Cp4.1LG09g01220 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g01220
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor bHLH118
Location	Cp4.1LG09: 744772 .. 745786 (-)
RNA-Seq Expression	Cp4.1LG09g01220
Synteny	Cp4.1LG09g01220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCCTTTACAGAAATGCGAAGACAAGTGCTTCCAGATTTCGTTTAATCCTCACCAACACATAATCCCTGAAGATCTCATCTTTGGGCCTCAAGTGTCAGTGGAAGCTCATGATGATAGTAACAACAACAATAATAATGGTGTCAACAATTTGGGAACTCGTGGAAGAAGGAAGCTGCTTCAGAATTTGGATCATGGCGTTTCGGATCAAGATCATCAAATCAAGTTGATGCATCGAGAAAGGGAGAGGCAAAGAAGACAAGAAATGGGTGCTCTTTATATGTCTCTAAGAACCCTACTTCCTCTTGAATTTATCAAGGTGATTGCTATCAATTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGATTTTGTATGAACCCACTTAGATCCGGTTGTTTTATCCCAAAATTAAGCAACCCTTTTGATGAATTTTTGTTTACATCGCTAAAAATCGTAGCTTTTTGGTGTTGTTCTTGGAGTTTCTAAAAGGGTTTTTTTTTTGGTGTTGATTTCAGGGGAAAAGGGCGATATCGGATCAAATGAATGGGGCGGTGAATTATATAAAGTATCAGAAGAAGAAAATCAAAGAGTTTGAAGCTAAAAGAGATGAATTGAAGAAGCTGTATAATAGTTCAAATGACTTAGAAATATCAAGAGGACAGACTCCAATTTGCAGCTTCAAAGTTAGCTCCTTTGATGGAGGACTTGAAATCTTGATCATAACAAATGATTTCCATGGATTTCCCCTTTCAAGAATCTTGAAAGTAATTGTTGATCAAGGGTTGGATGTCGTCCGCTGTGGTTCGACCACGATGAACGACAAATCAATGCACACCATTCAAATGGAGGTAAGATTATTGCTTCGAGAGTCT

mRNA sequence

ATGTTCCCTTTACAGAAATGCGAAGACAAGTGCTTCCAGATTTCGTTTAATCCTCACCAACACATAATCCCTGAAGATCTCATCTTTGGGCCTCAAGTGTCAGTGGAAGCTCATGATGATAGTAACAACAACAATAATAATGGTGTCAACAATTTGGGAACTCGTGGAAGAAGGAAGCTGCTTCAGAATTTGGATCATGGCGTTTCGGATCAAGATCATCAAATCAAGTTGATGCATCGAGAAAGGGAGAGGCAAAGAAGACAAGAAATGGGTGCTCTTTATATGTCTCTAAGAACCCTACTTCCTCTTGAATTTATCAAGGGGAAAAGGGCGATATCGGATCAAATGAATGGGGCGGTGAATTATATAAAGTATCAGAAGAAGAAAATCAAAGAGTTTGAAGCTAAAAGAGATGAATTGAAGAAGCTGTATAATAGTTCAAATGACTTAGAAATATCAAGAGGACAGACTCCAATTTGCAGCTTCAAAGTTAGCTCCTTTGATGGAGGACTTGAAATCTTGATCATAACAAATGATTTCCATGGATTTCCCCTTTCAAGAATCTTGAAAGTAATTGTTGATCAAGGGTTGGATGTCGTCCGCTGTGGTTCGACCACGATGAACGACAAATCAATGCACACCATTCAAATGGAGGTAAGATTATTGCTTCGAGAGTCT

Coding sequence (CDS)

ATGTTCCCTTTACAGAAATGCGAAGACAAGTGCTTCCAGATTTCGTTTAATCCTCACCAACACATAATCCCTGAAGATCTCATCTTTGGGCCTCAAGTGTCAGTGGAAGCTCATGATGATAGTAACAACAACAATAATAATGGTGTCAACAATTTGGGAACTCGTGGAAGAAGGAAGCTGCTTCAGAATTTGGATCATGGCGTTTCGGATCAAGATCATCAAATCAAGTTGATGCATCGAGAAAGGGAGAGGCAAAGAAGACAAGAAATGGGTGCTCTTTATATGTCTCTAAGAACCCTACTTCCTCTTGAATTTATCAAGGGGAAAAGGGCGATATCGGATCAAATGAATGGGGCGGTGAATTATATAAAGTATCAGAAGAAGAAAATCAAAGAGTTTGAAGCTAAAAGAGATGAATTGAAGAAGCTGTATAATAGTTCAAATGACTTAGAAATATCAAGAGGACAGACTCCAATTTGCAGCTTCAAAGTTAGCTCCTTTGATGGAGGACTTGAAATCTTGATCATAACAAATGATTTCCATGGATTTCCCCTTTCAAGAATCTTGAAAGTAATTGTTGATCAAGGGTTGGATGTCGTCCGCTGTGGTTCGACCACGATGAACGACAAATCAATGCACACCATTCAAATGGAGGTAAGATTATTGCTTCGAGAGTCT

Protein sequence

MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNNNGVNNLGTRGRRKLLQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDFHGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEVRLLLRES

Homology

[Close]

BLAST of Cp4.1LG09g01220 vs. ExPASy Swiss-Prot
Match: Q9STJ6 (Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.1e-27
Identity = 71/163 (43.56%), Postives = 104/163 (63.80%), Query Frame = 0


Query: 66  HGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKY 125
           H   D   + KL+HR+ ERQRRQEM  L+ +LRT LPL++IKGKRA+SD +NGAVN+IK 
Sbjct: 34  HETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHLPLKYIKGKRAVSDHVNGAVNFIKD 93

Query: 126 QKKKIKEFEAKRDELKKL----YNSSND---LEISRGQTPICSFKVSSFDGGLEILIITN 185
            + +IKE  A+RDEL +     Y S+ D        G++   +  V     GLE+++ +N
Sbjct: 94  TEARIKELSARRDELSRETGQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLEVVVSSN 153

Query: 186 DF--HGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 220
                  PLS++L+ I ++GL+V+   +T +ND+ MHTIQ+EV
Sbjct: 154 SSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLMHTIQVEV 196

[Close]

BLAST of Cp4.1LG09g01220 vs. ExPASy Swiss-Prot
Match: Q9FLI0 (Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 8.4e-24
Identity = 64/151 (42.38%), Postives = 97/151 (64.24%), Query Frame = 0


Query: 76  KLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKKIKEFEA 135
           KL+HR  ERQRRQEM  L+ SLR+ LPL++IKGKRA+SD +NGAV++IK  + +IK+  A
Sbjct: 28  KLLHRNIERQRRQEMAILFASLRSQLPLKYIKGKRAMSDHVNGAVSFIKDTQTRIKDLSA 87

Query: 136 KRDELKKLYNSSNDLEIS-----RGQTPICSFKVSSFDGGLEILI--ITNDFHGFPLSRI 195
           +RDELK+       L  S       ++   S  V     G E+++  + +    +PLSR+
Sbjct: 88  RRDELKREIGDPTSLTGSGSGSGSSRSEPASVMVQPCVSGFEVVVSSLASGLEAWPLSRV 147

Query: 196 LKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 220
           L+V+  QGL+V+   +  +N++ M+TIQ+EV
Sbjct: 148 LEVLHGQGLEVISSLTARVNERLMYTIQVEV 178

[Close]

BLAST of Cp4.1LG09g01220 vs. ExPASy Swiss-Prot
Match: Q9FLI1 (Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-23
Identity = 71/155 (45.81%), Postives = 100/155 (64.52%), Query Frame = 0


Query: 76  KLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKKIKEFEA 135
           K+MHRE ERQRRQEM +LY SLR+LLPL FIKGKR+ SDQ+N AVNYIKY ++KIKE   
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELSV 62

Query: 136 KRDELK-----KLYNSSN-----DLEISRGQTPICSFKVSSFDGGLEILIITNDFHGFP- 195
           +RD+L       L  SSN     D+E+  G+  +    V     G+EI++ +    G P 
Sbjct: 63  RRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVV---VRQCLVGVEIMLSSRCCGGQPR 122

Query: 196 LSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 220
            S +L+V+ + GL ++   S+ ++D+ ++TIQ EV
Sbjct: 123 FSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEV 154

[Close]

BLAST of Cp4.1LG09g01220 vs. ExPASy Swiss-Prot
Match: Q9STJ7 (Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.0e-21
Identity = 63/148 (42.57%), Postives = 96/148 (64.86%), Query Frame = 0


Query: 76  KLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKKIKEFEA 135
           KL+H+E E++RRQEM +LY SLR+LLPLEFI+GKR+ SDQ+ GAVNYI Y ++ IK+  +
Sbjct: 3   KLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDINS 62

Query: 136 KRDELKKL----YNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDFHGFPLSRILKV 195
           KRD+L  L    + SSN+ E +     +    +     G+EI++        P S +L+V
Sbjct: 63  KRDDLVLLSGRSFRSSNEQEWNEISNHVV---IRPCLVGIEIVL---SILQTPFSSVLQV 122

Query: 196 IVDQGLDVVRCGSTTMNDKSMHTIQMEV 220
           + + GL V+    +++ND+ +HT+Q EV
Sbjct: 123 LREHGLYVLGYICSSVNDRLIHTLQAEV 144

[Close]

BLAST of Cp4.1LG09g01220 vs. ExPASy Swiss-Prot
Match: Q9LN95 (Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-15
Identity = 61/166 (36.75%), Postives = 90/166 (54.22%), Query Frame = 0


Query: 70  DQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKK 129
           D+    +  H+E ERQRRQE  +L+  LR LLP ++IKGKR+ +D +  AVNYIK  +KK
Sbjct: 70  DEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKK 129

Query: 130 IKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDG---------------GLEIL 189
           IKE   KRD +K+     +    SRG+  I S   S+                  GLEI+
Sbjct: 130 IKEVSEKRDRIKRSITHPS----SRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIV 189

Query: 190 IITNDFHGFPLSRILKVIV-DQGLDVVRCGSTTMNDKSMHTIQMEV 220
           +   + H   LS +L+++  +Q  ++V C ST ++   +HTI  EV
Sbjct: 190 VSCCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEV 231

[Close]

BLAST of Cp4.1LG09g01220 vs. NCBI nr
Match: XP_023541045.1 (transcription factor bHLH118 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 438 bits (1127), Expect = 1.57e-154
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNNNGVNNLGTRGRRKL 60
           MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNNNGVNNLGTRGRRKL
Sbjct: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNNNGVNNLGTRGRRKL 60

Query: 61  LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV 120
           LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV
Sbjct: 61  LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV 120

Query: 121 NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF 180
           NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF
Sbjct: 121 NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF 180

Query: 181 HGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 219
           HGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV
Sbjct: 181 HGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 219

[Close]

BLAST of Cp4.1LG09g01220 vs. NCBI nr
Match: KAG7013193.1 (Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 439 bits (1128), Expect = 2.20e-154
Identity = 223/226 (98.67%), Postives = 223/226 (98.67%), Query Frame = 0


Query: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNNNGVNNLGTRGRRKL 60
           MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNN GVNNLGTRGRRKL
Sbjct: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNN-GVNNLGTRGRRKL 60

Query: 61  LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV 120
           LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV
Sbjct: 61  LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV 120

Query: 121 NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF 180
           NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF
Sbjct: 121 NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF 180

Query: 181 HGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEVRLLLRES 226
           HGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEVRLLL  S
Sbjct: 181 HGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEVRLLLVHS 225

[Close]

BLAST of Cp4.1LG09g01220 vs. NCBI nr
Match: KAG6574137.1 (Transcription factor basic helix-loop-helix 126, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 429 bits (1104), Expect = 4.86e-151
Identity = 217/219 (99.09%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNNNGVNNLGTRGRRKL 60
           MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNN GVNNLGTRGRRKL
Sbjct: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNN-GVNNLGTRGRRKL 60

Query: 61  LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV 120
           LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV
Sbjct: 61  LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV 120

Query: 121 NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF 180
           NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF
Sbjct: 121 NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF 180

Query: 181 HGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 219
           HGFPLSRILKVIVDQGLDVVRCGST MNDKSMHTIQMEV
Sbjct: 181 HGFPLSRILKVIVDQGLDVVRCGSTMMNDKSMHTIQMEV 218

[Close]

BLAST of Cp4.1LG09g01220 vs. NCBI nr
Match: XP_022945714.1 (transcription factor bHLH118 [Cucurbita moschata])

HSP 1 Score: 428 bits (1101), Expect = 1.39e-150
Identity = 216/219 (98.63%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNNNGVNNLGTRGRRKL 60
           MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNN GVNNLGTRGRRKL
Sbjct: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNN-GVNNLGTRGRRKL 60

Query: 61  LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV 120
           LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV
Sbjct: 61  LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV 120

Query: 121 NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF 180
           NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF
Sbjct: 121 NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF 180

Query: 181 HGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 219
           HGFPLSRILKVIVDQGLDVVRCGSTTMN+KS+HTIQMEV
Sbjct: 181 HGFPLSRILKVIVDQGLDVVRCGSTTMNNKSIHTIQMEV 218

[Close]

BLAST of Cp4.1LG09g01220 vs. NCBI nr
Match: XP_022967981.1 (transcription factor bHLH118-like [Cucurbita maxima])

HSP 1 Score: 426 bits (1094), Expect = 1.63e-149
Identity = 214/219 (97.72%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNNNGVNNLGTRGRRKL 60
           MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNN GVNNLGTRGRRKL
Sbjct: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNN-GVNNLGTRGRRKL 60

Query: 61  LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV 120
           LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV
Sbjct: 61  LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV 120

Query: 121 NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF 180
           NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILI TNDF
Sbjct: 121 NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILITTNDF 180

Query: 181 HGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 219
           HGFPLSRILKVIVDQGL+V+ CGSTTMNDKSMHTIQMEV
Sbjct: 181 HGFPLSRILKVIVDQGLEVISCGSTTMNDKSMHTIQMEV 218

[Close]

BLAST of Cp4.1LG09g01220 vs. ExPASy TrEMBL
Match: A0A6J1G1R2 (transcription factor bHLH118 OS=Cucurbita moschata OX=3662 GN=LOC111449857 PE=4 SV=1)

HSP 1 Score: 428 bits (1101), Expect = 6.75e-151
Identity = 216/219 (98.63%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNNNGVNNLGTRGRRKL 60
           MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNN GVNNLGTRGRRKL
Sbjct: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNN-GVNNLGTRGRRKL 60

Query: 61  LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV 120
           LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV
Sbjct: 61  LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV 120

Query: 121 NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF 180
           NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF
Sbjct: 121 NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF 180

Query: 181 HGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 219
           HGFPLSRILKVIVDQGLDVVRCGSTTMN+KS+HTIQMEV
Sbjct: 181 HGFPLSRILKVIVDQGLDVVRCGSTTMNNKSIHTIQMEV 218

[Close]

BLAST of Cp4.1LG09g01220 vs. ExPASy TrEMBL
Match: A0A6J1HTL2 (transcription factor bHLH118-like OS=Cucurbita maxima OX=3661 GN=LOC111467355 PE=4 SV=1)

HSP 1 Score: 426 bits (1094), Expect = 7.87e-150
Identity = 214/219 (97.72%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNNNGVNNLGTRGRRKL 60
           MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNN GVNNLGTRGRRKL
Sbjct: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNN-GVNNLGTRGRRKL 60

Query: 61  LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV 120
           LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV
Sbjct: 61  LQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAV 120

Query: 121 NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDF 180
           NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILI TNDF
Sbjct: 121 NYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGLEILITTNDF 180

Query: 181 HGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 219
           HGFPLSRILKVIVDQGL+V+ CGSTTMNDKSMHTIQMEV
Sbjct: 181 HGFPLSRILKVIVDQGLEVISCGSTTMNDKSMHTIQMEV 218

[Close]

BLAST of Cp4.1LG09g01220 vs. ExPASy TrEMBL
Match: A0A6J1CJV9 (transcription factor bHLH118-like OS=Momordica charantia OX=3673 GN=LOC111011677 PE=4 SV=1)

HSP 1 Score: 310 bits (793), Expect = 9.02e-104
Identity = 169/233 (72.53%), Postives = 189/233 (81.12%), Query Frame = 0


Query: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEAHDDSNNNNNNGVNNLGT---RGR 60
           M+PLQK E+KCFQISFNPHQHIIPEDLIFG  VS +     NNNNN GVNN      R R
Sbjct: 1   MYPLQKAEEKCFQISFNPHQHIIPEDLIFGRHVSEDQ--QHNNNNNYGVNNNNLPNIRRR 60

Query: 61  RKL-------LQNL--DHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKG 120
           RKL       L NL    GVSD DH  K+MHRERERQRRQEMG+LYMSLRTLLPLEFIKG
Sbjct: 61  RKLHHQLTTHLDNLHASGGVSDLDHNAKIMHRERERQRRQEMGSLYMSLRTLLPLEFIKG 120

Query: 121 KRAISDQMNGAVNYIKYQKKKIKEFEAKRDELKKLY-NSSNDLEISRGQTPICSFKVSSF 180
           KRAISDQMNGAVNYIK+QKKKIKE EAKRDELKKL  N+ N  E SRGQTPICSFK+SSF
Sbjct: 121 KRAISDQMNGAVNYIKHQKKKIKEIEAKRDELKKLDDNNWNRFEKSRGQTPICSFKISSF 180

Query: 181 DGGLEILIITNDFHGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEVR 220
            GGLEI+I T+ F+GFPLSRILKV+V+QGLDV+ C S+++N+KS+HT+QMEVR
Sbjct: 181 GGGLEIVITTSGFNGFPLSRILKVVVEQGLDVISCSSSSVNEKSIHTVQMEVR 231

[Close]

BLAST of Cp4.1LG09g01220 vs. ExPASy TrEMBL
Match: A0A5A7SRP9 (Transcription factor bHLH118-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00080 PE=4 SV=1)

HSP 1 Score: 301 bits (770), Expect = 2.16e-100
Identity = 160/227 (70.48%), Postives = 186/227 (81.94%), Query Frame = 0


Query: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVEA------HDDSNNNNNNGVNNLGT 60
           M+PL+K E+KCFQISFNPHQHIIPEDLIFG   S         +D+++NN NNGV NL  
Sbjct: 1   MYPLRKSEEKCFQISFNPHQHIIPEDLIFGHHGSAAVGAADNNNDNNSNNKNNGVKNLSM 60

Query: 61  RGRRK-LLQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAIS 120
             RRK L++ L+    DQDH+IKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAIS
Sbjct: 61  ARRRKPLVETLED--DDQDHKIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAIS 120

Query: 121 DQMNGAVNYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGL-E 180
           DQMNGAVNYIK+Q++KIKE EAKRDELKK+YNS+N       +TP CSFK+S FDGG+ E
Sbjct: 121 DQMNGAVNYIKHQEQKIKEIEAKRDELKKMYNSNNFERSKLEETPNCSFKISCFDGGVVE 180

Query: 181 ILIITNDFHGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 219
           ILI T  FHGFPLSRILKV+V+QGL+V+RCGST +N KS+HTIQ+EV
Sbjct: 181 ILITTIGFHGFPLSRILKVVVEQGLEVIRCGSTIINHKSIHTIQIEV 225

[Close]

BLAST of Cp4.1LG09g01220 vs. ExPASy TrEMBL
Match: A0A0A0LB70 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G178570 PE=4 SV=1)

HSP 1 Score: 298 bits (763), Expect = 2.50e-99
Identity = 162/227 (71.37%), Postives = 187/227 (82.38%), Query Frame = 0


Query: 1   MFPLQKCEDKCFQISFNPHQHIIPEDLIFGPQVSVE---AHDDSNNNNNN---GVNNLGT 60
           M+PL+K E+KCFQISFNPHQHIIPEDLIF   VS     AH+D++NN+NN   GV NL T
Sbjct: 1   MYPLRKSEEKCFQISFNPHQHIIPEDLIFEHHVSAAVGAAHNDNHNNSNNKNNGVKNLST 60

Query: 61  RGRRK-LLQNLDHGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAIS 120
             RRK L++ L+    DQDH+IKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAIS
Sbjct: 61  PRRRKPLVETLED--DDQDHKIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAIS 120

Query: 121 DQMNGAVNYIKYQKKKIKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDGGL-E 180
           DQMNGAVNYIK+Q+KKIKE EAKRDELKK+ NSSN       + P CSFK+S FDGG+ E
Sbjct: 121 DQMNGAVNYIKHQEKKIKEIEAKRDELKKMNNSSNFERSKLEEIPNCSFKISCFDGGVVE 180

Query: 181 ILIITNDFHGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 219
           ILI T  FHGFPLSRILKV+V+QGL+V+RCGS+ +N KS+HTIQ+EV
Sbjct: 181 ILITTIGFHGFPLSRILKVVVEQGLEVIRCGSSIINHKSIHTIQIEV 225

[Close]

BLAST of Cp4.1LG09g01220 vs. TAIR 10
Match: AT4G25410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 5.8e-28
Identity = 71/163 (43.56%), Postives = 104/163 (63.80%), Query Frame = 0


Query: 66  HGVSDQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKY 125
           H   D   + KL+HR+ ERQRRQEM  L+ +LRT LPL++IKGKRA+SD +NGAVN+IK 
Sbjct: 34  HETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHLPLKYIKGKRAVSDHVNGAVNFIKD 93

Query: 126 QKKKIKEFEAKRDELKKL----YNSSND---LEISRGQTPICSFKVSSFDGGLEILIITN 185
            + +IKE  A+RDEL +     Y S+ D        G++   +  V     GLE+++ +N
Sbjct: 94  TEARIKELSARRDELSRETGQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLEVVVSSN 153

Query: 186 DF--HGFPLSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 220
                  PLS++L+ I ++GL+V+   +T +ND+ MHTIQ+EV
Sbjct: 154 SSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLMHTIQVEV 196

[Close]

BLAST of Cp4.1LG09g01220 vs. TAIR 10
Match: AT5G51790.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 6.0e-25
Identity = 64/151 (42.38%), Postives = 97/151 (64.24%), Query Frame = 0


Query: 76  KLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKKIKEFEA 135
           KL+HR  ERQRRQEM  L+ SLR+ LPL++IKGKRA+SD +NGAV++IK  + +IK+  A
Sbjct: 28  KLLHRNIERQRRQEMAILFASLRSQLPLKYIKGKRAMSDHVNGAVSFIKDTQTRIKDLSA 87

Query: 136 KRDELKKLYNSSNDLEIS-----RGQTPICSFKVSSFDGGLEILI--ITNDFHGFPLSRI 195
           +RDELK+       L  S       ++   S  V     G E+++  + +    +PLSR+
Sbjct: 88  RRDELKREIGDPTSLTGSGSGSGSSRSEPASVMVQPCVSGFEVVVSSLASGLEAWPLSRV 147

Query: 196 LKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 220
           L+V+  QGL+V+   +  +N++ M+TIQ+EV
Sbjct: 148 LEVLHGQGLEVISSLTARVNERLMYTIQVEV 178

[Close]

BLAST of Cp4.1LG09g01220 vs. TAIR 10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 7.8e-25
Identity = 71/155 (45.81%), Postives = 100/155 (64.52%), Query Frame = 0


Query: 76  KLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKKIKEFEA 135
           K+MHRE ERQRRQEM +LY SLR+LLPL FIKGKR+ SDQ+N AVNYIKY ++KIKE   
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELSV 62

Query: 136 KRDELK-----KLYNSSN-----DLEISRGQTPICSFKVSSFDGGLEILIITNDFHGFP- 195
           +RD+L       L  SSN     D+E+  G+  +    V     G+EI++ +    G P 
Sbjct: 63  RRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVV---VRQCLVGVEIMLSSRCCGGQPR 122

Query: 196 LSRILKVIVDQGLDVVRCGSTTMNDKSMHTIQMEV 220
            S +L+V+ + GL ++   S+ ++D+ ++TIQ EV
Sbjct: 123 FSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEV 154

[Close]

BLAST of Cp4.1LG09g01220 vs. TAIR 10
Match: AT4G25400.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-22
Identity = 63/148 (42.57%), Postives = 96/148 (64.86%), Query Frame = 0


Query: 76  KLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKKIKEFEA 135
           KL+H+E E++RRQEM +LY SLR+LLPLEFI+GKR+ SDQ+ GAVNYI Y ++ IK+  +
Sbjct: 3   KLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDINS 62

Query: 136 KRDELKKL----YNSSNDLEISRGQTPICSFKVSSFDGGLEILIITNDFHGFPLSRILKV 195
           KRD+L  L    + SSN+ E +     +    +     G+EI++        P S +L+V
Sbjct: 63  KRDDLVLLSGRSFRSSNEQEWNEISNHVV---IRPCLVGIEIVL---SILQTPFSSVLQV 122

Query: 196 IVDQGLDVVRCGSTTMNDKSMHTIQMEV 220
           + + GL V+    +++ND+ +HT+Q EV
Sbjct: 123 LREHGLYVLGYICSSVNDRLIHTLQAEV 144

[Close]

BLAST of Cp4.1LG09g01220 vs. TAIR 10
Match: AT1G12540.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.7e-16
Identity = 61/166 (36.75%), Postives = 90/166 (54.22%), Query Frame = 0


Query: 70  DQDHQIKLMHRERERQRRQEMGALYMSLRTLLPLEFIKGKRAISDQMNGAVNYIKYQKKK 129
           D+    +  H+E ERQRRQE  +L+  LR LLP ++IKGKR+ +D +  AVNYIK  +KK
Sbjct: 70  DEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKK 129

Query: 130 IKEFEAKRDELKKLYNSSNDLEISRGQTPICSFKVSSFDG---------------GLEIL 189
           IKE   KRD +K+     +    SRG+  I S   S+                  GLEI+
Sbjct: 130 IKEVSEKRDRIKRSITHPS----SRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIV 189

Query: 190 IITNDFHGFPLSRILKVIV-DQGLDVVRCGSTTMNDKSMHTIQMEV 220
           +   + H   LS +L+++  +Q  ++V C ST ++   +HTI  EV
Sbjct: 190 VSCCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEV 231

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g01220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STJ6	8.1e-27	43.56	Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=...	[more]
Q9FLI0	8.4e-24	42.38	Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=...	[more]
Q9FLI1	1.1e-23	45.81	Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1	[more]
Q9STJ7	3.0e-21	42.57	Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=...	[more]
Q9LN95	2.4e-15	36.75	Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1	[more]

BLAST of Cp4.1LG09g01220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541045.1	1.57e-154	100.00	transcription factor bHLH118 [Cucurbita pepo subsp. pepo]	[more]
KAG7013193.1	2.20e-154	98.67	Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6574137.1	4.86e-151	99.09	Transcription factor basic helix-loop-helix 126, partial [Cucurbita argyrosperma...	[more]
XP_022945714.1	1.39e-150	98.63	transcription factor bHLH118 [Cucurbita moschata]	[more]
XP_022967981.1	1.63e-149	97.72	transcription factor bHLH118-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG09g01220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G1R2	6.75e-151	98.63	transcription factor bHLH118 OS=Cucurbita moschata OX=3662 GN=LOC111449857 PE=4 ...	[more]
A0A6J1HTL2	7.87e-150	97.72	transcription factor bHLH118-like OS=Cucurbita maxima OX=3661 GN=LOC111467355 PE...	[more]
A0A6J1CJV9	9.02e-104	72.53	transcription factor bHLH118-like OS=Momordica charantia OX=3673 GN=LOC111011677...	[more]
A0A5A7SRP9	2.16e-100	70.48	Transcription factor bHLH118-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0LB70	2.50e-99	71.37	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G178570 PE=4 S...	[more]

BLAST of Cp4.1LG09g01220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25410.1	5.8e-28	43.56	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51790.1	6.0e-25	42.38	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51780.1	7.8e-25	45.81	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G25400.1	2.1e-22	42.57	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G12540.1	1.7e-16	36.75	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 123..150
None	No IPR available	PANTHER	PTHR13935:SF106	TRANSCRIPTION FACTOR BHLH120-RELATED	coord: 17..220
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 80..132 e-value: 0.0042 score: 26.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 77..125 e-value: 7.5E-7 score: 29.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 74..126 score: 12.163168
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 66..152 e-value: 4.4E-9 score: 38.2
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 72..141
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 17..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g01220.1	Cp4.1LG09g01220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0090575	RNA polymerase II transcription regulator complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity