Cp4.1LG09g03970 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG09g03970
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUDP-glycosyltransferase family protein
LocationCp4.1LG09: 2427955 .. 2428372 (-)
RNA-Seq ExpressionCp4.1LG09g03970
SyntenyCp4.1LG09g03970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATGGAGATGACTCCGGCTTTGGTGGTCTCGGCTTCATTATGTTCAGTGACCGCTCTCTTTCGTGGTGAAATCTTAAGCAGCATCAGGAGCAAGGCAGTGTGTCGTCTGATTGTCTTATCTCGCGTTCTCGATCAAACCTGGTTTGATCGCTAATGGTTTGCGTTTAGAAGGAGAGCGTTCTTCGTTTTTTGCTGGCTTTTCGTTGCTCATGTTGTTCATTGTTTCGTTGTTTCTGGAGAGTCAGATGACTTCGGTGTTCTTACTGCAGAGGATTCCTCGGAGGTTCATAGAAGGTAATGATCTCGATCGATTGCGCTTTGAGGATCTTTTTGGTTATCAGAAATCGAAGCTTGCTCTGGTGAGTGTTCGAGTTCCGAATCTTTCTTGTATTCTCAAGTTATGGTTTAATTAG

mRNA sequence

ATGGCGATGGAGATGACTCCGGCTTTGGTGGTCTCGGCTTCATTATGTTCAGTGACCGCTCTCTTTCGTGGAGAGCGTTCTTCGTTTTTTGCTGGCTTTTCGTTGCTCATGTTGTTCATTGTTTCGTTGTTTCTGGAGAGTCAGATGACTTCGGTGTTCTTACTGCAGAGGATTCCTCGGAGGTTCATAGAAGGTAATGATCTCGATCGATTGCGCTTTGAGGATCTTTTTGGTTATCAGAAATCGAAGCTTGCTCTGGTGAGTGTTCGAGTTCCGAATCTTTCTTGTATTCTCAAGTTATGGTTTAATTAG

Coding sequence (CDS)

ATGGCGATGGAGATGACTCCGGCTTTGGTGGTCTCGGCTTCATTATGTTCAGTGACCGCTCTCTTTCGTGGAGAGCGTTCTTCGTTTTTTGCTGGCTTTTCGTTGCTCATGTTGTTCATTGTTTCGTTGTTTCTGGAGAGTCAGATGACTTCGGTGTTCTTACTGCAGAGGATTCCTCGGAGGTTCATAGAAGGTAATGATCTCGATCGATTGCGCTTTGAGGATCTTTTTGGTTATCAGAAATCGAAGCTTGCTCTGGTGAGTGTTCGAGTTCCGAATCTTTCTTGTATTCTCAAGTTATGGTTTAATTAG

Protein sequence

MAMEMTPALVVSASLCSVTALFRGERSSFFAGFSLLMLFIVSLFLESQMTSVFLLQRIPRRFIEGNDLDRLRFEDLFGYQKSKLALVSVRVPNLSCILKLWFN
Homology
[Close]
BLAST of Cp4.1LG09g03970 vs. NCBI nr
Match: XP_022139219.1 (uncharacterized protein LOC111010187 [Momordica charantia])

HSP 1 Score: 67.8 bits (164), Expect = 3.86e-11
Identity = 44/90 (48.89%), Postives = 54/90 (60.00%), Query Frame = 0 

Query: 22  FRGERSSFF--AGFSLLMLFIVSLFLESQMTSVFLL----------------------QR 81
           F   R SFF  AGF+L +L +VSLFLES+MTSVF+                       QR
Sbjct: 63  FAFRRRSFFVFAGFALFLLCMVSLFLESRMTSVFMKKREKAWSRDAELELGMTLKFVPQR 122

Query: 82  IPRRFIEGNDLDRLRFEDLFGYQKSKLALV 87
           IPRRFIEGN+LDR+R ED  G +K +LAL+
Sbjct: 123 IPRRFIEGNELDRMRSEDHRGVRKPRLALI 152

[Close]
BLAST of Cp4.1LG09g03970 vs. NCBI nr
Match: KAA0034680.1 (UDP-glycosyltransferase family protein [Cucumis melo var. makuwa] >TYK09231.1 UDP-glycosyltransferase family protein [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 1.11e-10
Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = 0 

Query: 24  GERSSF-FAGFSLLMLFIVSLFLESQMTSVFLL----------------------QRIPR 83
             RS F FAGFSLL+LF+V+ +LES MTSVFL                       QRIPR
Sbjct: 66  SRRSIFAFAGFSLLLLFVVTFYLESLMTSVFLKRSEKAWSRDAELKLGMTLKFAPQRIPR 125

Query: 84  RFIEGNDLDRLRFEDLFGYQKSKLALV 87
           +FIEGN++DRL  ++ FG++K +LAL+
Sbjct: 126 KFIEGNEVDRLHSDNRFGFRKPRLALI 152

[Close]
BLAST of Cp4.1LG09g03970 vs. NCBI nr
Match: XP_038891990.1 (uncharacterized protein LOC120081305 [Benincasa hispida] >XP_038891991.1 uncharacterized protein LOC120081305 [Benincasa hispida])

HSP 1 Score: 67.8 bits (164), Expect = 1.51e-10
Identity = 46/103 (44.66%), Postives = 60/103 (58.25%), Query Frame = 0 

Query: 22  FRGERSSFF--AGFSLLMLFIVSLFLESQMTSVFLL----------------------QR 81
           F   R SFF  AGF+LL+LF+VS +LES MTSVFL                       QR
Sbjct: 63  FAFSRRSFFVCAGFALLLLFMVSFYLESLMTSVFLERSEKAWSRDSELKLGMTLKFVPQR 122

Query: 82  IPRRFIEGNDLDRLRFEDLFGYQKSKLALV--SVRVPNLSCIL 98
           IPR+FIEGN +DR   ED FG++K +LAL+  ++   +LS +L
Sbjct: 123 IPRKFIEGNKVDRSHSEDRFGFRKPRLALILRNMEKDSLSLLL 165

[Close]
BLAST of Cp4.1LG09g03970 vs. NCBI nr
Match: XP_022993256.1 (uncharacterized protein LOC111489326 [Cucurbita maxima] >XP_022993265.1 uncharacterized protein LOC111489326 [Cucurbita maxima])

HSP 1 Score: 63.5 bits (153), Expect = 4.64e-09
Identity = 42/90 (46.67%), Postives = 50/90 (55.56%), Query Frame = 0 

Query: 22  FRGERSSFF--AGFSLLMLFIVSLFLESQMTSVFLL----------------------QR 81
           F   R SFF  A F L  LF+V LFLES MTSVFL                       QR
Sbjct: 63  FSFRRRSFFILAFFVLFTLFMVQLFLESSMTSVFLKRSKKASSREAELKPGRTLKFVPQR 122

Query: 82  IPRRFIEGNDLDRLRFEDLFGYQKSKLALV 87
           IPR+FIEGN++DRL  ED  G++K +LAL+
Sbjct: 123 IPRKFIEGNEVDRLHLEDHVGFRKPRLALI 152

[Close]
BLAST of Cp4.1LG09g03970 vs. NCBI nr
Match: XP_022956546.1 (uncharacterized protein LOC111458257 [Cucurbita moschata] >XP_022956547.1 uncharacterized protein LOC111458257 [Cucurbita moschata])

HSP 1 Score: 58.5 bits (140), Expect = 2.66e-07
Identity = 38/88 (43.18%), Postives = 46/88 (52.27%), Query Frame = 0 

Query: 22  FRGERSSFFAGFSLLMLFIVSLFLESQMTSVFLL----------------------QRIP 81
           FR       A F L  LF+  LFLES MTSVFL                       QRIP
Sbjct: 65  FRRRSFIVLAFFVLFTLFMFQLFLESSMTSVFLKRSKKAWPREAELKPGRTLKFVPQRIP 124

Query: 82  RRFIEGNDLDRLRFEDLFGYQKSKLALV 87
           R+FIEGN++DRL  ED  G++K +LAL+
Sbjct: 125 RKFIEGNEVDRLHSEDHVGFRKPRLALI 152

[Close]
BLAST of Cp4.1LG09g03970 vs. ExPASy TrEMBL
Match: A0A6J1CCB0 (uncharacterized protein LOC111010187 OS=Momordica charantia OX=3673 GN=LOC111010187 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.87e-11
Identity = 44/90 (48.89%), Postives = 54/90 (60.00%), Query Frame = 0 

Query: 22  FRGERSSFF--AGFSLLMLFIVSLFLESQMTSVFLL----------------------QR 81
           F   R SFF  AGF+L +L +VSLFLES+MTSVF+                       QR
Sbjct: 63  FAFRRRSFFVFAGFALFLLCMVSLFLESRMTSVFMKKREKAWSRDAELELGMTLKFVPQR 122

Query: 82  IPRRFIEGNDLDRLRFEDLFGYQKSKLALV 87
           IPRRFIEGN+LDR+R ED  G +K +LAL+
Sbjct: 123 IPRRFIEGNELDRMRSEDHRGVRKPRLALI 152

[Close]
BLAST of Cp4.1LG09g03970 vs. ExPASy TrEMBL
Match: A0A5D3CBN1 (UDP-glycosyltransferase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002250 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.36e-11
Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = 0 

Query: 24  GERSSF-FAGFSLLMLFIVSLFLESQMTSVFLL----------------------QRIPR 83
             RS F FAGFSLL+LF+V+ +LES MTSVFL                       QRIPR
Sbjct: 66  SRRSIFAFAGFSLLLLFVVTFYLESLMTSVFLKRSEKAWSRDAELKLGMTLKFAPQRIPR 125

Query: 84  RFIEGNDLDRLRFEDLFGYQKSKLALV 87
           +FIEGN++DRL  ++ FG++K +LAL+
Sbjct: 126 KFIEGNEVDRLHSDNRFGFRKPRLALI 152

[Close]
BLAST of Cp4.1LG09g03970 vs. ExPASy TrEMBL
Match: A0A0A0KUV3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G616910 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.25e-09
Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = 0 

Query: 22  FRGERSSFF--AGFSLLMLFIVSLFLESQMTSVFLLQ----------------------R 81
           F   R SFF     +LL+LF+++ +LES MTSVFL +                      R
Sbjct: 63  FAFSRRSFFIFTAIALLLLFVLTFYLESLMTSVFLKRSEKAWSRDAELKVGVTLMFAPRR 122

Query: 82  IPRRFIEGNDLDRLRFEDLFGYQKSKLALVSVRVPNLSCIL 98
           IPR+FIE N++D++  E+ FG++  +LALVS RV  LS IL
Sbjct: 123 IPRKFIESNEVDQMHSENRFGFRNPRLALVSDRVSILSYIL 163

[Close]
BLAST of Cp4.1LG09g03970 vs. ExPASy TrEMBL
Match: A0A6J1JVU1 (uncharacterized protein LOC111489326 OS=Cucurbita maxima OX=3661 GN=LOC111489326 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.25e-09
Identity = 42/90 (46.67%), Postives = 50/90 (55.56%), Query Frame = 0 

Query: 22  FRGERSSFF--AGFSLLMLFIVSLFLESQMTSVFLL----------------------QR 81
           F   R SFF  A F L  LF+V LFLES MTSVFL                       QR
Sbjct: 63  FSFRRRSFFILAFFVLFTLFMVQLFLESSMTSVFLKRSKKASSREAELKPGRTLKFVPQR 122

Query: 82  IPRRFIEGNDLDRLRFEDLFGYQKSKLALV 87
           IPR+FIEGN++DRL  ED  G++K +LAL+
Sbjct: 123 IPRKFIEGNEVDRLHLEDHVGFRKPRLALI 152

[Close]
BLAST of Cp4.1LG09g03970 vs. ExPASy TrEMBL
Match: A0A6J1GWM9 (uncharacterized protein LOC111458257 OS=Cucurbita moschata OX=3662 GN=LOC111458257 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.29e-07
Identity = 38/88 (43.18%), Postives = 46/88 (52.27%), Query Frame = 0 

Query: 22  FRGERSSFFAGFSLLMLFIVSLFLESQMTSVFLL----------------------QRIP 81
           FR       A F L  LF+  LFLES MTSVFL                       QRIP
Sbjct: 65  FRRRSFIVLAFFVLFTLFMFQLFLESSMTSVFLKRSKKAWPREAELKPGRTLKFVPQRIP 124

Query: 82  RRFIEGNDLDRLRFEDLFGYQKSKLALV 87
           R+FIEGN++DRL  ED  G++K +LAL+
Sbjct: 125 RKFIEGNEVDRLHSEDHVGFRKPRLALI 152

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g03970 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG09g03970 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022139219.13.86e-1148.89uncharacterized protein LOC111010187 [Momordica charantia][more]
KAA0034680.11.11e-1047.13UDP-glycosyltransferase family protein [Cucumis melo var. makuwa] >TYK09231.1 UD... [more]
XP_038891990.11.51e-1044.66uncharacterized protein LOC120081305 [Benincasa hispida] >XP_038891991.1 unchara... [more]
XP_022993256.14.64e-0946.67uncharacterized protein LOC111489326 [Cucurbita maxima] >XP_022993265.1 uncharac... [more]
XP_022956546.12.66e-0743.18uncharacterized protein LOC111458257 [Cucurbita moschata] >XP_022956547.1 unchar... [more]
BLAST of Cp4.1LG09g03970 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CCB01.87e-1148.89uncharacterized protein LOC111010187 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A5D3CBN15.36e-1147.13UDP-glycosyltransferase family protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A0A0KUV31.25e-0940.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G616910 PE=4 SV=1[more]
A0A6J1JVU12.25e-0946.67uncharacterized protein LOC111489326 OS=Cucurbita maxima OX=3661 GN=LOC111489326... [more]
A0A6J1GWM91.29e-0743.18uncharacterized protein LOC111458257 OS=Cucurbita moschata OX=3662 GN=LOC1114582... [more]
BLAST of Cp4.1LG09g03970 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g03970.1Cp4.1LG09g03970.1mRNA