Cp4.1LG09g03610 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g03610
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Unknown protein
Location	Cp4.1LG09: 2154768 .. 2159286 (-)
RNA-Seq Expression	Cp4.1LG09g03610
Synteny	Cp4.1LG09g03610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCGTGTACTGTTCTATTCGTTTTTCTCTCGTAGGCGTTGTTTTTCGGAAGCCGAATCGTGATTGGGATGGAGGAAAATAAGTTCGTGAGGGCTTCTGAGGCAGTTATTGTAGATTCCGATCTGCTGAAGAAGAAACTCGACTCTACGCGCCTTTCAGGTTTGCATAAGCTCCAGGTTTTGCTCTTTCTTTTTGAGCCTGAAGTATTCTGTGGATAAATGCTAGTATACTCGCATTTCTTGACCGCTGTTTATAGAAATAACAGTAGGAGATCTTGTTTAGGTCATTTCTGACTTTGATGCTAGCGTGATACTGGATTGATGGCTGCGTAGGGAAAGATAAGATTTGATGACTATTACTGTGCTAACTTCGTGAAGATTTCTTAGTGAATCTCTATTTTTTCAACCTGATGAACTTGATTTATGCTTTGCTGACAAGATTGAAACATGTATAGCCACTCATAATCTTCTAAAGCAGGGAAACCCTGAATATTATTCTAGGACGGATGAACTTTATAAATATTACCACCCTTTGGAATATCGTCCTACCATTTCGATAGAAGAGAAAACGAAGCTCAATATCGAAAGCTTCCTTGCGTCCTTTTTTGATACCTGCCTTTTCTACTTCCTGGACCAGGTCTTGAGTCTGAAGCTTCACGGATCTTTTAAGAATATTTGGATCGTTATTAGGAAAATCTCCGTCTCGAGTCTTGGGAAATTGAAGCGACCCCCTTCTGTTTCTTTTGTCTGTAATGTCATTTTTAATTGAATATTCAATGAATAGAGAGATTAAATCAAGAAAAAGAATGAAGAATTCAGGTTTAGAAAAAATAAAGAAATGGCAAGAACAAAAGTCGTATGGATACACAAAAACTACGTGGGTGGATGAATTCCATATTTGAAGTTGCAATCGGATCGATTCTTATCATTTCAGGGTACCTTCCTTTTTTTAGATGGCTTTTACTTTTCCTTGGTCATTTTATTAGCGGTTGTTATGATTGTTACATTTGAATGAGCTTTTGGTATGTTAATTCATAGTTTAAATAAAAATGAGCGTGCTCTTGATATGGCTGCTCCTCTTCATGACCAATTGGGTGATGTAGATGGCGCTATTGATAATAGTGCCTCTGTAAGAAAATGGACAATTTGGTGACCACATAGGGGATTTGGGGATTTCAGATGGTTCAAAGTACGACACTTGGATATCCGTGGGGTTTTTGTACGTAATCTTTTTAAACTTCCTTGCGTCGATGTCATCTGTTTGGGGTTTTTGTATGAACACATACTATAAAAAAATATGTTTGTGCTAGGTGAGAATTAAGGCCCTGTTTGGGTCGTATGAATATTCATTCTTGTACTCAATAATAAGCTCCTTTTGCAGGAATGACACCATCAAAAACTCTCTTGACCGCTACGCTACGAGTGCACTTTTGATATTGTCTACGTGGTAAGGCGAACATCACCTAAAATGGGAAGGAAAATCTCTACTTTTATTTCTCATGACGATTATTGTTAATATCTAACTTTTCTTCCCCATATCAAATACCATAAAACTTTAACCAATTTGAATGCTGACTGCAGAATGATGCATCCATGCTGGGAGTGGTTAAACTTGTACAACAGCTCTTTCCAGTTGGAGGTGTCTGAGGGACAGACCTTTCTATACGGTTAGTGAAGGCGATCTTACTTACAATATTCTTAGCTGAGTGAATATACTCGCAGCCTTTACTTCACATTCTTTTGTAGAGTAGTTATTTCAACGTAGAGCTGAGGAATTAATGTCTTGAATTGGGGTTTCTCTGCTGCTGTCACTGGTTGCTATTTGGTGGTCACTTACCATAATTAGTTATTTAGTTGTTTAGTCATTTGAAATTCTTTGTTTTATGAGATAAAAATCATTAAATCCCATTAGCTTTTGAATAATTTTTTTACATAATAATAGAACAAGATAATTCTATAGTTCTGATCTAATAGATTGGGTAGCTATTGCAAATTTGGAGTGAATGCTCAAGTTTTTAGACGATTATAGGGATTTGTTTCATCAAATTAACCTGAAACTTAAGTTTATTTGTTCCAAATCCACAAAAGGTACACATTATTTTATTAAATATATATATGTCATGAAATCTGTGGAGCAATAATTACAAGGAATTTAGTAAGTATGGAATTAATGGGCTTTATAAACATTTAACTTATGCCCTCTTCAATACTTCATTCCTTAGTACAGTGGTTTAAACAAGAAGGATCTCCAAAAGTTAATTAGAACTAAAACAGAGCTTTTGAGTTAACTTATGTAATTAATCCTTAGTCGTTGCTTTTGCCAAAATTTGATTCATCCAACATCATTTTGGCACGGTGGAATTCTATTTGTAGCCGTTGATGAAGGGGTGTTGATGAACTCAAACCTTTCTTCTTCACATCTTCCAGCAACTCCCTGATCGGAATTGCTGCGAGAAAGCTCTTGATATACTCTTGGCAGCACTCCTTCCCTGTGCATACAACCTCTTCGTCTGTATCATCATCATTCCTCGACTCATCTTTGTTCTCAGTCGAAGCTTCTTTTGGGCTACTTGACTGTTCTGGTGTTGTAGCTTCTTCAGAGTCACTTGGTTGCATGACATCGACCGGCGGTTTTTCTTCTAACATCTCTGTATTGTTTAGTTGTGGCACATCAGTAGTAGATGGTTCTGCCTCTGATGGTTCTGAGCTCTTTGATTGATTTGTGTCAATGGTGTTTTTCTCCTTCAATGACTCTTTGCTTTTTGATTGTTTTGTGTCAATGGAGGCTTTCTTATCTGATGACTCTGTGTTCTTTGATTGCTTTGTGTCGGAGGTTTTCTCCTCTGATGCCTTTGTTTTGTTTGGTAATCTACTAATTACTGTCTCCCTGTCGAATTTCAGAATGTACGCTTGATTGCACCCCTCGTAGAGCCGCTCGCCCAAAGTGTCTATGATGTAGTAAGCATCCTTGTCAACCTTCAAGATGAAGAAGTGGTCATTCCAGCTCACAATGTAGACCATCGATTCACCTGTATTTGTTGGAAGGTCTGCTGCAAGGAGGCTGATTTCATCCCATATGGTGTCGAAAGACATGGCGCCCTTAAGGAACTCGAAAACACCCTCTTCCTCCAATCCTTCTGGGTGGAAGAATCCAACATATGACTTCTCTGCAGCAACAGATAGAGGTCGGATTTTTGCATCAATCACCGTGTCGAGATCAAAGTGTTTATCAGGGAACTGCTCCAGGTAGTCTTTATTGTCACAAAGGTTTCTCCATTCTGCAGATCCATCTCTGATCAAGTTGTCTAATTCAGACTTGATGGGCATTTCATCTTGGTTGGAAAGTAACCAATCAGCAATAACAGCAACTAGAGCTGTGCAGGCACTTTCCCCAGAAGCACGCTCGCTCCTTTGATCAATAGAGGCGAAGAAGACTTCGGTGTTGACTTTCAAGTGTCCGTCTCGACTGGTTACCTCCTTCTGTTCCCAACTACCCACAGCAAAGTTATCATCTCCAAATGCAGCTGCTGATAACTCCAGATTATACCACTGCAAGAACAAGAAGAACAGGAGGCCATTATCATTGAGCTATAAGAAATACCTACAAAGTCTGAGTAAAGCAGAGCGAAACACAGTGCAGTTCAGGTCTTGAGAATATACCCAAGTGAAAAGCTCATTTGTGCTCTGCTGCCTACGGGCAAAGTCGATATCGTCTCCACCTTCTTCACCATAATGTTTCTTCAGAAGAGGCTCTTCTTTAATTTTACGAGATTTGAAGCTTAACTTCCTCTTCCTCCACGACAAGATTTTGCGCATCGAGTTCTGCTGTGTAGTTTGTGAACTATCACTATCAATGTCCAAGCATCCTGCACCATTGCCACAATAGATCCAACATTCATCTCCATTGTTGGTTTTTGTACCAGGGAGGAAAATTCCTGCTACACGGTTGGCATGGGCTAGTTTTTCATAACCAAATAGCTCCTGAACACGTGAATCCTCCTCGTTCCCACCATCATCTATCGAGTCCGAATCAAGCGAAGAACTCTGAGAAGAATCCTTATCCTTAATGTAAAACCCATCAACTGTAGCAATGTTTTCTTCATGGAATACTTCCTCGGGTTTTCCTGCTGATACACAATGTCTAAATATTTTAACTCTATCTAGACCTGCTCTTATTGCAGATAACCCTTCTTTCTCTGTTGACAAAGCAAATGGTGAAGTTGGGGAGAGCGTCACAGGCATAATCGACCTCCGCACCGTCCTCGAAGGCTTTGTATCAGTTCTCAGCTCCACGAGGCTAAGAGAGAGCTGCAAAATCGAAGACGAATTACATCAGGGAACAAGATGTGCAGATGTTGTTGAAGTTGAAATGTGTTAAAACTTACAAGGAGCAAGGGGCTAAGCTCTGCTGCAGTGCTGCCACGGACGTTGAGAGGAAGGCTGATCGGAATCTCATTTCCATCATATGAAGAAGCATATTCTGCAAGGTTCAGTGATGCAGTCCCGACTACAGCATAG

mRNA sequence

ATGTTCGCGTTGTTTTTCGGAAGCCGAATCGTGATTGGGATGGAGGAAAATAAGTTCGTGAGGGCTTCTGAGGCAGTTATTGTAGATTCCGATCTGCTGAAGAAGAAACTCGACTCTACGCGCCTTTCAGGAATGACACCATCAAAAACTCTCTTGACCGCTACGCTACGAAATGTACGCTTGATTGCACCCCTCGTAGAGCCGCTCGCCCAAAGTGTCTATGATGTAGTAAGCATCCTTGTCAACCTTCAAGATGAAGAAGTGACCATCGATTCACCTGTATTTGTTGGAAGGTCTGCTGCAAGGAGGCTGATTTCATCCCATATGGTGTCGAAAGACATGGCGCCCTTAAGGAACTCGAAAACACCCTCTTCCTCCAATCCTTCTGGGTGGAAGAATCCAACATATGACTTCTCTGCAGCAACAGATAGAGGTCGGATTTTTGCATCAATCACCGTGTCGAGATCAAAGTGTTTATCAGGGAACTGCTCCAGGAGCAAGGGGCTAAGCTCTGCTGCAGTGCTGCCACGGACGTTGAGAGGAAGGCTGATCGGAATCTCATTTCCATCATATGAAGAAGCATATTCTGCAAGGTTCAGTGATGCAGTCCCGACTACAGCATAG

Coding sequence (CDS)

ATGTTCGCGTTGTTTTTCGGAAGCCGAATCGTGATTGGGATGGAGGAAAATAAGTTCGTGAGGGCTTCTGAGGCAGTTATTGTAGATTCCGATCTGCTGAAGAAGAAACTCGACTCTACGCGCCTTTCAGGAATGACACCATCAAAAACTCTCTTGACCGCTACGCTACGAAATGTACGCTTGATTGCACCCCTCGTAGAGCCGCTCGCCCAAAGTGTCTATGATGTAGTAAGCATCCTTGTCAACCTTCAAGATGAAGAAGTGACCATCGATTCACCTGTATTTGTTGGAAGGTCTGCTGCAAGGAGGCTGATTTCATCCCATATGGTGTCGAAAGACATGGCGCCCTTAAGGAACTCGAAAACACCCTCTTCCTCCAATCCTTCTGGGTGGAAGAATCCAACATATGACTTCTCTGCAGCAACAGATAGAGGTCGGATTTTTGCATCAATCACCGTGTCGAGATCAAAGTGTTTATCAGGGAACTGCTCCAGGAGCAAGGGGCTAAGCTCTGCTGCAGTGCTGCCACGGACGTTGAGAGGAAGGCTGATCGGAATCTCATTTCCATCATATGAAGAAGCATATTCTGCAAGGTTCAGTGATGCAGTCCCGACTACAGCATAG

Protein sequence

MFALFFGSRIVIGMEENKFVRASEAVIVDSDLLKKKLDSTRLSGMTPSKTLLTATLRNVRLIAPLVEPLAQSVYDVVSILVNLQDEEVTIDSPVFVGRSAARRLISSHMVSKDMAPLRNSKTPSSSNPSGWKNPTYDFSAATDRGRIFASITVSRSKCLSGNCSRSKGLSSAAVLPRTLRGRLIGISFPSYEEAYSARFSDAVPTTA

Homology

[Close]

BLAST of Cp4.1LG09g03610 vs. NCBI nr
Match: KAG7012964.1 (hypothetical protein SDJN02_25718, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 59.3 bits (142), Expect = 1.07e-07
Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 3  ALFFGSRIVIGMEENKFVRASEAVIVDSDLLKKKLD 38
          ALFFGSR VIGME NKFVRASEAVIVDSDLLKKKL+
Sbjct: 12 ALFFGSRNVIGME-NKFVRASEAVIVDSDLLKKKLE 46

[Close]

BLAST of Cp4.1LG09g03610 vs. NCBI nr
Match: BAF01983.1 (hypothetical protein, partial [Arabidopsis thaliana])

HSP 1 Score: 57.8 bits (138), Expect = 3.43e-07
Identity = 42/95 (44.21%), Postives = 50/95 (52.63%), Query Frame = 0


Query: 104 LISSHMVSKDMAPLRNSKTPSSSNPSG-----WKNPTYDFSAATDRGRIFASITVSRSKC 163
           +ISS ++SKD+ PLR S+  SS + S      WKNP    S  T  G  FA  TVSRSKC
Sbjct: 1   MISSQILSKDITPLRKSRLTSSFSSSSFDFSRWKNPMNVLSGTTQMGLTFAWRTVSRSKC 60

Query: 164 LSGNCSRSKGLSSAAV------LPRTLRGRLIGIS 187
           LSGN SR    S   +      L R     L+GIS
Sbjct: 61  LSGNRSRYSSFSHIFLHSDDPSLIRLSNSDLVGIS 95

[Close]

BLAST of Cp4.1LG09g03610 vs. NCBI nr
Match: XP_022957072.1 (7-methylguanosine phosphate-specific 5'-nucleotidase A [Cucurbita moschata])

HSP 1 Score: 52.8 bits (125), Expect = 3.21e-04
Identity = 26/41 (63.41%), Postives = 34/41 (82.93%), Query Frame = 0


Query: 5  FFGSRIVIGMEENKFVRASEAVIVDSDLLKKKLDSTRLSGM 45
          F G+  VIGMEE  F++ASEAV+ D+DLLKKKL++ RLSG+
Sbjct: 33 FCGNPNVIGMEEQGFLQASEAVVADTDLLKKKLEAMRLSGL 73

[Close]

BLAST of Cp4.1LG09g03610 vs. NCBI nr
Match: XP_022150560.1 (cytosolic 5'-nucleotidase 3 [Momordica charantia])

HSP 1 Score: 52.0 bits (123), Expect = 5.86e-04
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 5  FFGSRIVIGMEENKFVRASEAVIVDSDLLKKKLDSTRLSG 44
          F GSR  IGMEE  F++ SEAV+ DSDLLKKKLD+ R SG
Sbjct: 33 FCGSRNAIGMEEKGFLKDSEAVVADSDLLKKKLDAMRGSG 72

[Close]

BLAST of Cp4.1LG09g03610 vs. NCBI nr
Match: KAG6601237.1 (Cytosolic 5'-nucleotidase 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032028.1 Cytosolic 5'-nucleotidase 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 52.0 bits (123), Expect = 5.86e-04
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 5  FFGSRIVIGMEENKFVRASEAVIVDSDLLKKKLDSTRLSG 44
          F G+  VIGMEE  F++ASEAV+ D+DLLKKKL++ RLSG
Sbjct: 33 FCGNPNVIGMEEQGFLQASEAVVADTDLLKKKLEAMRLSG 72

[Close]

BLAST of Cp4.1LG09g03610 vs. ExPASy TrEMBL
Match: Q0WLM4 (Uncharacterized protein (Fragment) OS=Arabidopsis thaliana OX=3702 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.66e-07
Identity = 42/95 (44.21%), Postives = 50/95 (52.63%), Query Frame = 0


Query: 104 LISSHMVSKDMAPLRNSKTPSSSNPSG-----WKNPTYDFSAATDRGRIFASITVSRSKC 163
           +ISS ++SKD+ PLR S+  SS + S      WKNP    S  T  G  FA  TVSRSKC
Sbjct: 1   MISSQILSKDITPLRKSRLTSSFSSSSFDFSRWKNPMNVLSGTTQMGLTFAWRTVSRSKC 60

Query: 164 LSGNCSRSKGLSSAAV------LPRTLRGRLIGIS 187
           LSGN SR    S   +      L R     L+GIS
Sbjct: 61  LSGNRSRYSSFSHIFLHSDDPSLIRLSNSDLVGIS 95

[Close]

BLAST of Cp4.1LG09g03610 vs. ExPASy TrEMBL
Match: A0A6J1GY58 (5'-nucleotidase OS=Cucurbita moschata OX=3662 GN=LOC111458559 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.55e-04
Identity = 26/41 (63.41%), Postives = 34/41 (82.93%), Query Frame = 0


Query: 5  FFGSRIVIGMEENKFVRASEAVIVDSDLLKKKLDSTRLSGM 45
          F G+  VIGMEE  F++ASEAV+ D+DLLKKKL++ RLSG+
Sbjct: 33 FCGNPNVIGMEEQGFLQASEAVVADTDLLKKKLEAMRLSGL 73

[Close]

BLAST of Cp4.1LG09g03610 vs. ExPASy TrEMBL
Match: A0A6J1J014 (5'-nucleotidase OS=Cucurbita maxima OX=3661 GN=LOC111481459 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 2.84e-04
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 5  FFGSRIVIGMEENKFVRASEAVIVDSDLLKKKLDSTRLSG 44
          F G+  VIGMEE  F++ASEAV+ D+DLLKKKL++ RLSG
Sbjct: 33 FCGNPNVIGMEEQGFLQASEAVVADTDLLKKKLEAMRLSG 72

[Close]

BLAST of Cp4.1LG09g03610 vs. ExPASy TrEMBL
Match: A0A6J1D8T4 (5'-nucleotidase OS=Momordica charantia OX=3673 GN=LOC111018671 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 2.84e-04
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 5  FFGSRIVIGMEENKFVRASEAVIVDSDLLKKKLDSTRLSG 44
          F GSR  IGMEE  F++ SEAV+ DSDLLKKKLD+ R SG
Sbjct: 33 FCGSRNAIGMEEKGFLKDSEAVVADSDLLKKKLDAMRGSG 72

[Close]

BLAST of Cp4.1LG09g03610 vs. ExPASy TrEMBL
Match: A0A1S3BGK8 (5'-nucleotidase OS=Cucumis melo OX=3656 GN=LOC103489365 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 7.15e-04
Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 4  LFFGSRIVIGMEENKFVRASEAVIVDSDLLKKKLDSTRLSG 44
          LF G R VIGM++  F++ +EAV+ DSDLLKKKLD+ R SG
Sbjct: 50 LFCGRRNVIGMDKEGFLQPAEAVVADSDLLKKKLDALRFSG 90

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g03610 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG09g03610 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012964.1	1.07e-07	91.67	hypothetical protein SDJN02_25718, partial [Cucurbita argyrosperma subsp. argyro...	[more]
BAF01983.1	3.43e-07	44.21	hypothetical protein, partial [Arabidopsis thaliana]	[more]
XP_022957072.1	3.21e-04	63.41	7-methylguanosine phosphate-specific 5'-nucleotidase A [Cucurbita moschata]	[more]
XP_022150560.1	5.86e-04	67.50	cytosolic 5'-nucleotidase 3 [Momordica charantia]	[more]
KAG6601237.1	5.86e-04	65.00	Cytosolic 5'-nucleotidase 3, partial [Cucurbita argyrosperma subsp. sororia] >KA...	[more]

BLAST of Cp4.1LG09g03610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q0WLM4	1.66e-07	44.21	Uncharacterized protein (Fragment) OS=Arabidopsis thaliana OX=3702 PE=2 SV=1	[more]
A0A6J1GY58	1.55e-04	63.41	5'-nucleotidase OS=Cucurbita moschata OX=3662 GN=LOC111458559 PE=3 SV=1	[more]
A0A6J1J014	2.84e-04	65.00	5'-nucleotidase OS=Cucurbita maxima OX=3661 GN=LOC111481459 PE=3 SV=1	[more]
A0A6J1D8T4	2.84e-04	67.50	5'-nucleotidase OS=Momordica charantia OX=3673 GN=LOC111018671 PE=3 SV=1	[more]
A0A1S3BGK8	7.15e-04	60.98	5'-nucleotidase OS=Cucumis melo OX=3656 GN=LOC103489365 PE=3 SV=1	[more]

BLAST of Cp4.1LG09g03610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g03610.1	Cp4.1LG09g03610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0009117	nucleotide metabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008253	5'-nucleotidase activity
molecular_function	GO:0000287	magnesium ion binding