Cp4.1LG09g04310 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g04310
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ATP synthase subunit d, mitochondrial
Location	Cp4.1LG09: 2741472 .. 2744145 (-)
RNA-Seq Expression	Cp4.1LG09g04310
Synteny	Cp4.1LG09g04310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGCCGAGAGGCCCAAACCAAGAGCAGCAGCCCAAGATTCGGAACCAGTTCTCAGAGACTCAGACAAAGAGTAGAAGAATAGACGCTGATATCTGTGTTTTGAGCTCTCAACGAATTCCCCTCTTGCAGTTCCCATTGATTTTCTTTCCTCTGCGAAATCCGGCGGAAAAATGAGCGGTACCGTCAAGAAAGTGACCGATGTTGCCTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAGGCTCGCAAGGAGTTCTCATCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCATCTCTCCAGACCAAGTTCAGCCAGGTCCGGAAATTCTTGTTTTTTTTCTTTCGTTGTTTTCGTAGTCGCTGGATCTTTGTTTTTATCTGAATTGATTCTTGTTGAAGTGGATTTGATTTTTGTTTGGCTTGAATGTTTGAGATTGTGTTTTTCGGAATTTGTTTTTTGTTCTTATGTTTAATTTCCTTCATTTCTTGTGAATCCGGAGTTGTTTACTAACTACAATCGCAATATTTCGTTTATTATGGGTCGTAAATAGGGGAATGTTGATTTACTTGTGGTATTATCGAAGGAAGATCGTTCGGAGAAGAATGGAATTTAGAAAACAGAAATGTTTTTCGTTGTAAAGCCAACATTTTCAACTTGTTTGGATCTAGAAACTGTTAGATACATAAGATGACAGGAACATGATATATGATTCATTATTACAGCAATTCTAATGTCTCTGGTAAAATTGGCTGGGCTATGTCTATTTTATACGAAATGGCAAATCATATGTATTGGTATCTGGTCTGGAATACCCATTTCATACAGTTTGTGCAACTGGGAGTGTTGGAACATAGCTCATAGTAAGATGCTAATGCTTCTCCTATGATTTATAGGCTTAAATCACTCTTTTGTTCGTAATGAAATAGTTGTTTTTTCAGAAAAAGAAGTGCAATTGGAAGCCGAATCGATAGAATGATCGTGTTAATTTTGTGCTTTTCTTTTGTATCAGTCAACAAAATTTTCATATTAATGACTAAAGCGTGCTTTTAATTTTGTGGCCGTAGATAGAATGAAGTACTCTATTGGGCTGCCTTAATTACTCTGCTCAATACTTTCAAGATCTGCATTATTTTTAAACTGTTTATCTCCGTTCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGATCCCGCTTGGTGGACATGTACAAAGAGGCTTATGACAGTATGCTCTCTGATTCACTTGTCTTTTCAAGTTCATACTTCGATTTTTCTGTGCAATATTATGAGGCAATATTGTGATTTTTTCAGCACCTGGCTTACCTGTGATACTTCTCTAATTTGGATTCTCAATGATAACTTTTCTTGACTAAGTAGTCTTTCGGAACCACAATCGTACAATAAGTACATTGTATAATTTGAGATTTTTGGATGTAGACTTCTGGGGCGCATTGGCAAATCTGTCACTAAATTTTTTAAGTGGCCCTTTTGTCTCAGTGGATGTCACACTATCCTATTACTTGTTCATGTTCACCACCGATGATCGTGTTGGGGGAAATCCTGTGATTGAAGTATTTACAGCATTTTCTTTTATATTGGAACACATTTGGCCTTTTAGTTGGTGTAACTTAAATGTCTTCTGAAGTACTCGTTCTAATAGCCTGAAAATCTTGTCGTTGTAACGTTTGCGTGGTAAATAATAAGGCTGGCTATGAATTTAGCTTTCCCCTTTCACTCTCATGAGACCAGACTATGTCATCAAGATTCGGGGACAGATTAAGCATGGTTTTGGACTGTCATTAATGTACAAAGCAATGCCCTTATGATTGCTTGCTTTTTTTTTTTATCATTACGCCATCGGTTGACCTGCTTCCTTTTTAGGCATTGAGGTCCCCAAATTTGTAGACACAGTGACTCCGCAGTACAAACCTAAATTTGATGCGTTGGTAAGCACCACATATGTAGTTATATCTTAGTATATCTCTTTGTAGCTCCCCGCTAGGCGCTTGATTTATTGTTCATGTGGCAGCTGGTAGAATTGAAGGAAGCTGAAGTGAAATCCCTGAAGGAGTCTGAGCGGTTGGAGAAGGAGATTGTTGAAGTTCAAGAAATGAAGGTAATAGACAAGAATAGCTCACTTGATTTCCCATTTTTTAGGAATGATGAATCCTCACTGCTTGTTGTTCTCATCAGAAAAAGATCAGCACCATGACTGCTGACGAGTACTTCGAGAAGCATCCTGAGCTGAGGAAGAAATTCGACGATGAAATCCGAAACGACTACTGGGGCTATTGACCGCAAATTACTGGTTGAAGCGCCAAAGTTTCACAATTTAATTTCGTAAATCTTCCGGGTCTTGTTTTGCTGCAGCTGTTTGGTCAGTAATAAAACAAACAAGATAGTTCTCCTCCAATTTGGGTGCATTTGCTTTCCAAATCACGTTGACAAAATTGATTAGAAAGACTGAGATTTTCCTTGAGATGATGTTGTGAGAGTTCCAAATCACTCGTGGTACATTATCATAGCAAATGCATTTTTTTATAATGAGATTATTGTGTTATTTCAGCAAGTTTTCTTATCATTCCGATATTAATGAAGATCGGGGCTCCGTACCATGCCTCATTTCATAGAGAAC

mRNA sequence

TGGGCCGAGAGGCCCAAACCAAGAGCAGCAGCCCAAGATTCGGAACCAGTTCTCAGAGACTCAGACAAAGAGCTCTCAACGAATTCCCCTCTTGCAGTTCCCATTGATTTTCTTTCCTCTGCGAAATCCGGCGGAAAAATGAGCGGTACCGTCAAGAAAGTGACCGATGTTGCCTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAGGCTCGCAAGGAGTTCTCATCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCATCTCTCCAGACCAAGTTCAGCCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGATCCCGCTTGGTGGACATGTACAAAGAGGCTTATGACAGCATTGAGGTCCCCAAATTTGTAGACACAGTGACTCCGCAGTACAAACCTAAATTTGATGCGTTGCTGGTAGAATTGAAGGAAGCTGAAGTGAAATCCCTGAAGGAGTCTGAGCGGTTGGAGAAGGAGATTGTTGAAGTTCAAGAAATGAAGAAAAAGATCAGCACCATGACTGCTGACGAGTACTTCGAGAAGCATCCTGAGCTGAGGAAGAAATTCGACGATGAAATCCGAAACGACTACTGGGGCTATTGACCGCAAATTACTGGTTGAAGCGCCAAAGTTTCACAATTTAATTTCGTAAATCTTCCGGGTCTTGTTTTGCTGCAGCTGTTTGGTCAGTAATAAAACAAACAAGATAGTTCTCCTCCAATTTGGGTGCATTTGCTTTCCAAATCACGTTGACAAAATTGATTAGAAAGACTGAGATTTTCCTTGAGATGATGTTGTGAGAGTTCCAAATCACTCGTGGTACATTATCATAGCAAATGCATTTTTTTATAATGAGATTATTGTGTTATTTCAGCAAGTTTTCTTATCATTCCGATATTAATGAAGATCGGGGCTCCGTACCATGCCTCATTTCATAGAGAAC

Coding sequence (CDS)

ATGAGCGGTACCGTCAAGAAAGTGACCGATGTTGCCTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAGGCTCGCAAGGAGTTCTCATCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCATCTCTCCAGACCAAGTTCAGCCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGATCCCGCTTGGTGGACATGTACAAAGAGGCTTATGACAGCATTGAGGTCCCCAAATTTGTAGACACAGTGACTCCGCAGTACAAACCTAAATTTGATGCGTTGCTGGTAGAATTGAAGGAAGCTGAAGTGAAATCCCTGAAGGAGTCTGAGCGGTTGGAGAAGGAGATTGTTGAAGTTCAAGAAATGAAGAAAAAGATCAGCACCATGACTGCTGACGAGTACTTCGAGAAGCATCCTGAGCTGAGGAAGAAATTCGACGATGAAATCCGAAACGACTACTGGGGCTATTGA

Protein sequence

MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

Homology

[Close]

BLAST of Cp4.1LG09g04310 vs. ExPASy Swiss-Prot
Match: Q9FT52 (ATP synthase subunit d, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g52300 PE=1 SV=3)

HSP 1 Score: 282.3 bits (721), Expect = 3.5e-75
Identity = 138/168 (82.14%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60
           MSG  KK+ DVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPE
Sbjct: 1   MSGAGKKIADVAFKASRTIDWDGMAKVLVTDEARREFSNLRRAFDEVNTQLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120
           PIDW+YYRKGIG+ +VD YKEAYDSIE+PK+VD VTP+YKPKFDALLVELKEAE KSLKE
Sbjct: 61  PIDWDYYRKGIGAGIVDKYKEAYDSIEIPKYVDKVTPEYKPKFDALLVELKEAEQKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEI +VQE+ KK+STMTADEYFEKHPEL+KKFDDEIRND WGY
Sbjct: 121 SERLEKEIADVQEISKKLSTMTADEYFEKHPELKKKFDDEIRNDNWGY 168

[Close]

BLAST of Cp4.1LG09g04310 vs. NCBI nr
Match: XP_023541261.1 (ATP synthase subunit d, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327 bits (839), Expect = 7.48e-113
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60
           MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE
Sbjct: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
           SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of Cp4.1LG09g04310 vs. NCBI nr
Match: XP_022966719.1 (ATP synthase subunit d, mitochondrial [Cucurbita maxima])

HSP 1 Score: 326 bits (836), Expect = 2.14e-112
Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60
           MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE
Sbjct: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
           SERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of Cp4.1LG09g04310 vs. NCBI nr
Match: XP_022945159.1 (ATP synthase subunit d, mitochondrial [Cucurbita moschata] >KAG6573823.1 ATP synthase subunit d, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012890.1 ATP synthase subunit d, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 324 bits (830), Expect = 1.76e-111
Identity = 165/168 (98.21%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60
           MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPE
Sbjct: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFD+LLVELKEAEVKSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDSLLVELKEAEVKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
           SERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of Cp4.1LG09g04310 vs. NCBI nr
Match: XP_004142418.1 (ATP synthase subunit d, mitochondrial [Cucumis sativus] >KGN52290.1 hypothetical protein Csa_007810 [Cucumis sativus])

HSP 1 Score: 319 bits (817), Expect = 1.69e-109
Identity = 161/168 (95.83%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60
           MSGT+KKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPE
Sbjct: 1   MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYKPKFDALLVELKEAE KSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
           SERLEKEI EVQEMKKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of Cp4.1LG09g04310 vs. NCBI nr
Match: XP_022139222.1 (ATP synthase subunit d, mitochondrial [Momordica charantia])

HSP 1 Score: 319 bits (817), Expect = 1.69e-109
Identity = 161/168 (95.83%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60
           MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNS+LQTKFSQEPE
Sbjct: 1   MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAE KSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
           SERLEKE+VEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of Cp4.1LG09g04310 vs. ExPASy TrEMBL
Match: A0A6J1HUL8 (ATP synthase subunit d, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111466347 PE=3 SV=1)

HSP 1 Score: 326 bits (836), Expect = 1.04e-112
Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60
           MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE
Sbjct: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
           SERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of Cp4.1LG09g04310 vs. ExPASy TrEMBL
Match: A0A6J1G072 (ATP synthase subunit d, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111449482 PE=3 SV=1)

HSP 1 Score: 324 bits (830), Expect = 8.53e-112
Identity = 165/168 (98.21%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60
           MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPE
Sbjct: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFD+LLVELKEAEVKSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDSLLVELKEAEVKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
           SERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of Cp4.1LG09g04310 vs. ExPASy TrEMBL
Match: A0A0A0KRL4 (ATP synthase subunit d, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G623540 PE=3 SV=1)

HSP 1 Score: 319 bits (817), Expect = 8.20e-110
Identity = 161/168 (95.83%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60
           MSGT+KKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPE
Sbjct: 1   MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYKPKFDALLVELKEAE KSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
           SERLEKEI EVQEMKKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of Cp4.1LG09g04310 vs. ExPASy TrEMBL
Match: A0A6J1CDD8 (ATP synthase subunit d, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111010189 PE=3 SV=1)

HSP 1 Score: 319 bits (817), Expect = 8.20e-110
Identity = 161/168 (95.83%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60
           MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNS+LQTKFSQEPE
Sbjct: 1   MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAE KSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
           SERLEKE+VEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of Cp4.1LG09g04310 vs. ExPASy TrEMBL
Match: A0A5D3CDC0 (ATP synthase subunit d, mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002870 PE=3 SV=1)

HSP 1 Score: 317 bits (812), Expect = 4.74e-109
Identity = 161/168 (95.83%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60
           MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPE
Sbjct: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120
           PIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYKPKFDALLVELKEAE KSLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
           SERLEKEI EV+EMK+KI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of Cp4.1LG09g04310 vs. TAIR 10
Match: AT3G52300.1 (ATP synthase D chain, mitochondrial )

HSP 1 Score: 282.3 bits (721), Expect = 2.5e-76
Identity = 138/168 (82.14%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60
           MSG  KK+ DVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPE
Sbjct: 1   MSGAGKKIADVAFKASRTIDWDGMAKVLVTDEARREFSNLRRAFDEVNTQLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120
           PIDW+YYRKGIG+ +VD YKEAYDSIE+PK+VD VTP+YKPKFDALLVELKEAE KSLKE
Sbjct: 61  PIDWDYYRKGIGAGIVDKYKEAYDSIEIPKYVDKVTPEYKPKFDALLVELKEAEQKSLKE 120

Query: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEI +VQE+ KK+STMTADEYFEKHPEL+KKFDDEIRND WGY
Sbjct: 121 SERLEKEIADVQEISKKLSTMTADEYFEKHPELKKKFDDEIRNDNWGY 168

[Close]

BLAST of Cp4.1LG09g04310 vs. TAIR 10
Match: AT3G52300.2 (ATP synthase D chain, mitochondrial )

HSP 1 Score: 183.3 bits (464), Expect = 1.6e-46
Identity = 84/108 (77.78%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 1   MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60
           MSG  KK+ DVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPE
Sbjct: 1   MSGAGKKIADVAFKASRTIDWDGMAKVLVTDEARREFSNLRRAFDEVNTQLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLV 109
           PIDW+YYRKGIG+ +VD YKEAYDSIE+PK+VD VTP+YKPKFDAL++
Sbjct: 61  PIDWDYYRKGIGAGIVDKYKEAYDSIEIPKYVDKVTPEYKPKFDALVI 108

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g04310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FT52	3.5e-75	82.14	ATP synthase subunit d, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g523...	[more]

BLAST of Cp4.1LG09g04310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541261.1	7.48e-113	100.00	ATP synthase subunit d, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022966719.1	2.14e-112	99.40	ATP synthase subunit d, mitochondrial [Cucurbita maxima]	[more]
XP_022945159.1	1.76e-111	98.21	ATP synthase subunit d, mitochondrial [Cucurbita moschata] >KAG6573823.1 ATP syn...	[more]
XP_004142418.1	1.69e-109	95.83	ATP synthase subunit d, mitochondrial [Cucumis sativus] >KGN52290.1 hypothetical...	[more]
XP_022139222.1	1.69e-109	95.83	ATP synthase subunit d, mitochondrial [Momordica charantia]	[more]

BLAST of Cp4.1LG09g04310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HUL8	1.04e-112	99.40	ATP synthase subunit d, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC11146634...	[more]
A0A6J1G072	8.53e-112	98.21	ATP synthase subunit d, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111449...	[more]
A0A0A0KRL4	8.20e-110	95.83	ATP synthase subunit d, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G623540...	[more]
A0A6J1CDD8	8.20e-110	95.83	ATP synthase subunit d, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A5D3CDC0	4.74e-109	95.83	ATP synthase subunit d, mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Cp4.1LG09g04310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52300.1	2.5e-76	82.14	ATP synthase D chain, mitochondrial	[more]
AT3G52300.2	1.6e-46	77.78	ATP synthase D chain, mitochondrial	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 107..141
None	No IPR available	PANTHER	PTHR12700:SF18	ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL	coord: 1..168
IPR008689	ATP synthase, F0 complex, subunit D, mitochondrial	PFAM	PF05873	Mt_ATP-synt_D	coord: 15..166 e-value: 1.1E-18 score: 67.6
IPR008689	ATP synthase, F0 complex, subunit D, mitochondrial	PIRSF	PIRSF005514	Mitoh_ATP-synt_D	coord: 9..168 e-value: 1.7E-39 score: 132.9
IPR008689	ATP synthase, F0 complex, subunit D, mitochondrial	PANTHER	PTHR12700	ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL	coord: 1..168
IPR036228	ATP synthase, F0 complex, subunit D superfamily, mitochondrial	GENE3D	6.10.280.70		coord: 14..141 e-value: 1.7E-34 score: 120.4
IPR036228	ATP synthase, F0 complex, subunit D superfamily, mitochondrial	SUPERFAMILY	161065	ATP synthase D chain-like	coord: 15..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g04310.1	Cp4.1LG09g04310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0000274	mitochondrial proton-transporting ATP synthase, stator stalk
cellular_component	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function	GO:0015078	proton transmembrane transporter activity