Cp4.1LG09g02690 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g02690
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor TCP12-like
Location	Cp4.1LG09: 1576307 .. 1578204 (-)
RNA-Seq Expression	Cp4.1LG09g02690
Synteny	Cp4.1LG09g02690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATGACATGTCTCCCCTTCTCTTACTTATCATAATTCATATACTAATCACTATTTGATATCAATTGTAAAAACAGATATCTTTATGTTCTTCATCATTGCCCATTTGGAGTCCTCTCTGATATCAATTTCCCAACTGAGCTATCATTTCTAAACTATGCTTGCTTCTAACACCAATCAAATCCATGATGAACATGAAAGCCACCAACTTTCCTTACAATTCATAGATTACTACAACTTCGATCCTTTCCTCGATGAAGATTTCATTTTGAGTCAAATTTTGTATACTCAAAAACAGCAATTTCTTGATGCTAATAATTTTGAACCTGAAATTGGGTTTGAAATTAGTGTCAATAACACCAATGAGGAGATAACCCAGAAAGCTTTACCTCAAAAGAAGCCCATTTCTAGAAAGAGAAGCTCGAACAAGGATAGACATAGCAAGATCTGCACGTCAAAAGGGCCAAGAGATAGAAGAATGAGGCTTTCAATTGAAATTGCACGAAGCTTCTTTGATCTTCAAGATATGCTTGGGTTTGATAAAGCAAGCAAGACAGTGGAGTGGCTTTTTGCTAAATCAAGAAGTGCAATTAAGGAGCTAAAGGAGAAATTTTTGTCAGAGGGTCATAATTACAACAAAAGTTTTGATTTTTCTCCTCTTTTTAGGAAAGTTTCTGTTTTTGAAGCGCCTAGAGAGAAGAAGAGAAGGAAATTAAGGGTGGTTGATAAAGAATCAAGATCCAGGGCAAGAGCTAGGGCGAGGGAAAGAACAAGGGCAAAGATTGTTCGTCGTTTGGAGATATCAAAATGTGATTTTGAAGGAAACCCAATTGGGGATTGTATGATGGGTGATGTTAGTGAAGAAATTGGCACTAAAAACAAGATTTTTGAATTCGAACGAAGCCAAAACGAGAGATTTTTGAGCTCGAATGTCGAAAACTCAGCTGATGATCATGTTCATCTTCTTCCTTGTTCCTCCATGGATATGAGCTCCATGTCCTTGGACAGCACCAAAGCATCACCTGCAGGTAATTTCCAGAATTAGGGTTTAGTAAATTTCTCTTTGATCGAACCGTTGAGCTATGCTGAGATTTAGTAGTGGGTTCGGTATGTTAGGAATCATAACCCTCCACAATGGTATGATATTGTCCACTTTGAGCACAAACTCTTATGACTTTGCTTTTGGTTTCTCGAAAAACATCATACCAATAGAGATGTATTCCTTATTTATAAACCCATGATGATTCCCTAAATTAACCAATGTGAGACTCCCTTCTAAAAATCCTCCACACGGTAGATACGGTAAACGGGTAATTTTGTTATGTATTTTTGAGAAGGTATGAAAGTAAAAGTTTAAATTTTGATAAACAAAGCAAAGTACATAGGTAAAAAAAGAAACCCTTTTACTATTGATTCCTTGACCACTAAAAATTACTCATTTAGGTTAAAAAGATTCAAGTTCAGCCAAAAAGAACAAGTAAACCCTAGCTCAATATCAGCTTCATAGCTCATCAAGCATCATTATGGAGCCCTAGATTATGGTATGAAACAAGTATGATTTTGGTCTAATTTGCAGGCTTGAAATTGCTGGAACTTGATGAAATTGATGGTGTGCTGATCTTCTATGGAGAATGATGCAAGAATTTAATCCATGATTCAAGGTTTCATGATTTGTAATTTCAGACAGAAGTTAAGGTATTGTTTAGTTTAAGAATAAATGTTCTTTTCCTATGTCTCATTGTTCTTTCTTTGGGTAATATTCATCAATTAGCTGTTCTCTCAACAACTTTTATTTTGTTTGTGATATCTGTAGTACATGAATTCTTAATGGTGTGGGGAATCCATATGTTGCCTTGTTTTAATGTATATATATATATATATATATACACACACACGTTC

mRNA sequence

ACATGACATGTCTCCCCTTCTCTTACTTATCATAATTCATATACTAATCACTATTTGATATCAATTGTAAAAACAGATATCTTTATGTTCTTCATCATTGCCCATTTGGAGTCCTCTCTGATATCAATTTCCCAACTGAGCTATCATTTCTAAACTATGCTTGCTTCTAACACCAATCAAATCCATGATGAACATGAAAGCCACCAACTTTCCTTACAATTCATAGATTACTACAACTTCGATCCTTTCCTCGATGAAGATTTCATTTTGAGTCAAATTTTGTATACTCAAAAACAGCAATTTCTTGATGCTAATAATTTTGAACCTGAAATTGGGTTTGAAATTAGTGTCAATAACACCAATGAGGAGATAACCCAGAAAGCTTTACCTCAAAAGAAGCCCATTTCTAGAAAGAGAAGCTCGAACAAGGATAGACATAGCAAGATCTGCACGTCAAAAGGGCCAAGAGATAGAAGAATGAGGCTTTCAATTGAAATTGCACGAAGCTTCTTTGATCTTCAAGATATGCTTGGGTTTGATAAAGCAAGCAAGACAGTGGAGTGGCTTTTTGCTAAATCAAGAAGTGCAATTAAGGAGCTAAAGGAGAAATTTTTGTCAGAGGGTCATAATTACAACAAAAGTTTTGATTTTTCTCCTCTTTTTAGGAAAGTTTCTGTTTTTGAAGCGCCTAGAGAGAAGAAGAGAAGGAAATTAAGGGTGGTTGATAAAGAATCAAGATCCAGGGCAAGAGCTAGGGCGAGGGAAAGAACAAGGGCAAAGATTGTTCGTCGTTTGGAGATATCAAAATGTGATTTTGAAGGAAACCCAATTGGGGATTGTATGATGGGTGATGTTAGTGAAGAAATTGGCACTAAAAACAAGATTTTTGAATTCGAACGAAGCCAAAACGAGAGATTTTTGAGCTCGAATGTCGAAAACTCAGCTGATGATCATGTTCATCTTCTTCCTTGTTCCTCCATGGATATGAGCTCCATGTCCTTGGACAGCACCAAAGCATCACCTGCAGGCTTGAAATTGCTGGAACTTGATGAAATTGATGGTGTGCTGATCTTCTATGGAGAATGATGCAAGAATTTAATCCATGATTCAAGGTTTCATGATTTGTAATTTCAGACAGAAGTTAAGGTATTGTTTAGTTTAAGAATAAATGTTCTTTTCCTATGTCTCATTGTTCTTTCTTTGGGTAATATTCATCAATTAGCTGTTCTCTCAACAACTTTTATTTTGTTTGTGATATCTGTAGTACATGAATTCTTAATGGTGTGGGGAATCCATATGTTGCCTTGTTTTAATGTATATATATATATATATATATACACACACACGTTC

Coding sequence (CDS)

ATGCTTGCTTCTAACACCAATCAAATCCATGATGAACATGAAAGCCACCAACTTTCCTTACAATTCATAGATTACTACAACTTCGATCCTTTCCTCGATGAAGATTTCATTTTGAGTCAAATTTTGTATACTCAAAAACAGCAATTTCTTGATGCTAATAATTTTGAACCTGAAATTGGGTTTGAAATTAGTGTCAATAACACCAATGAGGAGATAACCCAGAAAGCTTTACCTCAAAAGAAGCCCATTTCTAGAAAGAGAAGCTCGAACAAGGATAGACATAGCAAGATCTGCACGTCAAAAGGGCCAAGAGATAGAAGAATGAGGCTTTCAATTGAAATTGCACGAAGCTTCTTTGATCTTCAAGATATGCTTGGGTTTGATAAAGCAAGCAAGACAGTGGAGTGGCTTTTTGCTAAATCAAGAAGTGCAATTAAGGAGCTAAAGGAGAAATTTTTGTCAGAGGGTCATAATTACAACAAAAGTTTTGATTTTTCTCCTCTTTTTAGGAAAGTTTCTGTTTTTGAAGCGCCTAGAGAGAAGAAGAGAAGGAAATTAAGGGTGGTTGATAAAGAATCAAGATCCAGGGCAAGAGCTAGGGCGAGGGAAAGAACAAGGGCAAAGATTGTTCGTCGTTTGGAGATATCAAAATGTGATTTTGAAGGAAACCCAATTGGGGATTGTATGATGGGTGATGTTAGTGAAGAAATTGGCACTAAAAACAAGATTTTTGAATTCGAACGAAGCCAAAACGAGAGATTTTTGAGCTCGAATGTCGAAAACTCAGCTGATGATCATGTTCATCTTCTTCCTTGTTCCTCCATGGATATGAGCTCCATGTCCTTGGACAGCACCAAAGCATCACCTGCAGGCTTGAAATTGCTGGAACTTGATGAAATTGATGGTGTGCTGATCTTCTATGGAGAATGA

Protein sequence

MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIGFEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFDLQDMLGFDKASKTVEWLFAKSRSAIKELKEKFLSEGHNYNKSFDFSPLFRKVSVFEAPREKKRRKLRVVDKESRSRARARARERTRAKIVRRLEISKCDFEGNPIGDCMMGDVSEEIGTKNKIFEFERSQNERFLSSNVENSADDHVHLLPCSSMDMSSMSLDSTKASPAGLKLLELDEIDGVLIFYGE

Homology

[Close]

BLAST of Cp4.1LG09g02690 vs. ExPASy Swiss-Prot
Match: A0AQW4 (Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.0e-27
Identity = 88/203 (43.35%), Postives = 121/203 (59.61%), Query Frame = 0


Query: 16  HQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIGF--EISVNNTNEEIT 75
           H  S  F    +F    DE F+++Q L   +QQ + AN  E    F  ++ +   NE+  
Sbjct: 39  HYSSPSFPFSSDFLESFDESFLINQFLL--QQQDVAANVVESPWKFCKKLELKKKNEKCV 98

Query: 76  QKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFDLQDMLGFDKASKT 135
             +  Q+    R+    +DRHSKICT++GPRDRRMRLS++IAR FFDLQDMLGFDKASKT
Sbjct: 99  DGSTSQEVQ-WRRTVKKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKT 158

Query: 136 VEWLFAKSRSAIKELKEKFLSE---GHNYNKSFDFSPLFRKVSVFEAPREKKRRKLRVVD 195
           +EWLF+KS+++IK+LKE+  +    G + +   D       + +  + R  K  +     
Sbjct: 159 IEWLFSKSKTSIKQLKERVAASEGGGKDEHLQVDEKEKDETLKLRVSKRRTKTMESSFKT 218

Query: 196 KESRSRARARARERTRAKIVRRL 214
           KESR RAR RARERT AK+  RL
Sbjct: 219 KESRERARKRARERTMAKMKMRL 238

[Close]

BLAST of Cp4.1LG09g02690 vs. ExPASy Swiss-Prot
Match: Q9SBV6 (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum linkianum OX=102601 GN=CYC PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 7.7e-20
Identity = 68/158 (43.04%), Postives = 92/158 (58.23%), Query Frame = 0


Query: 66  NNTNEEITQKALPQKKP-ISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFDLQDM 125
           NN N ++         P    K++  KDRHSKI TS+GPRDRR+RLSI IAR FFDLQ+M
Sbjct: 54  NNFNHDVVNGLNRDPSPTFPTKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEM 113

Query: 126 LGFDKASKTVEWLFAKSRSAIKELKEKFLSEGHNYNKSFDFSPLFRKVSVFEAPREKKRR 185
           LGFDK SKT++WL  KS++AIKEL +   ++ ++ +   D   +   V         K +
Sbjct: 114 LGFDKPSKTLDWLLTKSKTAIKELVQSKSTKSNSSSPCDDCEEVV-SVDSENVTDHSKGK 173

Query: 186 KLR-------------VVDKESRSRARARARERTRAKI 210
            L+                KESR++ARARARERT+ K+
Sbjct: 174 SLKANNKCKEAMDSHQAAAKESRAKARARARERTKEKM 210

[Close]

BLAST of Cp4.1LG09g02690 vs. ExPASy Swiss-Prot
Match: O49250 (Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 7.7e-20
Identity = 68/158 (43.04%), Postives = 92/158 (58.23%), Query Frame = 0


Query: 66  NNTNEEITQKALPQKKP-ISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFDLQDM 125
           NN N ++         P    K++  KDRHSKI TS+GPRDRR+RLSI IAR FFDLQ+M
Sbjct: 62  NNFNHDVVNGLNRDPSPTFPTKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEM 121

Query: 126 LGFDKASKTVEWLFAKSRSAIKELKEKFLSEGHNYNKSFDFSPLFRKVSVFEAPREKKRR 185
           LGFDK SKT++WL  KS++AIKEL +   ++ ++ +   D   +   V         K +
Sbjct: 122 LGFDKPSKTLDWLLTKSKTAIKELVQSKSTKSNSSSPCDDCEEVV-SVDSENVTDHSKGK 181

Query: 186 KLR-------------VVDKESRSRARARARERTRAKI 210
            L+                KESR++ARARARERT+ K+
Sbjct: 182 SLKANNKCKEAMDSHQAAAKESRAKARARARERTKEKM 218

[Close]

BLAST of Cp4.1LG09g02690 vs. ExPASy Swiss-Prot
Match: Q9SNW8 (Transcription factor DICHOTOMA OS=Antirrhinum majus OX=4151 GN=DICH PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 7.7e-20
Identity = 79/189 (41.80%), Postives = 106/189 (56.08%), Query Frame = 0


Query: 54  NFEPEI---GFEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRL 113
           N EP+    GF   V  TN +     L     +++K +  KDRHSKI   +GPRDRR+RL
Sbjct: 52  NLEPDALFNGFHHDVGGTNGD----PLVLANTLAKKHTPKKDRHSKINRPQGPRDRRVRL 111

Query: 114 SIEIARSFFDLQDMLGFDKASKTVEWLFAKSRSAIKELKEKFLSEGH--NYNKSFDFSPL 173
           SI IAR FFDLQ+MLGFDK SKT++WL  KS+ AIKEL +   S+ +  N     D   L
Sbjct: 112 SIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKEAIKELVQSKSSKSNISNSPSECDQEVL 171

Query: 174 FRKVSVFEAPREKKRRKLR---------VVD--KESRSRARARARERTRAKI-VRRLEIS 225
              +    + + K    L           VD  KESR++ARARARERT+ K+ +++L   
Sbjct: 172 SADLPYIGSSKGKAAVGLNSNKCKGGRDAVDLAKESRAKARARARERTKEKMCIKQLNQE 231

[Close]

BLAST of Cp4.1LG09g02690 vs. ExPASy Swiss-Prot
Match: Q9SBV9 (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum cirrhigerum OX=102600 GN=CYC PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.0e-19
Identity = 67/158 (42.41%), Postives = 92/158 (58.23%), Query Frame = 0


Query: 66  NNTNEEITQKALPQKKP-ISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFDLQDM 125
           NN N ++         P    K++  KDRHSKI TS+GPRDRR+RLSI IAR FFDLQ+M
Sbjct: 54  NNFNHDVVNGLNRDPSPTFPTKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEM 113

Query: 126 LGFDKASKTVEWLFAKSRSAIKELKEKFLSEGHNYNKSFDFSPLFRKVSVFEAPREKKRR 185
           LGFDK SKT++WL  KS++A+KEL +   ++ ++ +   D   +   V         K +
Sbjct: 114 LGFDKPSKTLDWLLTKSKTAVKELVQSKSTKSNSSSPCDDCEEVV-SVESENVTDHSKGK 173

Query: 186 KLR-------------VVDKESRSRARARARERTRAKI 210
            L+                KESR++ARARARERT+ K+
Sbjct: 174 SLKANNKCKEAMDSHQAAAKESRAKARARARERTKEKM 210

[Close]

BLAST of Cp4.1LG09g02690 vs. NCBI nr
Match: XP_023542921.1 (transcription factor TCP12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 593 bits (1529), Expect = 2.42e-213
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0


Query: 1   MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG 60
           MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG
Sbjct: 1   MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG 60

Query: 61  FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD 120
           FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD
Sbjct: 61  FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD 120

Query: 121 LQDMLGFDKASKTVEWLFAKSRSAIKELKEKFLSEGHNYNKSFDFSPLFRKVSVFEAPRE 180
           LQDMLGFDKASKTVEWLFAKSRSAIKELKEKFLSEGHNYNKSFDFSPLFRKVSVFEAPRE
Sbjct: 121 LQDMLGFDKASKTVEWLFAKSRSAIKELKEKFLSEGHNYNKSFDFSPLFRKVSVFEAPRE 180

Query: 181 KKRRKLRVVDKESRSRARARARERTRAKIVRRLEISKCDFEGNPIGDCMMGDVSEEIGTK 240
           KKRRKLRVVDKESRSRARARARERTRAKIVRRLEISKCDFEGNPIGDCMMGDVSEEIGTK
Sbjct: 181 KKRRKLRVVDKESRSRARARARERTRAKIVRRLEISKCDFEGNPIGDCMMGDVSEEIGTK 240

Query: 241 NKIFEFERSQNERFLSSNVENSADDHVHLLPCSSMDMSSMSLDSTKASPAGLKLLELDEI 300
           NKIFEFERSQNERFLSSNVENSADDHVHLLPCSSMDMSSMSLDSTKASPAGLKLLELDEI
Sbjct: 241 NKIFEFERSQNERFLSSNVENSADDHVHLLPCSSMDMSSMSLDSTKASPAGLKLLELDEI 300

Query: 301 DGVLIFYGE 309
           DGVLIFYGE
Sbjct: 301 DGVLIFYGE 309

[Close]

BLAST of Cp4.1LG09g02690 vs. NCBI nr
Match: KAG6573996.1 (Transcription factor TCP12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013055.1 Transcription factor TCP12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 572 bits (1473), Expect = 8.29e-205
Identity = 299/309 (96.76%), Postives = 304/309 (98.38%), Query Frame = 0


Query: 1   MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG 60
           MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG
Sbjct: 1   MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG 60

Query: 61  FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD 120
           FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD
Sbjct: 61  FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD 120

Query: 121 LQDMLGFDKASKTVEWLFAKSRSAIKELKEKFLSEGHNYNKSFDFSPLFRKVSVFEAPRE 180
           LQDMLGFDKASKTVEWLFAKSRSAIKELKEK+LSEG+NYNKSFDFSPLFRKVSVFEAPRE
Sbjct: 121 LQDMLGFDKASKTVEWLFAKSRSAIKELKEKYLSEGNNYNKSFDFSPLFRKVSVFEAPRE 180

Query: 181 KKRRKLRVVDKESRSRARARARERTRAKIVRRLEISKCDFEGNPIGDCMMGDVSEEIGTK 240
           KKRRKLRVVDKESRS+ARARARERTRAKIVRRLEISKCDFEGNPIGDCMMGDVSEEIGTK
Sbjct: 181 KKRRKLRVVDKESRSKARARARERTRAKIVRRLEISKCDFEGNPIGDCMMGDVSEEIGTK 240

Query: 241 NKIFEFERSQNERFLSSNVENSADDHVHLLPCSSMDMSSMSLDSTKASPAGLKLLELDEI 300
           NK FEFE  +NERFLSSNV+NSAD HVHLLP SSMDMSSMSLDSTKASPAGLKLLELDEI
Sbjct: 241 NKNFEFEPGENERFLSSNVQNSADHHVHLLPGSSMDMSSMSLDSTKASPAGLKLLELDEI 300

Query: 301 DGVLIFYGE 309
           DGVLIFYGE
Sbjct: 301 DGVLIFYGE 309

[Close]

BLAST of Cp4.1LG09g02690 vs. NCBI nr
Match: XP_022945400.1 (transcription factor TCP12-like [Cucurbita moschata])

HSP 1 Score: 569 bits (1466), Expect = 9.31e-204
Identity = 299/309 (96.76%), Postives = 305/309 (98.71%), Query Frame = 0


Query: 1   MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG 60
           MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG
Sbjct: 1   MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG 60

Query: 61  FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD 120
           FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD
Sbjct: 61  FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD 120

Query: 121 LQDMLGFDKASKTVEWLFAKSRSAIKELKEKFLSEGHNYNKSFDFSPLFRKVSVFEAPRE 180
           LQDMLGFDKASKTVEWLFAKSRSAIKELKEK+LSEG+NYNKSFDFSPLFRKVSVFEAPRE
Sbjct: 121 LQDMLGFDKASKTVEWLFAKSRSAIKELKEKYLSEGNNYNKSFDFSPLFRKVSVFEAPRE 180

Query: 181 KKRRKLRVVDKESRSRARARARERTRAKIVRRLEISKCDFEGNPIGDCMMGDVSEEIGTK 240
           KKRRKLRVVDKESRS+ARARARERTRAKIVRRLEISKCDFEGNPIGDCMMGDVSEEIGTK
Sbjct: 181 KKRRKLRVVDKESRSKARARARERTRAKIVRRLEISKCDFEGNPIGDCMMGDVSEEIGTK 240

Query: 241 NKIFEFERSQNERFLSSNVENSADDHVHLLPCSSMDMSSMSLDSTKASPAGLKLLELDEI 300
           NK FEFER +NERFLSSNV+NSAD HVHLLP SSMDMSSMSLDSTKASPAGLK+LELDEI
Sbjct: 241 NKNFEFERGENERFLSSNVKNSAD-HVHLLPGSSMDMSSMSLDSTKASPAGLKVLELDEI 300

Query: 301 DGVLIFYGE 309
           DGVLIFYGE
Sbjct: 301 DGVLIFYGE 308

[Close]

BLAST of Cp4.1LG09g02690 vs. NCBI nr
Match: XP_022968428.1 (transcription factor TCP12-like [Cucurbita maxima])

HSP 1 Score: 566 bits (1459), Expect = 1.09e-202
Identity = 298/309 (96.44%), Postives = 303/309 (98.06%), Query Frame = 0


Query: 1   MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG 60
           MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG
Sbjct: 1   MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG 60

Query: 61  FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD 120
           FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD
Sbjct: 61  FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD 120

Query: 121 LQDMLGFDKASKTVEWLFAKSRSAIKELKEKFLSEGHNYNKSFDFSPLFRKVSVFEAPRE 180
           LQDMLGFDKASKTVEWLFAKSRSAIKELKEK+LSE HNYNKSFDFSPLFRKVSVFEAPRE
Sbjct: 121 LQDMLGFDKASKTVEWLFAKSRSAIKELKEKYLSESHNYNKSFDFSPLFRKVSVFEAPRE 180

Query: 181 KKRRKLRVVDKESRSRARARARERTRAKIVRRLEISKCDFEGNPIGDCMMGDVSEEIGTK 240
           KKRRKLRVVDKESRS+ARARARERTRAKIV RLEISKCDFEGNPIGDCMMGDVSEEIGTK
Sbjct: 181 KKRRKLRVVDKESRSKARARARERTRAKIVHRLEISKCDFEGNPIGDCMMGDVSEEIGTK 240

Query: 241 NKIFEFERSQNERFLSSNVENSADDHVHLLPCSSMDMSSMSLDSTKASPAGLKLLELDEI 300
           NKIFEF++S+NERFLSSNVENSAD HVHLLP SSMDMSSMSLDS KASPAGLKLLELDEI
Sbjct: 241 NKIFEFKQSENERFLSSNVENSAD-HVHLLPGSSMDMSSMSLDSIKASPAGLKLLELDEI 300

Query: 301 DGVLIFYGE 309
           DG LIFYGE
Sbjct: 301 DGGLIFYGE 308

[Close]

BLAST of Cp4.1LG09g02690 vs. NCBI nr
Match: XP_038893072.1 (transcription factor TCP18-like [Benincasa hispida])

HSP 1 Score: 322 bits (824), Expect = 5.34e-105
Identity = 211/361 (58.45%), Postives = 244/361 (67.59%), Query Frame = 0


Query: 8   QIHD----------EHESHQLSLQFIDYYN------FDPFLDE--DFILSQILYTQKQQF 67
           QIHD          E ++H  SLQ ID YN      F+PFLD+  +FIL  ILY+QK Q 
Sbjct: 27  QIHDQNQNPMSRLFEQQNHPPSLQLIDCYNYNYNYNFNPFLDDHQEFILGHILYSQKHQL 86

Query: 68  L--DANNFEPEIGFEISVNNTNEEITQKAL-------------PQKKPISRKRSSN---- 127
           L  ++N+F+PEIG   S NNTN E T  +              P+K  ISRKRSS+    
Sbjct: 87  LGNNSNSFDPEIGLIESTNNTNNEATTTSQNSSQNKAKTDHTSPKKPIISRKRSSSGMKK 146

Query: 128 KDRHSKICTSKGPRDRRMRLSIEIARSFFDLQDMLGFDKASKTVEWLFAKSRSAIKELKE 187
           KDRHSKICTSKGPRDRRMRLS+EIAR+FFDLQDMLGFDKASKTVEWLF KSR+AIKELKE
Sbjct: 147 KDRHSKICTSKGPRDRRMRLSLEIARNFFDLQDMLGFDKASKTVEWLFTKSRNAIKELKE 206

Query: 188 KFLSEGHNYNKSFDFSPLFRKVSVFE---APREKKRRKLRVVDKESRSRARARARERTRA 247
           K+LSE +   KS   S L  K+SV+     PR KKRR+LR+VDKESR +ARARARERTRA
Sbjct: 207 KYLSEANR--KSSCDSTLVTKLSVYNDKAVPRGKKRRRLRIVDKESRYKARARARERTRA 266

Query: 248 KIVR-RLEISKCDFEGNPIGDCMMGDVSEEIG-TKNKIFEFERSQNERFLSSNVENSAD- 307
           K +R  LEISK DFEGNP G C MGDV EEI  TK K+      +NE+ L S  +NSA  
Sbjct: 267 KSIRCGLEISKTDFEGNPDGVCKMGDVIEEISSTKRKMKHVSICENEKILRSKGKNSASL 326

Query: 308 ----------------DHVHLLPCSSMDMSSMSLDSTKASPAGLKLLELDEIDGVLIFYG 309
                           D +HLLP SSMDM+++SLD+ KASPAGLKLLELDEIDGVLIFYG
Sbjct: 327 ISNQCEDKRVSKEICSDEIHLLPDSSMDMATLSLDTMKASPAGLKLLELDEIDGVLIFYG 385

[Close]

BLAST of Cp4.1LG09g02690 vs. ExPASy TrEMBL
Match: A0A6J1G0U4 (transcription factor TCP12-like OS=Cucurbita moschata OX=3662 GN=LOC111449645 PE=4 SV=1)

HSP 1 Score: 569 bits (1466), Expect = 4.51e-204
Identity = 299/309 (96.76%), Postives = 305/309 (98.71%), Query Frame = 0


Query: 1   MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG 60
           MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG
Sbjct: 1   MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG 60

Query: 61  FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD 120
           FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD
Sbjct: 61  FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD 120

Query: 121 LQDMLGFDKASKTVEWLFAKSRSAIKELKEKFLSEGHNYNKSFDFSPLFRKVSVFEAPRE 180
           LQDMLGFDKASKTVEWLFAKSRSAIKELKEK+LSEG+NYNKSFDFSPLFRKVSVFEAPRE
Sbjct: 121 LQDMLGFDKASKTVEWLFAKSRSAIKELKEKYLSEGNNYNKSFDFSPLFRKVSVFEAPRE 180

Query: 181 KKRRKLRVVDKESRSRARARARERTRAKIVRRLEISKCDFEGNPIGDCMMGDVSEEIGTK 240
           KKRRKLRVVDKESRS+ARARARERTRAKIVRRLEISKCDFEGNPIGDCMMGDVSEEIGTK
Sbjct: 181 KKRRKLRVVDKESRSKARARARERTRAKIVRRLEISKCDFEGNPIGDCMMGDVSEEIGTK 240

Query: 241 NKIFEFERSQNERFLSSNVENSADDHVHLLPCSSMDMSSMSLDSTKASPAGLKLLELDEI 300
           NK FEFER +NERFLSSNV+NSAD HVHLLP SSMDMSSMSLDSTKASPAGLK+LELDEI
Sbjct: 241 NKNFEFERGENERFLSSNVKNSAD-HVHLLPGSSMDMSSMSLDSTKASPAGLKVLELDEI 300

Query: 301 DGVLIFYGE 309
           DGVLIFYGE
Sbjct: 301 DGVLIFYGE 308

[Close]

BLAST of Cp4.1LG09g02690 vs. ExPASy TrEMBL
Match: A0A6J1HXZ8 (transcription factor TCP12-like OS=Cucurbita maxima OX=3661 GN=LOC111467675 PE=4 SV=1)

HSP 1 Score: 566 bits (1459), Expect = 5.26e-203
Identity = 298/309 (96.44%), Postives = 303/309 (98.06%), Query Frame = 0


Query: 1   MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG 60
           MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG
Sbjct: 1   MLASNTNQIHDEHESHQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIG 60

Query: 61  FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD 120
           FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD
Sbjct: 61  FEISVNNTNEEITQKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFD 120

Query: 121 LQDMLGFDKASKTVEWLFAKSRSAIKELKEKFLSEGHNYNKSFDFSPLFRKVSVFEAPRE 180
           LQDMLGFDKASKTVEWLFAKSRSAIKELKEK+LSE HNYNKSFDFSPLFRKVSVFEAPRE
Sbjct: 121 LQDMLGFDKASKTVEWLFAKSRSAIKELKEKYLSESHNYNKSFDFSPLFRKVSVFEAPRE 180

Query: 181 KKRRKLRVVDKESRSRARARARERTRAKIVRRLEISKCDFEGNPIGDCMMGDVSEEIGTK 240
           KKRRKLRVVDKESRS+ARARARERTRAKIV RLEISKCDFEGNPIGDCMMGDVSEEIGTK
Sbjct: 181 KKRRKLRVVDKESRSKARARARERTRAKIVHRLEISKCDFEGNPIGDCMMGDVSEEIGTK 240

Query: 241 NKIFEFERSQNERFLSSNVENSADDHVHLLPCSSMDMSSMSLDSTKASPAGLKLLELDEI 300
           NKIFEF++S+NERFLSSNVENSAD HVHLLP SSMDMSSMSLDS KASPAGLKLLELDEI
Sbjct: 241 NKIFEFKQSENERFLSSNVENSAD-HVHLLPGSSMDMSSMSLDSIKASPAGLKLLELDEI 300

Query: 301 DGVLIFYGE 309
           DG LIFYGE
Sbjct: 301 DGGLIFYGE 308

[Close]

BLAST of Cp4.1LG09g02690 vs. ExPASy TrEMBL
Match: A0A6J1GZV4 (transcription factor CYCLOIDEA-like OS=Cucurbita moschata OX=3662 GN=LOC111458752 PE=4 SV=1)

HSP 1 Score: 297 bits (760), Expect = 1.18e-96
Identity = 197/336 (58.63%), Postives = 227/336 (67.56%), Query Frame = 0


Query: 1   MLAS---NTNQIHDEHESHQLSLQFIDYYNFDPFLDE-DFILSQILYTQKQQFLDANNFE 60
           MLAS   N+ QIHDE        Q ID YNF+PFLD+ DFI   ILY             
Sbjct: 1   MLASSIDNSIQIHDERFQ-----QTIDCYNFNPFLDDHDFIFGHILY------------- 60

Query: 61  PEIGFEISVNNTNEEIT--QKALPQKKPISRKRSSN-KDRHSKICTSKGPRDRRMRLSIE 120
           PEIG   S NNT+ + T   KA  Q  PISRKRSS  KDRHSKICTSKGPRDRRMRLS+E
Sbjct: 61  PEIGLG-SANNTSNDTTTAHKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLE 120

Query: 121 IARSFFDLQDMLGFDKASKTVEWLFAKSRSAIKELKEKFLSEGHNYNKSFDFSPLFRKVS 180
           IAR FFDLQDMLGFDKASKTVEWLF KSRSAIKEL+EKFL E ++       S L   VS
Sbjct: 121 IARRFFDLQDMLGFDKASKTVEWLFTKSRSAIKELREKFLLEANSSE-----STLVTNVS 180

Query: 181 VF-------EAPREKKRRKLRVVDKESRSRARARARERTRAKIVR-RLEISKCDFEGNPI 240
           ++       E PR KKRRKLR+VDKESR +ARARAR RT+AK++R R EISK +FEGNP+
Sbjct: 181 LYHDHDHDQEVPRGKKRRKLRIVDKESRFKARARARARTKAKLIRARFEISKSNFEGNPV 240

Query: 241 GDCMMGDVSEEIGTKNK-IFEF-----ERSQNERFLSSN------VENSADDHVHLLPCS 300
           G C M DV EE  TK+K +  F      +++N   L SN      V   +   +HLLPCS
Sbjct: 241 GVCKMEDVIEESSTKSKSVANFPQNLGSKAKNSASLISNHCYDKRVSKESCSEIHLLPCS 300

Query: 301 SMDMSSMSLDSTKASPAGLKLLELDEIDGVLIFYGE 309
           SMDM ++SLD+ +ASPAGLKL ELDE+DGVLIFYGE
Sbjct: 301 SMDMGTLSLDTMRASPAGLKLSELDEVDGVLIFYGE 312

[Close]

BLAST of Cp4.1LG09g02690 vs. ExPASy TrEMBL
Match: A0A6J1J441 (transcription factor CYCLOIDEA-like OS=Cucurbita maxima OX=3661 GN=LOC111482452 PE=4 SV=1)

HSP 1 Score: 294 bits (752), Expect = 1.85e-95
Identity = 200/335 (59.70%), Postives = 227/335 (67.76%), Query Frame = 0


Query: 1   MLAS---NTNQIHDEHESHQLSLQFIDYYNFDPFLDE-DFILSQILYTQKQQFLDANNFE 60
           MLAS   N+ QIHDE        Q ID YNF+PFLD+ DFI   ILY             
Sbjct: 1   MLASSIDNSIQIHDERFQ-----QTIDCYNFNPFLDDQDFIFGHILY------------- 60

Query: 61  PEIGFEISVNNTNEEIT--QKALPQKKPISRKRSSN-KDRHSKICTSKGPRDRRMRLSIE 120
           PEIG   S NNTN + T   KA  Q  PISRKRSS  KDRHSKICTSKGPRDRRMRLS+E
Sbjct: 61  PEIGLG-SANNTNNDTTTAHKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLE 120

Query: 121 IARSFFDLQDMLGFDKASKTVEWLFAKSRSAIKELKEKFLSEGHNYNKSFDFSPLFRKVS 180
           IAR FFDLQDMLGFDKASKTVEWLF KSRSAIKELKEKFL + H+       S L R VS
Sbjct: 121 IARRFFDLQDMLGFDKASKTVEWLFTKSRSAIKELKEKFLLKVHSSG-----STLVRNVS 180

Query: 181 VF---EAPREKKRRKLRVVDKESRSRARARARERTRAKIVR-RLEISKCDFEGNPIGDCM 240
           ++   E PR KKRRKLR+VDKESR +ARARARERTRAK++R R EISK +FE NP+G C 
Sbjct: 181 LYRDQEVPRGKKRRKLRIVDKESRFKARARARERTRAKLIRGRFEISKSNFEVNPVGVCK 240

Query: 241 MGDVSEEIGTKNK-IFEF-----ERSQNERFLSSN-------VENSADDHVHLLPCS--S 300
           M DV EE  TK+K +  F      +++N   L SN        + S    +HLLP S  S
Sbjct: 241 MEDVIEESSTKSKSVANFPQNLGSKAKNSASLISNHCYDKRVSKESCSGEIHLLPGSGSS 300

Query: 301 MDMSSMSLDSTKASPAGLKLLELDEIDGVLIFYGE 309
           MDM ++SLD+ +ASPAGLKL ELDE+DGVLIFYGE
Sbjct: 301 MDMGTLSLDTMRASPAGLKLSELDEVDGVLIFYGE 311

[Close]

BLAST of Cp4.1LG09g02690 vs. ExPASy TrEMBL
Match: A0A0A0KT45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608320 PE=4 SV=1)

HSP 1 Score: 278 bits (710), Expect = 4.66e-88
Identity = 190/344 (55.23%), Postives = 222/344 (64.53%), Query Frame = 0


Query: 12  EHESHQLSLQFIDYYN-------FDPFLDE--DFILSQILYTQKQQFLDANNFEPEIGFE 71
           E + H  SLQ ID  N       F+PFLD+  +FIL  ILY+QK Q L ANN + +IG  
Sbjct: 47  EQQIHPPSLQLIDCSNYNYNNNYFNPFLDDHQEFILGHILYSQKHQLL-ANNSD-QIGVI 106

Query: 72  ISVNNTNEEITQKALP----------------QKKPISRKRSSN----KDRHSKICTSKG 131
            S NNTN                         QK PISRKRSS+    KDRHSKICTSKG
Sbjct: 107 ESSNNTNNNEAAATTTTHNYSSQNKAKTDHSSQKIPISRKRSSSVMKKKDRHSKICTSKG 166

Query: 132 PRDRRMRLSIEIARSFFDLQDMLGFDKASKTVEWLFAKSRSAIKELKEKFLSEGHNYNKS 191
           PRDRRMRLS+EIAR+FFDLQDMLGFDKASKTVEWLF KSRSAIKE+KEK+LSE  + +  
Sbjct: 167 PRDRRMRLSLEIARNFFDLQDMLGFDKASKTVEWLFTKSRSAIKEVKEKYLSEAKSKSSC 226

Query: 192 FDFSPLFRKVSVFEAPREKKRRK-LRVVDKESRSRARARARERTRAKIVRR-LEISKCDF 251
           +  + L   +     P  KKRR+ LR+VDKESR +ARARARERTRAK ++R LE+SK + 
Sbjct: 227 YSSTDLVTNLYKEVLPSGKKRRRRLRIVDKESRYKARARARERTRAKSIQRGLEVSKSNL 286

Query: 252 EGNPIGDCMMGDVSEEI-GTKNKIF-EFERSQNERFLSSNVENS-------------ADD 309
           EGNP G   MGD SEEI G K K        +NE+ L S  +NS               D
Sbjct: 287 EGNPDGVRKMGDFSEEISGNKRKTSTHVSLCENEKVLGSEEKNSDSLIMDKRVSKEICSD 346

[Close]

BLAST of Cp4.1LG09g02690 vs. TAIR 10
Match: AT1G68800.1 (TCP domain protein 12 )

HSP 1 Score: 125.6 bits (314), Expect = 7.1e-29
Identity = 88/203 (43.35%), Postives = 121/203 (59.61%), Query Frame = 0


Query: 16  HQLSLQFIDYYNFDPFLDEDFILSQILYTQKQQFLDANNFEPEIGF--EISVNNTNEEIT 75
           H  S  F    +F    DE F+++Q L   +QQ + AN  E    F  ++ +   NE+  
Sbjct: 39  HYSSPSFPFSSDFLESFDESFLINQFLL--QQQDVAANVVESPWKFCKKLELKKKNEKCV 98

Query: 76  QKALPQKKPISRKRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFDLQDMLGFDKASKT 135
             +  Q+    R+    +DRHSKICT++GPRDRRMRLS++IAR FFDLQDMLGFDKASKT
Sbjct: 99  DGSTSQEVQ-WRRTVKKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKT 158

Query: 136 VEWLFAKSRSAIKELKEKFLSE---GHNYNKSFDFSPLFRKVSVFEAPREKKRRKLRVVD 195
           +EWLF+KS+++IK+LKE+  +    G + +   D       + +  + R  K  +     
Sbjct: 159 IEWLFSKSKTSIKQLKERVAASEGGGKDEHLQVDEKEKDETLKLRVSKRRTKTMESSFKT 218

Query: 196 KESRSRARARARERTRAKIVRRL 214
           KESR RAR RARERT AK+  RL
Sbjct: 219 KESRERARKRARERTMAKMKMRL 238

[Close]

BLAST of Cp4.1LG09g02690 vs. TAIR 10
Match: AT1G67260.1 (TCP family transcription factor )

HSP 1 Score: 89.7 bits (221), Expect = 4.3e-18
Identity = 67/149 (44.97%), Postives = 89/149 (59.73%), Query Frame = 0


Query: 86  KRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFDLQDMLGFDKASKTVEWLFAKSRSAI 145
           K+   KDRHSKI T++G RDRR+RLSI IAR FFDLQDMLGFDKASKT++WL  KSR AI
Sbjct: 83  KKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAI 142

Query: 146 KEL---------------------KEKFLSEGHNYNKSFDF--SPLFRKVSVF----EAP 205
           KE+                     +E+   E  N +KSF +  SP + +  V     +A 
Sbjct: 143 KEVVQAKNLNNDDEDFGNIGGDVEQEEEKEEDDNGDKSFVYGLSPGYGEEEVVCEATKAG 202

Query: 206 REKKRRKLR-VVDKESRSRARARARERTR 207
             KK+ +LR +  K   ++AR +A+ERT+
Sbjct: 203 IRKKKSELRNISSKGLGAKARGKAKERTK 231

[Close]

BLAST of Cp4.1LG09g02690 vs. TAIR 10
Match: AT1G67260.2 (TCP family transcription factor )

HSP 1 Score: 89.7 bits (221), Expect = 4.3e-18
Identity = 67/149 (44.97%), Postives = 89/149 (59.73%), Query Frame = 0


Query: 86  KRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFDLQDMLGFDKASKTVEWLFAKSRSAI 145
           K+   KDRHSKI T++G RDRR+RLSI IAR FFDLQDMLGFDKASKT++WL  KSR AI
Sbjct: 83  KKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAI 142

Query: 146 KEL---------------------KEKFLSEGHNYNKSFDF--SPLFRKVSVF----EAP 205
           KE+                     +E+   E  N +KSF +  SP + +  V     +A 
Sbjct: 143 KEVVQAKNLNNDDEDFGNIGGDVEQEEEKEEDDNGDKSFVYGLSPGYGEEEVVCEATKAG 202

Query: 206 REKKRRKLR-VVDKESRSRARARARERTR 207
             KK+ +LR +  K   ++AR +A+ERT+
Sbjct: 203 IRKKKSELRNISSKGLGAKARGKAKERTK 231

[Close]

BLAST of Cp4.1LG09g02690 vs. TAIR 10
Match: AT1G53230.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 )

HSP 1 Score: 82.0 bits (201), Expect = 9.0e-16
Identity = 37/65 (56.92%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 86  KRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFDLQDMLGFDKASKTVEWLFAKSRSAI 145
           + +  KDRHSK+CT+KGPRDRR+RLS   A  F+D+QD LGFD+ SK V+WL  K++SAI
Sbjct: 45  RSTGRKDRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKSAI 104

Query: 146 KELKE 151
            +L +
Sbjct: 105 DDLAQ 109

[Close]

BLAST of Cp4.1LG09g02690 vs. TAIR 10
Match: AT3G15030.1 (TCP family transcription factor 4 )

HSP 1 Score: 82.0 bits (201), Expect = 9.0e-16
Identity = 37/65 (56.92%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 86  KRSSNKDRHSKICTSKGPRDRRMRLSIEIARSFFDLQDMLGFDKASKTVEWLFAKSRSAI 145
           + +  KDRHSK+CT+KGPRDRR+RLS   A  F+D+QD LGFD+ SK V+WL  K++++I
Sbjct: 41  RSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSI 100

Query: 146 KELKE 151
            EL E
Sbjct: 101 DELAE 105

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g02690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0AQW4	1.0e-27	43.35	Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1	[more]
Q9SBV6	7.7e-20	43.04	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum linkianum OX=102601 GN=...	[more]
O49250	7.7e-20	43.04	Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1	[more]
Q9SNW8	7.7e-20	41.80	Transcription factor DICHOTOMA OS=Antirrhinum majus OX=4151 GN=DICH PE=2 SV=1	[more]
Q9SBV9	1.0e-19	42.41	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum cirrhigerum OX=102600 G...	[more]

BLAST of Cp4.1LG09g02690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542921.1	2.42e-213	100.00	transcription factor TCP12-like [Cucurbita pepo subsp. pepo]	[more]
KAG6573996.1	8.29e-205	96.76	Transcription factor TCP12, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_022945400.1	9.31e-204	96.76	transcription factor TCP12-like [Cucurbita moschata]	[more]
XP_022968428.1	1.09e-202	96.44	transcription factor TCP12-like [Cucurbita maxima]	[more]
XP_038893072.1	5.34e-105	58.45	transcription factor TCP18-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG09g02690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G0U4	4.51e-204	96.76	transcription factor TCP12-like OS=Cucurbita moschata OX=3662 GN=LOC111449645 PE...	[more]
A0A6J1HXZ8	5.26e-203	96.44	transcription factor TCP12-like OS=Cucurbita maxima OX=3661 GN=LOC111467675 PE=4...	[more]
A0A6J1GZV4	1.18e-96	58.63	transcription factor CYCLOIDEA-like OS=Cucurbita moschata OX=3662 GN=LOC11145875...	[more]
A0A6J1J441	1.85e-95	59.70	transcription factor CYCLOIDEA-like OS=Cucurbita maxima OX=3661 GN=LOC111482452 ...	[more]
A0A0A0KT45	4.66e-88	55.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608320 PE=4 SV=1	[more]

BLAST of Cp4.1LG09g02690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68800.1	7.1e-29	43.35	TCP domain protein 12	[more]
AT1G67260.1	4.3e-18	44.97	TCP family transcription factor	[more]
AT1G67260.2	4.3e-18	44.97	TCP family transcription factor	[more]
AT1G53230.1	9.0e-16	56.92	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3	[more]
AT3G15030.1	9.0e-16	56.92	TCP family transcription factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 89..151 e-value: 3.2E-35 score: 122.0
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 90..148 score: 35.479622
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..104
None	No IPR available	PANTHER	PTHR31072:SF118	TRANSCRIPTION FACTOR TCP12	coord: 45..267
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 45..267
IPR017888	CYC/TB1, R domain	PROSITE	PS51370	R	coord: 191..208 score: 10.849162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g02690.1	Cp4.1LG09g02690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity