Cp4.1LG09g03750 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g03750
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Pentatricopeptide repeat-containing protein
Location	Cp4.1LG09: 2219443 .. 2227241 (-)
RNA-Seq Expression	Cp4.1LG09g03750
Synteny	Cp4.1LG09g03750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCACCAGGTGGAGGGAGCATGAAAACAAACCAGAGGCTAAAGAGGGATAAAGATAATGGATGTTCGTTCACTCTCAAACGCCACCTCCACCACTTCCTCCGCCGTCTTCGCGCCACCTCGCCGTCGTCACCACCATTCTCACCCTTCTTCCGCCCTAATTGTTTTCTCATTGAAGCGTCCGCCTCCGCCGCCGCCGCCGTCTCGTTCCGATTCAGACGATTCCTCCGGCTCAACCACCTCAATCTCTGGCCGAATTCGTCGCCCACAAATCCTAAAAACCTCTTCCTCCCCTAAACGCACCACCTCTAAAGTTCCGTCTAATCCTCTCAAGAATCTGGTCGGCTCTGCCAATGCTCCCGTTCTTCCTTTGCCACCGCCGCCTCCTGTTTCCCACTCGCTCGCCGACAAGCTCTGGCTTTCCAGTAAGCTCTCTCCACCGCCTCCTCCGATCACCGAGATGCCAGAGGAAGATGAAAGCGAAAACGAAGAAATTGAAACCGAGGATTCTTCGAGTGAGGGGCGGAGAGAAGTTCAATTCCGCCAAGAGGGTAAGATTTTTGTTGGGAACTTGCCTAATTGGATAAAGAAGCATGAGGTTCAACAGTTTTTTCGGCAGTTTGGTCCTGTCAACAATGTGATATTGATTAAGGGCCACGATACTACGAAAAGAAATGCCGGATACGGATTCGTCATATATGATGGGTCGACTGCAGCTAAGTCGGCCATGAAAGCCGTTGAGTTTGATGGAGTGGAGTTTCACGGAAGGGTTTTGACTGTGAAATTGGATGATGGAAGGAGGTTAAAGGAGAAGGCGTATGAGAGGGCGAAATGGATGGAGGGAGATGACAGTGTGGAGTTTCGTTCACAATGGCATGAAGAGAGGGATAAAGCACGGAAGAGCTTTCGCATGGTTATTGAGACAGAGCCGGAGGATTGGCAGGCGGTTGTCTCAGCCTTCGAGAGGATTAAAAAGGTAGCTTCTTCAATTCCTTTGGAATGTTTTTGAATTAGCGGCTTCTTGAATAAATTATGTGTTTACAATATGGTTCTTGATGGATTGTTTTTCAAGTTATGTAAATTCTTATTCAGAATCTCAACTCAAGTTCGGGTCAAATAATTTCTCCGCAGTTCTAGGTCGATATTGCTAACTTCGAGCAAGGGACCATGACCTATTGTATTACAAGTTCATATTTCCTCAGGTGTCTTGCATTTTTCATGGCTATTTTATCTATGTTTGGTTAGATAACTCCTTGGCAGTAGTGTAATATCTCGTGGATGGTGTGTTCTCTAATTACAAGTACATATGTCATTTATACTCGACGTTTTTGTTCTTTCATTTTATCTAAGTCAAAGCTTGGTTTTCAAAAAAAGAGGGTATAATAGTTAGTGAGTGTAGTAGCCCAAGCCCACAGCTAGCAGATGTTGTCCTCTTTTCCCTTTCGGGATTTCCCTCAAGAATTTAAAACGCGTCTGCTAAGGAGAGGTTTTCACACCCTTATAAAGAATGTTTTGTTCTCCTCCCCAACCGATATGGGATCTCACAGTGAGGTTTGCAGAATTAGATGTAGACTTCATGGTACATACTTTAATCTGGTACATACTTTAGTTCACAACAGATGTATGTATGCTTTTGGAATAGATTTTGCTTATAACTGACAATTCTGGGTTTTCCATGAATTTTGCTGTTTGTTTTGAGAGTTGTATTCAAGCTTAGTATGTGTTTTAATACAACAAAGTATCGTCATGCCTACTTGAATCCGTTCATTCAAACTTGCACCCACGATGACAAATTCATGTGCAATAGTGTATGCAAGCTCTGAAACATGTCACATTCACCGTATACGTATTCTTTAGAGGACTGAATTTGGACATTTCATATTAATTGTTTTGATATTTTTTGTTGTTATGGGGTGAATTGTACTATCTTCAAGCCTTCTAGGAAGGAGTACAGTTTGATGGTGAACTACTATGCAAGAAGAGGTGATATGCATCGTGCACGTGAAACATTTGAAAAGATGCGGGCTAGAGGAATAGAACCCACGACTCATGTCTACACAAAGTAATAACTATTCCTAAACATTTCTCTTTCCTTTTATTATGTTTCAAATATATTGATTCAAGCTTAATTTATTTTGAGTGCTTCATGATGCGCAGCCTTATACATGCTTATGCAGTGGGTAGAGATATGGAAGAAGCATTATCTTGTGTCAGAAAAATGAAAGAGGAAGGCATAGAAATGAGTTTGGTAACTTACAGCATTCTTGTGGGTGGATTTGCCAAAATGGGAAATGCAGAGTAAGTAATTATCATTTCATGTGTGACTACATAGGTTCATAGAGTTTTCATTATATATAAGCTTTGCCCTGTTATTTTCAAGACTGATTTTCTTGCCATTCGTTTCCATTGTTGATTGGTAAAACCTACAGATACCAAATGGTCAATCACTTTAGTGATACCTAGCTCTCATCTGAAAAAAGGTTGTGCATGTCTTCTCAGATCTTATGAACATTTGATCAGGCTTCTTGACTATTGTGTATTGCCTTACTATTGTGTATTTAAGTTTATCAATTAAGGGCTTGTAGTCAGGCTTCTTGACTAATGTGTATTTAAGTTTATCAATTAAGGGCTTGTAGTCAAGTGGTGGCTGCCTTCATTACGAGGGTTCCATGGTAGTACTTTGTGAGATCCCACATCGGTGGGAGAGGGGAACAAACCATTCTTTACAAAGGTGTGGAAACTTCTCCCTAGTAGACACGTTTTAAAACCTTGAGGGGAAGCCCAGAAGAGAAAGCCCAAAGAGGACAATATCTGTTAGCAGTGGGCTTGGGCTTTTACAAATGATATCAGAGTCGGACACCGGCAGCGAGGACTTTGGGCTTCCAATGGGGGTGGATTGTGAGATCCCACATCGGTTAGAGAGGGGAACAAAGCATTCCTTACTACAAGTGTGTGGAAACCTCTCCCTACCAGACACGTTTTAAAATATCTGTTAGTAGACAATATCTGTTAGTAGTGGGCCTGGCCTGGGCTGTTACATGTTTCATTTTCAAGGAAGTTGAATCCTATTGCTGCAGGGAACTTTGCAGAAAATCATCCAAGGTTGCTTTTCGTCTGGCAGCCCAATGTTTGGTTGTAGGAAGTAGATGCTATTTTTCTGTATTATCTAGTCTTTTAGAGTTTGTTCTCTCAATTTATTTCAGTTTTCATATTCACTAGTCATTTTTCTTATATCTTTTTTTATCTAAATTGTATTACATTTGCATTTGTGTTGGAAGAGCTGCAGATCACTGGTTTCAGGAGGCGAAAGAGAAACACACGTTGAATGCCATCATTTATGGGAATATTATATATGCTTACTGGTAATTTCTGTTATCAATTCACTCTAATTACTTGACAAATGACAGATCATTGCTCTTTGTCGCTGAGTGTGTGCATGAGTTTTTCCCTTCTTTTTTTTTCTGTGGTTTTTTCTGTGGATTATTTTCTAGTATAATACAAGGTAAATACTATTTTATAATTAGCTACTATTTTATAATTAGCTAGTTTTGATTACAGTCAAATATGCAATATGGATAGAGCGGAAGCTTTGGTGAGGCAAATGGAAGAAGAAGGCATAGATGCTCCAATTGACATATATCACACCATGATGGATGGTTATACAATGGTTGGAGATGAGGAGAAATGTCTGCTTGTGTTCGAGAGATTTAAGGTACAATTCTATGGCAATAGGTTGAAGTAGATGTGTGCATGAGTTGATTTGTTTCCTCAAATCTTATGTCCTCGGTTCAGTTTATGGCGCCGAGCTCGGGTAATTTCTATTTTTTGAACAAGTGTCAACTAAAAGAAAAAATAGTTGGAGAGGTTCTGATTATTTTTTATCTGAAATCACAGAACAACCTACAATATTAGGATTAGTATCTCTTTCTTTTATGGTGCACCTTTAGTCGAACCACCCAACAAATGACCTCGATTCTAACGGCCCAGGCCCACCGCTAGCAAATATTGTCCTCTTTGGGCTTTTCATCAAGGTTTTTAAAACGTGTCTCCTAGGGAGAGGTTTTCACACCCTTATAAAGGGTGGTTCGTATTGTTAGATCCCACATCGGTTGAGGAGAAGAACGAAACACCCTTTATAAGGGTATGAAAACCTCTCCCTAGGAGACGCGTTTTAAAAACCTTGAGGGCAAGCCCGTAAGGGAAATCCCAAAGAAGACAATATCTGCTAGCGGTGGGCCTGGACCGTTACATCAATTGCATTGATAAAAAGAATTTTGACCTCAATGCTGAAAAACTGATTCACTTCAATCTCGTGTTCATGATTGTTTTCCATCAATTTTAATTTCTTTTCCTTTAAACATCTTATATTTTATTAACTATGATGCAGGAATGTGGTTTGAATCCTTCTGTCATTACATATGGGTGTCTTATTAATCTTTACACAAAGGTAAAAACCTATTCTTTTATTCCCAATATTACATTATTGTTTTCCTGATTCTTTAGAAGAAAATGAACTTTAACGTTAGAGTATCTATTTGTTAGGTTTGAATATTTGGTACTTCATTAGGACACTGAATGAATGAGTTTGGTTGGTCTCACTTTCTCATCTCTTTGAAGATCGTGATTTTGAAGATAACGACGCCTGTTGTTACAAACGTCAATTTTACACGATTTCTTGCATGCATATGATTGTAGATTCTCTTTGATTATCTTTCGCCCTTCCTTCATCGTTCTTTCAGCTCGGGAAAGTTTCTAAAGCTCTGGAAGTTAGCAAAGAAATGGAGCATGCTGGCATAAAACACAACATGAAGACCTACTCCATGTTGATCAATGGGTTCTTGAAGTTGAAAGATTGGGCTAATGCTTTCGCTATTTTTGAGGATTTGATCAAAGACGGTATTAAGCCTGATGTAGTACTCTATAATAATATCATCACAGCATTCTGTGGGATGGGGAAGATGGATCGTGCTGTTTGTACTGTCAAGGAAATGCAAAAACAAAGGCATAGGCCCACAACTCGAACATTTATGCCCATCATACATGGTTTTGCTAGGCAAGGGGACATGAGGAAAGCGCTAGATGTATTCGATATGATGCGGATGTCTGGATGCATTCCAACGGTGCACACTTACAATGCTCTGATTCTTGGTCTAGTTGAGAAGCGTAAGGTAATTCTTTCGAACTATGAAACGTTCCATGCCTATGGATGTTCCTTTCCTCAAGTAGTAGTTTTGAGCCATTAGATCCCGACTTTCCTCATTGAATCCTCAAATTCTCGAAGACCTTTGTGGAATGCTGACTCGATCCAACTTCTCGTGCGTATGAAACTAATTTTCCATGGACGTTTTTACATTATAATGGACAAGATCGTAGCTTCACTCTTATACCTGTACTATTTTAAAGAGCTCCCTGTTTACATTTTATTCTATCCTTCCAGATGGACAAGGCTGTAGAAATACTTGACGAGATGACGTTGGCTGGCGTAAGTCCAAATGAACACACATACACAACCATCATGCATGGTTATGCTTCTTTGGGGGATACCGGAAAAGCGTTCGCTTACTTCACTAAACTGAGGGATGAGGGTCTGAAGCTTGATGTTTATACATATGAAGCATTGCTTAAAGCATGCTGCAAATCAGGGAGGATGCAGAGCGCATTGGCAGTCACCAAGGAAATGAGTGCTCAAAATATCCCAAGAAACACCTTTATTTATAACATTTTAATTGATGGGTATGTTCTAGATGTGAGTAGGGTTGTACTTGTTACAGGATGAATTATTACTTGTAATTCTCTTTGCTTCTGCCTCGTTGCTACTAATTAGCTTTTTCCATATAGATGGGCTCGACGTGGCGATGTTTGGGAGGCGGCTGATCTAATACAACAAATGAAAAAAGAAGGGGTTCAACCTGACATTCATACCTACACATCCTTCATAAATGCTTGCTCCAAGGCTGGAGATATGCAGGTATTTGACAAAATCAAATAAGCCAAATCTTTTTAGTTTTTACATCATGGTGTCGTGACGACGTGGTGCGATGGTAACCTAGAGGTGATTTTAATTGCTTAAATGTGAGATCCAACGTCAATTGGAGAGAGGAACGAGTACCAGTGAAGACGCTGGGCCCCGAAAGGGGATGGATTGTGAGATCCTACATCAGTTGGAGAGTGGAACGAAACATTCTTTATAATAAGAGTATGGAAACCTCTCCCTAGCAGACACGTTTTAAAATCTTGAGGGGAAGCCCAGAAGAGAAAGTCCAAAAAGGACAATATCTGCTAGCGATGGGGGATGGGCGATGGGCTTGGACTGTTACCTTAAAGGTGATCTCATCTGAATTGATTATCAAATTCTGTCGTATCAGATAGTACATTATATCTTATTGTTGCCTGAATTAGTTTCTGATAGGATCAGTAAGAAAATAAATTTATGTTTGTTTGGTCTTCATAATTTGAAAGTTCTTGGGAAACGTGCAGTGGTCTACGGCTAGTTTGAGTGTTGGTTTCTAAGCATTTTGGTAACCATCCTTCGACTCATATTTGTTAGCTAGGTTCATCAGACATTGATTACCTACTATTCTTGGCATGTTCTAATTTCTAACTGGTTAGCTATTTTCCAGAGAGCAACAAAAACAATTGTAGAAATGAAATCAGCAGGAGTGAAGCCTAACGTTAAGACGTATACTACGCTAATTCACGGTTGGGCCCGTGCTTCTTTACCCGAGAAGGCATTGTCATGCTTTGCAGAGATGAAGATATCCGGGTTGAAGCCAGACAAAGCTGTTTACCATTGTCTAATGACGTCATTACTCTCGAGGGCTACCGTTGCAGAAGGAAGCATATATCCCGGCATTCTCTCCATCTGCAAAGAGATGGTCGATTCGGGATTAACCGTGGATATGGGGACAGCAGTTCACTGGTCCAAGTGCTTGCGCAAAATCGAGAGAACAGGTGGGGAGATAACTGAAGCCTTGCAGAAGACCTTCCCTCCCAATTGGAACTCATATAACAATGTCCACATGAGCTCCAGCCTAGACTCGGACGACGAATCTGGTATAAGTGACGATGAGGACGAAGACGATGATATATGTCAAGAGGAAGTATCCAACGCTCGGGACGACGATGTAGTTGGTAGATCATGGTTTTGAGTACACAAAAGCATAGAAACAAGCCTTTTAAGCATGCAAACAGAATCTCACTGCTAAAATGGTCAGTAGTTTGGCCCTACCTTGGCTTGATTTACATTGTTTTTTATGTATAGGCTTTGGATTTACTGCTCTGCTGTTTATTTGAATCTCGAACGTCTGAGTCGAGGGAATGCATCTTAACCATTTGACCTCTATCCAGAATGAACGGACGAGATCGATTTGGAAGTCGAAGTCGATGTGACACTGCCAAATTTAAAATATAACAGCAGATGATAGTGAAGGATTCTTGTGGTTCCACCAAACAGCACAGCATAGCCAAGATTCTTCCATGTTCTTCCCACCACTGCCTCATCTCTATCAAAGAATGTGATGGATTTGAATCTTTTCCCTAATTTTGCAACTTGTTTTGAATGATTGTGTGAAGAAAATGGACAAAAGGAATATAATGGTTTAAGTATCATTATCAGTTGGATTAGTTGAATGAATGAATGAAGCTCCATGGCTATGGAGGGTCAATGAAGAACACTTGCAGCCATGGAAATATTTTATTGTTATTATGATTTGATGAATTATGTGGATGAGTATTATTATAATCAAGGGAGACAAACCAGCTCATTTAGGTACCCACTTCCTAAATAATAGACCTCCTTAT

mRNA sequence

TACCACCAGGTGGAGGGAGCATGAAAACAAACCAGAGGCTAAAGAGGGATAAAGATAATGGATGTTCGTTCACTCTCAAACGCCACCTCCACCACTTCCTCCGCCGTCTTCGCGCCACCTCGCCGTCGTCACCACCATTCTCACCCTTCTTCCGCCCTAATTGTTTTCTCATTGAAGCGTCCGCCTCCGCCGCCGCCGCCGTCTCGTTCCGATTCAGACGATTCCTCCGGCTCAACCACCTCAATCTCTGGCCGAATTCGTCGCCCACAAATCCTAAAAACCTCTTCCTCCCCTAAACGCACCACCTCTAAAGTTCCGTCTAATCCTCTCAAGAATCTGGTCGGCTCTGCCAATGCTCCCGTTCTTCCTTTGCCACCGCCGCCTCCTGTTTCCCACTCGCTCGCCGACAAGCTCTGGCTTTCCAGTAAGCTCTCTCCACCGCCTCCTCCGATCACCGAGATGCCAGAGGAAGATGAAAGCGAAAACGAAGAAATTGAAACCGAGGATTCTTCGAGTGAGGGGCGGAGAGAAGTTCAATTCCGCCAAGAGGGTAAGATTTTTGTTGGGAACTTGCCTAATTGGATAAAGAAGCATGAGGTTCAACAGTTTTTTCGGCAGTTTGGTCCTGTCAACAATGTGATATTGATTAAGGGCCACGATACTACGAAAAGAAATGCCGGATACGGATTCGTCATATATGATGGGTCGACTGCAGCTAAGTCGGCCATGAAAGCCGTTGAGTTTGATGGAGTGGAGTTTCACGGAAGGGTTTTGACTGTGAAATTGGATGATGGAAGGAGGTTAAAGGAGAAGGCGTATGAGAGGGCGAAATGGATGGAGGGAGATGACAGTGTGGAGTTTCGTTCACAATGGCATGAAGAGAGGGATAAAGCACGGAAGAGCTTTCGCATGGTTATTGAGACAGAGCCGGAGGATTGGCAGGCGGTTGTCTCAGCCTTCGAGAGGATTAAAAAGCCTTCTAGGAAGGAGTACAGTTTGATGGTGAACTACTATGCAAGAAGAGGTGATATGCATCGTGCACGTGAAACATTTGAAAAGATGCGGGCTAGAGGAATAGAACCCACGACTCATGTCTACACAAACCTTATACATGCTTATGCAGTGGGTAGAGATATGGAAGAAGCATTATCTTGTGTCAGAAAAATGAAAGAGGAAGGCATAGAAATGAGTTTGGTAACTTACAGCATTCTTGTGGGTGGATTTGCCAAAATGGGAAATGCAGAAGCTGCAGATCACTGGTTTCAGGAGGCGAAAGAGAAACACACGTTGAATGCCATCATTTATGGGAATATTATATATGCTTACTGTCAAATATGCAATATGGATAGAGCGGAAGCTTTGGTGAGGCAAATGGAAGAAGAAGGCATAGATGCTCCAATTGACATATATCACACCATGATGGATGGTTATACAATGGTTGGAGATGAGGAGAAATGTCTGCTTGTGTTCGAGAGATTTAAGGAATGTGGTTTGAATCCTTCTGTCATTACATATGGGTGTCTTATTAATCTTTACACAAAGCTCGGGAAAGTTTCTAAAGCTCTGGAAGTTAGCAAAGAAATGGAGCATGCTGGCATAAAACACAACATGAAGACCTACTCCATGTTGATCAATGGGTTCTTGAAGTTGAAAGATTGGGCTAATGCTTTCGCTATTTTTGAGGATTTGATCAAAGACGGTATTAAGCCTGATGTAGTACTCTATAATAATATCATCACAGCATTCTGTGGGATGGGGAAGATGGATCGTGCTGTTTGTACTGTCAAGGAAATGCAAAAACAAAGGCATAGGCCCACAACTCGAACATTTATGCCCATCATACATGGTTTTGCTAGGCAAGGGGACATGAGGAAAGCGCTAGATGTATTCGATATGATGCGGATGTCTGGATGCATTCCAACGGTGCACACTTACAATGCTCTGATTCTTGGTCTAGTTGAGAAGCGTAAGATGGACAAGGCTGTAGAAATACTTGACGAGATGACGTTGGCTGGCGTAAGTCCAAATGAACACACATACACAACCATCATGCATGGTTATGCTTCTTTGGGGGATACCGGAAAAGCGTTCGCTTACTTCACTAAACTGAGGGATGAGGGTCTGAAGCTTGATGTTTATACATATGAAGCATTGCTTAAAGCATGCTGCAAATCAGGGAGGATGCAGAGCGCATTGGCAGTCACCAAGGAAATGAGTGCTCAAAATATCCCAAGAAACACCTTTATTTATAACATTTTAATTGATGGATGGGCTCGACGTGGCGATGTTTGGGAGGCGGCTGATCTAATACAACAAATGAAAAAAGAAGGGGTTCAACCTGACATTCATACCTACACATCCTTCATAAATGCTTGCTCCAAGGCTGGAGATATGCAGAGAGCAACAAAAACAATTGTAGAAATGAAATCAGCAGGAGTGAAGCCTAACGTTAAGACGTATACTACGCTAATTCACGGTTGGGCCCGTGCTTCTTTACCCGAGAAGGCATTGTCATGCTTTGCAGAGATGAAGATATCCGGGTTGAAGCCAGACAAAGCTGTTTACCATTGTCTAATGACGTCATTACTCTCGAGGGCTACCGTTGCAGAAGGAAGCATATATCCCGGCATTCTCTCCATCTGCAAAGAGATGGTCGATTCGGGATTAACCGTGGATATGGGGACAGCAGTTCACTGGTCCAAGTGCTTGCGCAAAATCGAGAGAACAGGTGGGGAGATAACTGAAGCCTTGCAGAAGACCTTCCCTCCCAATTGGAACTCATATAACAATGTCCACATGAGCTCCAGCCTAGACTCGGACGACGAATCTGGTATAAGTGACGATGAGGACGAAGACGATGATATATGTCAAGAGGAAGTATCCAACGCTCGGGACGACGATGTAGTTGGTAGATCATGGTTTTGAGTACACAAAAGCATAGAAACAAGCCTTTTAAGCATGCAAACAGAATCTCACTGCTAAAATGAATGAACGGACGAGATCGATTTGGAAGTCGAAGTCGATGTGACACTGCCAAATTTAAAATATAACAGCAGATGATAGTGAAGGATTCTTGTGGTTCCACCAAACAGCACAGCATAGCCAAGATTCTTCCATGTTCTTCCCACCACTGCCTCATCTCTATCAAAGAATGTGATGGATTTGAATCTTTTCCCTAATTTTGCAACTTGTTTTGAATGATTGTGTGAAGAAAATGGACAAAAGGAATATAATGGTTTAAGTATCATTATCAGTTGGATTAGTTGAATGAATGAATGAAGCTCCATGGCTATGGAGGGTCAATGAAGAACACTTGCAGCCATGGAAATATTTTATTGTTATTATGATTTGATGAATTATGTGGATGAGTATTATTATAATCAAGGGAGACAAACCAGCTCATTTAGGTACCCACTTCCTAAATAATAGACCTCCTTAT

Coding sequence (CDS)

ATGGATGTTCGTTCACTCTCAAACGCCACCTCCACCACTTCCTCCGCCGTCTTCGCGCCACCTCGCCGTCGTCACCACCATTCTCACCCTTCTTCCGCCCTAATTGTTTTCTCATTGAAGCGTCCGCCTCCGCCGCCGCCGCCGTCTCGTTCCGATTCAGACGATTCCTCCGGCTCAACCACCTCAATCTCTGGCCGAATTCGTCGCCCACAAATCCTAAAAACCTCTTCCTCCCCTAAACGCACCACCTCTAAAGTTCCGTCTAATCCTCTCAAGAATCTGGTCGGCTCTGCCAATGCTCCCGTTCTTCCTTTGCCACCGCCGCCTCCTGTTTCCCACTCGCTCGCCGACAAGCTCTGGCTTTCCAGTAAGCTCTCTCCACCGCCTCCTCCGATCACCGAGATGCCAGAGGAAGATGAAAGCGAAAACGAAGAAATTGAAACCGAGGATTCTTCGAGTGAGGGGCGGAGAGAAGTTCAATTCCGCCAAGAGGGTAAGATTTTTGTTGGGAACTTGCCTAATTGGATAAAGAAGCATGAGGTTCAACAGTTTTTTCGGCAGTTTGGTCCTGTCAACAATGTGATATTGATTAAGGGCCACGATACTACGAAAAGAAATGCCGGATACGGATTCGTCATATATGATGGGTCGACTGCAGCTAAGTCGGCCATGAAAGCCGTTGAGTTTGATGGAGTGGAGTTTCACGGAAGGGTTTTGACTGTGAAATTGGATGATGGAAGGAGGTTAAAGGAGAAGGCGTATGAGAGGGCGAAATGGATGGAGGGAGATGACAGTGTGGAGTTTCGTTCACAATGGCATGAAGAGAGGGATAAAGCACGGAAGAGCTTTCGCATGGTTATTGAGACAGAGCCGGAGGATTGGCAGGCGGTTGTCTCAGCCTTCGAGAGGATTAAAAAGCCTTCTAGGAAGGAGTACAGTTTGATGGTGAACTACTATGCAAGAAGAGGTGATATGCATCGTGCACGTGAAACATTTGAAAAGATGCGGGCTAGAGGAATAGAACCCACGACTCATGTCTACACAAACCTTATACATGCTTATGCAGTGGGTAGAGATATGGAAGAAGCATTATCTTGTGTCAGAAAAATGAAAGAGGAAGGCATAGAAATGAGTTTGGTAACTTACAGCATTCTTGTGGGTGGATTTGCCAAAATGGGAAATGCAGAAGCTGCAGATCACTGGTTTCAGGAGGCGAAAGAGAAACACACGTTGAATGCCATCATTTATGGGAATATTATATATGCTTACTGTCAAATATGCAATATGGATAGAGCGGAAGCTTTGGTGAGGCAAATGGAAGAAGAAGGCATAGATGCTCCAATTGACATATATCACACCATGATGGATGGTTATACAATGGTTGGAGATGAGGAGAAATGTCTGCTTGTGTTCGAGAGATTTAAGGAATGTGGTTTGAATCCTTCTGTCATTACATATGGGTGTCTTATTAATCTTTACACAAAGCTCGGGAAAGTTTCTAAAGCTCTGGAAGTTAGCAAAGAAATGGAGCATGCTGGCATAAAACACAACATGAAGACCTACTCCATGTTGATCAATGGGTTCTTGAAGTTGAAAGATTGGGCTAATGCTTTCGCTATTTTTGAGGATTTGATCAAAGACGGTATTAAGCCTGATGTAGTACTCTATAATAATATCATCACAGCATTCTGTGGGATGGGGAAGATGGATCGTGCTGTTTGTACTGTCAAGGAAATGCAAAAACAAAGGCATAGGCCCACAACTCGAACATTTATGCCCATCATACATGGTTTTGCTAGGCAAGGGGACATGAGGAAAGCGCTAGATGTATTCGATATGATGCGGATGTCTGGATGCATTCCAACGGTGCACACTTACAATGCTCTGATTCTTGGTCTAGTTGAGAAGCGTAAGATGGACAAGGCTGTAGAAATACTTGACGAGATGACGTTGGCTGGCGTAAGTCCAAATGAACACACATACACAACCATCATGCATGGTTATGCTTCTTTGGGGGATACCGGAAAAGCGTTCGCTTACTTCACTAAACTGAGGGATGAGGGTCTGAAGCTTGATGTTTATACATATGAAGCATTGCTTAAAGCATGCTGCAAATCAGGGAGGATGCAGAGCGCATTGGCAGTCACCAAGGAAATGAGTGCTCAAAATATCCCAAGAAACACCTTTATTTATAACATTTTAATTGATGGATGGGCTCGACGTGGCGATGTTTGGGAGGCGGCTGATCTAATACAACAAATGAAAAAAGAAGGGGTTCAACCTGACATTCATACCTACACATCCTTCATAAATGCTTGCTCCAAGGCTGGAGATATGCAGAGAGCAACAAAAACAATTGTAGAAATGAAATCAGCAGGAGTGAAGCCTAACGTTAAGACGTATACTACGCTAATTCACGGTTGGGCCCGTGCTTCTTTACCCGAGAAGGCATTGTCATGCTTTGCAGAGATGAAGATATCCGGGTTGAAGCCAGACAAAGCTGTTTACCATTGTCTAATGACGTCATTACTCTCGAGGGCTACCGTTGCAGAAGGAAGCATATATCCCGGCATTCTCTCCATCTGCAAAGAGATGGTCGATTCGGGATTAACCGTGGATATGGGGACAGCAGTTCACTGGTCCAAGTGCTTGCGCAAAATCGAGAGAACAGGTGGGGAGATAACTGAAGCCTTGCAGAAGACCTTCCCTCCCAATTGGAACTCATATAACAATGTCCACATGAGCTCCAGCCTAGACTCGGACGACGAATCTGGTATAAGTGACGATGAGGACGAAGACGATGATATATGTCAAGAGGAAGTATCCAACGCTCGGGACGACGATGTAGTTGGTAGATCATGGTTTTGA

Protein sequence

MDVRSLSNATSTTSSAVFAPPRRRHHHSHPSSALIVFSLKRPPPPPPPSRSDSDDSSGSTTSISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANAPVLPLPPPPPVSHSLADKLWLSSKLSPPPPPITEMPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWIKKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHGRVLTVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKSFRMVIETEPEDWQAVVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHTLNAIIYGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKISGLKPDKAVYHCLMTSLLSRATVAEGSIYPGILSICKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEALQKTFPPNWNSYNNVHMSSSLDSDDESGISDDEDEDDDICQEEVSNARDDDVVGRSWF

Homology

[Close]

BLAST of Cp4.1LG09g03750 vs. ExPASy Swiss-Prot
Match: Q0WMY5 (Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPR4 PE=1 SV=1)

HSP 1 Score: 1256.5 bits (3250), Expect = 0.0e+00
Identity = 634/932 (68.03%), Postives = 762/932 (81.76%), Query Frame = 0


Query: 29  HPSSALIVFSLKRPPP-PPPPSRSDSDDSSGSTTSISGRIRRPQILKTSSSPKRTTSKVP 88
           H   A I FSLK+PPP PP P  S  D            +RRP+    SSS   + S +P
Sbjct: 25  HSPVASISFSLKQPPPQPPEPPESPPD------------LRRPEKSIGSSSSSSSPSPIP 84

Query: 89  S-------NPLKNLVG-SANAPVLPLPPPPPVS---HSLADKLWLSSKLSPPPPPITEMP 148
           S       NPLK L   S+ +P++       VS    SLA KL LSSKLSPPPPP    P
Sbjct: 85  SPKTPLKINPLKGLTNRSSVSPLVQSEVSSKVSSFGSSLASKLRLSSKLSPPPPPPPPPP 144

Query: 149 EEDESENEE---IETEDSSSEGRR-EVQFRQEGKIFVGNLPNWIKKHEVQQFFRQFGPVN 208
            E+ ++  +    +T+    E R  + +FRQEGKIFVGNLP WIKK E ++FFRQFGP+ 
Sbjct: 145 VEETTQFRDEFRSDTKPPEEETRNPQQEFRQEGKIFVGNLPTWIKKPEFEEFFRQFGPIE 204

Query: 209 NVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHGRVLTVKLDDGRRLKEK 268
           NVILIKGH   ++NAG+GF+IY    A KSAMKAVEFDGVEFHGR+LTVKLDDG+RLK K
Sbjct: 205 NVILIKGHHEVEKNAGFGFIIY---AAEKSAMKAVEFDGVEFHGRILTVKLDDGKRLKTK 264

Query: 269 AYERAKWM---EGDDSVEFRSQWHEERDKARKSFRMVIETEPEDWQAVVSAFERIKKPSR 328
           A +R +W+   E D  +  +S WH+ER+ +RKS + +++T  ++WQAV+SAFE+I KPSR
Sbjct: 265 AEQRVRWVEEGEEDTKMSNKSSWHQEREGSRKSLQRILDTNGDNWQAVISAFEKISKPSR 324

Query: 329 KEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDMEEALSCVRK 388
            E+ LMV +Y RRGDMHRARETFE+MRARGI PT+ +YT+LIHAYAVGRDM+EALSCVRK
Sbjct: 325 TEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRK 384

Query: 389 MKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKH-TLNAIIYGNIIYAYCQICN 448
           MKEEGIEMSLVTYS++VGGF+K G+AEAAD+WF EAK  H TLNA IYG IIYA+CQ CN
Sbjct: 385 MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCN 444

Query: 449 MDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKECGLNPSVITYGC 508
           M+RAEALVR+MEEEGIDAPI IYHTMMDGYTMV DE+K L+VF+R KECG  P+V+TYGC
Sbjct: 445 MERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGC 504

Query: 509 LINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDG 568
           LINLYTK+GK+SKALEVS+ M+  G+KHN+KTYSM+INGF+KLKDWANAFA+FED++K+G
Sbjct: 505 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 564

Query: 569 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFARQGDMRKAL 628
           +KPDV+LYNNII+AFCGMG MDRA+ TVKEMQK RHRPTTRTFMPIIHG+A+ GDMR++L
Sbjct: 565 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 624

Query: 629 DVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVSPNEHTYTTIMHGY 688
           +VFDMMR  GC+PTVHT+N LI GLVEKR+M+KAVEILDEMTLAGVS NEHTYT IM GY
Sbjct: 625 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 684

Query: 689 ASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNT 748
           AS+GDTGKAF YFT+L++EGL +D++TYEALLKACCKSGRMQSALAVTKEMSA+NIPRN+
Sbjct: 685 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 744

Query: 749 FIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQRATKTIVE 808
           F+YNILIDGWARRGDVWEAADLIQQMKKEGV+PDIHTYTSFI+ACSKAGDM RAT+TI E
Sbjct: 745 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 804

Query: 809 MKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKISGLKPDKAVYHCLMTSLLSRAT 868
           M++ GVKPN+KTYTTLI GWARASLPEKALSC+ EMK  G+KPDKAVYHCL+TSLLSRA+
Sbjct: 805 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 864

Query: 869 VAEGSIYPGILSICKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEALQKTFPPNWNS 928
           +AE  IY G+++ICKEMV++GL VDMGTAVHWSKCL KIE +GGE+TE LQKTFPP+W+S
Sbjct: 865 IAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTETLQKTFPPDWSS 924

Query: 929 YNNVH----MSSSLDSDDESGISDDEDEDDDI 937
           +++ H      S +DSD++    +D ++D+D+
Sbjct: 925 HHHHHGFLDQVSDVDSDEDDVDGEDGEDDEDV 941

[Close]

BLAST of Cp4.1LG09g03750 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 5.4e-64
Identity = 147/536 (27.43%), Postives = 263/536 (49.07%), Query Frame = 0


Query: 342 PTTHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGN-AEAADH 401
           PT   ++ L  A A  +  +  L+  ++M+ +GI  +L T SI++  F +      A   
Sbjct: 86  PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145

Query: 402 WFQEAKEKHTLNAIIYGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTM 461
             +  K  +  N I +  +I   C    +  A  LV +M E G    +   +T+++G  +
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205

Query: 462 VGDEEKCLLVFERFKECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKT 521
            G E + +L+ ++  E G  P+ +TYG ++N+  K G+ + A+E+ ++ME   IK +   
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265

Query: 522 YSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQ 581
           YS++I+G  K     NAF +F ++   GI  +++ YN +I  FC  G+ D     +++M 
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325

Query: 582 KQRHRPTTRTFMPIIHGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMD 641
           K++  P   TF  +I  F ++G +R+A ++   M   G  P   TY +LI G  ++  +D
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385

Query: 642 KAVEILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALL 701
           KA +++D M   G  PN  T+  +++GY            F K+   G+  D  TY  L+
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445

Query: 702 KACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQ 761
           +  C+ G++  A  + +EM ++ +P N   Y IL+DG    G+  +A ++ ++++K  ++
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505

Query: 762 PDIHTYTSFINACSKAGDMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSC 821
            DI  Y   I+    A  +  A      +   GVKP VKTY  +I G  +     +A   
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565

Query: 822 FAEMKISGLKPDKAVYHCLMTSLLSRATVAEGSIYPGILSICKEMVDSGLTVDMGT 877
           F +M+  G  PD   Y     ++L RA + +G     +  + +E+   G +VD  T
Sbjct: 566 FRKMEEDGHAPDGWTY-----NILIRAHLGDGDATKSV-KLIEELKRCGFSVDAST 615

[Close]

BLAST of Cp4.1LG09g03750 vs. ExPASy Swiss-Prot
Match: Q9FMQ1 (Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g12100 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 3.5e-63
Identity = 157/571 (27.50%), Postives = 266/571 (46.58%), Query Frame = 0


Query: 307 PSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDMEEALSC 366
           PS    +L++++  +          F  +      P+  +Y   I A     D+ + L  
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 201

Query: 367 VRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHTLNAII-YGNIIYAYCQ 426
             +MK + I  S+  Y++L+ G  K      A+  F E   +  L ++I Y  +I  YC+
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261

Query: 427 ICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKECGLNPSVIT 486
             N +++  +  +M+ + I+  +  ++T++ G    G  E    V +  K+ G  P   T
Sbjct: 262 AGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT 321

Query: 487 YGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLI 546
           +  L + Y+   K   AL V +    +G+K N  T S+L+N   K      A  I    +
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381

Query: 547 KDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFARQGDMR 606
             G+ P+ V+YN +I  +C  G +  A   ++ M+KQ  +P    +  +I  F   G+M 
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441

Query: 607 KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVSPNEHTYTTIM 666
            A    + M++ G  P+V TYN LI G   K + DK  +IL EM   G  PN  +Y T++
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501

Query: 667 HGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIP 726
           +         +A      + D G+   V  Y  L+  CC  G+++ A   +KEM  + I 
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561

Query: 727 RNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQRATKT 786
            N   YN LIDG +  G + EA DL+ ++ ++G++PD+ TY S I+    AG++QR    
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621

Query: 787 IVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKISGLKPDKAVYHCLMTSLLS 846
             EMK +G+KP +KTY  LI    +  + E     F EM    LKPD  VY+ ++     
Sbjct: 622 YEEMKRSGIKPTLKTYHLLISLCTKEGI-ELTERLFGEM---SLKPDLLVYNGVLHCYAV 681

Query: 847 RATVAEGSIYPGILSICKEMVDSGLTVDMGT 877
              + +        ++ K+M++  + +D  T
Sbjct: 682 HGDMEKA------FNLQKQMIEKSIGLDKTT 702

[Close]

BLAST of Cp4.1LG09g03750 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 6.0e-63
Identity = 139/499 (27.86%), Postives = 247/499 (49.50%), Query Frame = 0


Query: 312 YSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDMEEALSCVRKMK 371
           YS+ +N + RR  +  A     KM   G EP     ++L++ Y   + + +A++ V +M 
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180

Query: 372 EEGIEMSLVTYSILVGG-FAKMGNAEAADHWFQEAKEKHTLNAIIYGNIIYAYCQICNMD 431
           E G +    T++ L+ G F     +EA     Q  +     + + YG ++   C+  ++D
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240

Query: 432 RAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKECGLNPSVITYGCLI 491
            A +L+++ME+  I+A + IY+T++DG       +  L +F      G+ P V TY  LI
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300

Query: 492 NLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIK 551
           +     G+ S A  +  +M    I  N+ T+S LI+ F+K      A  +++++IK  I 
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 552 PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFARQGDMRKALDV 611
           PD+  Y+++I  FC   ++D A    + M  +   P   T+  +I GF +   + + +++
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420

Query: 612 FDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVSPNEHTYTTIMHGYAS 671
           F  M   G +    TY  LI G  + R  D A  +  +M   GV PN  TY  ++ G   
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480

Query: 672 LGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFI 731
            G   KA   F  L+   ++ D+YTY  +++  CK+G+++    +   +S + +  N   
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540

Query: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQRATKTIVEMK 791
           YN +I G+ R+G   EA  L+++MK++G  P+  TY + I A  + GD + + + I EM+
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600

Query: 792 SAGVKPNVKT---YTTLIH 807
           S G   +  T    T ++H
Sbjct: 601 SCGFAGDASTIGLVTNMLH 619

[Close]

BLAST of Cp4.1LG09g03750 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 3.3e-61
Identity = 141/539 (26.16%), Postives = 261/539 (48.42%), Query Frame = 0


Query: 342 PTTHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHW 401
           PT   +  L  A A  +  E  L+  ++M+ +GI  S+ T SI++  F +      A   
Sbjct: 86  PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145

Query: 402 FQE-AKEKHTLNAIIYGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTM 461
             +  K  +  + +I+  ++   C  C +  A  LV +M E G    +   +T+++G  +
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205

Query: 462 VGDEEKCLLVFERFKECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKT 521
            G     +++ +R  E G  P+ +TYG ++N+  K G+ + A+E+ ++ME   IK +   
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265

Query: 522 YSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQ 581
           YS++I+G  K     NAF +F ++   G K D++ YN +I  FC  G+ D     +++M 
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325

Query: 582 KQRHRPTTRTFMPIIHGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMD 641
           K++  P   TF  +I  F ++G +R+A  +   M   G  P   TYN+LI G  ++ +++
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385

Query: 642 KAVEILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALL 701
           +A++++D M   G  P+  T+  +++GY            F ++   G+  +  TY  L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445

Query: 702 KACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQ 761
           +  C+SG+++ A  + +EM ++ +  +   Y IL+DG    G++ +A ++  +++K  ++
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505

Query: 762 PDIHTYTSFINACSKAGDMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSC 821
            DI  Y   I+    A  +  A      +   GVK + + Y  +I    R     KA   
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565

Query: 822 FAEMKISGLKPDKAVYHCLMTSLL---SRATVAEGSIYPGILSICKEMVDSGLTVDMGT 877
           F +M   G  PD+  Y+ L+ + L      T AE         + +EM  SG   D+ T
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAE---------LIEEMKSSGFPADVST 615

[Close]

BLAST of Cp4.1LG09g03750 vs. NCBI nr
Match: XP_023541364.1 (pentatricopeptide repeat-containing protein At5g04810, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1906 bits (4937), Expect = 0.0
Identity = 955/955 (100.00%), Postives = 955/955 (100.00%), Query Frame = 0


Query: 1   MDVRSLSNATSTTSSAVFAPPRRRHHHSHPSSALIVFSLKRPPPPPPPSRSDSDDSSGST 60
           MDVRSLSNATSTTSSAVFAPPRRRHHHSHPSSALIVFSLKRPPPPPPPSRSDSDDSSGST
Sbjct: 1   MDVRSLSNATSTTSSAVFAPPRRRHHHSHPSSALIVFSLKRPPPPPPPSRSDSDDSSGST 60

Query: 61  TSISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANAPVLPLPPPPPVSHSLADKLW 120
           TSISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANAPVLPLPPPPPVSHSLADKLW
Sbjct: 61  TSISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANAPVLPLPPPPPVSHSLADKLW 120

Query: 121 LSSKLSPPPPPITEMPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWIKKHE 180
           LSSKLSPPPPPITEMPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWIKKHE
Sbjct: 121 LSSKLSPPPPPITEMPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWIKKHE 180

Query: 181 VQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHGRVLT 240
           VQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHGRVLT
Sbjct: 181 VQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHGRVLT 240

Query: 241 VKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKSFRMVIETEPEDWQAVVSA 300
           VKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKSFRMVIETEPEDWQAVVSA
Sbjct: 241 VKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKSFRMVIETEPEDWQAVVSA 300

Query: 301 FERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDM 360
           FERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDM
Sbjct: 301 FERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDM 360

Query: 361 EEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHTLNAIIYGNII 420
           EEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHTLNAIIYGNII
Sbjct: 361 EEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHTLNAIIYGNII 420

Query: 421 YAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKECGLN 480
           YAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKECGLN
Sbjct: 421 YAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKECGLN 480

Query: 481 PSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAI 540
           PSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAI
Sbjct: 481 PSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAI 540

Query: 541 FEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFAR 600
           FEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFAR
Sbjct: 541 FEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFAR 600

Query: 601 QGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVSPNEHT 660
           QGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVSPNEHT
Sbjct: 601 QGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVSPNEHT 660

Query: 661 YTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMS 720
           YTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMS
Sbjct: 661 YTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMS 720

Query: 721 AQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQ 780
           AQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQ
Sbjct: 721 AQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQ 780

Query: 781 RATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKISGLKPDKAVYHCLM 840
           RATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKISGLKPDKAVYHCLM
Sbjct: 781 RATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKISGLKPDKAVYHCLM 840

Query: 841 TSLLSRATVAEGSIYPGILSICKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEALQK 900
           TSLLSRATVAEGSIYPGILSICKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEALQK
Sbjct: 841 TSLLSRATVAEGSIYPGILSICKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEALQK 900

Query: 901 TFPPNWNSYNNVHMSSSLDSDDESGISDDEDEDDDICQEEVSNARDDDVVGRSWF 955
           TFPPNWNSYNNVHMSSSLDSDDESGISDDEDEDDDICQEEVSNARDDDVVGRSWF
Sbjct: 901 TFPPNWNSYNNVHMSSSLDSDDESGISDDEDEDDDICQEEVSNARDDDVVGRSWF 955

[Close]

BLAST of Cp4.1LG09g03750 vs. NCBI nr
Match: XP_022945086.1 (pentatricopeptide repeat-containing protein At5g04810, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1871 bits (4847), Expect = 0.0
Identity = 936/959 (97.60%), Postives = 947/959 (98.75%), Query Frame = 0


Query: 1   MDVRSLSNATSTTSSAVFAPPRRRHHHSHPSSALIVFSLKRPPPPPPPSRSDSDDSSGST 60
           MDVRSLSNATSTTSSAVF PPRRRHHHSHPSSALIV SLKRPPPPPPPSRSDSDDSSGST
Sbjct: 1   MDVRSLSNATSTTSSAVFPPPRRRHHHSHPSSALIVISLKRPPPPPPPSRSDSDDSSGST 60

Query: 61  TSISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANAPVLPLPPPPP----VSHSLA 120
            SISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSAN PVLPLPPPPP    VSHSL 
Sbjct: 61  ASISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANVPVLPLPPPPPPPLPVSHSLG 120

Query: 121 DKLWLSSKLSPPPPPITEMPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWI 180
           DKLWLSSKLSPPPPPITE+PEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWI
Sbjct: 121 DKLWLSSKLSPPPPPITEIPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWI 180

Query: 181 KKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHG 240
           KKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHG
Sbjct: 181 KKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHG 240

Query: 241 RVLTVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKSFRMVIETEPEDWQA 300
           RVL+VKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARK FRMVIETEPEDWQA
Sbjct: 241 RVLSVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKGFRMVIETEPEDWQA 300

Query: 301 VVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAV 360
           VVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAV
Sbjct: 301 VVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAV 360

Query: 361 GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHTLNAIIY 420
           GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKH+LNAIIY
Sbjct: 361 GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHSLNAIIY 420

Query: 421 GNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKE 480
           GNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDE+KCLLVFERFKE
Sbjct: 421 GNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCLLVFERFKE 480

Query: 481 CGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWAN 540
           CGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWAN
Sbjct: 481 CGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWAN 540

Query: 541 AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIH 600
           AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIH
Sbjct: 541 AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIH 600

Query: 601 GFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVSP 660
           GFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKM+KAVEILDEMTLAGV+P
Sbjct: 601 GFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVNP 660

Query: 661 NEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVT 720
           NEHTYTTIMHGYASLGDTGKAF YFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVT
Sbjct: 661 NEHTYTTIMHGYASLGDTGKAFVYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVT 720

Query: 721 KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKA 780
           KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKA
Sbjct: 721 KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKA 780

Query: 781 GDMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKISGLKPDKAVY 840
           GDMQRATKTIVEMKSAGVKPN+KTYTTLIHGWARASLPEKALSCFAEMK+SGLKPDKAVY
Sbjct: 781 GDMQRATKTIVEMKSAGVKPNIKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKAVY 840

Query: 841 HCLMTSLLSRATVAEGSIYPGILSICKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITE 900
           HCLMTSLLSRATVAEGSIYPGILS+CKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITE
Sbjct: 841 HCLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITE 900

Query: 901 ALQKTFPPNWNSYNNVHMSSSLDSDDESGISDDEDEDDDICQEEVSNARDDDVVGRSWF 955
           ALQKTFPPNWNSYNNVHMSSSLDSDDE GISDDE+EDDDICQEEVS+ARDDDVVGRSWF
Sbjct: 901 ALQKTFPPNWNSYNNVHMSSSLDSDDEYGISDDENEDDDICQEEVSDARDDDVVGRSWF 959

[Close]

BLAST of Cp4.1LG09g03750 vs. NCBI nr
Match: KAG6573890.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1867 bits (4837), Expect = 0.0
Identity = 936/958 (97.70%), Postives = 946/958 (98.75%), Query Frame = 0


Query: 1   MDVRSLSNATSTTSSAVFAPPRRRHHHSHPSSALIVFSLKRPPPPPPPSRSDSDDSSGST 60
           MDVRSLSNATSTTSSAVF P RRRHHHSHPSSALIVFSLKRPPPPPPP RSDSDDSSGST
Sbjct: 1   MDVRSLSNATSTTSSAVFPPSRRRHHHSHPSSALIVFSLKRPPPPPPPPRSDSDDSSGST 60

Query: 61  TSISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANAPVLPLPPPPP---VSHSLAD 120
            SISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANAPVLPLPPPPP   VSHSL D
Sbjct: 61  ASISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANAPVLPLPPPPPPPPVSHSLGD 120

Query: 121 KLWLSSKLSPPPPPITEMPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWIK 180
           KLWLSSKLSPPPPPITE+PEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWIK
Sbjct: 121 KLWLSSKLSPPPPPITEIPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWIK 180

Query: 181 KHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHGR 240
           KHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTA KSAMKAVEFDGVEFHGR
Sbjct: 181 KHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAEKSAMKAVEFDGVEFHGR 240

Query: 241 VLTVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKSFRMVIETEPEDWQAV 300
           VLTVKLDDGRRLKEKAY+RAKWMEGDDSVEFRSQWHEERDKARKSFRMVIETEPEDWQAV
Sbjct: 241 VLTVKLDDGRRLKEKAYQRAKWMEGDDSVEFRSQWHEERDKARKSFRMVIETEPEDWQAV 300

Query: 301 VSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVG 360
           VSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPT+HVYTNLIHAYAVG
Sbjct: 301 VSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTSHVYTNLIHAYAVG 360

Query: 361 RDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHTLNAIIYG 420
           RDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKH+LNAIIYG
Sbjct: 361 RDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHSLNAIIYG 420

Query: 421 NIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKEC 480
           NIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDE+KCLLVFERFKEC
Sbjct: 421 NIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCLLVFERFKEC 480

Query: 481 GLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANA 540
           GLNPSVITYGCLINLYTKLGKVSKALEVSKEMEH GIKHNMKTYSMLINGFLKLKDWANA
Sbjct: 481 GLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHVGIKHNMKTYSMLINGFLKLKDWANA 540

Query: 541 FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHG 600
           FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHG
Sbjct: 541 FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHG 600

Query: 601 FARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVSPN 660
           FARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKM+KAVEILDEMTLAGVSPN
Sbjct: 601 FARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVSPN 660

Query: 661 EHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTK 720
           EHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTK
Sbjct: 661 EHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTK 720

Query: 721 EMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAG 780
           EMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAG
Sbjct: 721 EMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAG 780

Query: 781 DMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKISGLKPDKAVYH 840
           DMQRATKTIVEMKSA VKPNVKTYTTLIHGWARASLPEKALSCFAEMK+SGLKPDKAVYH
Sbjct: 781 DMQRATKTIVEMKSARVKPNVKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKAVYH 840

Query: 841 CLMTSLLSRATVAEGSIYPGILSICKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEA 900
           CLMTSLLSRATVAEGSIYPGILS+CKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEA
Sbjct: 841 CLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEA 900

Query: 901 LQKTFPPNWNSYNNVHMSSSLDSDDESGISDDEDEDDDICQEEVSNARDDDVVGRSWF 955
           LQKTFPPNWNSYNNVHMSSSLDSDDE GISDDE+EDDDICQEEVS+ARDDDVVGRSWF
Sbjct: 901 LQKTFPPNWNSYNNVHMSSSLDSDDEYGISDDENEDDDICQEEVSDARDDDVVGRSWF 958

[Close]

BLAST of Cp4.1LG09g03750 vs. NCBI nr
Match: XP_022968336.1 (pentatricopeptide repeat-containing protein At5g04810, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1840 bits (4765), Expect = 0.0
Identity = 929/964 (96.37%), Postives = 940/964 (97.51%), Query Frame = 0


Query: 1   MDVRSLSNATSTTSSAVFAPPRRRHHHSHPSSALIVFSLKRPPPPPPPSRSDSDDSSGST 60
           MDVRSLSNATSTTSSAVFAPPRRRHHHSHPSS LIVFSLKRPPPPPPP RSDSDDSSGST
Sbjct: 1   MDVRSLSNATSTTSSAVFAPPRRRHHHSHPSSTLIVFSLKRPPPPPPP-RSDSDDSSGST 60

Query: 61  TSISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANAPVLPLPPPPP---VSHSLAD 120
            SIS RIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSAN PV PLPPPPP   VSHS+AD
Sbjct: 61  ASISSRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANVPVFPLPPPPPPPPVSHSVAD 120

Query: 121 KLWLSSKLSPPPPPITEMPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWIK 180
           KLWLSSKLSP PPPITE+PEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWIK
Sbjct: 121 KLWLSSKLSPLPPPITEIPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWIK 180

Query: 181 KHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHGR 240
           KHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHGR
Sbjct: 181 KHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHGR 240

Query: 241 VLTVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKSFRMVIETEPEDWQAV 300
           VLTVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARK  RMVIETEP DWQAV
Sbjct: 241 VLTVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKGLRMVIETEPGDWQAV 300

Query: 301 VSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVG 360
           VSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPT+HVYTNLIHAYAVG
Sbjct: 301 VSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTSHVYTNLIHAYAVG 360

Query: 361 RDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHTLNAIIYG 420
           RDMEEALSCVRKMKEEGIEMSLVTYSI+VGGFAKMGNAEAADHWFQEAKEKH+LNAIIYG
Sbjct: 361 RDMEEALSCVRKMKEEGIEMSLVTYSIVVGGFAKMGNAEAADHWFQEAKEKHSLNAIIYG 420

Query: 421 NIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKEC 480
           NIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKEC
Sbjct: 421 NIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKEC 480

Query: 481 GLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANA 540
           GLNPSV+TYGCLINLYTKLGKVSKALEV KEME+AGIKHNMKTYSMLINGFLKLKDWANA
Sbjct: 481 GLNPSVVTYGCLINLYTKLGKVSKALEVCKEMENAGIKHNMKTYSMLINGFLKLKDWANA 540

Query: 541 FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHG 600
           FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHG
Sbjct: 541 FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHG 600

Query: 601 FARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVSPN 660
           FARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKM+KAVEILDEMTLAGVSPN
Sbjct: 601 FARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVSPN 660

Query: 661 EHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTK 720
           EHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTK
Sbjct: 661 EHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTK 720

Query: 721 EMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAG 780
           EMSAQNIPRN FIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAG
Sbjct: 721 EMSAQNIPRNAFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAG 780

Query: 781 DMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKISGLKPDKAVYH 840
           DMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMK+SGLKPDKAVYH
Sbjct: 781 DMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKAVYH 840

Query: 841 CLMTSLLSRATVAEGSIYPGILSICKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEA 900
           CLMTSLLSRATVAEGSIYPGILS+CKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEA
Sbjct: 841 CLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEA 900

Query: 901 LQKTFPPNWNSYNNVHMSSSLDSDDESGISDDEDED------DDICQEEVSNARDDDVVG 955
           LQKTFPPNWNSYNNVHMSSSLDSDDESGISDDEDED      DD CQE VS+ARDD VVG
Sbjct: 901 LQKTFPPNWNSYNNVHMSSSLDSDDESGISDDEDEDEDEDKDDDTCQEGVSDARDD-VVG 960

[Close]

BLAST of Cp4.1LG09g03750 vs. NCBI nr
Match: KAA0034647.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK09199.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1695 bits (4390), Expect = 0.0
Identity = 856/966 (88.61%), Postives = 906/966 (93.79%), Query Frame = 0


Query: 1   MDVRSLSNATSTTSSAVFAPPRRRHHH--SHPSSALIVFSLKRPPPPPPPSRSDSDDSSG 60
           MDVRSLSNAT+TTSS VF+  RRRHHH  SHP  A+I+FSLK P PP PP RSDSDDSS 
Sbjct: 1   MDVRSLSNATTTTSSTVFSSHRRRHHHHYSHPPPAVILFSLKPPSPPTPP-RSDSDDSSS 60

Query: 61  STTSISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANAPVLPLPPPPP--VSHSLA 120
           S+ S+SGRIRRPQ LKT+SSPKRT+S+VPSNPL+NLVGSA  P+LP PPPPP  VSHSL+
Sbjct: 61  SSPSLSGRIRRPQTLKTTSSPKRTSSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLS 120

Query: 121 DKLWLSSKLSPPPPPITEMPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWI 180
           +KLWLSSKLSPPPPPI+E+ EED++E EEIETE+SSS+GRREVQFRQEGK+FVGNLPNWI
Sbjct: 121 EKLWLSSKLSPPPPPISELLEEDQNEIEEIETENSSSKGRREVQFRQEGKVFVGNLPNWI 180

Query: 181 KKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHG 240
           KKHEVQ+FFRQFGPV NVILIKGH+ T+RNAGYGF+IYDG TAAKSA+KAVEFDGVEFHG
Sbjct: 181 KKHEVQEFFRQFGPVKNVILIKGHNATERNAGYGFIIYDGPTAAKSAIKAVEFDGVEFHG 240

Query: 241 RVLTVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKSFRMVIETEPEDWQA 300
           RVLTVKLDDGRRLKEK  ERA+WMEGDDSVE+RS WHEERDKAR  FR VIETEPE+WQA
Sbjct: 241 RVLTVKLDDGRRLKEKTNERARWMEGDDSVEYRSHWHEERDKARNGFRKVIETEPENWQA 300

Query: 301 VVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAV 360
           VVSAF+RIKKPSRKEY LMVNYYARRGDMHRARETFEKMRARGIEP++HVYTNLIHAYAV
Sbjct: 301 VVSAFDRIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAV 360

Query: 361 GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHT-LNAII 420
           GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAE+ADHWFQEAKEKH+ +NAII
Sbjct: 361 GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAESADHWFQEAKEKHSSMNAII 420

Query: 421 YGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFK 480
           YGNIIYAYCQ CNMDRAEALVR+MEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFK
Sbjct: 421 YGNIIYAYCQRCNMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFK 480

Query: 481 ECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWA 540
           ECGLNPSVITYGCLINLY KLGKVSKALEVSKEMEHAGIKHNMKT+SMLINGFLKLKDWA
Sbjct: 481 ECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTFSMLINGFLKLKDWA 540

Query: 541 NAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPII 600
           NAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRH+PTTRTFMPII
Sbjct: 541 NAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPII 600

Query: 601 HGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVS 660
           HGFAR+G+M+KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKM+KA +ILDEMTLAGVS
Sbjct: 601 HGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVS 660

Query: 661 PNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAV 720
           PNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGL LDVYTYEALLKACCKSGRMQSALAV
Sbjct: 661 PNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLGLDVYTYEALLKACCKSGRMQSALAV 720

Query: 721 TKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSK 780
           TKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADL+QQMK+EGVQPDIHTYTSFINACSK
Sbjct: 721 TKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSK 780

Query: 781 AGDMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKISGLKPDKAV 840
           AGDMQRATKTI EMKS GVKPNVKTYTTLIHGWARASLPEKALSCF EMK+SGLKPDKAV
Sbjct: 781 AGDMQRATKTIEEMKSVGVKPNVKTYTTLIHGWARASLPEKALSCFEEMKLSGLKPDKAV 840

Query: 841 YHCLMTSLLSRATVAEGSIYPGILSICKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEIT 900
           YHCLMTSLLSRATVA+G IYPGILS+C+EMVD  LTVDMGTAVHWSKCL KIERTGGEIT
Sbjct: 841 YHCLMTSLLSRATVAQGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEIT 900

Query: 901 EALQKTFPPNWNSYNNVHMSSSLDSDDESGISDDEDEDDDICQEEVS-NARDD-----DV 955
           EALQKTFPPNWN YNN   SS++DSDDES ISDDED  DDICQ   S NA DD     DV
Sbjct: 901 EALQKTFPPNWNLYNNTLTSSNIDSDDESDISDDED--DDICQGGASSNAGDDGESDGDV 960

[Close]

BLAST of Cp4.1LG09g03750 vs. ExPASy TrEMBL
Match: A0A6J1FZV7 (pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449427 PE=3 SV=1)

HSP 1 Score: 1871 bits (4847), Expect = 0.0
Identity = 936/959 (97.60%), Postives = 947/959 (98.75%), Query Frame = 0


Query: 1   MDVRSLSNATSTTSSAVFAPPRRRHHHSHPSSALIVFSLKRPPPPPPPSRSDSDDSSGST 60
           MDVRSLSNATSTTSSAVF PPRRRHHHSHPSSALIV SLKRPPPPPPPSRSDSDDSSGST
Sbjct: 1   MDVRSLSNATSTTSSAVFPPPRRRHHHSHPSSALIVISLKRPPPPPPPSRSDSDDSSGST 60

Query: 61  TSISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANAPVLPLPPPPP----VSHSLA 120
            SISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSAN PVLPLPPPPP    VSHSL 
Sbjct: 61  ASISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANVPVLPLPPPPPPPLPVSHSLG 120

Query: 121 DKLWLSSKLSPPPPPITEMPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWI 180
           DKLWLSSKLSPPPPPITE+PEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWI
Sbjct: 121 DKLWLSSKLSPPPPPITEIPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWI 180

Query: 181 KKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHG 240
           KKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHG
Sbjct: 181 KKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHG 240

Query: 241 RVLTVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKSFRMVIETEPEDWQA 300
           RVL+VKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARK FRMVIETEPEDWQA
Sbjct: 241 RVLSVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKGFRMVIETEPEDWQA 300

Query: 301 VVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAV 360
           VVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAV
Sbjct: 301 VVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAV 360

Query: 361 GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHTLNAIIY 420
           GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKH+LNAIIY
Sbjct: 361 GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHSLNAIIY 420

Query: 421 GNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKE 480
           GNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDE+KCLLVFERFKE
Sbjct: 421 GNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCLLVFERFKE 480

Query: 481 CGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWAN 540
           CGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWAN
Sbjct: 481 CGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWAN 540

Query: 541 AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIH 600
           AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIH
Sbjct: 541 AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIH 600

Query: 601 GFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVSP 660
           GFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKM+KAVEILDEMTLAGV+P
Sbjct: 601 GFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVNP 660

Query: 661 NEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVT 720
           NEHTYTTIMHGYASLGDTGKAF YFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVT
Sbjct: 661 NEHTYTTIMHGYASLGDTGKAFVYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVT 720

Query: 721 KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKA 780
           KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKA
Sbjct: 721 KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKA 780

Query: 781 GDMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKISGLKPDKAVY 840
           GDMQRATKTIVEMKSAGVKPN+KTYTTLIHGWARASLPEKALSCFAEMK+SGLKPDKAVY
Sbjct: 781 GDMQRATKTIVEMKSAGVKPNIKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKAVY 840

Query: 841 HCLMTSLLSRATVAEGSIYPGILSICKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITE 900
           HCLMTSLLSRATVAEGSIYPGILS+CKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITE
Sbjct: 841 HCLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITE 900

Query: 901 ALQKTFPPNWNSYNNVHMSSSLDSDDESGISDDEDEDDDICQEEVSNARDDDVVGRSWF 955
           ALQKTFPPNWNSYNNVHMSSSLDSDDE GISDDE+EDDDICQEEVS+ARDDDVVGRSWF
Sbjct: 901 ALQKTFPPNWNSYNNVHMSSSLDSDDEYGISDDENEDDDICQEEVSDARDDDVVGRSWF 959

[Close]

BLAST of Cp4.1LG09g03750 vs. ExPASy TrEMBL
Match: A0A6J1HUK8 (pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467602 PE=3 SV=1)

HSP 1 Score: 1840 bits (4765), Expect = 0.0
Identity = 929/964 (96.37%), Postives = 940/964 (97.51%), Query Frame = 0


Query: 1   MDVRSLSNATSTTSSAVFAPPRRRHHHSHPSSALIVFSLKRPPPPPPPSRSDSDDSSGST 60
           MDVRSLSNATSTTSSAVFAPPRRRHHHSHPSS LIVFSLKRPPPPPPP RSDSDDSSGST
Sbjct: 1   MDVRSLSNATSTTSSAVFAPPRRRHHHSHPSSTLIVFSLKRPPPPPPP-RSDSDDSSGST 60

Query: 61  TSISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANAPVLPLPPPPP---VSHSLAD 120
            SIS RIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSAN PV PLPPPPP   VSHS+AD
Sbjct: 61  ASISSRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANVPVFPLPPPPPPPPVSHSVAD 120

Query: 121 KLWLSSKLSPPPPPITEMPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWIK 180
           KLWLSSKLSP PPPITE+PEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWIK
Sbjct: 121 KLWLSSKLSPLPPPITEIPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWIK 180

Query: 181 KHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHGR 240
           KHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHGR
Sbjct: 181 KHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHGR 240

Query: 241 VLTVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKSFRMVIETEPEDWQAV 300
           VLTVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARK  RMVIETEP DWQAV
Sbjct: 241 VLTVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKGLRMVIETEPGDWQAV 300

Query: 301 VSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVG 360
           VSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPT+HVYTNLIHAYAVG
Sbjct: 301 VSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTSHVYTNLIHAYAVG 360

Query: 361 RDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHTLNAIIYG 420
           RDMEEALSCVRKMKEEGIEMSLVTYSI+VGGFAKMGNAEAADHWFQEAKEKH+LNAIIYG
Sbjct: 361 RDMEEALSCVRKMKEEGIEMSLVTYSIVVGGFAKMGNAEAADHWFQEAKEKHSLNAIIYG 420

Query: 421 NIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKEC 480
           NIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKEC
Sbjct: 421 NIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKEC 480

Query: 481 GLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANA 540
           GLNPSV+TYGCLINLYTKLGKVSKALEV KEME+AGIKHNMKTYSMLINGFLKLKDWANA
Sbjct: 481 GLNPSVVTYGCLINLYTKLGKVSKALEVCKEMENAGIKHNMKTYSMLINGFLKLKDWANA 540

Query: 541 FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHG 600
           FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHG
Sbjct: 541 FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHG 600

Query: 601 FARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVSPN 660
           FARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKM+KAVEILDEMTLAGVSPN
Sbjct: 601 FARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVSPN 660

Query: 661 EHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTK 720
           EHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTK
Sbjct: 661 EHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTK 720

Query: 721 EMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAG 780
           EMSAQNIPRN FIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAG
Sbjct: 721 EMSAQNIPRNAFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAG 780

Query: 781 DMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKISGLKPDKAVYH 840
           DMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMK+SGLKPDKAVYH
Sbjct: 781 DMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKAVYH 840

Query: 841 CLMTSLLSRATVAEGSIYPGILSICKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEA 900
           CLMTSLLSRATVAEGSIYPGILS+CKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEA
Sbjct: 841 CLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEA 900

Query: 901 LQKTFPPNWNSYNNVHMSSSLDSDDESGISDDEDED------DDICQEEVSNARDDDVVG 955
           LQKTFPPNWNSYNNVHMSSSLDSDDESGISDDEDED      DD CQE VS+ARDD VVG
Sbjct: 901 LQKTFPPNWNSYNNVHMSSSLDSDDESGISDDEDEDEDEDKDDDTCQEGVSDARDD-VVG 960

[Close]

BLAST of Cp4.1LG09g03750 vs. ExPASy TrEMBL
Match: A0A5D3CFW5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001920 PE=3 SV=1)

HSP 1 Score: 1695 bits (4390), Expect = 0.0
Identity = 856/966 (88.61%), Postives = 906/966 (93.79%), Query Frame = 0


Query: 1   MDVRSLSNATSTTSSAVFAPPRRRHHH--SHPSSALIVFSLKRPPPPPPPSRSDSDDSSG 60
           MDVRSLSNAT+TTSS VF+  RRRHHH  SHP  A+I+FSLK P PP PP RSDSDDSS 
Sbjct: 1   MDVRSLSNATTTTSSTVFSSHRRRHHHHYSHPPPAVILFSLKPPSPPTPP-RSDSDDSSS 60

Query: 61  STTSISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANAPVLPLPPPPP--VSHSLA 120
           S+ S+SGRIRRPQ LKT+SSPKRT+S+VPSNPL+NLVGSA  P+LP PPPPP  VSHSL+
Sbjct: 61  SSPSLSGRIRRPQTLKTTSSPKRTSSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLS 120

Query: 121 DKLWLSSKLSPPPPPITEMPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWI 180
           +KLWLSSKLSPPPPPI+E+ EED++E EEIETE+SSS+GRREVQFRQEGK+FVGNLPNWI
Sbjct: 121 EKLWLSSKLSPPPPPISELLEEDQNEIEEIETENSSSKGRREVQFRQEGKVFVGNLPNWI 180

Query: 181 KKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHG 240
           KKHEVQ+FFRQFGPV NVILIKGH+ T+RNAGYGF+IYDG TAAKSA+KAVEFDGVEFHG
Sbjct: 181 KKHEVQEFFRQFGPVKNVILIKGHNATERNAGYGFIIYDGPTAAKSAIKAVEFDGVEFHG 240

Query: 241 RVLTVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKSFRMVIETEPEDWQA 300
           RVLTVKLDDGRRLKEK  ERA+WMEGDDSVE+RS WHEERDKAR  FR VIETEPE+WQA
Sbjct: 241 RVLTVKLDDGRRLKEKTNERARWMEGDDSVEYRSHWHEERDKARNGFRKVIETEPENWQA 300

Query: 301 VVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAV 360
           VVSAF+RIKKPSRKEY LMVNYYARRGDMHRARETFEKMRARGIEP++HVYTNLIHAYAV
Sbjct: 301 VVSAFDRIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAV 360

Query: 361 GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHT-LNAII 420
           GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAE+ADHWFQEAKEKH+ +NAII
Sbjct: 361 GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAESADHWFQEAKEKHSSMNAII 420

Query: 421 YGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFK 480
           YGNIIYAYCQ CNMDRAEALVR+MEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFK
Sbjct: 421 YGNIIYAYCQRCNMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFK 480

Query: 481 ECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWA 540
           ECGLNPSVITYGCLINLY KLGKVSKALEVSKEMEHAGIKHNMKT+SMLINGFLKLKDWA
Sbjct: 481 ECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTFSMLINGFLKLKDWA 540

Query: 541 NAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPII 600
           NAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRH+PTTRTFMPII
Sbjct: 541 NAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPII 600

Query: 601 HGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVS 660
           HGFAR+G+M+KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKM+KA +ILDEMTLAGVS
Sbjct: 601 HGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVS 660

Query: 661 PNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAV 720
           PNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGL LDVYTYEALLKACCKSGRMQSALAV
Sbjct: 661 PNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLGLDVYTYEALLKACCKSGRMQSALAV 720

Query: 721 TKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSK 780
           TKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADL+QQMK+EGVQPDIHTYTSFINACSK
Sbjct: 721 TKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSK 780

Query: 781 AGDMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKISGLKPDKAV 840
           AGDMQRATKTI EMKS GVKPNVKTYTTLIHGWARASLPEKALSCF EMK+SGLKPDKAV
Sbjct: 781 AGDMQRATKTIEEMKSVGVKPNVKTYTTLIHGWARASLPEKALSCFEEMKLSGLKPDKAV 840

Query: 841 YHCLMTSLLSRATVAEGSIYPGILSICKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEIT 900
           YHCLMTSLLSRATVA+G IYPGILS+C+EMVD  LTVDMGTAVHWSKCL KIERTGGEIT
Sbjct: 841 YHCLMTSLLSRATVAQGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEIT 900

Query: 901 EALQKTFPPNWNSYNNVHMSSSLDSDDESGISDDEDEDDDICQEEVS-NARDD-----DV 955
           EALQKTFPPNWN YNN   SS++DSDDES ISDDED  DDICQ   S NA DD     DV
Sbjct: 901 EALQKTFPPNWNLYNNTLTSSNIDSDDESDISDDED--DDICQGGASSNAGDDGESDGDV 960

[Close]

BLAST of Cp4.1LG09g03750 vs. ExPASy TrEMBL
Match: A0A6J1D9Q6 (pentatricopeptide repeat-containing protein At5g04810, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018664 PE=4 SV=1)

HSP 1 Score: 1686 bits (4367), Expect = 0.0
Identity = 854/973 (87.77%), Postives = 902/973 (92.70%), Query Frame = 0


Query: 1   MDVRSLSNATSTTSSAVFAP--PRRRHHHSHPSSALIVFSLKRPPPPP---PPSRSDSDD 60
           MD RSLSN T+TTSSA F+   P RR HHSHPSSA+I+FSLK P PPP   P  RSDSDD
Sbjct: 1   MDARSLSNTTTTTSSACFSAVLPHRRRHHSHPSSAVIIFSLKPPLPPPHHSPSPRSDSDD 60

Query: 61  SSGSTTSISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANAPVLPLPPPPP----- 120
           SS ST S+SGRIRRPQ LKT+SSPKRTTSKVPSNPLKNLVGSA  PVLP PPPPP     
Sbjct: 61  SSSSTPSLSGRIRRPQTLKTTSSPKRTTSKVPSNPLKNLVGSAYVPVLPPPPPPPPPPPP 120

Query: 121 -VSHSLADKLWLSSKLSPPPPPITEMPEEDESENEEIETEDSSSEGRREVQFRQEGKIFV 180
            VS+SL++KLWLSSKLSPPPPP +E  +EDE+E EEI TE+SSS+GR E++ RQEGKIFV
Sbjct: 121 HVSYSLSNKLWLSSKLSPPPPPTSEASDEDENEVEEIVTENSSSKGRGEIELRQEGKIFV 180

Query: 181 GNLPNWIKKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEF 240
           GNLP+WIKKHE+Q+FFRQFGPV NVILIKGHD T+RNAGYGFVIYDG TAAKSAMKAVEF
Sbjct: 181 GNLPSWIKKHELQEFFRQFGPVKNVILIKGHDATERNAGYGFVIYDGLTAAKSAMKAVEF 240

Query: 241 DGVEFHGRVLTVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKSFRMVIET 300
           DGVEFHGRVLTVKLDDGRRLKEK  ERA+WMEGDDSVE+RSQWHEERDKAR  FR VIET
Sbjct: 241 DGVEFHGRVLTVKLDDGRRLKEKTEERARWMEGDDSVEYRSQWHEERDKARNGFRKVIET 300

Query: 301 EPEDWQAVVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTN 360
           EPE+WQAVV AFERIKKPSRKEY LMVNYYARRGDMHRARETFEKMRARGIEPT+HVYTN
Sbjct: 301 EPENWQAVVWAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPTSHVYTN 360

Query: 361 LIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKH 420
           LIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKM NAE+ADHWFQEAKEKH
Sbjct: 361 LIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMRNAESADHWFQEAKEKH 420

Query: 421 T-LNAIIYGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCL 480
           + LNAIIYGNIIYAYCQ CNM+RAEALVRQMEEEGIDAPIDIYHTMMDGYTM+GDE+KCL
Sbjct: 421 SSLNAIIYGNIIYAYCQTCNMERAEALVRQMEEEGIDAPIDIYHTMMDGYTMIGDEDKCL 480

Query: 481 LVFERFKECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGF 540
           LVFERFKECGLNPSVITYGCLINLYTKLGKV+KALEVSKEMEHAGIKHNMKTYSMLINGF
Sbjct: 481 LVFERFKECGLNPSVITYGCLINLYTKLGKVAKALEVSKEMEHAGIKHNMKTYSMLINGF 540

Query: 541 LKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTT 600
           LKLKDWANAFAIFEDLI+DGIKPDVVLYNNIITAFCGMGKMDRA+CTVKEMQKQRHRPTT
Sbjct: 541 LKLKDWANAFAIFEDLIRDGIKPDVVLYNNIITAFCGMGKMDRAICTVKEMQKQRHRPTT 600

Query: 601 RTFMPIIHGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDE 660
           RTFMPIIHGFAR+G+MRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKM+KAVEILDE
Sbjct: 601 RTFMPIIHGFARKGEMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDE 660

Query: 661 MTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGR 720
           MTL+GVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLR EGL+LDVYTYEALLKACCKSGR
Sbjct: 661 MTLSGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRSEGLELDVYTYEALLKACCKSGR 720

Query: 721 MQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTS 780
           MQSALAVTKEMSAQ IPRNTFIYNILIDGWARRGDVWEAADL+QQMK+EGVQPDIHTYTS
Sbjct: 721 MQSALAVTKEMSAQKIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTS 780

Query: 781 FINACSKAGDMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKISG 840
           FINACSKAGDMQRATKTI EM+S GVKPNVKTYTTLIHGWARASLPE ALSCF EMK+SG
Sbjct: 781 FINACSKAGDMQRATKTIEEMRSVGVKPNVKTYTTLIHGWARASLPENALSCFEEMKLSG 840

Query: 841 LKPDKAVYHCLMTSLLSRATVA-EGSIYPGILSICKEMVDSGLTVDMGTAVHWSKCLRKI 900
           LKPDKAVYHCLMTSLLSRATVA EGSIYPGILS+C+EMVDSGLTVDMGTAVHWSKCLRKI
Sbjct: 841 LKPDKAVYHCLMTSLLSRATVAAEGSIYPGILSVCREMVDSGLTVDMGTAVHWSKCLRKI 900

Query: 901 ERTGGEITEALQKTFPPNWNSYNNVHMSSSLDSDDESGISDDEDEDDDICQEEVSNA--- 955
           ERTGGEITEALQKTFPPNWNSY+N   SSS+D++DES +SDD    DDIC   VSNA   
Sbjct: 901 ERTGGEITEALQKTFPPNWNSYDNALTSSSVDAEDESDVSDD----DDICHGGVSNADED 960

[Close]

BLAST of Cp4.1LG09g03750 vs. ExPASy TrEMBL
Match: A0A1S3BFB6 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489379 PE=3 SV=1)

HSP 1 Score: 1686 bits (4365), Expect = 0.0
Identity = 855/972 (87.96%), Postives = 905/972 (93.11%), Query Frame = 0


Query: 1   MDVRSLSNATSTTSSAVFAPPRRRHHH--SHPSSALIVFSLKRPPPPPPPSRSDSDDSSG 60
           MDVRSLSNAT+TTSS VF+  RRRHHH  SHP  A+I+FSLK P PP PP RSDSDDSS 
Sbjct: 14  MDVRSLSNATTTTSSTVFSSHRRRHHHHYSHPPPAVILFSLKPPSPPTPP-RSDSDDSSS 73

Query: 61  STTSISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANAPVLPLPPPPP--VSHSLA 120
           S+ S+SGRIRRPQ LKT+SSPKRT+S+VPSNPL+NLVGSA  P+LP PPPPP  VSHSL+
Sbjct: 74  SSPSLSGRIRRPQTLKTTSSPKRTSSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLS 133

Query: 121 DKLWLSSKLSPPPPPITEMPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWI 180
           +KLWLSSKLSPPPPPI+E+ EED++E EEIETE+SSS+GRREVQFRQEGK+FVGNLPNWI
Sbjct: 134 EKLWLSSKLSPPPPPISELLEEDQNEIEEIETENSSSKGRREVQFRQEGKVFVGNLPNWI 193

Query: 181 KKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGY------GFVIYDGSTAAKSAMKAVEFD 240
           KKHEVQ+FFRQFGPV NVILIKGH+ T+RNAG       GF+IYDG TAAKSA+KAVEFD
Sbjct: 194 KKHEVQEFFRQFGPVKNVILIKGHNATERNAGXXXXXXXGFIIYDGPTAAKSAIKAVEFD 253

Query: 241 GVEFHGRVLTVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKSFRMVIETE 300
           GVEFHGRVLTVKLDDGRRLKEK  ERA+WMEGDDSVE+RS WHEERDKAR  FR VIETE
Sbjct: 254 GVEFHGRVLTVKLDDGRRLKEKTNERARWMEGDDSVEYRSHWHEERDKARNGFRKVIETE 313

Query: 301 PEDWQAVVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNL 360
           PE+WQAVVSAF+RIKKPSRKEY LMVNYYARRGDMHRARETFEKMRARGIEP++HVYTNL
Sbjct: 314 PENWQAVVSAFDRIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNL 373

Query: 361 IHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHT 420
           IHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAE+ADHWFQEAKEKH+
Sbjct: 374 IHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAESADHWFQEAKEKHS 433

Query: 421 -LNAIIYGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLL 480
            +NAIIYGNIIYAYCQ CNMDRAEALVR+MEEEGIDAPIDIYHTMMDGYTMVGDEEKCLL
Sbjct: 434 SMNAIIYGNIIYAYCQRCNMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLL 493

Query: 481 VFERFKECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFL 540
           VFERFKECGLNPSVITYGCLINLY KLGKVSKALEVSKEMEHAGIKHNMKT+SMLINGFL
Sbjct: 494 VFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTFSMLINGFL 553

Query: 541 KLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTR 600
           KLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRH+PTTR
Sbjct: 554 KLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTR 613

Query: 601 TFMPIIHGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEM 660
           TFMPIIHGFAR+G+M+KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKM+KA +ILDEM
Sbjct: 614 TFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEM 673

Query: 661 TLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRM 720
           TLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGL LDVYTYEALLKACCKSGRM
Sbjct: 674 TLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLGLDVYTYEALLKACCKSGRM 733

Query: 721 QSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSF 780
           QSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADL+QQMK+EGVQPDIHTYTSF
Sbjct: 734 QSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSF 793

Query: 781 INACSKAGDMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKISGL 840
           INACSKAGDMQRATKTI EMKS GVKPNVKTYTTLIHGWARASLPEKALSCF EMK+SGL
Sbjct: 794 INACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLIHGWARASLPEKALSCFEEMKLSGL 853

Query: 841 KPDKAVYHCLMTSLLSRATVAEGSIYPGILSICKEMVDSGLTVDMGTAVHWSKCLRKIER 900
           KPDKAVYHCLMTSLLSRATVA+G IYPGILS+C+EMVD  LTVDMGTAVHWSKCL KIER
Sbjct: 854 KPDKAVYHCLMTSLLSRATVAQGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIER 913

Query: 901 TGGEITEALQKTFPPNWNSYNNVHMSSSLDSDDESGISDDEDEDDDICQEEVS-NARDD- 955
           TGGEITEALQKTFPPNWN YNN   SS++DSDDES ISDDED  DDICQ   S NA DD 
Sbjct: 914 TGGEITEALQKTFPPNWNLYNNTLTSSNIDSDDESDISDDED--DDICQGGASSNAGDDG 973

[Close]

BLAST of Cp4.1LG09g03750 vs. TAIR 10
Match: AT5G04810.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 1256.5 bits (3250), Expect = 0.0e+00
Identity = 634/932 (68.03%), Postives = 762/932 (81.76%), Query Frame = 0


Query: 29  HPSSALIVFSLKRPPP-PPPPSRSDSDDSSGSTTSISGRIRRPQILKTSSSPKRTTSKVP 88
           H   A I FSLK+PPP PP P  S  D            +RRP+    SSS   + S +P
Sbjct: 25  HSPVASISFSLKQPPPQPPEPPESPPD------------LRRPEKSIGSSSSSSSPSPIP 84

Query: 89  S-------NPLKNLVG-SANAPVLPLPPPPPVS---HSLADKLWLSSKLSPPPPPITEMP 148
           S       NPLK L   S+ +P++       VS    SLA KL LSSKLSPPPPP    P
Sbjct: 85  SPKTPLKINPLKGLTNRSSVSPLVQSEVSSKVSSFGSSLASKLRLSSKLSPPPPPPPPPP 144

Query: 149 EEDESENEE---IETEDSSSEGRR-EVQFRQEGKIFVGNLPNWIKKHEVQQFFRQFGPVN 208
            E+ ++  +    +T+    E R  + +FRQEGKIFVGNLP WIKK E ++FFRQFGP+ 
Sbjct: 145 VEETTQFRDEFRSDTKPPEEETRNPQQEFRQEGKIFVGNLPTWIKKPEFEEFFRQFGPIE 204

Query: 209 NVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFHGRVLTVKLDDGRRLKEK 268
           NVILIKGH   ++NAG+GF+IY    A KSAMKAVEFDGVEFHGR+LTVKLDDG+RLK K
Sbjct: 205 NVILIKGHHEVEKNAGFGFIIY---AAEKSAMKAVEFDGVEFHGRILTVKLDDGKRLKTK 264

Query: 269 AYERAKWM---EGDDSVEFRSQWHEERDKARKSFRMVIETEPEDWQAVVSAFERIKKPSR 328
           A +R +W+   E D  +  +S WH+ER+ +RKS + +++T  ++WQAV+SAFE+I KPSR
Sbjct: 265 AEQRVRWVEEGEEDTKMSNKSSWHQEREGSRKSLQRILDTNGDNWQAVISAFEKISKPSR 324

Query: 329 KEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDMEEALSCVRK 388
            E+ LMV +Y RRGDMHRARETFE+MRARGI PT+ +YT+LIHAYAVGRDM+EALSCVRK
Sbjct: 325 TEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRK 384

Query: 389 MKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKH-TLNAIIYGNIIYAYCQICN 448
           MKEEGIEMSLVTYS++VGGF+K G+AEAAD+WF EAK  H TLNA IYG IIYA+CQ CN
Sbjct: 385 MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCN 444

Query: 449 MDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKECGLNPSVITYGC 508
           M+RAEALVR+MEEEGIDAPI IYHTMMDGYTMV DE+K L+VF+R KECG  P+V+TYGC
Sbjct: 445 MERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGC 504

Query: 509 LINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDG 568
           LINLYTK+GK+SKALEVS+ M+  G+KHN+KTYSM+INGF+KLKDWANAFA+FED++K+G
Sbjct: 505 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 564

Query: 569 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFARQGDMRKAL 628
           +KPDV+LYNNII+AFCGMG MDRA+ TVKEMQK RHRPTTRTFMPIIHG+A+ GDMR++L
Sbjct: 565 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 624

Query: 629 DVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVSPNEHTYTTIMHGY 688
           +VFDMMR  GC+PTVHT+N LI GLVEKR+M+KAVEILDEMTLAGVS NEHTYT IM GY
Sbjct: 625 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 684

Query: 689 ASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNT 748
           AS+GDTGKAF YFT+L++EGL +D++TYEALLKACCKSGRMQSALAVTKEMSA+NIPRN+
Sbjct: 685 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 744

Query: 749 FIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQRATKTIVE 808
           F+YNILIDGWARRGDVWEAADLIQQMKKEGV+PDIHTYTSFI+ACSKAGDM RAT+TI E
Sbjct: 745 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 804

Query: 809 MKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKISGLKPDKAVYHCLMTSLLSRAT 868
           M++ GVKPN+KTYTTLI GWARASLPEKALSC+ EMK  G+KPDKAVYHCL+TSLLSRA+
Sbjct: 805 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 864

Query: 869 VAEGSIYPGILSICKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEITEALQKTFPPNWNS 928
           +AE  IY G+++ICKEMV++GL VDMGTAVHWSKCL KIE +GGE+TE LQKTFPP+W+S
Sbjct: 865 IAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTETLQKTFPPDWSS 924

Query: 929 YNNVH----MSSSLDSDDESGISDDEDEDDDI 937
           +++ H      S +DSD++    +D ++D+D+
Sbjct: 925 HHHHHGFLDQVSDVDSDEDDVDGEDGEDDEDV 941

[Close]

BLAST of Cp4.1LG09g03750 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 247.7 bits (631), Expect = 3.8e-65
Identity = 147/536 (27.43%), Postives = 263/536 (49.07%), Query Frame = 0


Query: 342 PTTHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGN-AEAADH 401
           PT   ++ L  A A  +  +  L+  ++M+ +GI  +L T SI++  F +      A   
Sbjct: 86  PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145

Query: 402 WFQEAKEKHTLNAIIYGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTM 461
             +  K  +  N I +  +I   C    +  A  LV +M E G    +   +T+++G  +
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205

Query: 462 VGDEEKCLLVFERFKECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKT 521
            G E + +L+ ++  E G  P+ +TYG ++N+  K G+ + A+E+ ++ME   IK +   
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265

Query: 522 YSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQ 581
           YS++I+G  K     NAF +F ++   GI  +++ YN +I  FC  G+ D     +++M 
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325

Query: 582 KQRHRPTTRTFMPIIHGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMD 641
           K++  P   TF  +I  F ++G +R+A ++   M   G  P   TY +LI G  ++  +D
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385

Query: 642 KAVEILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALL 701
           KA +++D M   G  PN  T+  +++GY            F K+   G+  D  TY  L+
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445

Query: 702 KACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQ 761
           +  C+ G++  A  + +EM ++ +P N   Y IL+DG    G+  +A ++ ++++K  ++
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505

Query: 762 PDIHTYTSFINACSKAGDMQRATKTIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSC 821
            DI  Y   I+    A  +  A      +   GVKP VKTY  +I G  +     +A   
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565

Query: 822 FAEMKISGLKPDKAVYHCLMTSLLSRATVAEGSIYPGILSICKEMVDSGLTVDMGT 877
           F +M+  G  PD   Y     ++L RA + +G     +  + +E+   G +VD  T
Sbjct: 566 FRKMEEDGHAPDGWTY-----NILIRAHLGDGDATKSV-KLIEELKRCGFSVDAST 615

[Close]

BLAST of Cp4.1LG09g03750 vs. TAIR 10
Match: AT5G12100.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 245.0 bits (624), Expect = 2.5e-64
Identity = 157/571 (27.50%), Postives = 266/571 (46.58%), Query Frame = 0


Query: 307 PSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDMEEALSC 366
           PS    +L++++  +          F  +      P+  +Y   I A     D+ + L  
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 201

Query: 367 VRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKHTLNAII-YGNIIYAYCQ 426
             +MK + I  S+  Y++L+ G  K      A+  F E   +  L ++I Y  +I  YC+
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261

Query: 427 ICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKECGLNPSVIT 486
             N +++  +  +M+ + I+  +  ++T++ G    G  E    V +  K+ G  P   T
Sbjct: 262 AGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT 321

Query: 487 YGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLI 546
           +  L + Y+   K   AL V +    +G+K N  T S+L+N   K      A  I    +
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381

Query: 547 KDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFARQGDMR 606
             G+ P+ V+YN +I  +C  G +  A   ++ M+KQ  +P    +  +I  F   G+M 
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441

Query: 607 KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVSPNEHTYTTIM 666
            A    + M++ G  P+V TYN LI G   K + DK  +IL EM   G  PN  +Y T++
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501

Query: 667 HGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIP 726
           +         +A      + D G+   V  Y  L+  CC  G+++ A   +KEM  + I 
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561

Query: 727 RNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQRATKT 786
            N   YN LIDG +  G + EA DL+ ++ ++G++PD+ TY S I+    AG++QR    
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621

Query: 787 IVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMKISGLKPDKAVYHCLMTSLLS 846
             EMK +G+KP +KTY  LI    +  + E     F EM    LKPD  VY+ ++     
Sbjct: 622 YEEMKRSGIKPTLKTYHLLISLCTKEGI-ELTERLFGEM---SLKPDLLVYNGVLHCYAV 681

Query: 847 RATVAEGSIYPGILSICKEMVDSGLTVDMGT 877
              + +        ++ K+M++  + +D  T
Sbjct: 682 HGDMEKA------FNLQKQMIEKSIGLDKTT 702

[Close]

BLAST of Cp4.1LG09g03750 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 244.2 bits (622), Expect = 4.3e-64
Identity = 139/499 (27.86%), Postives = 247/499 (49.50%), Query Frame = 0


Query: 312 YSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDMEEALSCVRKMK 371
           YS+ +N + RR  +  A     KM   G EP     ++L++ Y   + + +A++ V +M 
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180

Query: 372 EEGIEMSLVTYSILVGG-FAKMGNAEAADHWFQEAKEKHTLNAIIYGNIIYAYCQICNMD 431
           E G +    T++ L+ G F     +EA     Q  +     + + YG ++   C+  ++D
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240

Query: 432 RAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKECGLNPSVITYGCLI 491
            A +L+++ME+  I+A + IY+T++DG       +  L +F      G+ P V TY  LI
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300

Query: 492 NLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIK 551
           +     G+ S A  +  +M    I  N+ T+S LI+ F+K      A  +++++IK  I 
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 552 PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFARQGDMRKALDV 611
           PD+  Y+++I  FC   ++D A    + M  +   P   T+  +I GF +   + + +++
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420

Query: 612 FDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVSPNEHTYTTIMHGYAS 671
           F  M   G +    TY  LI G  + R  D A  +  +M   GV PN  TY  ++ G   
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480

Query: 672 LGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFI 731
            G   KA   F  L+   ++ D+YTY  +++  CK+G+++    +   +S + +  N   
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540

Query: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQRATKTIVEMK 791
           YN +I G+ R+G   EA  L+++MK++G  P+  TY + I A  + GD + + + I EM+
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600

Query: 792 SAGVKPNVKT---YTTLIH 807
           S G   +  T    T ++H
Sbjct: 601 SCGFAGDASTIGLVTNMLH 619

[Close]

BLAST of Cp4.1LG09g03750 vs. TAIR 10
Match: AT1G63130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 238.4 bits (607), Expect = 2.3e-62
Identity = 144/521 (27.64%), Postives = 259/521 (49.71%), Query Frame = 0


Query: 307 PSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYAVGRDMEEALSC 366
           PS  E+S +++  A+           E+M+  GI    + Y+ LI+ +     +  AL+ 
Sbjct: 79  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138

Query: 367 VRKMKEEGIEMSLVTYSILVGGFAKMGN--AEAADHWFQEAKEKHTLNAIIYGNIIYAYC 426
           + KM + G E  +VT + L+ GF   GN  ++A     Q  +  +  ++  +  +I+   
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCH-GNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 198

Query: 427 QICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKECGLNPSVI 486
           +      A ALV +M  +G    +  Y  +++G    GD +  L + ++ ++  + P V+
Sbjct: 199 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 258

Query: 487 TYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDL 546
            Y  +I+       V+ AL +  EM++ GI+ N+ TY+ LI        W++A  +  D+
Sbjct: 259 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 318

Query: 547 IKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPIIHGFARQGDM 606
           I+  I P+VV ++ +I AF   GK+  A     EM K+   P   T+  +I+GF     +
Sbjct: 319 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 378

Query: 607 RKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMDKAVEILDEMTLAGVSPNEHTYTTI 666
            +A  +F++M    C P V TYN LI G  + +++D+ +E+  EM+  G+  N  TYTT+
Sbjct: 379 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 438

Query: 667 MHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNI 726
           +HG+    +   A   F ++  +G+  D+ TY  LL   C +G++++AL V + +    +
Sbjct: 439 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 498

Query: 727 PRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSKAGDMQRATK 786
             + + YNI+I+G  + G V +  DL   +  +GV+P++ TYT+ ++   + G  + A  
Sbjct: 499 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 558

Query: 787 TIVEMKSAGVKPNVKTYTTLIHGWARASLPEKALSCFAEMK 826
              EMK  G  P+  TY TLI    R      +     EM+
Sbjct: 559 LFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g03750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WMY5	0.0e+00	68.03	Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidop...	[more]
Q0WKV3	5.4e-64	27.43	Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop...	[more]
Q9FMQ1	3.5e-63	27.50	Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidop...	[more]
Q9LQ16	6.0e-63	27.86	Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX...	[more]
Q9LPX2	3.3e-61	26.16	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]

BLAST of Cp4.1LG09g03750 vs. NCBI nr


Match Name	Identity	Description
XP_023541364.1	100.00	pentatricopeptide repeat-containing protein At5g04810, chloroplastic [Cucurbita ...	[more]
XP_022945086.1	97.60	pentatricopeptide repeat-containing protein At5g04810, chloroplastic [Cucurbita ...	[more]
KAG6573890.1	97.70	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
XP_022968336.1	96.37	pentatricopeptide repeat-containing protein At5g04810, chloroplastic [Cucurbita ...	[more]
KAA0034647.1	88.61	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK09199...	[more]

BLAST of Cp4.1LG09g03750 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1FZV7	97.60	pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Cucurbit...	[more]
A0A6J1HUK8	96.37	pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Cucurbit...	[more]
A0A5D3CFW5	88.61	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1D9Q6	87.77	pentatricopeptide repeat-containing protein At5g04810, chloroplastic isoform X1 ...	[more]
A0A1S3BFB6	87.96	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g04810, chlo...	[more]

BLAST of Cp4.1LG09g03750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04810.1	0.0e+00	68.03	pentatricopeptide (PPR) repeat-containing protein	[more]
AT1G12300.1	3.8e-65	27.43	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G12100.1	2.5e-64	27.50	pentatricopeptide (PPR) repeat-containing protein	[more]
AT1G62910.1	4.3e-64	27.86	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G63130.1	2.3e-62	27.64	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 166..242 e-value: 5.2E-18 score: 75.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 167..239 e-value: 3.7E-13 score: 49.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 165..246 score: 16.278412
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 481..529 e-value: 2.0E-11 score: 43.9 coord: 621..669 e-value: 8.4E-15 score: 54.7 coord: 342..391 e-value: 2.2E-10 score: 40.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 540..594 e-value: 4.2E-9 score: 36.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 312..340 e-value: 6.7E-4 score: 19.7 coord: 450..479 e-value: 0.0038 score: 17.4 coord: 415..444 e-value: 0.0035 score: 17.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 659..693 e-value: 3.2E-6 score: 25.0 coord: 694..727 e-value: 6.4E-6 score: 24.0 coord: 380..408 e-value: 0.0024 score: 15.9 coord: 800..832 e-value: 8.3E-8 score: 30.0 coord: 764..798 e-value: 2.6E-7 score: 28.4 coord: 624..658 e-value: 2.9E-7 score: 28.2 coord: 450..482 e-value: 6.8E-5 score: 20.8 coord: 312..343 e-value: 5.4E-7 score: 27.4 coord: 590..622 e-value: 4.1E-8 score: 30.9 coord: 554..587 e-value: 4.0E-5 score: 21.5 coord: 415..444 e-value: 1.6E-4 score: 19.6 coord: 730..763 e-value: 8.8E-7 score: 26.7 coord: 520..553 e-value: 7.0E-7 score: 27.0 coord: 346..378 e-value: 2.6E-6 score: 25.2 coord: 484..517 e-value: 5.6E-6 score: 24.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 343..377 score: 10.237912
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 692..726 score: 11.23539
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 762..796 score: 12.068449
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 517..551 score: 11.41077
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 412..446 score: 9.898111
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 587..621 score: 11.432693
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 657..691 score: 10.347525
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 797..831 score: 11.893068
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 727..761 score: 12.572669
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 622..656 score: 11.575191
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 447..481 score: 8.95544
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 308..342 score: 11.454616
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 552..586 score: 10.961357
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 482..516 score: 10.413293
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 132..257 e-value: 3.3E-21 score: 77.8
IPR033443	Pentacotripeptide-repeat region of PRORP	PFAM	PF17177	PPR_long	coord: 703..840 e-value: 6.2E-15 score: 55.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 512..585 e-value: 1.1E-16 score: 62.9 coord: 407..511 e-value: 3.4E-17 score: 64.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 285..399 e-value: 9.0E-27 score: 95.6 coord: 592..708 e-value: 8.9E-36 score: 124.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 709..924 e-value: 8.0E-43 score: 148.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 913..955
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 922..941
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	PANTHER	PTHR47939	MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE	coord: 1..934
None	No IPR available	PANTHER	PTHR47939:SF1	OS04G0684500 PROTEIN	coord: 1..934
None	No IPR available	CDD	cd00590	RRM_SF	coord: 167..242 e-value: 1.04435E-16 score: 73.4933
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 277..485
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 160..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g03750.1	Cp4.1LG09g03750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding