Cp4.1LG09g01930 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g01930
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	GCK domain-containing protein
Location	Cp4.1LG09: 1121583 .. 1123559 (+)
RNA-Seq Expression	Cp4.1LG09g01930
Synteny	Cp4.1LG09g01930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCACTTCGAATGCGAAACTCCAAGGAGCAGAATCAAACGCTGCCGCCACTAAAACCCTGGAGGATGAACAACAATCGGGATCCCCAATTCCTCCCGAGGAAAAATCTTCCGGGGAACCAGATCAATCAGGAAAGATCCCCGAAAGTGGAGGGGAGGATCCTGAAGAGGAAGAGGAGGGGGAGTGTGGGTTTTGCTTGTTTATGAAAGGGGGCGGTTGCAAAGACAGCTTCGTAGAGTGGGAGAAATGCATCGAGGAGGCGGAGAAGAGCAAGGAGGATATTGTTGAGAAGTGCTTTGAAGTTACTGGGGCTCTGAAGAAGTGTATGGAGGCTCATGCGGATTATTACGAGCCGATTCTGAAGGCGGAGAAGATGGCGGAGGAGGAGGCGATTATCGAATTGGAGAAGGAAATGACTCCGGATGTAAATTCCAATGTCCTCGAGGTAAATGAGGGTTCTAACAATTCGGAAGAACAGAAGGCCTCTGCCGGTAGTAAGTGAAGTTCGTCGATGCTCGTTTGATCTAATTCCTGAGGCATAAACCCTTACTTTTTTAGAGTATTTAGTTTCTTGTCGATCTTTTGTCTTAGTGCACTGAAAATGGATCTTCAAATTATCATAGGAGAGGAGAGGTCTTACCTTACACCACTTATCATTGAATTCAAATTTCTGAATAATTGTTCAGGTGATTACGCCTGATATCATTTTTCCAAGAATCATCTGAATTCCCCCTTCCAACTATAGTTGGAAACATTGGCAAAAATCTGTACCTGTTACTTCATATATGAACTATGTATTCTCTTAATAACAGCTCCATTTATGAACTATAATACGTGAAACTTTCTAGTTTGTATTGTGAAATTTGTGTGGTTTAACTTTTCATCTGGGCTTTGTGGAGAATTAATTTGATCCTTTGTTGATTTCTTGTTTGTGGCATGGAAATTAAGCTTGTGGACTGTTGAAAAGAGGCCTGTTTGAAATCCAACGATGCTTTGTGATTTAGAATTGTAACTATATCTTAGTTATAAGTTTTACTCGTGTTCTTTCTATTTGTTTATCGCCTTCCACTTTCTAGGAAAGAGGTGAGAGATGCGTCCCATCTGAAAGGAGTCAGGATGTTACTGTTGGCTCGTTTGCTCTCCCTGGAGTGAATGATTAGAAGTTTGTGTCGAGAGAAAATAAGCTGCTATAACAGTGTGGTGTATGATTCATTATAGGATCCTTCTGATCGTTCTTCATGTTGGTTAGAGTTTGTGATTATTCAACAGGAATGATCAAGTTACCCTCCTTGCCATCAAAACTGTATGACTGAAGGAAAATTAACGATCATTCCGTGATGGCAAAATATTTGGACCTTATAAGTCAGCATTACATTAACATCAGGGAAAGCTTGAACAAGAACTTCCCTTCTTTTTCCAACATTAAGAACGATTTGAACCTTGTATGTTTAGTTACATAATTTGATATTTGTCAATTAGGTTGTCACTGTGAAGTATATCAAGAAGAATTATGTTTAATTCGAATAGAACCAGTACTATTTGTTGTGTAAATGCTGCCAATTGACAGTTATAGGATTGGAGACTTTCCTGATCGTTCAGAAAAGATATCTACGCTGGAATACTCTCGTGTTAATTCTTTAGATATACGAGGTTGATATAAATGAGATGGATCAATACAGCCACCCCACGAATGCCAGGAAGTGTGTCATAATTGGAGTTTGCTTTGATGCATTTCAATCCAATATTACATTTCAGATGTACACTGAAGCTAAGTGCAAGTGCATTACCCTTCAGGTCCATCTTATGCTAACTTTAAGGATGGTTTGAGACGGATGAAGGCTTTCGAACTCACGTATGTGCTTGTGTGCGTAACAAGACTTGGTTTTCATTTCAGCTGCAGAGTACAGATCCCGCTAGTGTCTACATATTCTACGGGGCCGTGCATAAACTTGGTATTGCTGAGCTGATCACTTGA

mRNA sequence

ATGTCCACTTCGAATGCGAAACTCCAAGGAGCAGAATCAAACGCTGCCGCCACTAAAACCCTGGAGGATGAACAACAATCGGGATCCCCAATTCCTCCCGAGGAAAAATCTTCCGGGGAACCAGATCAATCAGGAAAGATCCCCGAAAGTGGAGGGGAGGATCCTGAAGAGGAAGAGGAGGGGGAGTGTGGGTTTTGCTTGTTTATGAAAGGGGGCGGTTGCAAAGACAGCTTCGTAGAGTGGGAGAAATGCATCGAGGAGGCGGAGAAGAGCAAGGAGGATATTGTTGAGAAGTGCTTTGAAGTTACTGGGGCTCTGAAGAAGTGTATGGAGGCTCATGCGGATTATTACGAGCCGATTCTGAAGGCGGAGAAGATGGCGGAGGAGGAGGCGATTATCGAATTGGAGAAGGAAATGACTCCGGATGTAAATTCCAATGTCCTCGAGATATACGAGGTTGATATAAATGAGATGGATCAATACAGCCACCCCACGAATGCCAGGAAGTGTGTCATAATTGGAGTTTGCTTTGATGCATTTCAATCCAATATTACATTTCAGATGTACACTGAAGCTAAGTGCAAGTGCATTACCCTTCAGCTGCAGAGTACAGATCCCGCTAGTGTCTACATATTCTACGGGGCCGTGCATAAACTTGGTATTGCTGAGCTGATCACTTGA

Coding sequence (CDS)

ATGTCCACTTCGAATGCGAAACTCCAAGGAGCAGAATCAAACGCTGCCGCCACTAAAACCCTGGAGGATGAACAACAATCGGGATCCCCAATTCCTCCCGAGGAAAAATCTTCCGGGGAACCAGATCAATCAGGAAAGATCCCCGAAAGTGGAGGGGAGGATCCTGAAGAGGAAGAGGAGGGGGAGTGTGGGTTTTGCTTGTTTATGAAAGGGGGCGGTTGCAAAGACAGCTTCGTAGAGTGGGAGAAATGCATCGAGGAGGCGGAGAAGAGCAAGGAGGATATTGTTGAGAAGTGCTTTGAAGTTACTGGGGCTCTGAAGAAGTGTATGGAGGCTCATGCGGATTATTACGAGCCGATTCTGAAGGCGGAGAAGATGGCGGAGGAGGAGGCGATTATCGAATTGGAGAAGGAAATGACTCCGGATGTAAATTCCAATGTCCTCGAGATATACGAGGTTGATATAAATGAGATGGATCAATACAGCCACCCCACGAATGCCAGGAAGTGTGTCATAATTGGAGTTTGCTTTGATGCATTTCAATCCAATATTACATTTCAGATGTACACTGAAGCTAAGTGCAAGTGCATTACCCTTCAGCTGCAGAGTACAGATCCCGCTAGTGTCTACATATTCTACGGGGCCGTGCATAAACTTGGTATTGCTGAGCTGATCACTTGA

Protein sequence

MSTSNAKLQGAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKSKEDIVEKCFEVTGALKKCMEAHADYYEPILKAEKMAEEEAIIELEKEMTPDVNSNVLEIYEVDINEMDQYSHPTNARKCVIIGVCFDAFQSNITFQMYTEAKCKCITLQLQSTDPASVYIFYGAVHKLGIAELIT

Homology

[Close]

BLAST of Cp4.1LG09g01930 vs. NCBI nr
Match: KAG6574065.1 (hypothetical protein SDJN03_27952, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 322 bits (826), Expect = 2.01e-109
Identity = 181/235 (77.02%), Postives = 184/235 (78.30%), Query Frame = 0


Query: 1   MSTSNAKLQGAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEE 60
           MSTSN+KLQ AESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEE
Sbjct: 1   MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEE 60

Query: 61  GECGFCLFMKGGGCKDSFVEWEKCIEEAEKSKEDIVEKCFEVTGALKKCMEAHADYYEPI 120
           GECGFCLFMKGGGCKDSFVEWEKCIEEAEK+KEDIVEKCFEVTGALKKCMEAHADYYEPI
Sbjct: 61  GECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHADYYEPI 120

Query: 121 LKAEKMAEEEAIIELEKEMTPDVNSNVLEIYEVDINEMDQYSHPTNARKCVIIGVCFDAF 180
           LKAEKMAEEEAIIELEKEMTPD NSNVLE                               
Sbjct: 121 LKAEKMAEEEAIIELEKEMTPDANSNVLE------------------------------- 180

Query: 181 QSNITFQMYTEAKCKCITLQ---------LQSTDPASVYIFYGAVHKLGIAELIT 226
                  M TEAK KCITLQ         LQSTDPAS+YIFYGAVHKLGIAELIT
Sbjct: 181 -------MDTEAKFKCITLQVHLMLTLRMLQSTDPASIYIFYGAVHKLGIAELIT 197

[Close]

BLAST of Cp4.1LG09g01930 vs. NCBI nr
Match: XP_023542530.1 (uncharacterized protein LOC111802412 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 289 bits (739), Expect = 1.25e-96
Identity = 152/160 (95.00%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 1   MSTSNAKLQGAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEE 60
           MSTSNAKLQGAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEE
Sbjct: 1   MSTSNAKLQGAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEE 60

Query: 61  GECGFCLFMKGGGCKDSFVEWEKCIEEAEKSKEDIVEKCFEVTGALKKCMEAHADYYEPI 120
           GECGFCLFMKGGGCKDSFVEWEKCIEEAEKSKEDIVEKCFEVTGALKKCMEAHADYYEPI
Sbjct: 61  GECGFCLFMKGGGCKDSFVEWEKCIEEAEKSKEDIVEKCFEVTGALKKCMEAHADYYEPI 120

Query: 121 LKAEKMAEEEAIIELEKEMTPDVNSNVLEIYEVDINEMDQ 160
           LKAEKMAEEEAIIELEKEMTPDVNSNVLE+ E   N  +Q
Sbjct: 121 LKAEKMAEEEAIIELEKEMTPDVNSNVLEVNEGSNNSEEQ 160

[Close]

BLAST of Cp4.1LG09g01930 vs. NCBI nr
Match: KAG7013125.1 (hypothetical protein SDJN02_25881, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 281 bits (720), Expect = 9.79e-94
Identity = 148/160 (92.50%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MSTSNAKLQGAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEE 60
           MSTSN+KLQ AESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEE
Sbjct: 1   MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEE 60

Query: 61  GECGFCLFMKGGGCKDSFVEWEKCIEEAEKSKEDIVEKCFEVTGALKKCMEAHADYYEPI 120
           GECGFCLFMKGGGCKDSFVEWEKCIEEAEK+KEDIVEKCFEVTGALKKCMEAHADYYEPI
Sbjct: 61  GECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHADYYEPI 120

Query: 121 LKAEKMAEEEAIIELEKEMTPDVNSNVLEIYEVDINEMDQ 160
           LKAEKMAEEEAIIELEKEMTPD NSNVLE+ E   N  +Q
Sbjct: 121 LKAEKMAEEEAIIELEKEMTPDENSNVLEVNEGSNNSEEQ 160

[Close]

BLAST of Cp4.1LG09g01930 vs. NCBI nr
Match: XP_022968451.1 (uncharacterized protein LOC111467693 [Cucurbita maxima])

HSP 1 Score: 281 bits (719), Expect = 1.39e-93
Identity = 147/160 (91.88%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MSTSNAKLQGAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEE 60
           MSTSN+KLQ AESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEE
Sbjct: 1   MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEE 60

Query: 61  GECGFCLFMKGGGCKDSFVEWEKCIEEAEKSKEDIVEKCFEVTGALKKCMEAHADYYEPI 120
           GECGFCLFMKGGGCKDSFVEWEKCIEEAEK+KEDIVEKCFEVTGALKKCMEAHADYYEPI
Sbjct: 61  GECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHADYYEPI 120

Query: 121 LKAEKMAEEEAIIELEKEMTPDVNSNVLEIYEVDINEMDQ 160
           LKAEKMAEEEAI+ELEKEMTPD NSNVLE+ E   N  +Q
Sbjct: 121 LKAEKMAEEEAIMELEKEMTPDANSNVLEVNEGSNNSEEQ 160

[Close]

BLAST of Cp4.1LG09g01930 vs. NCBI nr
Match: XP_022945633.1 (uncharacterized protein LOC111449816 [Cucurbita moschata])

HSP 1 Score: 279 bits (714), Expect = 8.02e-93
Identity = 147/160 (91.88%), Postives = 151/160 (94.38%), Query Frame = 0


Query: 1   MSTSNAKLQGAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEE 60
           MSTSN+KLQ AESNAAATKTLEDEQQSGSPIPPEEKSSGE DQSGKIPESGGEDPEEEEE
Sbjct: 1   MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGESDQSGKIPESGGEDPEEEEE 60

Query: 61  GECGFCLFMKGGGCKDSFVEWEKCIEEAEKSKEDIVEKCFEVTGALKKCMEAHADYYEPI 120
           GECGFCLFMKGGGCKDSFVEWEKCIEEAEK+KEDIVEKCFEVTGALKKCMEAHADYYEPI
Sbjct: 61  GECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHADYYEPI 120

Query: 121 LKAEKMAEEEAIIELEKEMTPDVNSNVLEIYEVDINEMDQ 160
           LKAEKMAEEEAIIELEKEMTPD NSNVLE+ E   N  +Q
Sbjct: 121 LKAEKMAEEEAIIELEKEMTPDANSNVLEVNEGSNNSEEQ 160

[Close]

BLAST of Cp4.1LG09g01930 vs. ExPASy TrEMBL
Match: A0A6J1HUW5 (uncharacterized protein LOC111467693 OS=Cucurbita maxima OX=3661 GN=LOC111467693 PE=4 SV=1)

HSP 1 Score: 281 bits (719), Expect = 6.73e-94
Identity = 147/160 (91.88%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MSTSNAKLQGAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEE 60
           MSTSN+KLQ AESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEE
Sbjct: 1   MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEE 60

Query: 61  GECGFCLFMKGGGCKDSFVEWEKCIEEAEKSKEDIVEKCFEVTGALKKCMEAHADYYEPI 120
           GECGFCLFMKGGGCKDSFVEWEKCIEEAEK+KEDIVEKCFEVTGALKKCMEAHADYYEPI
Sbjct: 61  GECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHADYYEPI 120

Query: 121 LKAEKMAEEEAIIELEKEMTPDVNSNVLEIYEVDINEMDQ 160
           LKAEKMAEEEAI+ELEKEMTPD NSNVLE+ E   N  +Q
Sbjct: 121 LKAEKMAEEEAIMELEKEMTPDANSNVLEVNEGSNNSEEQ 160

[Close]

BLAST of Cp4.1LG09g01930 vs. ExPASy TrEMBL
Match: A0A6J1G1F8 (uncharacterized protein LOC111449816 OS=Cucurbita moschata OX=3662 GN=LOC111449816 PE=4 SV=1)

HSP 1 Score: 279 bits (714), Expect = 3.88e-93
Identity = 147/160 (91.88%), Postives = 151/160 (94.38%), Query Frame = 0


Query: 1   MSTSNAKLQGAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEE 60
           MSTSN+KLQ AESNAAATKTLEDEQQSGSPIPPEEKSSGE DQSGKIPESGGEDPEEEEE
Sbjct: 1   MSTSNSKLQDAESNAAATKTLEDEQQSGSPIPPEEKSSGESDQSGKIPESGGEDPEEEEE 60

Query: 61  GECGFCLFMKGGGCKDSFVEWEKCIEEAEKSKEDIVEKCFEVTGALKKCMEAHADYYEPI 120
           GECGFCLFMKGGGCKDSFVEWEKCIEEAEK+KEDIVEKCFEVTGALKKCMEAHADYYEPI
Sbjct: 61  GECGFCLFMKGGGCKDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHADYYEPI 120

Query: 121 LKAEKMAEEEAIIELEKEMTPDVNSNVLEIYEVDINEMDQ 160
           LKAEKMAEEEAIIELEKEMTPD NSNVLE+ E   N  +Q
Sbjct: 121 LKAEKMAEEEAIIELEKEMTPDANSNVLEVNEGSNNSEEQ 160

[Close]

BLAST of Cp4.1LG09g01930 vs. ExPASy TrEMBL
Match: A0A0A0KU46 (GCK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G606380 PE=4 SV=1)

HSP 1 Score: 214 bits (544), Expect = 2.56e-67
Identity = 119/146 (81.51%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 1   MSTSNAKLQGAESNAAATKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGG-----EDP 60
           MSTS +KLQ AESNAAATKTLED+ QS +P   EEKSS E   SGKI ESGG     ED 
Sbjct: 1   MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDI 60

Query: 61  EEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKSKEDIVEKCFEVTGALKKCMEAHAD 120
           EEEEEGECGFCLFMKGGGC+DSF+ WEKCIEEAEK+KEDIVEKCFEVTGALKKCMEAH D
Sbjct: 61  EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHPD 120

Query: 121 YYEPILKAEKMAEEEAIIELEKEMTP 141
           YYEPILKAEKMAEEEAIIELEKE TP
Sbjct: 121 YYEPILKAEKMAEEEAIIELEKETTP 146

[Close]

BLAST of Cp4.1LG09g01930 vs. ExPASy TrEMBL
Match: A0A6J1K434 (uncharacterized protein LOC111492108 OS=Cucurbita maxima OX=3661 GN=LOC111492108 PE=4 SV=1)

HSP 1 Score: 209 bits (533), Expect = 1.95e-65
Identity = 119/162 (73.46%), Postives = 131/162 (80.86%), Query Frame = 0


Query: 1   MSTSNAKLQGAESNAAAT--KTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDP--- 60
           MSTS +KLQ AESNAAA   KT ED+QQ G+P   EEKS  E  QSGKI ESGGED    
Sbjct: 1   MSTSESKLQDAESNAAAAAAKTPEDQQQLGAPNHSEEKSPQESVQSGKISESGGEDEGGE 60

Query: 61  --EEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKSKEDIVEKCFEVTGALKKCMEAH 120
             +EEEEGECGFCLFMKGGGC+DSFVEWEKCIEEAEK+KEDIVEKCFEVTGALKKCMEAH
Sbjct: 61  DLDEEEEGECGFCLFMKGGGCRDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAH 120

Query: 121 ADYYEPILKAEKMAEEEAIIELEKEMTPDVNSNVLEIYEVDI 155
           ADYYEPILKAEKMAE EAIIELEKE TP+      +  ++++
Sbjct: 121 ADYYEPILKAEKMAENEAIIELEKESTPNATQQHTDSKDLEV 162

[Close]

BLAST of Cp4.1LG09g01930 vs. ExPASy TrEMBL
Match: A0A6J1GZI9 (transcription elongation factor spt5 OS=Cucurbita moschata OX=3662 GN=LOC111458916 PE=4 SV=1)

HSP 1 Score: 206 bits (523), Expect = 2.66e-64
Identity = 117/150 (78.00%), Postives = 124/150 (82.67%), Query Frame = 0


Query: 1   MSTSNAKLQGAESNAAAT----KTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDP- 60
           MSTS +KLQ AESNAAA     KT ED+QQ G+P   EEKS  E  QSGKI ESGGED  
Sbjct: 1   MSTSESKLQDAESNAAAAAAAAKTPEDQQQLGAPNHSEEKSPEESGQSGKISESGGEDEG 60

Query: 61  ----EEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKSKEDIVEKCFEVTGALKKCME 120
               +EEEE ECGFCLFMKGGGC+DSFVEWEKCIEEAEK+KEDIVEKCFE+TGALKKCME
Sbjct: 61  GEDLDEEEEEECGFCLFMKGGGCRDSFVEWEKCIEEAEKNKEDIVEKCFEITGALKKCME 120

Query: 121 AHADYYEPILKAEKMAEEEAIIELEKEMTP 141
           AHADYYEPILKAEKMAE EAIIELEKE TP
Sbjct: 121 AHADYYEPILKAEKMAENEAIIELEKESTP 150

[Close]

BLAST of Cp4.1LG09g01930 vs. TAIR 10
Match: AT1G14060.1 (GCK domain-containing protein )

HSP 1 Score: 129.0 bits (323), Expect = 4.7e-30
Identity = 75/154 (48.70%), Postives = 90/154 (58.44%), Query Frame = 0


Query: 4   SNAKLQGAESNAAATKTLEDEQQSGSPIPPEE--------KSSGEPDQSGKIPESGGEDP 63
           S+ K Q  E    A      +    +P P EE        +   + +   K  E GG D 
Sbjct: 15  SDPKSQNNEEAPPAKSEKLGDASPSTPAPSEELGDSSTVWRDPEDSESDEKPEEGGGGDA 74

Query: 64  EEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKSKEDIVEKCFEVTGALKKCMEAHAD 123
           + EEEGECGFCLFMKGGGCKDSFV WE+C+E AEK+KEDIV  C EVT  LKKCM+ H+D
Sbjct: 75  DGEEEGECGFCLFMKGGGCKDSFVAWEECVEAAEKNKEDIVTNCMEVTSMLKKCMDEHSD 134

Query: 124 YYEPILKAEKMAEEEAIIELEKEMTPDVNSNVLE 150
           YY+PIL AEK AE E   ELE E   +    + E
Sbjct: 135 YYQPILAAEKAAEAEVKKELEAEKKKEEEEKISE 168

[Close]

BLAST of Cp4.1LG09g01930 vs. TAIR 10
Match: AT5G57570.1 (GCK domain-containing protein )

HSP 1 Score: 75.1 bits (183), Expect = 8.1e-14
Identity = 40/80 (50.00%), Postives = 50/80 (62.50%), Query Frame = 0


Query: 49  ESGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKS-KEDIVEKCFEVTGALK 108
           E+G    EEEE GEC  C F+KGG CK+SF+  E+C++EAE+S +E    KC EV    K
Sbjct: 39  ETGEGKGEEEESGECRLCRFIKGGECKESFIALEQCVDEAEESGEESDFTKCKEVRAKFK 98

Query: 109 KCMEAHADYYEPILKAEKMA 128
            CM  +  YYEPIL  E  A
Sbjct: 99  TCMYENPVYYEPILAGEARA 118

[Close]

BLAST of Cp4.1LG09g01930 vs. TAIR 10
Match: AT5G02210.1 (GCK domain-containing protein )

HSP 1 Score: 72.4 bits (176), Expect = 5.2e-13
Identity = 44/88 (50.00%), Postives = 54/88 (61.36%), Query Frame = 0


Query: 56  EEEEEGECGFCLFMKGGGCKDSFVEW-EKC---IEEAEKSKEDIVEKCFEVTGALKKCME 115
           E  EE +  F  FMKGGGCK+SF  W + C    EEAEK+K D+V KC  + G   KCM+
Sbjct: 71  EINEEEDQKFVEFMKGGGCKESFTAWNDDCNFTEEEAEKNK-DLVTKCAGLFGTFSKCMD 130

Query: 116 AHADYYEPILKAEKMAEEEAIIELEKEM 140
            H+DYY PIL  +K  EE     LEKE+
Sbjct: 131 THSDYYHPILAVKKTTEE----HLEKEL 153

[Close]

BLAST of Cp4.1LG09g01930 vs. TAIR 10
Match: AT5G57640.1 (GCK domain-containing protein )

HSP 1 Score: 72.4 bits (176), Expect = 5.2e-13
Identity = 49/124 (39.52%), Postives = 67/124 (54.03%), Query Frame = 0


Query: 18  TKTLEDEQQSGSPIPPEEKSSGEPDQSGKIPESGGEDPEEEEEGECGFCLFMKGGGCKDS 77
           +KTL ++Q          +  G+ ++S  + E    D  EEE GEC  C F+KGG CK++
Sbjct: 41  SKTLSEDQVDVKESKTLIEDQGDEEESKTLDED--LDETEEESGECPLCQFIKGGECKEA 100

Query: 78  FVEWEKCIEEAEKSKEDIVEKCFEVTGALKKCMEAHADYYEPILKAEKMAEEEAIIEL-- 137
           F E E C +EA+K+ ED V KC E     K CM  +  YYEP+L  E  A  + + EL  
Sbjct: 101 FTELENCCDEAKKNNEDHVSKCKEARLIFKTCMYDNPVYYEPLLAGEARAMAKMLSELLN 160

Query: 138 -EKE 139
            EKE
Sbjct: 161 AEKE 162

[Close]

BLAST of Cp4.1LG09g01930 vs. TAIR 10
Match: AT1G14048.1 (GCK domain-containing protein )

HSP 1 Score: 53.1 bits (126), Expect = 3.3e-07
Identity = 37/91 (40.66%), Postives = 48/91 (52.75%), Query Frame = 0


Query: 50  SGGEDPEEEEEGECGFCLFMKGGGCKDSFVEWEKCIEEAEKSKEDIVEKCFEVTGALKKC 109
           S  E  EEEE+GE  F  FM+GGGCK+ F +WE C +EA             V   + KC
Sbjct: 18  SPNEVREEEEKGEV-FSAFMRGGGCKEPFTDWEDCTDEATN---------VGVFAMMTKC 77

Query: 110 ME-AHADYYEPILKAEKMAEEEAIIELEKEM 140
           M     D+Y P L A+K A+E     +EKE+
Sbjct: 78  MVWMLTDHYRPFLAAKKTAQE----HIEKEL 94

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g01930 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG09g01930 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6574065.1	2.01e-109	77.02	hypothetical protein SDJN03_27952, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023542530.1	1.25e-96	95.00	uncharacterized protein LOC111802412 [Cucurbita pepo subsp. pepo]	[more]
KAG7013125.1	9.79e-94	92.50	hypothetical protein SDJN02_25881, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022968451.1	1.39e-93	91.88	uncharacterized protein LOC111467693 [Cucurbita maxima]	[more]
XP_022945633.1	8.02e-93	91.88	uncharacterized protein LOC111449816 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG09g01930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HUW5	6.73e-94	91.88	uncharacterized protein LOC111467693 OS=Cucurbita maxima OX=3661 GN=LOC111467693...	[more]
A0A6J1G1F8	3.88e-93	91.88	uncharacterized protein LOC111449816 OS=Cucurbita moschata OX=3662 GN=LOC1114498...	[more]
A0A0A0KU46	2.56e-67	81.51	GCK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G606380 PE=4 SV...	[more]
A0A6J1K434	1.95e-65	73.46	uncharacterized protein LOC111492108 OS=Cucurbita maxima OX=3661 GN=LOC111492108...	[more]
A0A6J1GZI9	2.66e-64	78.00	transcription elongation factor spt5 OS=Cucurbita moschata OX=3662 GN=LOC1114589...	[more]

BLAST of Cp4.1LG09g01930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14060.1	4.7e-30	48.70	GCK domain-containing protein	[more]
AT5G57570.1	8.1e-14	50.00	GCK domain-containing protein	[more]
AT5G02210.1	5.2e-13	50.00	GCK domain-containing protein	[more]
AT5G57640.1	5.2e-13	39.52	GCK domain-containing protein	[more]
AT1G14048.1	3.3e-07	40.66	GCK domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM01227	GCK_2	coord: 61..135 e-value: 8.8E-40 score: 148.2
None	No IPR available	GENE3D	1.10.287.2900		coord: 43..121 e-value: 2.2E-7 score: 32.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR34357	F7A19.14 PROTEIN-RELATED	coord: 11..140
None	No IPR available	PANTHER	PTHR34357:SF2	F7A19.14 PROTEIN-RELATED	coord: 11..140
IPR012891	GCK	PFAM	PF07802	GCK	coord: 61..131 e-value: 7.5E-35 score: 119.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g01930.1	Cp4.1LG09g01930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
molecular_function	GO:0003746	translation elongation factor activity