Cp4.1LG09g01700 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGATTAAACGAGGCGTAACATTAAATCACAGCCGTACATCATGCTGGGCCTTGTTTTGACTCGTTGGCAGACTGCCACGTGGATGGCCTTCCAAACCCTTTCTCTTCCACGACGATATTTCCTCAAGTTCGTGTTGGAAAGGGAATCTTAAGAAACGACGTAGTTTGATTCTTCTCGATCTCCATCCTCTCTCTTCCTGGATTCGTACTGCTTCCACAGATTTCTCTTTGTTTTGTCTGCAAACCCTAGCTTGAATCCCCTTTCCATTTCCTCCTTCCTTCGTTGATTCCGGTGTTGTTGTTTCATTTCATTCCCGAAAACGCTAGTGTGGGAAGCTTCTTCCCCCTTCTCCTGAATTGGATTTGGGAATCCCTTCCTGCTGTTTCTCAGTCTGCCGGAGAATTGTTCGGGAGCTGCGATTTGGGGTTTTGAGTCCTAATGCACTTCCGGCATCTATTGGAGTTTAGTCTTTGATTGCTTCTAGCTCCTTTTCCAAGATGGGTTTTGTATTCTCCGATCAAATGTTGGGTACTTTTGTGCCAATTGTGGTTTACTGGTTGTATTCTGGGATTTATATTCTACTGGGCTCATTTGAGAACTACCGGTTGCACTCTAAGGAAGATGAGCTAGAGAAGAACGTAGTGTCCAAGAGCACTGTGGTCAGAGGCGTTTTGCTTCAACAGACTATTCAGGCAATCGTTGCGATCCTCTTGTTTAAGGTACGCATTGCATGATGTCAGTTCCGAGTTCATTTAATTTCAATCTGTGTATGATTTTGATTATGTTTTGTGAATTTGTCATGTCCCCTGTATAAAGTTTGAATCAATTGACTGTTATTAGTTGAAAGAGGCGGCGCTGAGTCCACTTTGATGCGTATTTATCGCTGTATTTTGTTAACTCCCCCCCGGTCCCCCACTTGCTTTAAGTTCTCATGGATTTGTAGACACCATTTATTGATGCTTTAAGACTGTCACTTCAATTGTTTTTGTTGAGAAGTAATCGTACAAGTGCTTAGCTGCGCGAAATTTATTACTGATCTGAAACTTCATCAGTTCTTTTATACTTTACAAGCTGACAGCATTAGTAGGTGGAGCGTTGGACCTTTGTACTTCCTAGTCTTGCTGACCAAGATTGGTTGATGTATTATTTTCTGAGAATTCCTTTTGTTATTTCTGAATCATCTTTTTTTATTTCACCTGGTTAGGTCACTTTCCATGAAAATATTCCATCCATGATCCTCAAACTACTCCACAATTCTTAAAAAAAAAAACGAGTAACCTCCTACTTCGAGGTTCAGGTTTAGGAGAGGTGTGCTTTTAGCTCTATATGCATGTAGCTCTTCACTACACTAATTGCGTAAGTGAAGTGGGTGCTAGGTGGGTGTGTGCATATCCCGACATGTTGAGGTTGGTAGTGGGCGGGTCTAAAGGCAAGAGCATGGTCCAGCCATTGATCACGAGTCAACAACCAAACAAAGAAGTCAAGTAAGATAAAGTAAGATGAGCATTTTCTATTGGAAATGCTCGTCTAACCTGTGGTCTCTTAGGAAACTATATAATTGTAAAAACTCAACCATTGGGTCTTCACCAAATTTGATACTTAGGATGTGCGGTTGATGGTGCTTAAGTTTTTATCCTCTTTCCCTTCATGTCTTGTGATTTGGGTGGTTGAGGGAAAAGAAAGAAGCGAACTGAAAGTAGAAGGAATCGCTTAAAAAATTCGGCCTGTATGGACAGATATCATTTAGCGAAGACATTGTTGGTCTAAGTTGTTAGGCTCATGGTCTTTTCTGCACCCTTTAATTTGTATCTGGACTACATCTATGATTACTCGGGATCGCTATGGTCAAATTCTAACCCTTCACATTGAGAGTATCTTATTCAAATTCTAACCCTTCACATTGAGAGTATCTTATTGTTCTGCAGTTCGCCATTATTAGTTTCCTAAGTGTAGCATTTTGGCCCTCATTTCTTAAATACACATTTCTCTCACTGTTCCAGTACTGGCTGAAAGTGTCCTGTAGGCTGTAGCCAATACAATCAAGAAACAGAAATTGGTTTGTTGAGGTCAGTTTTTCGAGTTAGAAGACCACCGATGCATACCTGAAGATAAAGCGGTTGAAGAACTTTCTTGAATGATGCCAAAATAGGAACATTAGGCTGTAAATCCTGCAATTAATTTGTGATATGCTGGATGCAATCATTTCTATTTGAAAGCTGGACAATTACTTGTTCCATTCGTTTACCAATCTTCATCTAATGTCTAATGTAATGGACATATAATTTGTTCACTAAACTTAGAACTCATAATGTGTCGTTTTTGTTGTACATTTTATTTACCACAGCTGAGTCGATTTGGCATAGGAAAGTTGATTTGGCATTGACTGTCGCTGACAATTGTGTTTGTTCTTAACTTATCACGTAGGTGACTGGAAATGATGGTGAGGTTGCTACAGCTCCAAAATCTTGGCTAACAATCATCGTTCAGTTTATTGTTGCGATGCTCGTGTTGGACACTTGGCAATACTTCATTCACAGATACATGCATCAGAATAAGTTCCTATACAAGCACATCCATTCCCATCATCACCGGTTGGTTGTACCTTTTGCATTCGGAGCTTTATACAACCATCCATTGGAGGGTCTTCTCCTCGACACAATCGGTGGAGCTTTATCTTTCCTCGTCTCTGGGATGTCATCTCGAGTCTCCATCTTTTTCTTTTCATTCGCCACCATCAAAACAGTAGATGACCATTGTGGATTATGGATTCCCGGGAACCCTTTCCATGTGTTCTTCAGAAACAATTCTGCATATCATGATTTCCACCATCAGCTATATGGCAGTAAGTATAACTTCTCCCAGCCATTTTTTGTTATGTGGGATAGAATATTTGGGACCTATATGCCTTACTCAGAGAAGAGAGCCGGGGCTGGTTCGGAAGCGCGAGTTAAGGAAGATTAGTTGTTCCATAGCAAGCATATATTATTTTCCTCACTGTTACTTTTTTTTCCCCTATCTATCTCTCTCACTGTTAGCCAGCCACCACACTGCTAAATTTGTATCATACGCCTACTCGTGTCTTACACTCTTGTTAGTATTATTTCCTCGTCGTTTCATAGCTGATTCGTGTTGTGATTTGAACCTTTTCTTTTTCTTGTACCTACTCCTTGTGAACAGAGAACCTCTGATTTTTCCTTCTTTGGATTTGGTTAAACGTTACTTATCCCTTTCCCAGCTGCATTCTGAACTATCTTTCTTCTACTGAAATAGATTGCTCTGATATGGTGAAGCTGCAAATCTAGGCTAAACTTTGTTTCTAGGAAGATTTAGCACTTATTTGGTTCACATGGTATGATTAGTAGAACAAAGACAATGATATAATTTATGCATAAACATAGGAACTATATGATAATGTATTATTTAATGTCCAGTTGCTTCATTGAAACTATACATAACAGCAGGTAAA GGATTAAACGAGGCGTAACATTAAATCACAGCCGTACATCATGCTGGGCCTTGTTTTGACTCGTTGGCAGACTGCCACGTGGATGGCCTTCCAAACCCTTTCTCTTCCACGACGATATTTCCTCAAGTTCGTGTTGGAAAGGGAATCTTAAGAAACGACGTAGTTTGATTCTTCTCGATCTCCATCCTCTCTCTTCCTGGATTCGTACTGCTTCCACAGATTTCTCTTTGTTTTGTCTGCAAACCCTAGCTTGAATCCCCTTTCCATTTCCTCCTTCCTTCGTTGATTCCGGTGTTGTTGTTTCATTTCATTCCCGAAAACGCTAGTGTGGGAAGCTTCTTCCCCCTTCTCCTGAATTGGATTTGGGAATCCCTTCCTGCTGTTTCTCAGTCTGCCGGAGAATTGTTCGGGAGCTGCGATTTGGGGTTTTGAGTCCTAATGCACTTCCGGCATCTATTGGAGTTTAGTCTTTGATTGCTTCTAGCTCCTTTTCCAAGATGGGTTTTGTATTCTCCGATCAAATGTTGGGTACTTTTGTGCCAATTGTGGTTTACTGGTTGTATTCTGGGATTTATATTCTACTGGGCTCATTTGAGAACTACCGGTTGCACTCTAAGGAAGATGAGCTAGAGAAGAACGTAGTGTCCAAGAGCACTGTGGTCAGAGGCGTTTTGCTTCAACAGACTATTCAGGCAATCGTTGCGATCCTCTTGTTTAAGGTGACTGGAAATGATGGTGAGGTTGCTACAGCTCCAAAATCTTGGCTAACAATCATCGTTCAGTTTATTGTTGCGATGCTCGTGTTGGACACTTGGCAATACTTCATTCACAGATACATGCATCAGAATAAGTTCCTATACAAGCACATCCATTCCCATCATCACCGGTTGGTTGTACCTTTTGCATTCGGAGCTTTATACAACCATCCATTGGAGGGTCTTCTCCTCGACACAATCGGTGGAGCTTTATCTTTCCTCGTCTCTGGGATGTCATCTCGAGTCTCCATCTTTTTCTTTTCATTCGCCACCATCAAAACAGTAGATGACCATTGTGGATTATGGATTCCCGGGAACCCTTTCCATGTGTTCTTCAGAAACAATTCTGCATATCATGATTTCCACCATCAGCTATATGGCAGTAAGTATAACTTCTCCCAGCCATTTTTTGTTATGTGGGATAGAATATTTGGGACCTATATGCCTTACTCAGAGAAGAGAGCCGGGGCTGGTTCGGAAGCGCGAGTTAAGGAAGATTAGTTGTTCCATAGCAAGCATATATTATTTTCCTCACTGTTACTTTTTTTTCCCCTATCTATCTCTCTCACTGTTAGCCAGCCACCACACTGCTAAATTTGTATCATACGCCTACTCGTGTCTTACACTCTTGTTAGTATTATTTCCTCGTCGTTTCATAGCTGATTCGTGTTGTGATTTGAACCTTTTCTTTTTCTTGTACCTACTCCTTGTGAACAGAGAACCTCTGATTTTTCCTTCTTTGGATTTGGTTAAACGTTACTTATCCCTTTCCCAGCTGCATTCTGAACTATCTTTCTTCTACTGAAATAGATTGCTCTGATATGGTGAAGCTGCAAATCTAGGCTAAACTTTGTTTCTAGGAAGATTTAGCACTTATTTGGTTCACATGGTATGATTAGTAGAACAAAGACAATGATATAATTTATGCATAAACATAGGAACTATATGATAATGTATTATTTAATGTCCAGTTGCTTCATTGAAACTATACATAACAGCAGGTAAA ATGGGTTTTGTATTCTCCGATCAAATGTTGGGTACTTTTGTGCCAATTGTGGTTTACTGGTTGTATTCTGGGATTTATATTCTACTGGGCTCATTTGAGAACTACCGGTTGCACTCTAAGGAAGATGAGCTAGAGAAGAACGTAGTGTCCAAGAGCACTGTGGTCAGAGGCGTTTTGCTTCAACAGACTATTCAGGCAATCGTTGCGATCCTCTTGTTTAAGGTGACTGGAAATGATGGTGAGGTTGCTACAGCTCCAAAATCTTGGCTAACAATCATCGTTCAGTTTATTGTTGCGATGCTCGTGTTGGACACTTGGCAATACTTCATTCACAGATACATGCATCAGAATAAGTTCCTATACAAGCACATCCATTCCCATCATCACCGGTTGGTTGTACCTTTTGCATTCGGAGCTTTATACAACCATCCATTGGAGGGTCTTCTCCTCGACACAATCGGTGGAGCTTTATCTTTCCTCGTCTCTGGGATGTCATCTCGAGTCTCCATCTTTTTCTTTTCATTCGCCACCATCAAAACAGTAGATGACCATTGTGGATTATGGATTCCCGGGAACCCTTTCCATGTGTTCTTCAGAAACAATTCTGCATATCATGATTTCCACCATCAGCTATATGGCAGTAAGTATAACTTCTCCCAGCCATTTTTTGTTATGTGGGATAGAATATTTGGGACCTATATGCCTTACTCAGAGAAGAGAGCCGGGGCTGGTTCGGAAGCGCGAGTTAAGGAAGATTAG MGFVFSDQMLGTFVPIVVYWLYSGIYILLGSFENYRLHSKEDELEKNVVSKSTVVRGVLLQQTIQAIVAILLFKVTGNDGEVATAPKSWLTIIVQFIVAMLVLDTWQYFIHRYMHQNKFLYKHIHSHHHRLVVPFAFGALYNHPLEGLLLDTIGGALSFLVSGMSSRVSIFFFSFATIKTVDDHCGLWIPGNPFHVFFRNNSAYHDFHHQLYGSKYNFSQPFFVMWDRIFGTYMPYSEKRAGAGSEARVKED Homology
BLAST of Cp4.1LG09g01700 vs. ExPASy Swiss-Prot
Match: Q9AST3 (Sphinganine C4-monooxygenase 2 OS=Arabidopsis thaliana OX=3702 GN=SBH2 PE=1 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 1.5e-109 Identity = 191/250 (76.40%), Postives = 219/250 (87.60%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. ExPASy Swiss-Prot
Match: Q8VYI1 (Sphinganine C4-monooxygenase 1 OS=Arabidopsis thaliana OX=3702 GN=SBH1 PE=1 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 8.0e-108 Identity = 191/250 (76.40%), Postives = 217/250 (86.80%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. ExPASy Swiss-Prot
Match: B8B4W4 (Very-long-chain aldehyde decarbonylase GL1-9 OS=Oryza sativa subsp. indica OX=39946 GN=GL1-9 PE=3 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 6.0e-87 Identity = 160/255 (62.75%), Postives = 197/255 (77.25%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. ExPASy Swiss-Prot
Match: Q0D4G3 (Very-long-chain aldehyde decarbonylase GL1-9 OS=Oryza sativa subsp. japonica OX=39947 GN=GL1-9 PE=2 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 6.0e-87 Identity = 160/255 (62.75%), Postives = 197/255 (77.25%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. ExPASy Swiss-Prot
Match: O94298 (Sphingolipid C4-hydroxylase sur2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sur2 PE=3 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 6.0e-55 Identity = 111/253 (43.87%), Postives = 147/253 (58.10%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. NCBI nr
Match: XP_023542394.1 (sphinganine C4-monooxygenase 2-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 508 bits (1307), Expect = 2.04e-181 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. NCBI nr
Match: KAG6574090.1 (Sphinganine C4-monooxygenase 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 506 bits (1302), Expect = 1.18e-180 Identity = 249/252 (98.81%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. NCBI nr
Match: KAG7013149.1 (Sphinganine C4-monooxygenase 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 505 bits (1300), Expect = 2.38e-180 Identity = 249/252 (98.81%), Postives = 251/252 (99.60%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. NCBI nr
Match: XP_022968087.1 (sphinganine C4-monooxygenase 2-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 505 bits (1300), Expect = 2.38e-180 Identity = 249/252 (98.81%), Postives = 251/252 (99.60%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. NCBI nr
Match: XP_022944953.1 (sphinganine C4-monooxygenase 2-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 504 bits (1297), Expect = 6.82e-180 Identity = 248/252 (98.41%), Postives = 251/252 (99.60%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. ExPASy TrEMBL
Match: A0A6J1HSN9 (sphinganine C4-monooxygenase 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467426 PE=3 SV=1) HSP 1 Score: 505 bits (1300), Expect = 1.15e-180 Identity = 249/252 (98.81%), Postives = 251/252 (99.60%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. ExPASy TrEMBL
Match: A0A6J1FZG3 (sphinganine C4-monooxygenase 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449337 PE=3 SV=1) HSP 1 Score: 504 bits (1297), Expect = 3.30e-180 Identity = 248/252 (98.41%), Postives = 251/252 (99.60%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. ExPASy TrEMBL
Match: A0A0A0KQL6 (Fatty acid hydroxylase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605020 PE=3 SV=1) HSP 1 Score: 461 bits (1186), Expect = 2.86e-163 Identity = 229/253 (90.51%), Postives = 238/253 (94.07%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. ExPASy TrEMBL
Match: A0A5A7SZ77 (Sphinganine C4-monooxygenase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00520 PE=3 SV=1) HSP 1 Score: 459 bits (1182), Expect = 1.16e-162 Identity = 229/253 (90.51%), Postives = 237/253 (93.68%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. ExPASy TrEMBL
Match: A0A6J1DD01 (sphinganine C4-monooxygenase 2-like OS=Momordica charantia OX=3673 GN=LOC111019225 PE=3 SV=1) HSP 1 Score: 459 bits (1182), Expect = 1.16e-162 Identity = 228/253 (90.12%), Postives = 237/253 (93.68%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. TAIR 10
Match: AT1G14290.1 (sphingoid base hydroxylase 2 ) HSP 1 Score: 397.1 bits (1019), Expect = 1.0e-110 Identity = 191/250 (76.40%), Postives = 219/250 (87.60%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. TAIR 10
Match: AT1G69640.1 (sphingoid base hydroxylase 1 ) HSP 1 Score: 391.3 bits (1004), Expect = 5.7e-109 Identity = 191/250 (76.40%), Postives = 217/250 (86.80%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. TAIR 10
Match: AT2G29390.3 (sterol 4-alpha-methyl-oxidase 2-2 ) HSP 1 Score: 74.3 bits (181), Expect = 1.5e-13 Identity = 72/249 (28.92%), Postives = 112/249 (44.98%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. TAIR 10
Match: AT2G29390.2 (sterol 4-alpha-methyl-oxidase 2-2 ) HSP 1 Score: 74.3 bits (181), Expect = 1.5e-13 Identity = 72/249 (28.92%), Postives = 112/249 (44.98%), Query Frame = 0
BLAST of Cp4.1LG09g01700 vs. TAIR 10
Match: AT2G29390.1 (sterol 4-alpha-methyl-oxidase 2-2 ) HSP 1 Score: 72.0 bits (175), Expect = 7.6e-13 Identity = 74/261 (28.35%), Postives = 115/261 (44.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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