Cp4.1LG09g01870 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g01870
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor TCP15-like
Location	Cp4.1LG09: 997754 .. 998869 (-)
RNA-Seq Expression	Cp4.1LG09g01870
Synteny	Cp4.1LG09g01870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACTGGTAGCCAAAAAAAAGAGACAAACAGTCTACGCTTATGATCATGGATGCTGAAAATGGGATCCGAAGACCTAATTTTCCATTACAATTGTTGGAGAAAAAAGAAGAACACCACCCTTGTTCCACCTCCGCCAACAACGGAACATCAACCACTACTCCAATTCTTCAATCCTCTTCTTCTTCTTCACCCAACAAGCCACCTCCCAAAAGGGCCACCACCAAAGATCGCCACACCAAAGTCGACGGCCGCGGTCGCCGTATTCGTATGCCTGCTCTTTGCGCTGCTAGGGTTTTTCAGCTCACTAGAGAACTCGGCCACAAGTCCGACGGCGAAACAATTGAGTGGCTTCTACAGCAAGCCGAGCCCGCCGTAATTGCCGCTACCGGAACCGGTACAATTCCGGCGAATTTCACTTCACTAAATATTTCCCTTCGTAGCTCCGGCTCCACCATCTCCGCTCCTTCTCACTTCCGAACGAGCTATTTCAACCCGACCCAATTCGCCGTTAGAACAAGATCCGATCTTTGGGATCGGAGTAACGCTCTCGTGGATGATTCTTCTACATTCTTGAATTTCAACTCTTCGAACTATGTCAAGCATGATCAGGGTGGAATTGATTTGACTGAGGCGGGAAAAAAACGGCGGCCGGAGCAGTCGGAATCTTCATCGGAAAATCCAATCGGAAATTATTTAGTTCAATCGAATTCCGGGTCGATTCCAGCGAGTCACGGCACGGCGGTGCCAACGACATTTTGGATGATGACGAATCCGAGTAATCCAGCGAGTGATCCGATGTGGACATTCCCGTCGATGAGTAGCAGCAGTATGTTCAGAGGAGCAGCTGCAGCTAGTGGCAGTGGCGGGTTTCATTTCATGAATCTTCCACCGCCAATGGCTCTTTTGCCAACTGCCCAACCGCTGGGCTCCGGGATCGGTGGCAGTGGCGGCGGTCCAGCCACCGACACCCACTTGGGGATGTTAGCAGCGCTGAGTGCTTATAGAACGATGCCGGGATTGTCAGTGTCAGAGTCTCCGACAAGAGGAGTGGCGGCTGTTCATCAAAGTGGGAATGAAGCTCATGATTCCACTTCAAATCGCGATCAATCTTAG

mRNA sequence

ATGTACTGCTCCGGCTCCACCATCTCCGCTCCTTCTCACTTCCGAACGAGCTATTTCAACCCGACCCAATTCGCCGTTAGAACAAGATCCGATCTTTGGGATCGGAGTAACGCTCTCGTGGATGATTCTTCTACATTCTTGAATTTCAACTCTTCGAACTATGTCAAGCATGATCAGGGTGGAATTGATTTGACTGAGGCGGGAAAAAAACGGCGGCCGGAGCAGTCGGAATCTTCATCGGAAAATCCAATCGGAAATTATTTAGTTCAATCGAATTCCGGGTCGATTCCAGCGAGTCACGGCACGGCGGTGCCAACGACATTTTGGATGATGACGAATCCGAGTAATCCAGCGAGTGATCCGATGTGGACATTCCCGTCGATGAGTAGCAGCAGTATGTTCAGAGGAGCAGCTGCAGCTAGTGGCAGTGGCGGGTTTCATTTCATGAATCTTCCACCGCCAATGGCTCTTTTGCCAACTGCCCAACCGCTGGGCTCCGGGATCGGTGGCAGTGGCGGCGGTCCAGCCACCGACACCCACTTGGGGATGTTAGCAGCGCTGAGTGCTTATAGAACGATGCCGGGATTGTCAGTGTCAGAGTCTCCGACAAGAGGAGTGGCGGCTGTTCATCAAAGTGGGAATGAAGCTCATGATTCCACTTCAAATCGCGATCAATCTTAG

Coding sequence (CDS)

ATGTACTGCTCCGGCTCCACCATCTCCGCTCCTTCTCACTTCCGAACGAGCTATTTCAACCCGACCCAATTCGCCGTTAGAACAAGATCCGATCTTTGGGATCGGAGTAACGCTCTCGTGGATGATTCTTCTACATTCTTGAATTTCAACTCTTCGAACTATGTCAAGCATGATCAGGGTGGAATTGATTTGACTGAGGCGGGAAAAAAACGGCGGCCGGAGCAGTCGGAATCTTCATCGGAAAATCCAATCGGAAATTATTTAGTTCAATCGAATTCCGGGTCGATTCCAGCGAGTCACGGCACGGCGGTGCCAACGACATTTTGGATGATGACGAATCCGAGTAATCCAGCGAGTGATCCGATGTGGACATTCCCGTCGATGAGTAGCAGCAGTATGTTCAGAGGAGCAGCTGCAGCTAGTGGCAGTGGCGGGTTTCATTTCATGAATCTTCCACCGCCAATGGCTCTTTTGCCAACTGCCCAACCGCTGGGCTCCGGGATCGGTGGCAGTGGCGGCGGTCCAGCCACCGACACCCACTTGGGGATGTTAGCAGCGCTGAGTGCTTATAGAACGATGCCGGGATTGTCAGTGTCAGAGTCTCCGACAAGAGGAGTGGCGGCTGTTCATCAAAGTGGGAATGAAGCTCATGATTCCACTTCAAATCGCGATCAATCTTAG

Protein sequence

MYCSGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSNALVDDSSTFLNFNSSNYVKHDQGGIDLTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMWTFPSMSSSSMFRGAAAASGSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDTHLGMLAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS

Homology

[Close]

BLAST of Cp4.1LG09g01870 vs. ExPASy Swiss-Prot
Match: Q9C9L2 (Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-09
Identity = 56/166 (33.73%), Postives = 78/166 (46.99%), Query Frame = 0


Query: 69  KKRRPEQSESSSE----NPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMWT 128
           K      S SSS+    N +GNYLVQS +GS+P S   A    FW     S   +  +W 
Sbjct: 164 KNESHSSSSSSSQLLDHNQMGNYLVQSTAGSLPTSQSPAT-APFW----SSGDNTQNLWA 223

Query: 129 F------PSMSSSSMFRGAAAASGSG-GFHFMNLPPPMALLPTAQPLGSGIGGSGGGPAT 188
           F        + +  ++   +  SG G G H MN   P+AL  + QPL SG GG GGG   
Sbjct: 224 FNINPHHSGVVAGDVYNPNSGGSGGGSGVHLMNFAAPIALF-SGQPLASGYGGGGGGGGE 283

Query: 189 DTHLGMLAAL-SAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSN 223
            +H G+LAAL +AYR +       +  +     H   ++   STS+
Sbjct: 284 HSHYGVLAALNAAYRPVAETGNHNNNQQNRDGDHHHNHQEDGSTSH 323

[Close]

BLAST of Cp4.1LG09g01870 vs. NCBI nr
Match: XP_023541248.1 (transcription factor TCP15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 440 bits (1132), Expect = 1.43e-153
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 4   SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSNALVDDSSTFLNFNSSNYVKHDQGGID 63
           SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSNALVDDSSTFLNFNSSNYVKHDQGGID
Sbjct: 135 SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSNALVDDSSTFLNFNSSNYVKHDQGGID 194

Query: 64  LTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMW 123
           LTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMW
Sbjct: 195 LTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMW 254

Query: 124 TFPSMSSSSMFRGAAAASGSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDTHLGM 183
           TFPSMSSSSMFRGAAAASGSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDTHLGM
Sbjct: 255 TFPSMSSSSMFRGAAAASGSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDTHLGM 314

Query: 184 LAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS 226
           LAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS
Sbjct: 315 LAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS 357

[Close]

BLAST of Cp4.1LG09g01870 vs. NCBI nr
Match: XP_022944951.1 (transcription factor TCP15-like [Cucurbita moschata] >KAG6574092.1 Transcription factor TCP14, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013150.1 Transcription factor TCP14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 439 bits (1128), Expect = 5.81e-153
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 4   SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSNALVDDSSTFLNFNSSNYVKHDQGGID 63
           SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSNALVDDSSTFLNFNSSNYVKHDQGGID
Sbjct: 135 SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSNALVDDSSTFLNFNSSNYVKHDQGGID 194

Query: 64  LTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMW 123
           LTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMW
Sbjct: 195 LTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMW 254

Query: 124 TFPSMSSSSMFRGAAAASGSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDTHLGM 183
           TFPSMSSSSMFRGAAAA GSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDTHLGM
Sbjct: 255 TFPSMSSSSMFRGAAAAGGSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDTHLGM 314

Query: 184 LAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS 226
           LAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS
Sbjct: 315 LAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS 357

[Close]

BLAST of Cp4.1LG09g01870 vs. NCBI nr
Match: XP_022968072.1 (transcription factor TCP15-like [Cucurbita maxima])

HSP 1 Score: 436 bits (1120), Expect = 9.59e-152
Identity = 220/223 (98.65%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 4   SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSNALVDDSSTFLNFNSSNYVKHDQGGID 63
           SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSN+LVDDSSTFLNFNS NYVKHDQGGID
Sbjct: 135 SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSNSLVDDSSTFLNFNSPNYVKHDQGGID 194

Query: 64  LTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMW 123
           LTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMW
Sbjct: 195 LTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMW 254

Query: 124 TFPSMSSSSMFRGAAAASGSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDTHLGM 183
           TFPSMSSSSMFRGAAAA GSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDTHLGM
Sbjct: 255 TFPSMSSSSMFRGAAAAGGSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDTHLGM 314

Query: 184 LAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS 226
           LAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS
Sbjct: 315 LAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS 357

[Close]

BLAST of Cp4.1LG09g01870 vs. NCBI nr
Match: XP_022987562.1 (transcription factor TCP15-like [Cucurbita maxima])

HSP 1 Score: 369 bits (946), Expect = 8.38e-125
Identity = 186/233 (79.83%), Postives = 201/233 (86.27%), Query Frame = 0


Query: 4   SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSN-------ALVDDSSTFLNFNSSNYV- 63
           SGSTI APSH RTSYF+PTQFAVRTRSDLWDRSN        LVDDSSTFLNFNS NY+ 
Sbjct: 158 SGSTILAPSHLRTSYFSPTQFAVRTRSDLWDRSNNNNNNNNTLVDDSSTFLNFNSPNYIN 217

Query: 64  --KHDQGGIDLTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTN 123
             KHDQGGID+T+AGKKRRPE SESSSENP+GNYLVQS++GSIPA H T VP TFWM+TN
Sbjct: 218 AFKHDQGGIDVTDAGKKRRPEHSESSSENPVGNYLVQSSTGSIPAGHSTPVPATFWMVTN 277

Query: 124 PSNPASDPMWTFPSMSSSSMFRGAAAASGSGGFHFMNLPPPMALLPTAQPLGSGIGGSGG 183
           PSN ASDPMWTFPS+S+SSMFRG +   G GGFHFMNLPPPMALLPT Q +GSGIGG  G
Sbjct: 278 PSNQASDPMWTFPSVSNSSMFRGGSGGGGGGGFHFMNLPPPMALLPTGQQVGSGIGGGSG 337

Query: 184 GPATDTHLGMLAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS 226
           GPATDTHLGMLAALSAYRT+PG+S+SESPTRG A VHQ GNEAHDSTSNRDQS
Sbjct: 338 GPATDTHLGMLAALSAYRTIPGVSISESPTRGAAGVHQGGNEAHDSTSNRDQS 390

[Close]

BLAST of Cp4.1LG09g01870 vs. NCBI nr
Match: KAG6601425.1 (Transcription factor TCP15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 362 bits (928), Expect = 3.71e-122
Identity = 186/243 (76.54%), Postives = 202/243 (83.13%), Query Frame = 0


Query: 4   SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSN--------------ALVDDSSTFLNF 63
           SGST+ APSH RTSYF+PTQFAVRTRSDLWDRSN               LVDDSSTF NF
Sbjct: 142 SGSTVLAPSHLRTSYFSPTQFAVRTRSDLWDRSNNNNNHNHNHNNNNNTLVDDSSTFFNF 201

Query: 64  NSSNYV---KHDQGGIDLTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPT 123
           NS NY+   KHDQGGID+T+AGKKRRPE SESSSENP+GNYLVQS++GSIPASH T VP 
Sbjct: 202 NSPNYINAFKHDQGGIDVTDAGKKRRPENSESSSENPVGNYLVQSSTGSIPASHSTPVPA 261

Query: 124 TFWMMTNPSNPASDPMWTFPSMSSSSMFRGAAAASGSGG---FHFMNLPPPMALLPTAQP 183
           TFWM+TNPSN ASDPMWTFPS+S+SSMFRG +   G GG   FHFMNLPPPMALLPT Q 
Sbjct: 262 TFWMVTNPSNQASDPMWTFPSVSNSSMFRGGSGGGGGGGGGGFHFMNLPPPMALLPTGQQ 321

Query: 184 LGSGIGGSGGGPATDTHLGMLAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNR 226
           +GSGIGG  GGPATDTHLGMLAALSAYRT+PG+S+SESPTRG AAVHQ GNEAHDSTSNR
Sbjct: 322 VGSGIGGGSGGPATDTHLGMLAALSAYRTIPGVSISESPTRGAAAVHQGGNEAHDSTSNR 381

[Close]

BLAST of Cp4.1LG09g01870 vs. ExPASy TrEMBL
Match: A0A6J1FZH4 (transcription factor TCP15-like OS=Cucurbita moschata OX=3662 GN=LOC111449334 PE=4 SV=1)

HSP 1 Score: 439 bits (1128), Expect = 2.81e-153
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 4   SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSNALVDDSSTFLNFNSSNYVKHDQGGID 63
           SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSNALVDDSSTFLNFNSSNYVKHDQGGID
Sbjct: 135 SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSNALVDDSSTFLNFNSSNYVKHDQGGID 194

Query: 64  LTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMW 123
           LTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMW
Sbjct: 195 LTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMW 254

Query: 124 TFPSMSSSSMFRGAAAASGSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDTHLGM 183
           TFPSMSSSSMFRGAAAA GSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDTHLGM
Sbjct: 255 TFPSMSSSSMFRGAAAAGGSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDTHLGM 314

Query: 184 LAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS 226
           LAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS
Sbjct: 315 LAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS 357

[Close]

BLAST of Cp4.1LG09g01870 vs. ExPASy TrEMBL
Match: A0A6J1HSI7 (transcription factor TCP15-like OS=Cucurbita maxima OX=3661 GN=LOC111467418 PE=4 SV=1)

HSP 1 Score: 436 bits (1120), Expect = 4.64e-152
Identity = 220/223 (98.65%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 4   SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSNALVDDSSTFLNFNSSNYVKHDQGGID 63
           SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSN+LVDDSSTFLNFNS NYVKHDQGGID
Sbjct: 135 SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSNSLVDDSSTFLNFNSPNYVKHDQGGID 194

Query: 64  LTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMW 123
           LTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMW
Sbjct: 195 LTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMW 254

Query: 124 TFPSMSSSSMFRGAAAASGSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDTHLGM 183
           TFPSMSSSSMFRGAAAA GSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDTHLGM
Sbjct: 255 TFPSMSSSSMFRGAAAAGGSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDTHLGM 314

Query: 184 LAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS 226
           LAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS
Sbjct: 315 LAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS 357

[Close]

BLAST of Cp4.1LG09g01870 vs. ExPASy TrEMBL
Match: A0A6J1JAP9 (transcription factor TCP15-like OS=Cucurbita maxima OX=3661 GN=LOC111485089 PE=4 SV=1)

HSP 1 Score: 369 bits (946), Expect = 4.06e-125
Identity = 186/233 (79.83%), Postives = 201/233 (86.27%), Query Frame = 0


Query: 4   SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSN-------ALVDDSSTFLNFNSSNYV- 63
           SGSTI APSH RTSYF+PTQFAVRTRSDLWDRSN        LVDDSSTFLNFNS NY+ 
Sbjct: 158 SGSTILAPSHLRTSYFSPTQFAVRTRSDLWDRSNNNNNNNNTLVDDSSTFLNFNSPNYIN 217

Query: 64  --KHDQGGIDLTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTN 123
             KHDQGGID+T+AGKKRRPE SESSSENP+GNYLVQS++GSIPA H T VP TFWM+TN
Sbjct: 218 AFKHDQGGIDVTDAGKKRRPEHSESSSENPVGNYLVQSSTGSIPAGHSTPVPATFWMVTN 277

Query: 124 PSNPASDPMWTFPSMSSSSMFRGAAAASGSGGFHFMNLPPPMALLPTAQPLGSGIGGSGG 183
           PSN ASDPMWTFPS+S+SSMFRG +   G GGFHFMNLPPPMALLPT Q +GSGIGG  G
Sbjct: 278 PSNQASDPMWTFPSVSNSSMFRGGSGGGGGGGFHFMNLPPPMALLPTGQQVGSGIGGGSG 337

Query: 184 GPATDTHLGMLAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS 226
           GPATDTHLGMLAALSAYRT+PG+S+SESPTRG A VHQ GNEAHDSTSNRDQS
Sbjct: 338 GPATDTHLGMLAALSAYRTIPGVSISESPTRGAAGVHQGGNEAHDSTSNRDQS 390

[Close]

BLAST of Cp4.1LG09g01870 vs. ExPASy TrEMBL
Match: A0A6J1H0W2 (transcription factor TCP15-like OS=Cucurbita moschata OX=3662 GN=LOC111458919 PE=4 SV=1)

HSP 1 Score: 357 bits (917), Expect = 6.45e-121
Identity = 184/241 (76.35%), Postives = 201/241 (83.40%), Query Frame = 0


Query: 4   SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSN------------ALVDDSSTFLNFNS 63
           SGST+ APSH RTSYF+PTQFAVRTRSDLWDRSN             LVDDSSTF NFNS
Sbjct: 136 SGSTVLAPSHLRTSYFSPTQFAVRTRSDLWDRSNNNNNHNHNNNNNTLVDDSSTFFNFNS 195

Query: 64  SNYV---KHDQGGIDLTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTF 123
            NY+   KHDQGGID+T+AGKKRRPE SESSSENP+GNYLVQS++GSIPASH T VP TF
Sbjct: 196 PNYINAFKHDQGGIDVTDAGKKRRPENSESSSENPVGNYLVQSSTGSIPASHSTPVPATF 255

Query: 124 WMMTNPSNPASDPMWTFPSMSSSSMFRGAAAASGSGG---FHFMNLPPPMALLPTAQPLG 183
           WM+TNPSN ASDPMWTFPS+S+SSMFRG +   G GG   FHFMNLPPPMALLPT Q +G
Sbjct: 256 WMVTNPSNQASDPMWTFPSVSNSSMFRGGSGGGGGGGGGGFHFMNLPPPMALLPTGQQVG 315

Query: 184 SGIGGSGGGPATDTHLGMLAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQ 226
           SGIGG  G PATDTHLGMLAALSAYRT+PG+S+SESPTRG AAVH+ GNEAHDSTSNRDQ
Sbjct: 316 SGIGGGSGCPATDTHLGMLAALSAYRTIPGVSISESPTRGAAAVHRGGNEAHDSTSNRDQ 375

[Close]

BLAST of Cp4.1LG09g01870 vs. ExPASy TrEMBL
Match: A0A0A0KVX2 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605000 PE=4 SV=1)

HSP 1 Score: 300 bits (767), Expect = 2.71e-98
Identity = 161/217 (74.19%), Postives = 177/217 (81.57%), Query Frame = 0


Query: 4   SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSNA----LVDDSSTFLNFNSSNYV---K 63
           SGSTISAPSH RTSYF+PTQFAVRTRSDLWDR+N     LVDDSSTFLNFNSSNYV   K
Sbjct: 147 SGSTISAPSHLRTSYFSPTQFAVRTRSDLWDRTNNHNHNLVDDSSTFLNFNSSNYVNVFK 206

Query: 64  HDQGGIDLTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSN 123
            DQGGID+ E GKKRR EQSESSSEN    Y+VQ+++GSIPAS  + +P TFWM+TNP+N
Sbjct: 207 QDQGGIDVVETGKKRRSEQSESSSEN----YMVQTSTGSIPASQSSQLPATFWMVTNPTN 266

Query: 124 PASDPMWTFPSMSSSSMFRGAAAASGSGG---FHFMNLPPPMALLPTAQPLGSGIGGSGG 183
             SD MWTFPS+ +SSM RGA    G GG   FHFMNLPPPMALLP+ Q LG+GIGG GG
Sbjct: 267 QGSDQMWTFPSVGNSSMLRGAGGGGGGGGGGGFHFMNLPPPMALLPSGQQLGTGIGGGGG 326

Query: 184 GPATDTHLGMLAALSAYRT-MPGLSVSESPTRGVAAV 209
           GPATD+HLGMLAALSAYRT MPGLSVSESPTRGV  V
Sbjct: 327 GPATDSHLGMLAALSAYRTTMPGLSVSESPTRGVGGV 359

[Close]

BLAST of Cp4.1LG09g01870 vs. TAIR 10
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-10
Identity = 56/166 (33.73%), Postives = 78/166 (46.99%), Query Frame = 0


Query: 69  KKRRPEQSESSSE----NPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASDPMWT 128
           K      S SSS+    N +GNYLVQS +GS+P S   A    FW     S   +  +W 
Sbjct: 164 KNESHSSSSSSSQLLDHNQMGNYLVQSTAGSLPTSQSPAT-APFW----SSGDNTQNLWA 223

Query: 129 F------PSMSSSSMFRGAAAASGSG-GFHFMNLPPPMALLPTAQPLGSGIGGSGGGPAT 188
           F        + +  ++   +  SG G G H MN   P+AL  + QPL SG GG GGG   
Sbjct: 224 FNINPHHSGVVAGDVYNPNSGGSGGGSGVHLMNFAAPIALF-SGQPLASGYGGGGGGGGE 283

Query: 189 DTHLGMLAAL-SAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSN 223
            +H G+LAAL +AYR +       +  +     H   ++   STS+
Sbjct: 284 HSHYGVLAALNAAYRPVAETGNHNNNQQNRDGDHHHNHQEDGSTSH 323

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g01870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9L2	2.6e-09	33.73	Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1	[more]

BLAST of Cp4.1LG09g01870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541248.1	1.43e-153	100.00	transcription factor TCP15-like [Cucurbita pepo subsp. pepo]	[more]
XP_022944951.1	5.81e-153	99.55	transcription factor TCP15-like [Cucurbita moschata] >KAG6574092.1 Transcription...	[more]
XP_022968072.1	9.59e-152	98.65	transcription factor TCP15-like [Cucurbita maxima]	[more]
XP_022987562.1	8.38e-125	79.83	transcription factor TCP15-like [Cucurbita maxima]	[more]
KAG6601425.1	3.71e-122	76.54	Transcription factor TCP15, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG09g01870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZH4	2.81e-153	99.55	transcription factor TCP15-like OS=Cucurbita moschata OX=3662 GN=LOC111449334 PE...	[more]
A0A6J1HSI7	4.64e-152	98.65	transcription factor TCP15-like OS=Cucurbita maxima OX=3661 GN=LOC111467418 PE=4...	[more]
A0A6J1JAP9	4.06e-125	79.83	transcription factor TCP15-like OS=Cucurbita maxima OX=3661 GN=LOC111485089 PE=4...	[more]
A0A6J1H0W2	6.45e-121	76.35	transcription factor TCP15-like OS=Cucurbita moschata OX=3662 GN=LOC111458919 PE...	[more]
A0A0A0KVX2	2.71e-98	74.19	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605000 PE=4 SV...	[more]

BLAST of Cp4.1LG09g01870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69690.1	1.9e-10	33.73	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..93
None	No IPR available	PANTHER	PTHR31072:SF170	TRANSCRIPTION FACTOR TCP23	coord: 3..207
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 3..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g01870.1	Cp4.1LG09g01870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding