Cp4.1LG09g05230 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g05230
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Signal recognition particle receptor subunit beta
Location	Cp4.1LG09: 3401283 .. 3405506 (-)
RNA-Seq Expression	Cp4.1LG09g05230
Synteny	Cp4.1LG09g05230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAATAAAAGAAAGAAGAAAGGGAAAGAAGCACTACTGGACTTCTAGGGCTTGCCACGAGCTTGTTGGGTAATTTCATTCATCCCCAAATTTGATTCTCATCGCATTTCTGATTTGCAGCGGAATTATTGGATCAGGTATTATTTTCCTCGATTCTTCATTTCGTGATCTATGTTTCGCGGTTTCCTTCTAATGTCGCCGATTGATTTCGTCTGGACATAGGGTCGTACAGACCTTGGGGAACGAGGAAATTTTGACTGAAAACTTGTGGCTCAATTTGAGGACTTGAATTTCTGGAGTATATTGACAAAAAAGGTTGAAAAATGGACGGTATGGAGCTGTGGAAGGTTCAGGTGGATCAATTGAAGGTTCAGATGGAGCAATGGCTGGAACAAGGCTCGGAGATTGTTCGCCAAATTCCCCCGATTCAACTCTACGTTGGGGTTGGTGTGTTGTTATTGACGACTCTACTTCTCTTATTCAGTGAGTCTCCTCTTTATCATCGCTTTCTGTAATTGTATATCGCGAAGAAATTTGGAATTTGAAATTGATTCTCCTCCACTCTGCAGCTCGCTTGTTCAAGGGCAGAAAATCGAATACCATTGTACTTAGTGGGCTCAGTGGAAGCGGGAAAACTGTTCTTTTCTATCAAGTAAGCCTCTGCATTACTGGTTTGTTCATTCAAACACTAACCTGCCCTGTTAATTTATCGAGAATTTGACAACTGGAAATGATTGGCCTGAGATATTTGATTCATTAGTCTTTTGCTGTGAGATCCGACATCGGTTGGAGAGACCTTCCTTATAAGGATGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAACCGGGAGGCTGACGATAATATGTAACGAGTCAAAACGGACAATGTTTACTAGCGGTGGGTTTGAGTAGTTACAAATAGTATCAGAGCCAGACACCGAACGGTGTGCCAACGAGGACGCTGGCCCCGAAGGGGGTGGATTGTAAGATACCACATCGGTTGGTTGGAGAGGGGAACGAAACATTTCTTCTAAGGGTGTAGAAACCTCTCCTTAGTAGACGCGTTTTAAAACCGTGAGGCTGACGGCGATACGTAACGAGTCAAAACGGATAATATTTGCTAGCGGTGGGTTTGAGCTGTTACAAATGGTATTAGAGCCAGACACCGAACGGTATGCCAGTGAGGACACTGGGCCCCAAGGGGTGGATTGTGAGATACCACATCGGTCGTTTGGAGAGGGGAACGAAACATTTCTTATAAGGGTGTAGAAACCTCACCTTAGTAGACGCGTTTTAAAACCGTGAGGCTGACGGCGATACGTAACGAGTCAAAGCGGATAATATTTGCTAGTGGCGGATTTGGGCGGTTACAAATGTTATCAAAGGCAGACTCCCGACAGTGTGCCAGCAAGGACACTGAGCCCCAAGCGGGGTGGATTGTGAGATCCCACATTGGTCGGTTGGAGAGAAGAACGAAACATTTTTTAAAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACCGTGAGGCTGACGGCGATACGTAACGAGTCAAAGCGGATAATATTTGCTAGTGGTGGGTTTAGGCTGTTACATTTGCATACTTTGTTTACTTTTGTTCGAATTGAATGATTAAGCCTTTTACGATATGAGTTTCTGCACCATCTCTTCAAGAAGTAGCCTTAAATGCACTAATGTTATTTTGGAACTCTGTCCCCATTGCATATAAGAATGCCCCTTCTGTTCTCGACCTATTCTTCAAGGTCTGTTAAGAAGTTAGTAAAACAGTGTCCGTGCACGCTTTTGACTTTGTGTTATGGATCACGGTGTCTGATGTACTCGATATTTCAAAGTTTAATTTAATGATTGATTGGATGCTGACAATGTTGTTATGTATAATTAAAGACCAAGCATAAATCCTATTGGGTTTATGGTGATGCTTCATAGCTTCCTAGATGTTCTGCTATCCTTTATGATGTTTTTATGCCTTTGCAGCTTCGTGATGGTTCTTCTCATCAGGGTACTGTTACATCAATGGAACCCAATGAGGGCACTTTTGTGCTTCATTCTGAAATACCGAAGGTAATTTGTTTTCTAGAACGGATTTTCATGAAATTAGAATGCTCGACTTCTGATTCATTACGGCTTCGAAACTAATACGAACAACGCTGTGTGGTTTCTGTTTTCAGCAGCCTTAACATTTTTCTTACATTACTTGATCAGACATAAACTGACAGATATTTTTCTCTATGTTTGCCTTGGTAGAAGGACAAACTGAAGCCTGTTCATCTTATTGATGTCCCTGGACACTCTCGTCTTCGAGCCAAACTAGATGACTTCTTGCCTCAAGCAGCTGGTGTTGTCTTTGTGGTGGATGCTTTGGATTTTTTACCCAACTGTCGTGCAGCTTCAGAGTAAGGGATTAGTCCTCTCCGACTTTTTGTTTATACGTGCGCACATTTACTATATGAATGTAGAAGCTTCGAGTCTCACGAGTCCTGCATGGTTGTGTAACATGAGCTCGAGTATCCCGAGTTCTCACATTCCTCTCCCTGTAAAACATCCAATTTCATAATAGAAGGCATGCTCTTTGCAACATAAGCACTCACGTGTGCTGTACATATCTGATGCAATTCGTGCTCATGTACACGAACGAGCTCAGAAATAAATGTCTCATGTCATTAGTTAAATCTAATTCGATCTCTCTTGAAGGTACCTCTATGACATCCTGACTAATGCGAGTGTCGTGAAGAAGAAGATCCCTGTCCTGATACTATGCAATAAAACAGACAAGGTGACAGCCCACACAAAGGAGTTTATCAATAGGCAGATGGAAAAAGAGATGTAAGGCTTTCAACTCTCTCCATAATAGGAACATTCTTTTCATTATCTGTTAAGCAAATGATTGAAATCTCACATCGGTCGGAGACAGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTATCAGACGCGTTTTAAAACCTTAGGGGAAGCCCAAAACGGAAAGCCCAAAGAGGACATTTGCTAGTGGTGAGCTTGGGCTGTTACAAATGGTAACAGAGCCAGACACCGGGCAGTGTGCCAGCGAGGACGCTAGGCCCTCAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTAGGTAGGCGTGTTTTAAAACCTTAGGAGAAACCCAGAAGGGAAAAGCCCAAAGAGAAGGTAATATTTGCTAGCGGTGAGCTTAGGTTGTTACAAATAGTATCAGAGCCAGACACTGGGCGTGTGCCAGCGAGGACGCTAGGCCCTCAAGGGGGTGGATTGTGAGATGCCACATCGGTTGGGGAGGAGAGAGAAGCATTCCAAAACCTTGGGGGAAGCTCAAAAGGGAAAACCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCTTGGGCTGTTACCATCATTATCTGCCATACATTGATTATAATGTTATTTCAATTCCCGACCTTGTGTCTTCTACGATTGTACAGCGACAAATTACGAGTATCGAGAAGCGCGATCTCAGATGCTGATATGTCGAATGACTTCACACTCGGGGTACCTGGGAAAGCATTTTCGTTCACACAGTGCCATAACAAAGTTTCAGTCGCTGAAGCCTCTGGATTAACAGGTGAAGTATCTGAGGTGGAGCAATTTATAAGGGAAAACGTGAAGTCCTAGAGCCTGTATCTTCGACTCTACATGATGACTGGTACTCTTTTTCCCTTCCAATATAAACTACAATATTTGTGCTTGAGATTTCCGAATTGCATCCCATTTTTTTTGTAGTGCATAAGACTGAAGAAATTGTATGTCCATGCCTTCTTCCCTTGTTGATAAAACACCAGAAGTATAGCGGGAAACAGTCATACAATGTCATAGAAAGCCAAAAAGAAACGATGTTTGCTTAAATAATAGAATTTGAGATGTTGTTGCCTTGTGTTCTGGTATACTTGAAATCAATAGGTGTCAACCTTGCTTGCTATATTTGTAAATATGACGATTTTTTCCTTCAAAATTTCATGTGCGTATTCAAACGTTCTTTTTGTACCCGTGTCTATCGTTATTCGATTTTATAATCCCTAATAATAGTATATCATAAGAACGGTCTATCACCGATAGACTATTTTTATTTTACTGACCATCTCTCTGTGTATCGTTAAAAGA

mRNA sequence

TGAAAATAAAAGAAAGAAGAAAGGGAAAGAAGCACTACTGGACTTCTAGGGCTTGCCACGAGCTTGTTGGGTAATTTCATTCATCCCCAAATTTGATTCTCATCGCATTTCTGATTTGCAGCGGAATTATTGGATCAGACCTTGGGGAACGAGGAAATTTTGACTGAAAACTTGTGGCTCAATTTGAGGACTTGAATTTCTGGAGTATATTGACAAAAAAGGTTGAAAAATGGACGGTATGGAGCTGTGGAAGGTTCAGGTGGATCAATTGAAGGTTCAGATGGAGCAATGGCTGGAACAAGGCTCGGAGATTGTTCGCCAAATTCCCCCGATTCAACTCTACGTTGGGGTTGGTGTGTTGTTATTGACGACTCTACTTCTCTTATTCACTCGCTTGTTCAAGGGCAGAAAATCGAATACCATTGTACTTAGTGGGCTCAGTGGAAGCGGGAAAACTGTTCTTTTCTATCAACTTCGTGATGGTTCTTCTCATCAGGGTACTGTTACATCAATGGAACCCAATGAGGGCACTTTTGTGCTTCATTCTGAAATACCGAAGAAGGACAAACTGAAGCCTGTTCATCTTATTGATGTCCCTGGACACTCTCGTCTTCGAGCCAAACTAGATGACTTCTTGCCTCAAGCAGCTGGTGTTGTCTTTGTGGTGGATGCTTTGGATTTTTTACCCAACTGTCGTGCAGCTTCAGAGTACCTCTATGACATCCTGACTAATGCGAGTGTCGTGAAGAAGAAGATCCCTGTCCTGATACTATGCAATAAAACAGACAAGGTGACAGCCCACACAAAGGAGTTTATCAATAGGCAGATGGAAAAAGAGATCGACAAATTACGAGTATCGAGAAGCGCGATCTCAGATGCTGATATGTCGAATGACTTCACACTCGGGGTACCTGGGAAAGCATTTTCGTTCACACAGTGCCATAACAAAGTTTCAGTCGCTGAAGCCTCTGGATTAACAGGTGAAGTATCTGAGGTGGAGCAATTTATAAGGGAAAACGTGAAGTCCTAGAGCCTGTATCTTCGACTCTACATGATGACTGTGCATAAGACTGAAGAAATTGTATGTCCATGCCTTCTTCCCTTGTTGATAAAACACCAGAAGTATAGCGGGAAACAGTCATACAATGTCATAGAAAGCCAAAAAGAAACGATGTTTGCTTAAATAATAGAATTTGAGATGTTGTTGCCTTGTGTTCTGGTATACTTGAAATCAATAGGTGTCAACCTTGCTTGCTATATTTGTAAATATGACGATTTTTTCCTTCAAAATTTCATGTGCGTATTCAAACGTTCTTTTTGTACCCGTGTCTATCGTTATTCGATTTTATAATCCCTAATAATAGTATATCATAAGAACGGTCTATCACCGATAGACTATTTTTATTTTACTGACCATCTCTCTGTGTATCGTTAAAAGA

Coding sequence (CDS)

ATGGACGGTATGGAGCTGTGGAAGGTTCAGGTGGATCAATTGAAGGTTCAGATGGAGCAATGGCTGGAACAAGGCTCGGAGATTGTTCGCCAAATTCCCCCGATTCAACTCTACGTTGGGGTTGGTGTGTTGTTATTGACGACTCTACTTCTCTTATTCACTCGCTTGTTCAAGGGCAGAAAATCGAATACCATTGTACTTAGTGGGCTCAGTGGAAGCGGGAAAACTGTTCTTTTCTATCAACTTCGTGATGGTTCTTCTCATCAGGGTACTGTTACATCAATGGAACCCAATGAGGGCACTTTTGTGCTTCATTCTGAAATACCGAAGAAGGACAAACTGAAGCCTGTTCATCTTATTGATGTCCCTGGACACTCTCGTCTTCGAGCCAAACTAGATGACTTCTTGCCTCAAGCAGCTGGTGTTGTCTTTGTGGTGGATGCTTTGGATTTTTTACCCAACTGTCGTGCAGCTTCAGAGTACCTCTATGACATCCTGACTAATGCGAGTGTCGTGAAGAAGAAGATCCCTGTCCTGATACTATGCAATAAAACAGACAAGGTGACAGCCCACACAAAGGAGTTTATCAATAGGCAGATGGAAAAAGAGATCGACAAATTACGAGTATCGAGAAGCGCGATCTCAGATGCTGATATGTCGAATGACTTCACACTCGGGGTACCTGGGAAAGCATTTTCGTTCACACAGTGCCATAACAAAGTTTCAGTCGCTGAAGCCTCTGGATTAACAGGTGAAGTATCTGAGGTGGAGCAATTTATAAGGGAAAACGTGAAGTCCTAG

Protein sequence

MDGMELWKVQVDQLKVQMEQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGRKSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLIDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADMSNDFTLGVPGKAFSFTQCHNKVSVAEASGLTGEVSEVEQFIRENVKS

Homology

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BLAST of Cp4.1LG09g05230 vs. ExPASy Swiss-Prot
Match: Q54XX1 (Signal recognition particle receptor subunit beta OS=Dictyostelium discoideum OX=44689 GN=srprb PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.8e-25
Identity = 83/267 (31.09%), Postives = 128/267 (47.94%), Query Frame = 0


Query: 26  SEIVRQIPPIQLYVGVGVLLLTTLLLLF--------------TRLFKGRKSN-------- 85
           ++I   + P  L +   VLLL    L+F              TR   GR SN        
Sbjct: 27  NQIDTYLKPYNLPIKTDVLLLALFTLIFIIIISKLFGSSGNKTRSVGGRTSNDKKVKRGV 86

Query: 86  TIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLIDVP 145
            I + GLS +GKT L   L +      T TS+  N G ++  ++       K + +IDVP
Sbjct: 87  NIAILGLSNAGKTALLLNLTNVDKKISTHTSITTNNGVYITENK-------KKLPIIDVP 146

Query: 146 GHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCN 205
           G+ + +A L   L  +A +++V+D   F+ N    ++YLYDILTN SV +KKIPVL+  N
Sbjct: 147 GNGKAKASLPKILSNSACIIYVIDGTTFIDNSTQEAQYLYDILTNESVYQKKIPVLVFNN 206

Query: 206 KTDKVTAHTKEFINRQMEKEIDKLRVSRSA----ISDADMSNDFTLGVPGKAFSFTQCHN 262
           K D  +    E +   +E+E+D LR +R A    +   +   D  LG+ G  F F    N
Sbjct: 207 KMDLDSTIDTEQVKNILERELDDLRRTRGATPIVLGQEEDKKDIYLGIEGTPFQFDHLPN 266

[Close]

BLAST of Cp4.1LG09g05230 vs. ExPASy Swiss-Prot
Match: P47758 (Signal recognition particle receptor subunit beta OS=Mus musculus OX=10090 GN=Srprb PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.9e-23
Identity = 82/239 (34.31%), Postives = 127/239 (53.14%), Query Frame = 0


Query: 19  EQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGRKSN--TIVLSGLSGSGKT 78
           + +L+   + ++Q  P  L V V  LL   L L+F +    RKS+   ++  GL  SGKT
Sbjct: 18  QPYLDSLRQELQQRDPTLLSVAV-ALLAVLLTLVFWKFIWSRKSSQRAVLFVGLCDSGKT 77

Query: 79  VLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLIDVPGHSRLRAK-LDDF 138
           +LF +L  G  ++ T TS+  +   + +++     ++   + LID+PGH  LR + LD F
Sbjct: 78  LLFVRLLTG-QYRDTQTSITDSSAIYKVNN-----NRGNSLTLIDLPGHESLRFQLLDRF 137

Query: 139 LPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEF 198
              A  VVFVVD+  F    +  +E+LY +L ++  +K    +LI CNK D   A + + 
Sbjct: 138 KSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIAMAKSAKL 197

Query: 199 INRQMEKEIDKLRVSRSAIS---DADMSNDFTLGVPGKAFSFTQCHNKVSVAEASGLTG 252
           I +Q+EKE++ LRV+RSA     D+  +    LG  GK F F+Q   KV   E S   G
Sbjct: 198 IQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGG 249

[Close]

BLAST of Cp4.1LG09g05230 vs. ExPASy Swiss-Prot
Match: Q4FZX7 (Signal recognition particle receptor subunit beta OS=Rattus norvegicus OX=10116 GN=Srprb PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 6.4e-23
Identity = 81/239 (33.89%), Postives = 127/239 (53.14%), Query Frame = 0


Query: 19  EQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGRKSN--TIVLSGLSGSGKT 78
           + +L+   + ++Q  P  L V V VL +  L L+F +    RKS+   ++  GL  SGKT
Sbjct: 18  QPYLDSLRQELQQRDPTLLSVAVAVLAV-LLTLVFWKFIWSRKSSQRAVLFVGLCDSGKT 77

Query: 79  VLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLIDVPGHSRLRAK-LDDF 138
           +LF +L  G  ++ T TS+  +   + +++     ++   + LID+PGH  LR + LD F
Sbjct: 78  LLFVRLLTG-QYRDTQTSITDSSAIYKVNN-----NRGNSLTLIDLPGHESLRLQFLDRF 137

Query: 139 LPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEF 198
              A  VVFVVD+  F    +  +E+LY +L ++  +K     L+ CNK D   A + + 
Sbjct: 138 KSSARAVVFVVDSATFQREVKDVAEFLYQVLIDSMALKNTPAFLVACNKQDIAMAKSAKL 197

Query: 199 INRQMEKEIDKLRVSRSAIS---DADMSNDFTLGVPGKAFSFTQCHNKVSVAEASGLTG 252
           I +Q+EKE++ LRV+RSA     D+  +    LG  GK F F+Q   KV   E S   G
Sbjct: 198 IQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGG 249

[Close]

BLAST of Cp4.1LG09g05230 vs. ExPASy Swiss-Prot
Match: Q9Y5M8 (Signal recognition particle receptor subunit beta OS=Homo sapiens OX=9606 GN=SRPRB PE=1 SV=3)

HSP 1 Score: 107.1 bits (266), Expect = 3.2e-22
Identity = 81/239 (33.89%), Postives = 130/239 (54.39%), Query Frame = 0


Query: 19  EQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGRKSN--TIVLSGLSGSGKT 78
           + +L+   + ++Q  P  L V V VL +  L L+F +L + R+S+   ++L GL  SGKT
Sbjct: 20  QPYLDTLRQELQQTDPTLLSVVVAVLAV-LLTLVFWKLIRSRRSSQRAVLLVGLCDSGKT 79

Query: 79  VLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLIDVPGHSRLRAK-LDDF 138
           +LF +L  G  ++ T TS+  +   + +++     ++   + LID+PGH  LR + L+ F
Sbjct: 80  LLFVRLLTG-LYRDTQTSITDSCAVYRVNN-----NRGNSLTLIDLPGHESLRLQFLERF 139

Query: 139 LPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEF 198
              A  +VFVVD+  F    +  +E+LY +L ++  +K     LI CNK D   A + + 
Sbjct: 140 KSSARAIVFVVDSAAFQREVKDVAEFLYQVLIDSMGLKNTPSFLIACNKQDIAMAKSAKL 199

Query: 199 INRQMEKEIDKLRVSRSAIS---DADMSNDFTLGVPGKAFSFTQCHNKVSVAEASGLTG 252
           I +Q+EKE++ LRV+RSA     D+  +    LG  GK F F+Q   KV   E S   G
Sbjct: 200 IQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGG 251

[Close]

BLAST of Cp4.1LG09g05230 vs. ExPASy Swiss-Prot
Match: P36057 (Signal recognition particle receptor subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SRP102 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-09
Identity = 62/215 (28.84%), Postives = 91/215 (42.33%), Query Frame = 0


Query: 64  TIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLIDVP 123
           +I+++G   SGKT L   L    S + TV S EP        S          V L+D P
Sbjct: 40  SIIIAGPQNSGKTSLL-TLLTTDSVRPTVVSQEPLSAADYDGS---------GVTLVDFP 99

Query: 124 GHSRLRAKLDDFLPQAA----GVVFVVDALDFLPNCRAASEYLYDILT-NASVVKKKIPV 183
           GH +LR KL D+L   A    G++F+VD+          +E+L DIL+   S  +  I +
Sbjct: 100 GHVKLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDI 159

Query: 184 LILCNKTDKVTAHTKEFINRQMEKEIDKL---------RVSRSAISDADMSNDFTLGVPG 243
           LI CNK++  TA     I   +E EI K+          V R    +    N   +    
Sbjct: 160 LIACNKSELFTARPPSKIKDALESEIQKVIERRKKSLNEVERKINEEDYAENTLDVLQST 219

Query: 244 KAFSFTQCHNKVSVAEASGLTGEVSEVEQFIRENV 265
             F F      V   E S    ++S+  ++I E +
Sbjct: 220 DGFKFANLEASVVAFEGSINKRKISQWREWIDEKL 244

[Close]

BLAST of Cp4.1LG09g05230 vs. NCBI nr
Match: XP_023542491.1 (signal recognition particle receptor subunit beta-like [Cucurbita pepo subsp. pepo] >XP_023542492.1 signal recognition particle receptor subunit beta-like [Cucurbita pepo subsp. pepo] >XP_023542493.1 signal recognition particle receptor subunit beta-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 516 bits (1330), Expect = 1.87e-184
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MDGMELWKVQVDQLKVQMEQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR 60
           MDGMELWKVQVDQLKVQMEQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR
Sbjct: 1   MDGMELWKVQVDQLKVQMEQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR 60

Query: 61  KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLI 120
           KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLI
Sbjct: 61  KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLI 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADMSNDFTLGVPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADMSNDFTLGVPGKAFSFTQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADMSNDFTLGVPGKAFSFTQCHNK 240

Query: 241 VSVAEASGLTGEVSEVEQFIRENVKS 266
           VSVAEASGLTGEVSEVEQFIRENVKS
Sbjct: 241 VSVAEASGLTGEVSEVEQFIRENVKS 266

[Close]

BLAST of Cp4.1LG09g05230 vs. NCBI nr
Match: KAG6573731.1 (Signal recognition particle receptor subunit beta, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 514 bits (1324), Expect = 1.54e-183
Identity = 264/266 (99.25%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MDGMELWKVQVDQLKVQMEQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR 60
           MDGMELWKVQVDQLKVQMEQW+EQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR
Sbjct: 1   MDGMELWKVQVDQLKVQMEQWMEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR 60

Query: 61  KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLI 120
           KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLI
Sbjct: 61  KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLI 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADMSNDFTLGVPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDAD+SNDFTLGVPGKAFSFTQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADISNDFTLGVPGKAFSFTQCHNK 240

Query: 241 VSVAEASGLTGEVSEVEQFIRENVKS 266
           VSVAEASGLTGEVSEVEQFIRENVKS
Sbjct: 241 VSVAEASGLTGEVSEVEQFIRENVKS 266

[Close]

BLAST of Cp4.1LG09g05230 vs. NCBI nr
Match: XP_022944926.1 (signal recognition particle receptor subunit beta-like [Cucurbita moschata] >XP_022944927.1 signal recognition particle receptor subunit beta-like [Cucurbita moschata] >XP_022944928.1 signal recognition particle receptor subunit beta-like [Cucurbita moschata])

HSP 1 Score: 514 bits (1323), Expect = 2.19e-183
Identity = 263/266 (98.87%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MDGMELWKVQVDQLKVQMEQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR 60
           MDGMELWKVQVDQLKVQMEQW+EQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR
Sbjct: 1   MDGMELWKVQVDQLKVQMEQWMEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR 60

Query: 61  KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLI 120
           KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHL+
Sbjct: 61  KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADMSNDFTLGVPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDAD+SNDFTLGVPGKAFSFTQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADISNDFTLGVPGKAFSFTQCHNK 240

Query: 241 VSVAEASGLTGEVSEVEQFIRENVKS 266
           VSVAEASGLTGEVSEVEQFIRENVKS
Sbjct: 241 VSVAEASGLTGEVSEVEQFIRENVKS 266

[Close]

BLAST of Cp4.1LG09g05230 vs. NCBI nr
Match: XP_022966901.1 (signal recognition particle receptor subunit beta-like [Cucurbita maxima] >XP_022966902.1 signal recognition particle receptor subunit beta-like [Cucurbita maxima] >XP_022966903.1 signal recognition particle receptor subunit beta-like [Cucurbita maxima])

HSP 1 Score: 507 bits (1306), Expect = 8.54e-181
Identity = 259/266 (97.37%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 1   MDGMELWKVQVDQLKVQMEQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR 60
           MDGMELWKVQVDQLKVQMEQW+EQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR
Sbjct: 1   MDGMELWKVQVDQLKVQMEQWMEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR 60

Query: 61  KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLI 120
           KSNT+VLSGLSGSGKTVLFYQLRDGSSHQGT TSMEPNEGTFVLHSEIPKKDKLKPVHLI
Sbjct: 61  KSNTVVLSGLSGSGKTVLFYQLRDGSSHQGTATSMEPNEGTFVLHSEIPKKDKLKPVHLI 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALD LPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDLLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADMSNDFTLGVPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDAD+SNDF +GVPGKAFSFTQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADISNDFNIGVPGKAFSFTQCHNK 240

Query: 241 VSVAEASGLTGEVSEVEQFIRENVKS 266
           VSVAEASGLTGEVSEVEQFIRENVKS
Sbjct: 241 VSVAEASGLTGEVSEVEQFIRENVKS 266

[Close]

BLAST of Cp4.1LG09g05230 vs. NCBI nr
Match: XP_004135257.1 (signal recognition particle receptor subunit beta [Cucumis sativus] >KGN51789.1 hypothetical protein Csa_007800 [Cucumis sativus])

HSP 1 Score: 486 bits (1250), Expect = 2.93e-172
Identity = 248/265 (93.58%), Postives = 256/265 (96.60%), Query Frame = 0


Query: 1   MDGMELWKVQVDQLKVQMEQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR 60
           M+G E WKVQV+QLKVQMEQWLEQG E V QIPPIQLYVGVGVLL TTLLLLFTRLFK R
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60

Query: 61  KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLI 120
           KSNTIVLSGLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSEI KKDKLKPVHL+
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADMSNDFTLGVPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAIS AD++NDFTLG+PGKAFSFTQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGIPGKAFSFTQCHNK 240

Query: 241 VSVAEASGLTGEVSEVEQFIRENVK 265
           V+VAEASGLTGEVSEVEQFIRENVK
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVK 265

[Close]

BLAST of Cp4.1LG09g05230 vs. ExPASy TrEMBL
Match: A0A6J1FZD8 (Signal recognition particle receptor subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111449316 PE=3 SV=1)

HSP 1 Score: 514 bits (1323), Expect = 1.06e-183
Identity = 263/266 (98.87%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MDGMELWKVQVDQLKVQMEQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR 60
           MDGMELWKVQVDQLKVQMEQW+EQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR
Sbjct: 1   MDGMELWKVQVDQLKVQMEQWMEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR 60

Query: 61  KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLI 120
           KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHL+
Sbjct: 61  KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADMSNDFTLGVPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDAD+SNDFTLGVPGKAFSFTQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADISNDFTLGVPGKAFSFTQCHNK 240

Query: 241 VSVAEASGLTGEVSEVEQFIRENVKS 266
           VSVAEASGLTGEVSEVEQFIRENVKS
Sbjct: 241 VSVAEASGLTGEVSEVEQFIRENVKS 266

[Close]

BLAST of Cp4.1LG09g05230 vs. ExPASy TrEMBL
Match: A0A6J1HQK9 (Signal recognition particle receptor subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111466467 PE=3 SV=1)

HSP 1 Score: 507 bits (1306), Expect = 4.13e-181
Identity = 259/266 (97.37%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 1   MDGMELWKVQVDQLKVQMEQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR 60
           MDGMELWKVQVDQLKVQMEQW+EQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR
Sbjct: 1   MDGMELWKVQVDQLKVQMEQWMEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR 60

Query: 61  KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLI 120
           KSNT+VLSGLSGSGKTVLFYQLRDGSSHQGT TSMEPNEGTFVLHSEIPKKDKLKPVHLI
Sbjct: 61  KSNTVVLSGLSGSGKTVLFYQLRDGSSHQGTATSMEPNEGTFVLHSEIPKKDKLKPVHLI 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALD LPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDLLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADMSNDFTLGVPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDAD+SNDF +GVPGKAFSFTQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADISNDFNIGVPGKAFSFTQCHNK 240

Query: 241 VSVAEASGLTGEVSEVEQFIRENVKS 266
           VSVAEASGLTGEVSEVEQFIRENVKS
Sbjct: 241 VSVAEASGLTGEVSEVEQFIRENVKS 266

[Close]

BLAST of Cp4.1LG09g05230 vs. ExPASy TrEMBL
Match: A0A0A0KSA6 (Signal recognition particle receptor subunit beta OS=Cucumis sativus OX=3659 GN=Csa_5G600910 PE=3 SV=1)

HSP 1 Score: 486 bits (1250), Expect = 1.42e-172
Identity = 248/265 (93.58%), Postives = 256/265 (96.60%), Query Frame = 0


Query: 1   MDGMELWKVQVDQLKVQMEQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR 60
           M+G E WKVQV+QLKVQMEQWLEQG E V QIPPIQLYVGVGVLL TTLLLLFTRLFK R
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60

Query: 61  KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLI 120
           KSNTIVLSGLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSEI KKDKLKPVHL+
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADMSNDFTLGVPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAIS AD++NDFTLG+PGKAFSFTQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGIPGKAFSFTQCHNK 240

Query: 241 VSVAEASGLTGEVSEVEQFIRENVK 265
           V+VAEASGLTGEVSEVEQFIRENVK
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVK 265

[Close]

BLAST of Cp4.1LG09g05230 vs. ExPASy TrEMBL
Match: E5GBI2 (Signal recognition particle receptor subunit beta OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 481 bits (1238), Expect = 9.57e-171
Identity = 246/265 (92.83%), Postives = 255/265 (96.23%), Query Frame = 0


Query: 1   MDGMELWKVQVDQLKVQMEQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR 60
           M+G E WKVQV+QLKVQMEQWLE+G E V QIPPIQLYVGVGVLL TTLLLL TRLFK R
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLERGLEFVHQIPPIQLYVGVGVLLFTTLLLLLTRLFKRR 60

Query: 61  KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLI 120
           KSNTIVLSGLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSEI KKDKLKPVHL+
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADMSNDFTLGVPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAIS AD+SNDFTLG+PGKAFSFTQC+NK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISTADISNDFTLGIPGKAFSFTQCYNK 240

Query: 241 VSVAEASGLTGEVSEVEQFIRENVK 265
           V+VAEASGLTGEVSEVEQFIRENVK
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVK 265

[Close]

BLAST of Cp4.1LG09g05230 vs. ExPASy TrEMBL
Match: A0A1S3BEG3 (Signal recognition particle receptor subunit beta OS=Cucumis melo OX=3656 GN=LOC103488993 PE=3 SV=1)

HSP 1 Score: 481 bits (1238), Expect = 9.57e-171
Identity = 246/265 (92.83%), Postives = 255/265 (96.23%), Query Frame = 0


Query: 1   MDGMELWKVQVDQLKVQMEQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGR 60
           M+G E WKVQV+QLKVQMEQWLE+G E V QIPPIQLYVGVGVLL TTLLLL TRLFK R
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLERGLEFVHQIPPIQLYVGVGVLLFTTLLLLLTRLFKRR 60

Query: 61  KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLI 120
           KSNTIVLSGLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSEI KKDKLKPVHL+
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISDADMSNDFTLGVPGKAFSFTQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAIS AD+SNDFTLG+PGKAFSFTQC+NK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISTADISNDFTLGIPGKAFSFTQCYNK 240

Query: 241 VSVAEASGLTGEVSEVEQFIRENVK 265
           V+VAEASGLTGEVSEVEQFIRENVK
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVK 265

[Close]

BLAST of Cp4.1LG09g05230 vs. TAIR 10
Match: AT5G05670.2 (signal recognition particle binding )

HSP 1 Score: 378.6 bits (971), Expect = 4.0e-105
Identity = 188/256 (73.44%), Postives = 222/256 (86.72%), Query Frame = 0


Query: 11  VDQLKVQMEQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLL-LFTRLFKGRKSNTIVLSG 70
           ++ LK+  EQW  QG E +++IPP QLY  +GVLL TT+LL L  RL +  KSNT++LSG
Sbjct: 4   LEDLKILAEQWSHQGIEYLQKIPPNQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVLLSG 63

Query: 71  LSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLIDVPGHSRLR 130
           L+GSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE  KK K+KPVHL+DVPGHSRLR
Sbjct: 64  LTGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVDVPGHSRLR 123

Query: 131 AKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVT 190
            KL++FLPQAA +VFVVDAL+FLPNCRAASEYLY+ILTNA+VVKKKIPVL+ CNKTDK+T
Sbjct: 124 PKLEEFLPQAAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLLCCNKTDKLT 183

Query: 191 AHTKEFINRQMEKEIDKLRVSRSAISDADMSNDFTLGVPGKAFSFTQCHNKVSVAEASGL 250
           AHTKEFI +QMEKEI+KLR SRSA+S AD++NDFT+G+ G+ FSFT C NKV+VAEASGL
Sbjct: 184 AHTKEFIRKQMEKEIEKLRASRSAVSTADIANDFTIGIEGEVFSFTHCSNKVTVAEASGL 243

Query: 251 TGEVSEVEQFIRENVK 266
           TGE  ++E FIRE +K
Sbjct: 244 TGETIQIEDFIREYIK 259

[Close]

BLAST of Cp4.1LG09g05230 vs. TAIR 10
Match: AT5G05670.1 (signal recognition particle binding )

HSP 1 Score: 378.6 bits (971), Expect = 4.0e-105
Identity = 188/256 (73.44%), Postives = 222/256 (86.72%), Query Frame = 0


Query: 11  VDQLKVQMEQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLL-LFTRLFKGRKSNTIVLSG 70
           ++ LK+  EQW  QG E +++IPP QLY  +GVLL TT+LL L  RL +  KSNT++LSG
Sbjct: 4   LEDLKILAEQWSHQGIEYLQKIPPNQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVLLSG 63

Query: 71  LSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLIDVPGHSRLR 130
           L+GSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE  KK K+KPVHL+DVPGHSRLR
Sbjct: 64  LTGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVDVPGHSRLR 123

Query: 131 AKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVT 190
            KL++FLPQAA +VFVVDAL+FLPNCRAASEYLY+ILTNA+VVKKKIPVL+ CNKTDK+T
Sbjct: 124 PKLEEFLPQAAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLLCCNKTDKLT 183

Query: 191 AHTKEFINRQMEKEIDKLRVSRSAISDADMSNDFTLGVPGKAFSFTQCHNKVSVAEASGL 250
           AHTKEFI +QMEKEI+KLR SRSA+S AD++NDFT+G+ G+ FSFT C NKV+VAEASGL
Sbjct: 184 AHTKEFIRKQMEKEIEKLRASRSAVSTADIANDFTIGIEGEVFSFTHCSNKVTVAEASGL 243

Query: 251 TGEVSEVEQFIRENVK 266
           TGE  ++E FIRE +K
Sbjct: 244 TGETIQIEDFIREYIK 259

[Close]

BLAST of Cp4.1LG09g05230 vs. TAIR 10
Match: AT2G18770.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 378.3 bits (970), Expect = 5.3e-105
Identity = 191/256 (74.61%), Postives = 223/256 (87.11%), Query Frame = 0


Query: 11  VDQLKVQMEQWLEQGSEIVRQIPPIQLYVGVGVLLLTTLLLLFTRLFKGRKSNTIVLSGL 70
           ++ LK+  EQW +QG E V++IPP QLY  +GVLLL T+ LL  RLF+  KSNT++LSGL
Sbjct: 4   LEDLKIVAEQWSKQGLEFVQKIPPPQLYTAIGVLLLATIWLLSIRLFRRTKSNTVLLSGL 63

Query: 71  SGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE-IPKKDKLKPVHLIDVPGHSRLR 130
           SGSGKTVLFYQLRDGSSHQG VTSMEPNEGTFVLH+E   KK K+KPVHLIDVPGHSRL 
Sbjct: 64  SGSGKTVLFYQLRDGSSHQGAVTSMEPNEGTFVLHNENNTKKGKVKPVHLIDVPGHSRLI 123

Query: 131 AKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVT 190
           +KL+++LP+AA VVFVVDAL+FLPN RAASEYLYDILTNASV+K K PVL+ CNKTDKVT
Sbjct: 124 SKLEEYLPRAAAVVFVVDALEFLPNIRAASEYLYDILTNASVIKNKTPVLLCCNKTDKVT 183

Query: 191 AHTKEFINRQMEKEIDKLRVSRSAISDADMSNDFTLGVPGKAFSFTQCHNKVSVAEASGL 250
           AHTKEFI +QMEKEIDKLRVSRSAIS AD++NDFTLG+ G+ FSF+ CHNKV+VAEASGL
Sbjct: 184 AHTKEFIRKQMEKEIDKLRVSRSAISTADIANDFTLGIEGEVFSFSHCHNKVTVAEASGL 243

Query: 251 TGEVSEVEQFIRENVK 266
           TGE  +V++FIRE+VK
Sbjct: 244 TGETDQVQEFIREHVK 259

[Close]

BLAST of Cp4.1LG09g05230 vs. TAIR 10
Match: AT5G67560.1 (ADP-ribosylation factor-like A1D )

HSP 1 Score: 47.0 bits (110), Expect = 2.8e-05
Identity = 41/151 (27.15%), Postives = 69/151 (45.70%), Query Frame = 0


Query: 50  LLLFTRLFKGRKSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIP 109
           LL + R    ++   + L GL  +GKT L   +  G   +  + ++  N       S   
Sbjct: 7   LLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGS--- 66

Query: 110 KKDKLKPVHLIDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNA 169
                  + L D+ G  R R+  + +    + +V+VVDA D   N   +   L+D+L+  
Sbjct: 67  -----VTIKLWDLGGQPRFRSMWERYCRSVSAIVYVVDAAD-PDNLSVSKSELHDLLSKT 126

Query: 170 SVVKKKIPVLILCNKTDKVTAHTKEFINRQM 201
           S+    IP+L+L NK DK  A +KE +  +M
Sbjct: 127 SL--NGIPLLVLGNKIDKPGALSKEALTDEM 146

[Close]

BLAST of Cp4.1LG09g05230 vs. TAIR 10
Match: AT3G49870.1 (ADP-ribosylation factor-like A1C )

HSP 1 Score: 46.2 bits (108), Expect = 4.7e-05
Identity = 42/134 (31.34%), Postives = 63/134 (47.01%), Query Frame = 0


Query: 67  LSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIPKKDKLKPVHLIDVPGHS 126
           L GL  +GKT L   +  G    G    M P  G F +         +K   L D+ G  
Sbjct: 24  LIGLQNAGKTSLVNVVATG----GYSEDMIPTVG-FNMRKVTKGNVTIK---LWDLGGQP 83

Query: 127 RLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTD 186
           R R+  + +    + +V+VVDA D   N   +   L+D+L+  S+    IP+L+L NK D
Sbjct: 84  RFRSMWERYCRAVSAIVYVVDAAD-PDNLSVSKSELHDLLSKTSL--NGIPLLVLGNKID 143

Query: 187 KVTAHTKEFINRQM 201
           K  A +KE +  +M
Sbjct: 144 KPGALSKEALTDEM 146

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g05230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54XX1	1.8e-25	31.09	Signal recognition particle receptor subunit beta OS=Dictyostelium discoideum OX...	[more]
P47758	4.9e-23	34.31	Signal recognition particle receptor subunit beta OS=Mus musculus OX=10090 GN=Sr...	[more]
Q4FZX7	6.4e-23	33.89	Signal recognition particle receptor subunit beta OS=Rattus norvegicus OX=10116 ...	[more]
Q9Y5M8	3.2e-22	33.89	Signal recognition particle receptor subunit beta OS=Homo sapiens OX=9606 GN=SRP...	[more]
P36057	3.1e-09	28.84	Signal recognition particle receptor subunit beta OS=Saccharomyces cerevisiae (s...	[more]

BLAST of Cp4.1LG09g05230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542491.1	1.87e-184	100.00	signal recognition particle receptor subunit beta-like [Cucurbita pepo subsp. pe...	[more]
KAG6573731.1	1.54e-183	99.25	Signal recognition particle receptor subunit beta, partial [Cucurbita argyrosper...	[more]
XP_022944926.1	2.19e-183	98.87	signal recognition particle receptor subunit beta-like [Cucurbita moschata] >XP_...	[more]
XP_022966901.1	8.54e-181	97.37	signal recognition particle receptor subunit beta-like [Cucurbita maxima] >XP_02...	[more]
XP_004135257.1	2.93e-172	93.58	signal recognition particle receptor subunit beta [Cucumis sativus] >KGN51789.1 ...	[more]

BLAST of Cp4.1LG09g05230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZD8	1.06e-183	98.87	Signal recognition particle receptor subunit beta OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1HQK9	4.13e-181	97.37	Signal recognition particle receptor subunit beta OS=Cucurbita maxima OX=3661 GN...	[more]
A0A0A0KSA6	1.42e-172	93.58	Signal recognition particle receptor subunit beta OS=Cucumis sativus OX=3659 GN=...	[more]
E5GBI2	9.57e-171	92.83	Signal recognition particle receptor subunit beta OS=Cucumis melo subsp. melo OX...	[more]
A0A1S3BEG3	9.57e-171	92.83	Signal recognition particle receptor subunit beta OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of Cp4.1LG09g05230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05670.2	4.0e-105	73.44	signal recognition particle binding	[more]
AT5G05670.1	4.0e-105	73.44	signal recognition particle binding	[more]
AT2G18770.1	5.3e-105	74.61	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G67560.1	2.8e-05	27.15	ADP-ribosylation factor-like A1D	[more]
AT3G49870.1	4.7e-05	31.34	ADP-ribosylation factor-like A1C	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..24
None	No IPR available	PANTHER	PTHR11485	TRANSFERRIN	coord: 10..265
None	No IPR available	PROSITE	PS51417	ARF	coord: 56..266 score: 9.358929
IPR019009	Signal recognition particle receptor, beta subunit	PFAM	PF09439	SRPRB	coord: 61..241 e-value: 5.2E-37 score: 127.0
IPR019009	Signal recognition particle receptor, beta subunit	PANTHER	PTHR11485:SF50	P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN	coord: 10..265
IPR019009	Signal recognition particle receptor, beta subunit	CDD	cd04105	SR_beta	coord: 63..262 e-value: 2.49291E-69 score: 210.641
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 58..264 e-value: 1.5E-61 score: 209.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 65..259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g05230.1	Cp4.1LG09g05230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045047	protein targeting to ER
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005785	signal recognition particle receptor complex
molecular_function	GO:0005525	GTP binding