Cp4.1LG09g02070 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGCCTCTCTTTCTCCCTCTTCATCTTTTGCCACCAATGGGCAGCTCATCATGATGATCTTGATAGTTTTATTCCTCTTCGTCTCGTCTTCCACGGCCACTAGACTCTCCAATCATCCACCTTCCACCACCGTGCCAGAAGCTTCTCCGATCACCCCTCGTCACCACCCGCCTCGCCACAAACAACAGCTTCATCCTTGTGATGCTCTCACTCGCGAAAACTCACGTTCTTTATGTATTCACCTTCATAGAGTTTACCAACATCGCCTCCCTGTCTACCTTCCACCCCTGCCGCTGCCATTGCTGACACACAATCAAATTGACCCTCGATACGGCGTCGAGAAGAGACTCGTGCCATCCGGGCCAAACCCTCTTCACAACTGA ATGAAAGCCTCTCTTTCTCCCTCTTCATCTTTTGCCACCAATGGGCAGCTCATCATGATGATCTTGATAGTTTTATTCCTCTTCGTCTCGTCTTCCACGGCCACTAGACTCTCCAATCATCCACCTTCCACCACCGTGCCAGAAGCTTCTCCGATCACCCCTCGTCACCACCCGCCTCGCCACAAACAACAGCTTCATCCTTGTGATGCTCTCACTCGCGAAAACTCACGTTCTTTATGTATTCACCTTCATAGAGTTTACCAACATCGCCTCCCTGTCTACCTTCCACCCCTGCCGCTGCCATTGCTGACACACAATCAAATTGACCCTCGATACGGCGTCGAGAAGAGACTCGTGCCATCCGGGCCAAACCCTCTTCACAACTGA ATGAAAGCCTCTCTTTCTCCCTCTTCATCTTTTGCCACCAATGGGCAGCTCATCATGATGATCTTGATAGTTTTATTCCTCTTCGTCTCGTCTTCCACGGCCACTAGACTCTCCAATCATCCACCTTCCACCACCGTGCCAGAAGCTTCTCCGATCACCCCTCGTCACCACCCGCCTCGCCACAAACAACAGCTTCATCCTTGTGATGCTCTCACTCGCGAAAACTCACGTTCTTTATGTATTCACCTTCATAGAGTTTACCAACATCGCCTCCCTGTCTACCTTCCACCCCTGCCGCTGCCATTGCTGACACACAATCAAATTGACCCTCGATACGGCGTCGAGAAGAGACTCGTGCCATCCGGGCCAAACCCTCTTCACAACTGA MKASLSPSSSFATNGQLIMMILIVLFLFVSSSTATRLSNHPPSTTVPEASPITPRHHPPRHKQQLHPCDALTRENSRSLCIHLHRVYQHRLPVYLPPLPLPLLTHNQIDPRYGVEKRLVPSGPNPLHN Homology
BLAST of Cp4.1LG09g02070 vs. ExPASy Swiss-Prot
Match: Q4PSX1 (CLAVATA3/ESR (CLE)-related protein 10 OS=Arabidopsis thaliana OX=3702 GN=CLE10 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.8e-13 Identity = 49/120 (40.83%), Postives = 67/120 (55.83%), Query Frame = 0
BLAST of Cp4.1LG09g02070 vs. ExPASy Swiss-Prot
Match: Q9FZE4 (CLAVATA3/ESR (CLE)-related protein 9 OS=Arabidopsis thaliana OX=3702 GN=CLE9 PE=2 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 9.3e-12 Identity = 50/127 (39.37%), Postives = 69/127 (54.33%), Query Frame = 0
BLAST of Cp4.1LG09g02070 vs. ExPASy Swiss-Prot
Match: Q6NMF0 (CLAVATA3/ESR (CLE)-related protein 13 OS=Arabidopsis thaliana OX=3702 GN=CLE13 PE=2 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 2.9e-05 Identity = 20/23 (86.96%), Postives = 23/23 (100.00%), Query Frame = 0
BLAST of Cp4.1LG09g02070 vs. ExPASy Swiss-Prot
Match: Q29PU4 (CLAVATA3/ESR (CLE)-related protein 12 OS=Arabidopsis thaliana OX=3702 GN=CLE12 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.4e-04 Identity = 19/23 (82.61%), Postives = 22/23 (95.65%), Query Frame = 0
BLAST of Cp4.1LG09g02070 vs. NCBI nr
Match: KAG6574051.1 (CLAVATA3/ESR (CLE)-related protein 10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 261 bits (666), Expect = 8.95e-88 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
BLAST of Cp4.1LG09g02070 vs. NCBI nr
Match: KAG6601466.1 (CLAVATA3/ESR (CLE)-related protein 10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 166 bits (420), Expect = 2.57e-50 Identity = 92/130 (70.77%), Postives = 104/130 (80.00%), Query Frame = 0
BLAST of Cp4.1LG09g02070 vs. NCBI nr
Match: KAG7032247.1 (CLAVATA3/ESR (CLE)-related protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 166 bits (419), Expect = 3.65e-50 Identity = 92/130 (70.77%), Postives = 104/130 (80.00%), Query Frame = 0
BLAST of Cp4.1LG09g02070 vs. NCBI nr
Match: XP_038891849.1 (CLAVATA3/ESR (CLE)-related protein 10-like [Benincasa hispida]) HSP 1 Score: 162 bits (411), Expect = 5.32e-49 Identity = 92/133 (69.17%), Postives = 99/133 (74.44%), Query Frame = 0
BLAST of Cp4.1LG09g02070 vs. NCBI nr
Match: XP_022148995.1 (CLAVATA3/ESR (CLE)-related protein 9-like [Momordica charantia]) HSP 1 Score: 145 bits (366), Expect = 2.85e-42 Identity = 80/116 (68.97%), Postives = 92/116 (79.31%), Query Frame = 0
BLAST of Cp4.1LG09g02070 vs. ExPASy TrEMBL
Match: A0A6J1D4I0 (CLAVATA3/ESR (CLE)-related protein 9-like OS=Momordica charantia OX=3673 GN=LOC111017522 PE=3 SV=1) HSP 1 Score: 145 bits (366), Expect = 1.38e-42 Identity = 80/116 (68.97%), Postives = 92/116 (79.31%), Query Frame = 0
BLAST of Cp4.1LG09g02070 vs. ExPASy TrEMBL
Match: A0A5A7STL1 (Inactive protein FON2 SPARE1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G004730 PE=3 SV=1) HSP 1 Score: 145 bits (365), Expect = 2.15e-42 Identity = 79/124 (63.71%), Postives = 93/124 (75.00%), Query Frame = 0
BLAST of Cp4.1LG09g02070 vs. ExPASy TrEMBL
Match: A0A0A0KU71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606580 PE=3 SV=1) HSP 1 Score: 139 bits (351), Expect = 2.90e-40 Identity = 77/124 (62.10%), Postives = 91/124 (73.39%), Query Frame = 0
BLAST of Cp4.1LG09g02070 vs. ExPASy TrEMBL
Match: A0A7N2LAQ0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.63e-20 Identity = 60/124 (48.39%), Postives = 79/124 (63.71%), Query Frame = 0
BLAST of Cp4.1LG09g02070 vs. ExPASy TrEMBL
Match: A0A1Q3DGZ0 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_35182 PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.12e-19 Identity = 53/130 (40.77%), Postives = 80/130 (61.54%), Query Frame = 0
BLAST of Cp4.1LG09g02070 vs. TAIR 10
Match: AT1G69320.1 (CLAVATA3/ESR-RELATED 10 ) HSP 1 Score: 75.9 bits (185), Expect = 2.7e-14 Identity = 49/120 (40.83%), Postives = 67/120 (55.83%), Query Frame = 0
BLAST of Cp4.1LG09g02070 vs. TAIR 10
Match: AT1G26600.1 (CLAVATA3/ESR-RELATED 9 ) HSP 1 Score: 71.2 bits (173), Expect = 6.6e-13 Identity = 50/127 (39.37%), Postives = 69/127 (54.33%), Query Frame = 0
BLAST of Cp4.1LG09g02070 vs. TAIR 10
Match: AT1G73965.1 (CLAVATA3/ESR-RELATED 13 ) HSP 1 Score: 49.7 bits (117), Expect = 2.1e-06 Identity = 20/23 (86.96%), Postives = 23/23 (100.00%), Query Frame = 0
BLAST of Cp4.1LG09g02070 vs. TAIR 10
Match: AT1G68795.1 (CLAVATA3/ESR-RELATED 12 ) HSP 1 Score: 47.4 bits (111), Expect = 1.0e-05 Identity = 19/23 (82.61%), Postives = 22/23 (95.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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