Cp4.1LG09g04120 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g04120
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Unknown protein
Location	Cp4.1LG09: 2539468 .. 2541589 (-)
RNA-Seq Expression	Cp4.1LG09g04120
Synteny	Cp4.1LG09g04120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCTTAAAGGGGTATGTCGGGCTAAGCGGCGCCATAATTACGCAGCTCTTCCACGCATTCTACGGCTCCGACACCAAATCCTTAATACTCCTAATCGGATGGCTTCCGGCGGCCATATCCTTCGCATTTTTACGAACAATTCGGATCATGAAAGTAATCCGACAGCCAAACGAGCTCAAAGTCTTCTACAATTTCCTCTACATTTCCCTCGCCCTCGCCGGATTCCTAATGCTAATGATCATCATAGAAAGCAAATTAATATTCACCCAAGCCGAATTCGGTGGCAGCGCCGCCGTCGTCCTCCTCCTCCTCTTCCTCCCTCTCGCCGTCGTCATCGTCGAAGAATACAACCTCTCAAAACTCAAATCCGCCGCCATTAATCCCCCAAACCCACTTCAAATCCTTACAGAGAAACCCAATCCCCCAAAAACAGAGCCCAGGAAACAACCCTCTTGCTGGACAACAATCTTCAACCCGCCGGAGCGCGGCGAGGATTTCACGATTCTCCAAGCTCTGTTCAGCTTGGACATGGCGATTCTGTTCTTCTCTGCAATTTGCGGCGTCGGCGGAACTTTGACGGCGATTGACAATCTGGGTCAGATTGGAATGTCCTTAGGATACCCAAAAAGAAGCATTAGCACATTCGTGACACTCGTTAGTATATGGAATTACCTCGGACGTGTCGCCTCTGGTTTTGTCTCTGAAATTGTTCTAACAAAATACAAATTCCCACGTCCTTTAATGCTTTCTTTAACGCTTCTTTTGTCATGTGTCGGTCATTTGATCATCGCCTTCGCCGTTCCAAATGGGCTTTATGTAGCTTCAATCGTGATCGGATTCTGTTTCGGAGCTCAGTGGCCGTTGCTTTTCGCCATAATTTCCGAGCTATTTGGGTTGAAATATTACTCTACGCTTTACAATTTCGGGTCGGTGGCTAGTCCGATTGGATTATACGTTTTGAATGTGAAAGTGGCCGGGAATTTGTACGACAAAGAGGCGGCGAAGCAGCTGGCGGCGAAAGGGCTTGTGAGAAAAACAGGGGAGGAGCTGAAATGCTACGGCGGAGAGTGTTTTAAGCGGTCGTTTCTTGTAATCACCGGAGTTACTTTGTTGGGTATGTTTGTTTCGTTGATTTTAGTGATTAGGACGAGGGGTTTTTACAAGAGTGATATTTATAAGAAGTTTCGAGATGAAGCTGAAGCAGAGGTGGTCGGAAATGGCGCTGTGGCGGCCGCCGGAGCACCGGAGGAGACGAGAAGCCGATAGGGGTGTGTTTGGCGGGAAAGAAAATGAGGTGAAATCCGCCGGAGCGGCGGCGGAGACGAGGAACCGACAGGGATGGGTTTGATTTGAGAGTGAAGATTTTTGTTGTCCTTTGTCGAAACATTAAAATTTCCGAACTTTGTGAGAAAATAATTTACATGTTTCATCGCTAAGTTTCTAATAGAAGATATTATTGTAATTTTCATACTTATTTTAAGTACTAGAACCCATTATCTATAAAAAAAAANTTCATACTTATTTTAAGTACTAGAACCCATTATCTATAAAAAATAATAATAATAATAATAATAATAAAATAAAAAACCAATTCGAGCCTAGTTTAAAGGGTAAAACTGTCATTTACTTATTATCAGCGATCGTTTATGCCAACTTANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTAATTATTTATTTGAATTGTGAACAGGTATCTTAAAGGGGTATGTCGGGCTAAGCGGCGCCATAATTACGCAGCTCTTCCACGCATTCTACGGCTCCGACACCAAATCCTTAATACTCCTAATCGGATGGCTTCCGGCGGCCATATCCTTCGCATTTTTACGAACAATTCGGATCATGAAAGTAATCCGACAGCCAAACGAGCTCAAAGTCTTCTACAATTTCCTCTACATTTCCCTCGCCCTCGCCGGATTCCTAATGCTAATGATCATCATAGAAAGCAAATTAATATTCACCCAAGCCGAATTCGGTGGCAGCGCCGCCGTCGTCCTCCTCCTCCTCTTCCTCCCTCTCGCCGTCGTCATCGTCGAAGAATACAACCTCTCAAAACTCAAATCCGCCGCCAT

mRNA sequence

TATCTTAAAGGGGTATGTCGGGCTAAGCGGCGCCATAATTACGCAGCTCTTCCACGCATTCTACGGCTCCGACACCAAATCCTTAATACTCCTAATCGGATGGCTTCCGGCGGCCATATCCTTCGCATTTTTACGAACAATTCGGATCATGAAAGTAATCCGACAGCCAAACGAGCTCAAAGTCTTCTACAATTTCCTCTACATTTCCCTCGCCCTCGCCGGATTCCTAATGCTAATGATCATCATAGAAAGCAAATTAATATTCACCCAAGCCGAATTCGGTGGCAGCGCCGCCGTCGTCCTCCTCCTCCTCTTCCTCCCTCTCGCCGTCGTCATCGGGTATGTCGGGCTAAGCGGCGCCATAATTACGCAGCTCTTCCACGCATTCTACGGCTCCGACACCAAATCCTTAATACTCCTAATCGGATGGCTTCCGGCGGCCATATCCTTCGCATTTTTACGAACAATTCGGATCATGAAAGTAATCCGACAGCCAAACGAGCTCAAAGTCTTCTACAATTTCCTCTACATTTCCCTCGCCCTCGCCGGATTCCTAATGCTAATGATCATCATAGAAAGCAAATTAATATTCACCCAAGCCGAATTCGGTGGCAGCGCCGCCGTCGTCCTCCTCCTCCTCTTCCTCCCTCTCGCCGTCGTCATCGTCGAAGAATACAACCTCTCAAAACTCAAATCCGCCGCCAT

Coding sequence (CDS)

TATCTTAAAGGGGTATGTCGGGCTAAGCGGCGCCATAATTACGCAGCTCTTCCACGCATTCTACGGCTCCGACACCAAATCCTTAATACTCCTAATCGGATGGCTTCCGGCGGCCATATCCTTCGCATTTTTACGAACAATTCGGATCATGAAAGTAATCCGACAGCCAAACGAGCTCAAAGTCTTCTACAATTTCCTCTACATTTCCCTCGCCCTCGCCGGATTCCTAATGCTAATGATCATCATAGAAAGCAAATTAATATTCACCCAAGCCGAATTCGGTGGCAGCGCCGCCGTCGTCCTCCTCCTCCTCTTCCTCCCTCTCGCCGTCGTCATCGGGTATGTCGGGCTAAGCGGCGCCATAATTACGCAGCTCTTCCACGCATTCTACGGCTCCGACACCAAATCCTTAATACTCCTAATCGGATGGCTTCCGGCGGCCATATCCTTCGCATTTTTACGAACAATTCGGATCATGAAAGTAATCCGACAGCCAAACGAGCTCAAAGTCTTCTACAATTTCCTCTACATTTCCCTCGCCCTCGCCGGATTCCTAATGCTAATGATCATCATAGAAAGCAAATTAATATTCACCCAAGCCGAATTCGGTGGCAGCGCCGCCGTCGTCCTCCTCCTCCTCTTCCTCCCTCTCGCCGTCGTCATCGTCGAAGAATACAACCTCTCAAAACTCAAATCCGCCGCCAT

Protein sequence

YLKGVCRAKRRHNYAALPRILRLRHQILNTPNRMASGGHILRIFTNNSDHESNPTAKRAQSLLQFPLHFPRPRRIPNANDHHRKQINIHPSRIRWQRRRRPPPPLPPSRRRHRVCRAKRRHNYAALPRILRLRHQILNTPNRMASGGHILRIFTNNSDHESNPTAKRAQSLLQFPLHFPRPRRIPNANDHHRKQINIHPSRIRWQRRRRPPPPLPPSRRRHRRRIQPLKTQIRRH

Homology

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g04120 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG09g04120 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG09g04120 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG09g04120 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g04120.1	Cp4.1LG09g04120.1	mRNA