDDSKALV 90

Query: 128 DTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLDGTIIAPTDFKVW-GKGL 187
             WKA+CKV      +P+   FL+  ++  GP C+ + + Q++G ++AP     W    L
Sbjct: 91  GAWKAACKVVGGKVEIPAGTQFLVKAVTLQGP-CKEETVVQIEGILVAPEKIGSWPNSSL 150

Query: 188 LQWLQFTKLIGLTIQGHGVIDGRGSVWWHVSPFHDPIDDESKLFIPLNSTVQEKPPFPER 247
            QWL F  +  LTIQG G ++GRG  WW++  +     ++                    
Sbjct: 151 FQWLNFKWVSHLTIQGSGTLNGRGYNWWNLDTYQTQTRNK-------------------- 210

Query: 248 SELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKFDNCIGVLVHNFSVSSPGDSL 307
                 +P +KPTALRFY S NVTV  I I NSP CHLKFD+  GV V+N ++SSP +S 
Sbjct: 211 -----YIPPMKPTALRFYSSNNVTVRDISIVNSPLCHLKFDDSDGVKVNNITISSPENSP 270

Query: 308 NTDGIHLQNSKDVLIHSTTLSCGMNYFALNHYSCHTYCHY 347
           NTDGIHLQN+++V I  + ++CG +  ++   S + + H+
Sbjct: 271 NTDGIHLQNTRNVEIQHSNIACGDDCVSIQTGSSNVHIHH 281

[Close]

BLAST of Cp4.1LG09g05280 vs. TAIR 10
Match: AT1G48100.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 166.8 bits (421), Expect = 3.1e-41
Identity = 104/283 (36.75%), Postives = 140/283 (49.47%), Query Frame = 0


Query: 54  KGKAHSHGGGHNGNRRGGASKTKPPSTKPKQDVPPSLP---PQKGGGGFKGGHSSMFNVL 113
           + + H H G H            P  T    D  PS P   P    G    G   +F+V 
Sbjct: 26  RARYHYHKGRHGVTHPLPPPPPPPLETANPPDQVPSDPYPSPDPAPGDSDSG--CVFDVT 85

Query: 114 NFGARGDGVTDDTKAFQDTWKASCKVAASTFIVPSNYVFLLSPISFSGPYCQPDIIFQLD 173
           +FGA GDG  DDT AFQD WKA+C V +   + P   VF ++   FSGP C+P ++FQLD
Sbjct: 86  SFGAVGDGSCDDTAAFQDAWKAACAVESGVVLAPEGGVFKITSTIFSGP-CKPGLVFQLD 145

Query: 174 GTIIAPTDFKVWGK--GLLQWLQFTKLIGLTIQGHGVIDGRGSVWWHV--SPFHDPIDDE 233
           G ++ P   + W +     QWL F +L G T  G G ++G G  WW +   P   P    
Sbjct: 146 GVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWDLPCKPHRGPDGSS 205

Query: 234 SKLFIPLNSTVQEKPPFPERSELVGKVPSIKPTALRFYGSFNVTVTGIKIQNSPQCHLKF 293
           S                          P   PT +RF+ S N+ V G++IQNSPQ H+KF
Sbjct: 206 S------------------------SGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKF 265

Query: 294 DNCIGVLVHNFSVSSPGDSLNTDGIHLQNSKDVLIHSTTLSCG 330
           D C GVL++   +SSP  S NTDGIHL N++ V I+++ +S G
Sbjct: 266 DGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNG 281

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g05280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q949Z1	4.4e-40	36.75	Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV...	[more]
Q94AJ5	5.6e-35	38.05	Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g8017...	[more]
P43212	1.4e-33	35.50	Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1	[more]
P35336	3.1e-33	35.84	Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1	[more]
Q7M1E7	1.5e-32	35.78	Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1	[more]

BLAST of Cp4.1LG09g05280 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012808.1	3.51e-257	98.27	Polygalacturonase, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023542428.1	4.27e-243	100.00	polygalacturonase At1g48100-like [Cucurbita pepo subsp. pepo]	[more]
XP_022944796.1	9.53e-240	98.48	polygalacturonase At1g48100-like [Cucurbita moschata]	[more]
XP_022966896.1	1.57e-238	98.18	polygalacturonase At1g48100-like [Cucurbita maxima]	[more]
KAG6573735.1	2.10e-196	88.85	Polygalacturonase, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG09g05280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZ29	4.61e-240	98.48	polygalacturonase At1g48100-like OS=Cucurbita moschata OX=3662 GN=LOC111449224 P...	[more]
A0A6J1HQK5	7.61e-239	98.18	polygalacturonase At1g48100-like OS=Cucurbita maxima OX=3661 GN=LOC111466463 PE=...	[more]
A0A6J1DCG2	1.37e-192	82.48	polygalacturonase At1g48100-like OS=Momordica charantia OX=3673 GN=LOC111019072 ...	[more]
A0A1S3BFB4	1.05e-188	79.59	polygalacturonase At1g48100-like OS=Cucumis melo OX=3656 GN=LOC103489001 PE=3 SV...	[more]
A0A5D3CUP5	1.05e-188	79.59	Polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001...	[more]

BLAST of Cp4.1LG09g05280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10640.1	1.9e-99	52.62	Pectin lyase-like superfamily protein	[more]
AT1G60590.1	1.6e-98	52.65	Pectin lyase-like superfamily protein	[more]
AT5G14650.1	7.9e-69	54.11	Pectin lyase-like superfamily protein	[more]
AT3G26610.1	2.5e-46	35.36	Pectin lyase-like superfamily protein	[more]
AT1G48100.1	3.1e-41	36.75	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 256..339 e-value: 6.2E-14 score: 51.8 coord: 136..216 e-value: 3.6E-8 score: 32.8
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 100..344 e-value: 1.4E-54 score: 187.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..98
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 10..345
None	No IPR available	PANTHER	PTHR31375:SF192	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 10..345
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..31 score: 6.0
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 105..338

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g05280.1	Cp4.1LG09g05280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity