Cp4.1LG09g00940 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG09g00940
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionDNA-directed RNA polymerase III subunit RPC3
LocationCp4.1LG09: 513901 .. 520915 (-)
RNA-Seq ExpressionCp4.1LG09g00940
SyntenyCp4.1LG09g00940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAGCTACATCGACTATCCCTTGCCCCATCGCCGTCCGCCTTCCCGCACTCGCTTACCCAACCAGTTGTTCTCCCGCCATGCCCTTCAACCTTGTACAGATCAATTTTCGCTCACCTTTTTCCCACCGGAGCACGAGTTTTTAAGCCGTACGCCTCACTATTGCTCTCTTATCGTCTCTCTACTCGGTTGAAGCGAAGATTTTCGTTGTTTCAAGCATCTACACTCTAGTTTCTGCTGAATCAGTGCTTTATGAGCTTACAGTTCGTCAATGTCAATTCCAATTACTTCAAAATACTTGATATCATAGACGCACGGCAATCTTAAAGGAGGAAATCATGGCGTCGACTCAGTATGGCATCAAATATGCCGTCCACATTATCACTGCGCACTTCGGCAATCTCGTCGCGGTATGCCTTTTCTTTTCTAAAACTTGCTTCAAATCTTGATTCGTATTATGTTATCAGCCTGTTCTTCTTCGTATCATCGTTTTTCATTAATATTGACTGTGCATTGACAGAAAGTGTGCGAAACCCTGCTTCGAAGGGGGCCTCTGACCTTGAGACTTCTTGTACGATTCACGGAACTTAGCTCATCACAGATTAACAACTCCCTTCTTATTCTCATCCAACATAATTGCGTCCAAGCCTTCACTGCAGTGACAGAAGGTATAATGAGTTTTCATTCATGGAGAAACTTCTGAGTCTATGGTATTTTTTTGGTAAATTGTTTGGTTAATTAGTGACAATAAGCTCACTGGCTAAAAGAATAACCATTTTACCTTAAATAGAATCTGGATTTTAGAACTGAGTTCGATTAAGTTCATATAACCGGGATTATATAGCGTCATTTAAAATAATTTATCTATGCTCAGTTTAAGCCCGTACGTTTTCTTAATGTATCAACTTTGATAGGTAGTTATTTTATGGAACCATATTGACACTATTAGGTAATTAGTGTGTTAAGAAGGTAGTTGTATTCTCGAAAAGGACACCATGTGTTTGCAGATTGAGCTTCTTATCATCGTTATTGTAAATGCACATGTAGGAGAGTTCGGAGACGCACCCAAGGCAGACACACAATACTTGGCGTTGTTTAGTAACATACTTCATCGTATGAGATTTTCCAAATTCCTGGCAATTGCTTCAGAAAAGCTTGAGAAAGATAAAGATGTTAGTTCATATACTCACATTGGTAAAACTCTTGTTGAGAATTTTCAACTTCGAGGGAATTTAGATTCTTAACTTATGTTTCTGATTTCGTAGTGTGAAGAACTTCTTGAGGGTCTGTTGCAGAATGGTAGGCTTTCAATGGAACAAATAATTGAAAGAGCAAAGTCCAGTAAACATGCAGGCAAGTTTTTTACCTGGTATTTTTTATTTGCATTTTGCTATTTACTTCTATCTGCAGTATTTTTTAATATGCTACGTTCTCCTAGTGCCATAAAATCGTGTATTGATTTAAATTTTTAAAAGGAACGTTATTGATCAGAAAAGGGAGATTTTAAGATTGATGGATCCCAGAGATCATTTCTATATCATTCATGTCAATCTTAATATTAGATTTTATTATCACCTCTTGACTTGATTGGGGTTTCAGTTATCAATTAAATTTTTATTTGTTTCAAGAAAAAAAATTGTTTTTCTTTCAACCTCATCTTGTTTGGAAGAGTGAAATTGGTGCTTAATCCTAAAACTGTGATATGTTTTTGTTGAACTTACTGATCAAGTACATCAATGAAGAAATAACATAATTTAGAAGGCGGCTCTTGCACTGAGAATGTGTTTGACTTGTATTTGAATATGCCACTTATATAAAACGTTTGGTTTCTGAGGTATTGTTTCTGTATTTTCAGGAAACCGTCCAAGTCCAGATGTTGTAAATGAAAGTTTATTAAAACTTTTGAATGCCCATTTTGTTGAACGCTGTCCAGCCCCTGAACCAACTCTTTCACCCCAAGTTGAAGAGCAGCCTCCTCCTAGAAAAAGAGGTGCTAAGGCTGCCAAGGTAGCTGAATTTATGTGAAACTTGTCATGCATATTGGTGCTAAATATCATCTTTGAGTCATTAAATGGATCCATGACAGGTATCTGAGGTGCCACCGACCTTAGAACAACGTCTTGTAGAATCAGCACGTCCGATGGAAGTTATAAGATTTTCAATAGGTGAAACCAACACTGAAGCTGAAGAGAGTGAACATTATTCATCAATTTCTGGACAGAAGGTATGTATGAGATTATCGTATCAAATTACCTAGCTGAAACATGTTTGGTACTTGCTCACAATTTTTCTGTAGCGCAAGCGTGGTGATCTGGATATGATACAAGAGTCTGGAGATGCAGATGGTATTATTCTTTGGCGTGCAAACTTTGATGAGTTTATAAGATGTCTTAGACATAAGGTTGGTATTATTTTTTCCTTCAGAATTTCTTATATATTCTAACTAGATCATATGAAATTACAGTGAATTTGATGCTCCTTTCTTGTATTCACATTATTGATGAGAAAGAAAATAAGGCATGACAAATGCCCACCCCTTGGCCCAGTTTCGGTTGTACAAGCGGGCAGAGCATTATTTTCAAAAAAAGAAGGCATGACAAATATGAACAATTTAATTTAACTCCCTTGAAACCTATTGATAGAGTACTTCTATGTAATGGGAAAAAAAAGCACAACCTAGATGAGGGACCCGAGCCTATGGAGCACAAATCAAACGAAAGGCCCCGAATATAAAATAATGAGGAGAGAAGGCATGTTACTGAAGGATTTGCGTAGAGCACTCCAAATATTGGAGGTTGTATACTGTATGTTTTATCAAGTTGGTAGCTGACACATGCTAACTTTTTACAAAAATGAGGGGAAAACTGTACTTAAATTCACAAGTTGTTAAACTCAAAATATCTCTGTCTGTTGAATATTTGATAAATCATTAACTTGATTTTAAATTAACTGTTCATCCCATGCTAACTCCCCCCGATATCTTATGGTCAATTCAAATGGTAATTGCATCAATATCTTACTATGGCTCTAGGCTTGCATTGAACATGTCAGATCACAGTTTGATGACGGAGCGGTAAACGTCTTGAGTGCCATTTTGGAGGCTACTCGAAGTTCTGAAAAAATCGTGAAAACAGAGATAACAGGTACAATCTATAATGTTTGTGTAGATTTCTGAAGGAGTTTAGTTATGCACGTATTTGATCTTGATGCACATTGATCGTATAAAAATATATGTTGTGAGTTGGTACTAGAAGGAATTGTTTGGGCGCTCTTTTGGAGGACAATTCTCTATTTTTAAAAATAAAAATATTAGTGAAAGCATGTTGGCTTATTTACTTTTTACAGGCTGTTTTCTCATGTTTTCTTTTAGTTTGTTTTTAAAGATGATTTGATTCTTAAAACAATTGAAATTATTTTTTCTAGAACTGTTGTCTCGTAAATAATGATCAAGTGCAGAACAAGGCTAATCTTTCTGAGCCTTCTCCTTCAAATTTTAAAGTTAAAAGCAGAAAACTGTTTTTCAAGATGCCTTTCAGGATTCATATTTGATTTTATCATGTAATGAATTCATTTACTTCAATGCAGACAATAATGACCTTTGCAAAGCCTGCCAGTACAGTAAGGCAAAAAAATGAGAATTTTTGGGGCACTTTATCAGTATCATTAACCAGCATGCACATTATATTTTGTTCTCTCTTTTTACGTTCTTTCCTGTTCCACCTCTTTTACATAATATGTTTCTTAAACTGAGTAATAGTTTCTTGGCTTTTATCTAGACTCCTTTTCTTGTTATGTTACTCTATGATGGAGGTCTAGTTGGATGCTTGGTTCATGATACATTTTGTTAAGACTAAATCATGAACGATAGGCCTTAAGAAATATAAGAAAATGATACATGATTTGGAAACTAGCGCAGAAATGTGTTTTCCTTTACCAATTACGTCCACTTTTATGTCTCCTGTCCTAAAAGTTCAATTGTTTGCAGTTCCTTTGTCACTGGATAACATATATGAGGAGGTAATGAAGAATGAAGTAGGACGTAGTATGACTTTAGATCGGGTTGAAGCTTCCCTCTCTGCATTGGGTTGTTCAGGAATGGAAGATTATAAAATTAGTATGTTCACCCTCTGTTAAACTAAGTTTTCCCGATGTGTTTAATTTTCACACTTCCCATGTGATTTACTTTAAGTTTCTTCTAAAAACCTTTGCTTGCCCAGATTTACAGAAGATCATCGAACAAGCTCAAATTGATGAGGTTTCTCTCTCCCTCTCATTTATTTAGTGAAAAATACACCTTTGTTCTCTGAAATTTGAGAAATTACATGTCTTCGTTCCTAAATTTTAAAAATGACATCTTATTGCTTGCGCAACCAGTTGATTGAAATCTCTTATCTGAGATAGTTTGTTAGCAAGCATGATTCATCTCTTATCCCTTGCACTTACAGACATGGAATAATTTATAATGAACTAACTTCAATTTTCTTGATTGCAGGTTGAATCAATTGTTCTAAAAAGATATGGAAGAGATGCGTACAGAATGTTCAGATTCCTATCAAAAACTGGTGGCTTGGTTGAGACAGAAAAGGTAAGGAGTTATTGGTCGGTCAGTTGCTATCAAGGTTGTCTAGCTACCAAAAAAGCATGTATGCATTTGTAATATGCCTTTCATTTTATCTAGAAATGTATGTAATTTACACGTGAATGCAACTAATACATAATTGAACATCCATATAGAATATACAGTTGATTTTAAAATTCAACTTGAGCGTTAATTAAGGAGTAAAAACCTAATAATATAATGGGCTGACCTTACCAATAGTTGTCTTTTTAATCTAGTGAAGATTACATGGAATTGTTATTTTTTGTACTTAGTATTCTGGAATTGACTATTGGTAAAAAAAGAAATTGTTTATTTAATTTACAGATTTTCCATGTCTTTTTTCTGTAGATTTCCGATAGTGCATTTGTTGACAAGAATGAGGCGCCTAAAATTTTATATAGGTTGTGGAAGGATGAGTACCTATACATGGAGGTAAACATCTTTGCTCTCTATGCATGTGTTTTTGCATCCAAATTCATATATTTAGATCATGAAGCAAAGATACTGTACTTGTTTTTTTTCCCAATAAGAAGCATGACATTATTCATTGATAAAGTTGAAAAACACAAAGTAGGACCATTGGACCTAACTAGAAAAAATATTGAAGGATAGTTAATTTTTGATCAGGTATCATTATGTTTTCTTATCAGAATTGGTTGTAGTTTAATTAGCAACTTTGCACATCTTTGATATGAATTTTCTTTTTAGACTTATTATTATGCATGTACAAATCTAATTCGTTTTATTGTTTTGCCCGTACTTATCTTTTATTTTATTTTTTATATTTGTGTATCTATAAGCCTATATCATACCACATCTAATAAGAATGTGTTTTGTCTCTATTTCTTCATTACTGTGTATCATCTTGTACCTACACTGGCTAGACATCTCTTTTTCCACTTGACCGATTTACATTGTTAACCTTTTTGGGGGATTCATCCTAGTAACACAATCTCTCTTTTGTTGCAGAAAGTAGCTATAACAATACCTAGACATTCCCTGTGCTTGTTGTGGAGAGTAGACAGATATAATTTGTGGGAACATGTTCTGGATGAGATGTATCATGCTTCATTGAACTTGCAGCTACGACAGGCTTATGAGATGGAACAAGACAAAGAGGTTAGTGTGCACAACATTCTAATAAATTCATATATGCAATTGTAATGGTATTAGGTTCTATTAGATTTCTCTAACAGAGATATGGTCCTAGTGTGCTTCTGATCACTGATAACTTTATCTTCAGTCATCTTATTCACGTGTTTCCTTCCTACTAGAGAAATCGAGTCTTACCTTTTGATGTGGTTTATCAGGGCAGAACCTAAAATTGCATTTATCCTACCGGTTTTAGTTCTCTAAGAGGCCAAATGCAGCTTGCTTCCTAATTTTATTAATAATGTCCATTTTAAAAATCACCTTTTGGTCCCATGTCCCTGAATTTTAACAATTTAGTTTTTGAACTTTGATTTGTAACAATATAGTACATTCAATTTTGCAACAATTTTATCTTTGTATTTTCAAGTTCTAACCATTTAATCTCTATTGAAAATTTAATAGAATTTTTTACATGGGTAGATCAATAAACTAATTAGGGACCCAATAGCTTTATAAAGTATAAAGTCTAAACCCTAAATTCAAATTTAGGGCCAAACCATTAGTTCCTCTTTCTCTCTTGATGAAGCTCTAGCATCGAATAATACAATGGCTAAAGCTTGATTGATATGGGGCCGATGGCTAATTCCTCTTCCATAAACAGCAAACGTCAGAATTCACCATCAGTTATTCCTATGTCTACAGAGGCTTGAAGTCCTCAAAATGTTTGAAGTGCAAAAACGATTTAATTAAGTCTATCCATCCAAAAAACTAAGCTTTTAATGAAGTTGTTCTAAAGGACCATTCCTTCCATGTCTGTGTGTGTATGTGGGAATGTTAAAAAACTGACTCCTTGCTGTGGCAACCAACTCTTTTGCAGCTTCTGAATCTTCCACCAGACAAGCGTGGTGGTCCGCTCGAGAAAAGATATAATCGTTTGAGGAATGTCAGGATACTCCTGGAGTCGTCGTTGCTGAAGCTCGACGATGCTTTAATGCTTTTCCATGACTTCTAATATGAAGGATTTATAGATCAGTAGCTCCTTGAAGAGTGAATGTGGAGGAAGCCTTGCCCATCTTTTAGACTTGCAGAATAAAATTATGATTAGCAGTGTTTTCTTCTTCCCATTAGGATACAGGAATTTCATCTTCCTTATAAATATTGTTTGATTAAGGTTAATTATGGAATATGTCAAATGGCCTTCCTGAGTATACTTTTATTATTACTATTATTATTATTAATAATAGGAAGTTTTTAATGTATCACATCATTGACAGATTTTTCTGTGACAATAGAGCCTTGGTTTTATTTAAGTCTAAATAGTATG

mRNA sequence

AATAGCTACATCGACTATCCCTTGCCCCATCGCCGTCCGCCTTCCCGCACTCGCTTACCCAACCAGTTGTTCTCCCGCCATGCCCTTCAACCTTGTACAGATCAATTTTCGCTCACCTTTTTCCCACCGGAGCACGAGTTTTTAAGCCGTACGCCTCACTATTGCTCTCTTATCGTCTCTCTACTCGGTTGAAGCGAAGATTTTCGTTGTTTCAAGCATCTACACTCTAGTTTCTGCTGAATCAGTGCTTTATGAGCTTACAGTTCGTCAATGTCAATTCCAATTACTTCAAAATACTTGATATCATAGACGCACGGCAATCTTAAAGGAGGAAATCATGGCGTCGACTCAGTATGGCATCAAATATGCCGTCCACATTATCACTGCGCACTTCGGCAATCTCGTCGCGAAAGTGTGCGAAACCCTGCTTCGAAGGGGGCCTCTGACCTTGAGACTTCTTGTACGATTCACGGAACTTAGCTCATCACAGATTAACAACTCCCTTCTTATTCTCATCCAACATAATTGCGTCCAAGCCTTCACTGCAGTGACAGAAGGAGAGTTCGGAGACGCACCCAAGGCAGACACACAATACTTGGCGTTGTTTAGTAACATACTTCATCGTATGAGATTTTCCAAATTCCTGGCAATTGCTTCAGAAAAGCTTGAGAAAGATAAAGATTGTGAAGAACTTCTTGAGGGTCTGTTGCAGAATGGTAGGCTTTCAATGGAACAAATAATTGAAAGAGCAAAGTCCAGTAAACATGCAGGCAAGTTTTTTACCTGGTATTTTTTATTTGCATTTTGCTATTTACTTCTATCTGCAGTATTTTTTAATATGCTACGAAACCGTCCAAGTCCAGATGTTGTAAATGAAAGTTTATTAAAACTTTTGAATGCCCATTTTGTTGAACGCTGTCCAGCCCCTGAACCAACTCTTTCACCCCAAGTTGAAGAGCAGCCTCCTCCTAGAAAAAGAGGTGCTAAGGCTGCCAAGGTATCTGAGGTGCCACCGACCTTAGAACAACGTCTTGTAGAATCAGCACGTCCGATGGAAGTTATAAGATTTTCAATAGGTGAAACCAACACTGAAGCTGAAGAGAGTGAACATTATTCATCAATTTCTGGACAGAAGCGCAAGCGTGGTGATCTGGATATGATACAAGAGTCTGGAGATGCAGATGGTATTATTCTTTGGCGTGCAAACTTTGATGAGTTTATAAGATGTCTTAGACATAAGGCTTGCATTGAACATGTCAGATCACAGTTTGATGACGGAGCGGTAAACGTCTTGAGTGCCATTTTGGAGGCTACTCGAAGTTCTGAAAAAATCGTGAAAACAGAGATAACAGTTCCTTTGTCACTGGATAACATATATGAGGAGGTAATGAAGAATGAAGTAGGACGTAGTATGACTTTAGATCGGGTTGAAGCTTCCCTCTCTGCATTGGGTTGTTCAGGAATGGAAGATTATAAAATTAATTTACAGAAGATCATCGAACAAGCTCAAATTGATGAGGTTGAATCAATTGTTCTAAAAAGATATGGAAGAGATGCGTACAGAATGTTCAGATTCCTATCAAAAACTGGTGGCTTGGTTGAGACAGAAAAGATTTCCGATAGTGCATTTGTTGACAAGAATGAGGCGCCTAAAATTTTATATAGGTTGTGGAAGGATGAGTACCTATACATGGAGAAAGTAGCTATAACAATACCTAGACATTCCCTGTGCTTGTTGTGGAGAGTAGACAGATATAATTTGTGGGAACATGTTCTGGATGAGATGTATCATGCTTCATTGAACTTGCAGCTACGACAGGCTTATGAGATGGAACAAGACAAAGAGCTTCTGAATCTTCCACCAGACAAGCGTGGTGGTCCGCTCGAGAAAAGATATAATCGTTTGAGGAATGTCAGGATACTCCTGGAGTCGTCGTTGCTGAAGCTCGACGATGCTTTAATGCTTTTCCATGACTTCTAATATGAAGGATTTATAGATCAGTAGCTCCTTGAAGAGTGAATGTGGAGGAAGCCTTGCCCATCTTTTAGACTTGCAGAATAAAATTATGATTAGCAGTGTTTTCTTCTTCCCATTAGGATACAGGAATTTCATCTTCCTTATAAATATTGTTTGATTAAGGTTAATTATGGAATATGTCAAATGGCCTTCCTGAGTATACTTTTATTATTACTATTATTATTATTAATAATAGGAAGTTTTTAATGTATCACATCATTGACAGATTTTTCTGTGACAATAGAGCCTTGGTTTTATTTAAGTCTAAATAGTATG

Coding sequence (CDS)

ATGGCGTCGACTCAGTATGGCATCAAATATGCCGTCCACATTATCACTGCGCACTTCGGCAATCTCGTCGCGAAAGTGTGCGAAACCCTGCTTCGAAGGGGGCCTCTGACCTTGAGACTTCTTGTACGATTCACGGAACTTAGCTCATCACAGATTAACAACTCCCTTCTTATTCTCATCCAACATAATTGCGTCCAAGCCTTCACTGCAGTGACAGAAGGAGAGTTCGGAGACGCACCCAAGGCAGACACACAATACTTGGCGTTGTTTAGTAACATACTTCATCGTATGAGATTTTCCAAATTCCTGGCAATTGCTTCAGAAAAGCTTGAGAAAGATAAAGATTGTGAAGAACTTCTTGAGGGTCTGTTGCAGAATGGTAGGCTTTCAATGGAACAAATAATTGAAAGAGCAAAGTCCAGTAAACATGCAGGCAAGTTTTTTACCTGGTATTTTTTATTTGCATTTTGCTATTTACTTCTATCTGCAGTATTTTTTAATATGCTACGAAACCGTCCAAGTCCAGATGTTGTAAATGAAAGTTTATTAAAACTTTTGAATGCCCATTTTGTTGAACGCTGTCCAGCCCCTGAACCAACTCTTTCACCCCAAGTTGAAGAGCAGCCTCCTCCTAGAAAAAGAGGTGCTAAGGCTGCCAAGGTATCTGAGGTGCCACCGACCTTAGAACAACGTCTTGTAGAATCAGCACGTCCGATGGAAGTTATAAGATTTTCAATAGGTGAAACCAACACTGAAGCTGAAGAGAGTGAACATTATTCATCAATTTCTGGACAGAAGCGCAAGCGTGGTGATCTGGATATGATACAAGAGTCTGGAGATGCAGATGGTATTATTCTTTGGCGTGCAAACTTTGATGAGTTTATAAGATGTCTTAGACATAAGGCTTGCATTGAACATGTCAGATCACAGTTTGATGACGGAGCGGTAAACGTCTTGAGTGCCATTTTGGAGGCTACTCGAAGTTCTGAAAAAATCGTGAAAACAGAGATAACAGTTCCTTTGTCACTGGATAACATATATGAGGAGGTAATGAAGAATGAAGTAGGACGTAGTATGACTTTAGATCGGGTTGAAGCTTCCCTCTCTGCATTGGGTTGTTCAGGAATGGAAGATTATAAAATTAATTTACAGAAGATCATCGAACAAGCTCAAATTGATGAGGTTGAATCAATTGTTCTAAAAAGATATGGAAGAGATGCGTACAGAATGTTCAGATTCCTATCAAAAACTGGTGGCTTGGTTGAGACAGAAAAGATTTCCGATAGTGCATTTGTTGACAAGAATGAGGCGCCTAAAATTTTATATAGGTTGTGGAAGGATGAGTACCTATACATGGAGAAAGTAGCTATAACAATACCTAGACATTCCCTGTGCTTGTTGTGGAGAGTAGACAGATATAATTTGTGGGAACATGTTCTGGATGAGATGTATCATGCTTCATTGAACTTGCAGCTACGACAGGCTTATGAGATGGAACAAGACAAAGAGCTTCTGAATCTTCCACCAGACAAGCGTGGTGGTCCGCTCGAGAAAAGATATAATCGTTTGAGGAATGTCAGGATACTCCTGGAGTCGTCGTTGCTGAAGCTCGACGATGCTTTAATGCTTTTCCATGACTTCTAA

Protein sequence

MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQIIERAKSSKHAGKFFTWYFLFAFCYLLLSAVFFNMLRNRPSPDVVNESLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPMEVIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDALMLFHDF
Homology
[Close]
BLAST of Cp4.1LG09g00940 vs. ExPASy Swiss-Prot
Match: Q9BUI4 (DNA-directed RNA polymerase III subunit RPC3 OS=Homo sapiens OX=9606 GN=POLR3C PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 4.1e-24
Identity = 128/520 (24.62%), Postives = 224/520 (43.08%), Query Frame = 0 

Query: 4   TQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILIQHN 63
           TQ  IK    ++  HFG +V K+   L+R G   LR++   T  S  Q+  +L +L+QHN
Sbjct: 2   TQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQHN 61

Query: 64  CVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELLEGL 123
            V          +    +   +Y A  S +L  +R+ +++   ++ L  D   E ++E L
Sbjct: 62  LV---------SYQVHKRGVVEYEAQCSRVLRMLRYPRYI-YTTKTLYSDTG-ELIVEEL 121

Query: 124 LQNGRLSMEQII----ERAKSSKHAGKFFTWYFLFAFCYLLLSAVFFNMLRNRPSPDVVN 183
           L NG+L+M  ++    +R   +   GK   +                           V+
Sbjct: 122 LLNGKLTMSAVVKKVADRLTETMEDGKTMDY-------------------------AEVS 181

Query: 184 ESLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPM 243
            + ++L + HFV+RCP+  PT        PPP    A    ++E    L  +L       
Sbjct: 182 NTFVRLADTHFVQRCPS-VPTTENSDPGPPPP----APTLVINEKDMYLVPKL------- 241

Query: 244 EVIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLR 303
                 IG+        E  +     KR +   D  +   D DG I W+AN D F +  R
Sbjct: 242 ----SLIGKGKRRRSSDEDAAGEPKAKRPKYTTDNKEPIPD-DG-IYWQANLDRFHQHFR 301

Query: 304 HKACIEHVRSQFDDGAVNVLSAIL---EATRSSEKIVKTEITVPLSLDNIYE------EV 363
            +A +  V ++ D  +  ++  +L   E T SS        T PLS + I+        +
Sbjct: 302 DQAIVSAVANRMDQTSSEIVRTMLRMSEITTSS----SAPFTQPLSSNEIFRSLPVGYNI 361

Query: 364 MKNEVGRSMTL--DRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAY 423
            K  + + +TL  D     +   G SG   Y INL K +       +ES+V +R+G    
Sbjct: 362 SKQVLDQYLTLLADDPLEFVGKSGDSGGGMYVINLHKALASLATATLESVVQERFGSRCA 421

Query: 424 RMFRFLSKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHS---LC 483
           R+FR + +    +E +++ D A +   EA  +LY++  + ++ ++++  T P H+     
Sbjct: 422 RIFRLVLQKKH-IEQKQVEDFAMIPAKEAKDMLYKMLSENFMSLQEIPKT-PDHAPSRTF 461

Query: 484 LLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL 506
            L+ V+  +    +L   Y +  NL  R+ +E +++K LL
Sbjct: 482 YLYTVNILSAARMLLHRCYKSIANLIERRQFETKENKRLL 461

[Close]
BLAST of Cp4.1LG09g00940 vs. ExPASy Swiss-Prot
Match: Q2TBL4 (DNA-directed RNA polymerase III subunit RPC3 OS=Bos taurus OX=9913 GN=POLR3C PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.6e-23
Identity = 128/519 (24.66%), Postives = 223/519 (42.97%), Query Frame = 0 

Query: 4   TQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILIQHN 63
           TQ  IK    ++  HFG +V K+   L+R G   LR++   T  S  Q+  +L +LIQHN
Sbjct: 2   TQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLIQHN 61

Query: 64  CVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELLEGL 123
            V          +    +   +Y A  + +L  +R+ +++  A + L  D   E ++E L
Sbjct: 62  LV---------TYQVHKRGVVEYEAQCNRVLRMLRYPRYIYTA-KTLYSDTG-ELIVEEL 121

Query: 124 LQNGRLSMEQII----ERAKSSKHAGKFFTWYFLFAFCYLLLSAVFFNMLRNRPSPDVVN 183
           L NG+++M  ++    +R   +   GK   +                           V+
Sbjct: 122 LLNGKMTMSAVVKKVADRLTETMEDGKTMDY-------------------------AEVS 181

Query: 184 ESLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPM 243
            + ++L++ HFV+RCP    T +      PP     A    VSE    L  +L       
Sbjct: 182 NTFVRLVDTHFVQRCPLVPATENSDTGPPPP-----APTLVVSEKDMYLVPKL------- 241

Query: 244 EVIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLR 303
                 IG+        E  +     KR +   D  +   D DG I W+AN D F +  R
Sbjct: 242 ----SLIGKGKRRRSSDEDATGEPKAKRPKQTTDNKEPIPD-DG-IYWQANLDRFHQHFR 301

Query: 304 HKACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKT--EITVPLSLDNIYE------EVM 363
            +A +  V ++ D  +  ++  +L   R SE    +    T PLS + I+        + 
Sbjct: 302 DQAIVSAVANRMDQTSSEIVRTML---RMSEVTTPSGAPFTQPLSSNEIFRSLPVGYNIS 361

Query: 364 KNEVGRSMTL--DRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYR 423
           K  + + +TL  D     +   G SG   Y INL K +       +ES+V +R+G    R
Sbjct: 362 KQVLDQYLTLLADDPLEFVGKSGDSGGGMYVINLHKALGSLATATLESVVQERFGSRCAR 421

Query: 424 MFRFLSKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHS---LCL 483
           +FR + +   L E +++ D A +   EA  +LY++  + ++ ++++  T P H+      
Sbjct: 422 IFRLVLQKKHL-EQKQVEDFAMIPAKEAKDMLYKMLSENFISLQEIPKT-PDHAPSRTFY 461

Query: 484 LWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL 506
           L+ V+  +    +L   Y +  NL  R+ +E +++K LL
Sbjct: 482 LYTVNILSAARMLLHRCYKSVANLIERRQFETKENKRLL 461

[Close]
BLAST of Cp4.1LG09g00940 vs. ExPASy Swiss-Prot
Match: Q5XIL3 (DNA-directed RNA polymerase III subunit RPC3 OS=Rattus norvegicus OX=10116 GN=Polr3c PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.9e-22
Identity = 120/520 (23.08%), Postives = 220/520 (42.31%), Query Frame = 0 

Query: 4   TQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILIQHN 63
           TQ  IK    ++  HFG +V K+   L+R G   LR++   T+ S  Q+  +L +LI HN
Sbjct: 2   TQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTKASLDQVKKALCVLIHHN 61

Query: 64  CVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELLEGL 123
            V          +    +   +Y A  S +L  +R+ ++  I + K       E ++E L
Sbjct: 62  LV---------IYHVHKRGVVEYEAQCSRVLRMLRYPRY--IYTTKTLYGDTGELIVEEL 121

Query: 124 LQNGRLSMEQII----ERAKSSKHAGKFFTWYFLFAFCYLLLSAVFFNMLRNRPSPDVVN 183
           L NG+++M  ++    +R   +   GK   +                           V+
Sbjct: 122 LLNGKMTMSAVVKKVADRLTETMEDGKTMDY-------------------------AEVS 181

Query: 184 ESLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPM 243
            + ++L + HFV+RCP     L P  +   P              PP     LV + + M
Sbjct: 182 NAFVRLADTHFVQRCP-----LVPDTDSSDPG-------------PPPPAPNLVINEKDM 241

Query: 244 EVI-RFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCL 303
            ++ + S+         S+     +G+ + +       E    D  I W+ N D F +  
Sbjct: 242 YLVPKLSLIGKGKRRRSSD--EDAAGEPKAKKPRCTDNEEPTPDDGIYWQVNLDRFHQHF 301

Query: 304 RHKACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKT--EITVPLSLDNIYE------EV 363
           R +A +  V ++ D  +  ++  +L   R SE    +    T PLS + I+        +
Sbjct: 302 RDQAIVSAVANRMDQTSSEIVRTML---RMSEITTPSGAPFTQPLSSNEIFRSLPVGYNI 361

Query: 364 MKNEVGRSMTL--DRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAY 423
            K  + + +TL  D     +   G SG   Y INL K +       +ES++ +R+G    
Sbjct: 362 SKQVLDQYLTLLADDPLEFIGKAGDSGGGMYVINLHKALASLSTATLESVIQERFGSRCA 421

Query: 424 RMFRFLSKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHS---LC 483
           R+FR + +   L E +++ D A +   EA  +LY++  + ++ ++++  T P H+     
Sbjct: 422 RIFRLVLQKKHL-EQKQVEDFAMIPAKEAKDMLYKMLSENFISLQEIPKT-PDHAPSRTF 460

Query: 484 LLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL 506
            L+ V+  +    +L   Y +  NL  R+ +E +++K LL
Sbjct: 482 YLYTVNVLSAARMLLHRCYKSIANLIERRQFETKENKRLL 460

[Close]
BLAST of Cp4.1LG09g00940 vs. ExPASy Swiss-Prot
Match: Q9D483 (DNA-directed RNA polymerase III subunit RPC3 OS=Mus musculus OX=10090 GN=Polr3c PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.5e-21
Identity = 120/517 (23.21%), Postives = 221/517 (42.75%), Query Frame = 0 

Query: 4   TQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILIQHN 63
           TQ  IK    ++  HFG +V K+   L+R G   LR++   T+ S  Q+  +L +LI HN
Sbjct: 2   TQAEIKLCSLLLQEHFGEIVEKIGVHLVRTGSQPLRVIAHDTKASLDQVKKALCVLIHHN 61

Query: 64  CVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELLEGL 123
            V          +    +   +Y A  S +L  +R+ ++  I + K       E ++E L
Sbjct: 62  LVL---------YHVHKRGVVEYEAQCSRVLRMLRYPRY--IYTTKTLYGDTGELIVEEL 121

Query: 124 LQNGRLSMEQII----ERAKSSKHAGKFFTWYFLFAFCYLLLSAVFFNMLRNRPSPDVVN 183
           L NG+++M  ++    +R   +   GK   +                           V+
Sbjct: 122 LLNGKMTMSAVVKKVADRLTETMEDGKTMDY-------------------------AEVS 181

Query: 184 ESLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPM 243
            + ++L + HFV+RCP    T S   +  PPP              PTL   ++      
Sbjct: 182 NAFVRLADTHFVQRCPLVPDTDSS--DRGPPP------------PAPTL---VINEKDMY 241

Query: 244 EVIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLR 303
            V + S+         S+  ++   + +K    D  + S D DG I W+ N D F +  R
Sbjct: 242 LVPKLSLIGKGKRRRSSDEDATGEPKAKKPRYTDNKEPSPD-DG-IYWQVNLDRFHQHFR 301

Query: 304 HKACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYE------EVMKN 363
            +A +  V ++ D  +  ++  +L  +  +        T PLS + I+        + K 
Sbjct: 302 DQAIVSAVANRMDQTSSEIVRTMLRMSEITTP-SSAPYTQPLSSNEIFRSLPVGYNISKQ 361

Query: 364 EVGRSMTL--DRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMF 423
            + + +TL  D     +   G SG   + INL K +       +ES++ +R+G    R+F
Sbjct: 362 VLDQYLTLLADDPLEFIGKSGDSGGGMFVINLHKALASLATATLESVIQERFGSRCARIF 421

Query: 424 RFLSKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHS---LCLLW 483
           R + +   L E +++ D A +   EA  +LY++  + ++ ++++  T P H+      L+
Sbjct: 422 RLVLQKKHL-EQKQVEDFAMIPAKEAKDMLYKMLSENFILLQEIPKT-PDHAPSRTFYLY 460

Query: 484 RVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELL 506
            V+  +    +L   Y +  NL  R+ +E +++K LL
Sbjct: 482 TVNVLSAARMLLHRCYKSIANLIERRQFETKENKRLL 460

[Close]
BLAST of Cp4.1LG09g00940 vs. ExPASy Swiss-Prot
Match: Q55FJ5 (DNA-directed RNA polymerase III subunit rpc3 OS=Dictyostelium discoideum OX=44689 GN=polr3c PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.5e-15
Identity = 147/673 (21.84%), Postives = 265/673 (39.38%), Query Frame = 0 

Query: 6   YGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTE----LSSSQINNSLLILIQ 65
           Y  K A+ I+   FG+ V KV E L++RG  + +++ +       L+  +I   LL+LIQ
Sbjct: 2   YEQKVAIDIVKESFGDDVTKVFEFLVQRGKSSYKIINQSLSGKGGLTIKRIKQCLLVLIQ 61

Query: 66  HNCV---QAFTAVTEGEF-----GDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKD 125
           HN V   +    +T+ E      G+   +D+ Y A+  N +HR+RF KF+     K  K 
Sbjct: 62  HNLVTYEEFLLPLTKDEIEKLVPGEPLPSDSVYEAIIVNAIHRLRFPKFINYI--KHSKG 121

Query: 126 KDCEELLEGLLQNGRLSMEQIIERAKSSKHAGKF-----FTWYFLFAFCYLLLSAVFFNM 185
            +   +LE L+ +GRL M+ +I++A   +    F      T  F   F  L++       
Sbjct: 122 DEAAYILEELIDHGRLPMDLLIKQASQIQRVDTFEDQDDITKRFEDTFTKLIMDQFIMRA 181

Query: 186 LRNRPSPDVVNESLLK----------------------------LLNAHFVERCPAPEPT 245
            R RP  D    + L                             L +  F    P     
Sbjct: 182 PRPRPVSDQETSNALSKEAKKVGGGGANGNNVGAHQKKDSDPFALPSVGFSSNGPLSSVD 241

Query: 246 LSPQVEEQ-------------PPPRKRGAKAAKVSEVPPTL--------------EQRLV 305
            S    E              P   K+G  A K S  P +               + R +
Sbjct: 242 NSANDAESLEILTGKSSTTTIPSQPKKGT-AKKTSAKPKSTAINTTATASLGRKRKSRDI 301

Query: 306 ESARPMEVIRFSIGETNTEAEESEHYS-------------SISGQKR-KRGDLD------ 365
                 E     + E N E   ++H S             + +GQ   K+  LD      
Sbjct: 302 YDEDDDEEPDLLVIEENVEINVNDHNSANKNSTTTTTTTTTKTGQHTLKKSKLDQSSSTT 361

Query: 366 ----------MIQESGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGAVNVLSAIL 425
                     M Q+    +  +LW  N+++FI   + KAC + V  + +  +  + +A++
Sbjct: 362 TTSSRQQQNGMDQQRIIDESRVLWTINYEQFIIEFKLKACYDFVTEKNNQQSGLLFNAMV 421

Query: 426 EATRSSEKIVKTEITVPLSLDNIYEEVMKN-EVGRSMTLDRVEASLSAL----------- 485
           +  + S +  +  +T  +  +NI EE  ++ +  + M   ++E  LS +           
Sbjct: 422 KLCKRSIRSNQDSLTSCVYGENILEEYNRDLDSSKKMDKLQIEKYLSIMQASRPSMVTKM 481

Query: 486 -------GCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETE 545
                    S +  Y++N+  II   +   VESI+ +++G +  R+F+ L     L+E +
Sbjct: 482 VSKSKQSSSSELGAYQVNVGNIIGIIKQKMVESIIKQKFGDNGLRVFKLL-LIKNLLEPK 541

Query: 546 KISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHS------LCLLWRVDRYNLWEH 548
           +I++ A +  NE   +L+ + +   + +++    IPR S         L+ VD   +   
Sbjct: 542 QIAELAMIPPNECKALLFNMMQKNIIRLQE----IPRSSDHFANRTFYLFFVDLPTIIAT 601

[Close]
BLAST of Cp4.1LG09g00940 vs. NCBI nr
Match: XP_023541704.1 (DNA-directed RNA polymerase III subunit RPC3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1008 bits (2605), Expect = 0.0
Identity = 522/547 (95.43%), Postives = 522/547 (95.43%), Query Frame = 0 

Query: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60
           MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI
Sbjct: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60

Query: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120
           QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL
Sbjct: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120

Query: 121 EGLLQNGRLSMEQIIERAKSSKHAGKFFTWYFLFAFCYLLLSAVFFNMLRNRPSPDVVNE 180
           EGLLQNGRLSMEQIIERAKSSKHAG                         NRPSPDVVNE
Sbjct: 121 EGLLQNGRLSMEQIIERAKSSKHAG-------------------------NRPSPDVVNE 180

Query: 181 SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME 240
           SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME
Sbjct: 181 SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME 240

Query: 241 VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLRH 300
           VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLRH
Sbjct: 241 VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLRH 300

Query: 301 KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT 360
           KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT
Sbjct: 301 KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT 360

Query: 361 LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL 420
           LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL
Sbjct: 361 LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL 420

Query: 421 VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHSLCLLWRVDRYNLWEHVL 480
           VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHSLCLLWRVDRYNLWEHVL
Sbjct: 421 VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHSLCLLWRVDRYNLWEHVL 480

Query: 481 DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA 540
           DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA
Sbjct: 481 DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA 522

Query: 541 LMLFHDF 547
           LMLFHDF
Sbjct: 541 LMLFHDF 522

[Close]
BLAST of Cp4.1LG09g00940 vs. NCBI nr
Match: XP_022945853.1 (DNA-directed RNA polymerase III subunit RPC3 [Cucurbita moschata])

HSP 1 Score: 1004 bits (2597), Expect = 0.0
Identity = 519/547 (94.88%), Postives = 521/547 (95.25%), Query Frame = 0 

Query: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60
           MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI
Sbjct: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60

Query: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120
           QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL
Sbjct: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120

Query: 121 EGLLQNGRLSMEQIIERAKSSKHAGKFFTWYFLFAFCYLLLSAVFFNMLRNRPSPDVVNE 180
           EGLLQNGRLSMEQIIERAKSSKHAG                         NRP PDVVNE
Sbjct: 121 EGLLQNGRLSMEQIIERAKSSKHAG-------------------------NRPIPDVVNE 180

Query: 181 SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME 240
           SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME
Sbjct: 181 SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME 240

Query: 241 VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLRH 300
           VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEF+RCLRH
Sbjct: 241 VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFVRCLRH 300

Query: 301 KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT 360
           KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT
Sbjct: 301 KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT 360

Query: 361 LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL 420
           LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL
Sbjct: 361 LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL 420

Query: 421 VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHSLCLLWRVDRYNLWEHVL 480
           VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAIT+PRHSLCLLWRVDRYNLWEHVL
Sbjct: 421 VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVL 480

Query: 481 DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA 540
           DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA
Sbjct: 481 DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA 522

Query: 541 LMLFHDF 547
           LMLFHDF
Sbjct: 541 LMLFHDF 522

[Close]
BLAST of Cp4.1LG09g00940 vs. NCBI nr
Match: KAG6574180.1 (DNA-directed RNA polymerase III subunit RPC3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013236.1 DNA-directed RNA polymerase III subunit RPC3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1003 bits (2592), Expect = 0.0
Identity = 519/547 (94.88%), Postives = 520/547 (95.06%), Query Frame = 0 

Query: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60
           MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI
Sbjct: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60

Query: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120
           QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL
Sbjct: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120

Query: 121 EGLLQNGRLSMEQIIERAKSSKHAGKFFTWYFLFAFCYLLLSAVFFNMLRNRPSPDVVNE 180
           EGLLQNGRLSMEQIIERAKSSKHAG                         NRP PDVVNE
Sbjct: 121 EGLLQNGRLSMEQIIERAKSSKHAG-------------------------NRPIPDVVNE 180

Query: 181 SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME 240
           SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME
Sbjct: 181 SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME 240

Query: 241 VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLRH 300
           VIRFSIGETNTEAEESEHYSSISGQKRKRGDLD IQESGDADGIILWRANFDEFIRCLRH
Sbjct: 241 VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDTIQESGDADGIILWRANFDEFIRCLRH 300

Query: 301 KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT 360
           KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT
Sbjct: 301 KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT 360

Query: 361 LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL 420
           LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL
Sbjct: 361 LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL 420

Query: 421 VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHSLCLLWRVDRYNLWEHVL 480
           VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAIT+PRHSLCLLWRVDRYNLWEHVL
Sbjct: 421 VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVL 480

Query: 481 DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA 540
           DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA
Sbjct: 481 DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA 522

Query: 541 LMLFHDF 547
           LMLFHDF
Sbjct: 541 LMLFHDF 522

[Close]
BLAST of Cp4.1LG09g00940 vs. NCBI nr
Match: XP_022968436.1 (DNA-directed RNA polymerase III subunit RPC3 [Cucurbita maxima])

HSP 1 Score: 1001 bits (2587), Expect = 0.0
Identity = 517/547 (94.52%), Postives = 521/547 (95.25%), Query Frame = 0 

Query: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60
           MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLL+RFTELSSSQINNSLLILI
Sbjct: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLIRFTELSSSQINNSLLILI 60

Query: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120
           QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL
Sbjct: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120

Query: 121 EGLLQNGRLSMEQIIERAKSSKHAGKFFTWYFLFAFCYLLLSAVFFNMLRNRPSPDVVNE 180
           EGLLQNGRLSMEQIIERAKSSKHAG                         NRP PDVVNE
Sbjct: 121 EGLLQNGRLSMEQIIERAKSSKHAG-------------------------NRPIPDVVNE 180

Query: 181 SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME 240
           SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME
Sbjct: 181 SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME 240

Query: 241 VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLRH 300
           VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLRH
Sbjct: 241 VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLRH 300

Query: 301 KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT 360
           KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSL+NIYEEVMKNEVGRSMT
Sbjct: 301 KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLENIYEEVMKNEVGRSMT 360

Query: 361 LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL 420
           LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL
Sbjct: 361 LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL 420

Query: 421 VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHSLCLLWRVDRYNLWEHVL 480
           VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAIT+PR+SLCLLWRVDRYNLWEHVL
Sbjct: 421 VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRYSLCLLWRVDRYNLWEHVL 480

Query: 481 DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA 540
           DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA
Sbjct: 481 DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA 522

Query: 541 LMLFHDF 547
           LMLFHDF
Sbjct: 541 LMLFHDF 522

[Close]
BLAST of Cp4.1LG09g00940 vs. NCBI nr
Match: XP_038878061.1 (DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Benincasa hispida] >XP_038878062.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Benincasa hispida])

HSP 1 Score: 927 bits (2395), Expect = 0.0
Identity = 467/547 (85.37%), Postives = 504/547 (92.14%), Query Frame = 0 

Query: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60
           M  TQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLL+RFTEL+SSQ+NNSLLILI
Sbjct: 1   MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLIRFTELTSSQVNNSLLILI 60

Query: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120
           QHNCVQAFTAVTEGEFGDAPKADTQYLALFSN+LHRMRFSKFLAIASEKL KDKDCEELL
Sbjct: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNVLHRMRFSKFLAIASEKLRKDKDCEELL 120

Query: 121 EGLLQNGRLSMEQIIERAKSSKHAGKFFTWYFLFAFCYLLLSAVFFNMLRNRPSPDVVNE 180
           EGLLQNGRLSMEQ++ERA+SSKHAG                         NRP PD+V++
Sbjct: 121 EGLLQNGRLSMEQMVERAQSSKHAG-------------------------NRPIPDIVHD 180

Query: 181 SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME 240
           SL KLLNAHFVERCPAPEP+LSP+VEEQPPP+KRGAKAAK+SEVP TLEQR+VESARPME
Sbjct: 181 SLFKLLNAHFVERCPAPEPSLSPKVEEQPPPKKRGAKAAKISEVPETLEQRVVESARPME 240

Query: 241 VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLRH 300
           V+RFS+G+TNTEAE+SEHYS ISGQKRK  DL+M+Q+SGDAD +ILWRANFDEFIRCLRH
Sbjct: 241 VLRFSMGDTNTEAEKSEHYSQISGQKRKHDDLEMVQDSGDADSVILWRANFDEFIRCLRH 300

Query: 301 KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT 360
           KACIEHVRSQFDDG VNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT
Sbjct: 301 KACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT 360

Query: 361 LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL 420
           LDRVEASLS+LGC GM+DY+INL+KIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL
Sbjct: 361 LDRVEASLSSLGCPGMDDYQINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL 420

Query: 421 VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHSLCLLWRVDRYNLWEHVL 480
           VETEKISDS+FVDKNEAPKILYRLWKDEYLYMEKVA+T+PRHSLCLLWRVDRYNLWEHVL
Sbjct: 421 VETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVL 480

Query: 481 DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA 540
           DEMYHASLNLQLRQAYEME++KELL+LPPD R  PL KR++RL+ VR LL+SSLLKLDDA
Sbjct: 481 DEMYHASLNLQLRQAYEMEENKELLSLPPDNRNEPLMKRFDRLKKVRGLLQSSLLKLDDA 522

Query: 541 LMLFHDF 547
           LMLFHDF
Sbjct: 541 LMLFHDF 522

[Close]
BLAST of Cp4.1LG09g00940 vs. ExPASy TrEMBL
Match: A0A6J1G256 (DNA-directed RNA polymerase III subunit RPC3 OS=Cucurbita moschata OX=3662 GN=LOC111449973 PE=3 SV=1)

HSP 1 Score: 1004 bits (2597), Expect = 0.0
Identity = 519/547 (94.88%), Postives = 521/547 (95.25%), Query Frame = 0 

Query: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60
           MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI
Sbjct: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60

Query: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120
           QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL
Sbjct: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120

Query: 121 EGLLQNGRLSMEQIIERAKSSKHAGKFFTWYFLFAFCYLLLSAVFFNMLRNRPSPDVVNE 180
           EGLLQNGRLSMEQIIERAKSSKHAG                         NRP PDVVNE
Sbjct: 121 EGLLQNGRLSMEQIIERAKSSKHAG-------------------------NRPIPDVVNE 180

Query: 181 SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME 240
           SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME
Sbjct: 181 SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME 240

Query: 241 VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLRH 300
           VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEF+RCLRH
Sbjct: 241 VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFVRCLRH 300

Query: 301 KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT 360
           KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT
Sbjct: 301 KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT 360

Query: 361 LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL 420
           LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL
Sbjct: 361 LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL 420

Query: 421 VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHSLCLLWRVDRYNLWEHVL 480
           VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAIT+PRHSLCLLWRVDRYNLWEHVL
Sbjct: 421 VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVL 480

Query: 481 DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA 540
           DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA
Sbjct: 481 DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA 522

Query: 541 LMLFHDF 547
           LMLFHDF
Sbjct: 541 LMLFHDF 522

[Close]
BLAST of Cp4.1LG09g00940 vs. ExPASy TrEMBL
Match: A0A6J1HUV1 (DNA-directed RNA polymerase III subunit RPC3 OS=Cucurbita maxima OX=3661 GN=LOC111467684 PE=3 SV=1)

HSP 1 Score: 1001 bits (2587), Expect = 0.0
Identity = 517/547 (94.52%), Postives = 521/547 (95.25%), Query Frame = 0 

Query: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60
           MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLL+RFTELSSSQINNSLLILI
Sbjct: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLIRFTELSSSQINNSLLILI 60

Query: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120
           QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL
Sbjct: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120

Query: 121 EGLLQNGRLSMEQIIERAKSSKHAGKFFTWYFLFAFCYLLLSAVFFNMLRNRPSPDVVNE 180
           EGLLQNGRLSMEQIIERAKSSKHAG                         NRP PDVVNE
Sbjct: 121 EGLLQNGRLSMEQIIERAKSSKHAG-------------------------NRPIPDVVNE 180

Query: 181 SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME 240
           SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME
Sbjct: 181 SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME 240

Query: 241 VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLRH 300
           VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLRH
Sbjct: 241 VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLRH 300

Query: 301 KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT 360
           KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSL+NIYEEVMKNEVGRSMT
Sbjct: 301 KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLENIYEEVMKNEVGRSMT 360

Query: 361 LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL 420
           LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL
Sbjct: 361 LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL 420

Query: 421 VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHSLCLLWRVDRYNLWEHVL 480
           VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAIT+PR+SLCLLWRVDRYNLWEHVL
Sbjct: 421 VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITVPRYSLCLLWRVDRYNLWEHVL 480

Query: 481 DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA 540
           DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA
Sbjct: 481 DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA 522

Query: 541 LMLFHDF 547
           LMLFHDF
Sbjct: 541 LMLFHDF 522

[Close]
BLAST of Cp4.1LG09g00940 vs. ExPASy TrEMBL
Match: A0A6J1CHB3 (DNA-directed RNA polymerase III subunit RPC3 OS=Momordica charantia OX=3673 GN=LOC111011656 PE=3 SV=1)

HSP 1 Score: 919 bits (2375), Expect = 0.0
Identity = 472/547 (86.29%), Postives = 499/547 (91.22%), Query Frame = 0 

Query: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60
           M +TQ GIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLL+RFTEL+SSQ+NNSLLILI
Sbjct: 1   MGTTQNGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELNSSQVNNSLLILI 60

Query: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120
           QHNCVQAFT+VTEGEFGDAPK DTQYLALFSNILHRMRFSKFLA+ASEKLEKDK+CEELL
Sbjct: 61  QHNCVQAFTSVTEGEFGDAPKTDTQYLALFSNILHRMRFSKFLAVASEKLEKDKNCEELL 120

Query: 121 EGLLQNGRLSMEQIIERAKSSKHAGKFFTWYFLFAFCYLLLSAVFFNMLRNRPSPDVVNE 180
           EGLLQNGRLSMEQ++ERAKSSKHAG                         NRP PDVV+E
Sbjct: 121 EGLLQNGRLSMEQLVERAKSSKHAG-------------------------NRPIPDVVHE 180

Query: 181 SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME 240
           SL KLL AHFVERCPAPEP LS QVEEQPPP+KRGAKAAK+SEVP TLEQRLV  ARPME
Sbjct: 181 SLFKLLTAHFVERCPAPEPILSAQVEEQPPPKKRGAKAAKISEVPETLEQRLVGVARPME 240

Query: 241 VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLRH 300
           V+RFS+ ETNTEAE+SE    ISGQKRK  +L+ +QESGDADGIILWRANFDEFIRCLRH
Sbjct: 241 VLRFSMSETNTEAEKSE--LPISGQKRKHDELEAVQESGDADGIILWRANFDEFIRCLRH 300

Query: 301 KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT 360
           KACIEHVRSQFDDG VNVLSAILEATRSSEK VKTEITVPLSLDNIYEEVMKNEVGRSMT
Sbjct: 301 KACIEHVRSQFDDGVVNVLSAILEATRSSEKTVKTEITVPLSLDNIYEEVMKNEVGRSMT 360

Query: 361 LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL 420
           LDRVEASLSALGC GM+DYKINL+KIIEQAQI+EVESIVLKRYGRDAYRMFRFLS+TGGL
Sbjct: 361 LDRVEASLSALGCPGMDDYKINLRKIIEQAQIEEVESIVLKRYGRDAYRMFRFLSRTGGL 420

Query: 421 VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHSLCLLWRVDRYNLWEHVL 480
           VETEKISDS+FVDKNEAPKILYRLWKDEYLYMEKVA+T PRHSLCLLWRVD+YNLWEHVL
Sbjct: 421 VETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTGPRHSLCLLWRVDKYNLWEHVL 480

Query: 481 DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA 540
           DEMYHASLNLQLRQAYEMEQDKELL+LPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA
Sbjct: 481 DEMYHASLNLQLRQAYEMEQDKELLSLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA 520

Query: 541 LMLFHDF 547
           LMLFHDF
Sbjct: 541 LMLFHDF 520

[Close]
BLAST of Cp4.1LG09g00940 vs. ExPASy TrEMBL
Match: A0A1S3AYY3 (DNA-directed RNA polymerase III subunit RPC3 OS=Cucumis melo OX=3656 GN=LOC103484083 PE=3 SV=1)

HSP 1 Score: 872 bits (2253), Expect = 0.0
Identity = 441/547 (80.62%), Postives = 485/547 (88.67%), Query Frame = 0 

Query: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60
           M  TQYGIKYAVHI+TAHFGNLVAKVCETLLR+GPLTLRLL+RFTEL+ SQ+NNSLLILI
Sbjct: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60

Query: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120
           QHNCVQAFT VTEGEFGDAPK DTQYLALFSNILHRMRFSKFLAIAS+KL +DK+C+ELL
Sbjct: 61  QHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKFLAIASQKLGQDKNCQELL 120

Query: 121 EGLLQNGRLSMEQIIERAKSSKHAGKFFTWYFLFAFCYLLLSAVFFNMLRNRPSPDVVNE 180
           EGLLQNGRLSMEQ++ERA+SS  AG                         NRP PDVV++
Sbjct: 121 EGLLQNGRLSMEQMVERAESSGRAG-------------------------NRPIPDVVHD 180

Query: 181 SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME 240
           SL KLLNAHFVERCPAPEPTLSP+VEEQPPPRKRGAKAAK+ EVP TLEQRL+E+ARP+E
Sbjct: 181 SLFKLLNAHFVERCPAPEPTLSPKVEEQPPPRKRGAKAAKIFEVPETLEQRLIEAARPVE 240

Query: 241 VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLRH 300
           V+RFS+G+TN EAE+SEHYS ISGQKRK  +L++ Q+SG ADG ILWRAN+DEFIRCLRH
Sbjct: 241 VLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRH 300

Query: 301 KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT 360
           KAC+EHVRSQFDDG VNVLSA LEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT
Sbjct: 301 KACVEHVRSQFDDGVVNVLSAFLEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT 360

Query: 361 LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL 420
           LDRVEASL+ALGC GM+DYKINL++I+EQAQ DEVESIVLKRYGRDAYRMFRFLSKTGGL
Sbjct: 361 LDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGL 420

Query: 421 VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHSLCLLWRVDRYNLWEHVL 480
           VETEKISDS+FVDKNEAPKILYRLWKDEYLYMEKVAIT+PRHSLCLLWRVDRYNLWEHVL
Sbjct: 421 VETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVL 480

Query: 481 DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA 540
           DEMYHASLNLQLR A+E+E++KELL+LP D    PL K+ +    VR LL SSL+KLDDA
Sbjct: 481 DEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFEKVRNLLRSSLVKLDDA 522

Query: 541 LMLFHDF 547
           LMLFHDF
Sbjct: 541 LMLFHDF 522

[Close]
BLAST of Cp4.1LG09g00940 vs. ExPASy TrEMBL
Match: A0A0A0LBF3 (DNA-directed RNA polymerase III subunit RPC3 OS=Cucumis sativus OX=3659 GN=Csa_3G182170 PE=3 SV=1)

HSP 1 Score: 865 bits (2234), Expect = 1.68e-313
Identity = 441/547 (80.62%), Postives = 485/547 (88.67%), Query Frame = 0 

Query: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60
           M  TQYGIKYAVHI+TAHFGNLVAKVCETLLR+GPLTLRLL+RFTEL+ SQ+NNSLLILI
Sbjct: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60

Query: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120
           QHNCVQAFT VTEGEFGDAPK DT YLALFSNILHRMRFSKF+AIAS+KL +DK+C+ELL
Sbjct: 61  QHNCVQAFTDVTEGEFGDAPKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELL 120

Query: 121 EGLLQNGRLSMEQIIERAKSSKHAGKFFTWYFLFAFCYLLLSAVFFNMLRNRPSPDVVNE 180
           EGLLQNGRLSMEQ++ERA+SS  AG                         N P  DVV++
Sbjct: 121 EGLLQNGRLSMEQLVERAESSGRAG-------------------------NHPISDVVHD 180

Query: 181 SLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPME 240
           SL KLLNAHFVERCPAPEPTLSP+VEE PPPRKRGAKAAK+SEVP TLEQRL+E+ARP+E
Sbjct: 181 SLFKLLNAHFVERCPAPEPTLSPKVEE-PPPRKRGAKAAKISEVPETLEQRLIEAARPVE 240

Query: 241 VIRFSIGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRCLRH 300
           V+RFS+G+TN EAE+SEH+S ISGQKRK  DL++ Q+SGDADG ILWRAN+DEFIRCLRH
Sbjct: 241 VLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRH 300

Query: 301 KACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT 360
           KACIEHVRSQFDDG VNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT
Sbjct: 301 KACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMT 360

Query: 361 LDRVEASLSALGCSGMEDYKINLQKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGL 420
           LDRVEASL+ALGC GM+DYKINL++IIEQAQ DEVESIVLKRYGRDAYRMFRFLSKTGGL
Sbjct: 361 LDRVEASLAALGCPGMDDYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGL 420

Query: 421 VETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIPRHSLCLLWRVDRYNLWEHVL 480
           VETEKISDS+FVDKNEAPKILYRLWKDEYLYMEKVA+T+PRHSLCLLWRVDRYNLWEHVL
Sbjct: 421 VETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVL 480

Query: 481 DEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNVRILLESSLLKLDDA 540
           DEMYHASLNLQLR A+E+E++KELL+LP D    PL K+ +   NVR LL SSL+KLDDA
Sbjct: 481 DEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFENVRNLLRSSLVKLDDA 521

Query: 541 LMLFHDF 547
           LMLFHDF
Sbjct: 541 LMLFHDF 521

[Close]
BLAST of Cp4.1LG09g00940 vs. TAIR 10
Match: AT3G49000.1 (RNA polymerase III subunit RPC82 family protein )

HSP 1 Score: 448.0 bits (1151), Expect = 1.1e-125
Identity = 249/561 (44.39%), Postives = 370/561 (65.95%), Query Frame = 0 

Query: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTE--LSSSQINNSLLI 60
           M+ +++GI YA+HIIT  FG++V+KVCE LLR+GPL+ R + R  E  ++ +++ + L +
Sbjct: 1   MSMSEFGIVYAIHIITVQFGSVVSKVCECLLRKGPLSSRDISRLAESDINHNKVKDILYL 60

Query: 61  LIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEE 120
           LIQHNCVQAF+   E   G   KA  QY+ LF+NILHR+R++KF  I +E+L  D  C  
Sbjct: 61  LIQHNCVQAFS--IEPPDGSESKAIVQYIVLFNNILHRVRYNKFSRIVNEEL--DSKCGA 120

Query: 121 LLEGLLQNGRLSMEQIIERAKSSKHAGKFFTWYFLFAFCYLLLSAVFFNMLRNRPSPDVV 180
           +L+GLL NGRL++ Q IER + S                             N    + +
Sbjct: 121 VLDGLLSNGRLTLGQFIERDRDS----------------------------GNTIGSEAI 180

Query: 181 NESLLKLLNAHFVERCPAPEPTLSPQVEEQPPPRKRGAKAAKVSEVPPTLEQRLVESARP 240
            +SL KL+ A FVER P+PEP L    +E+ P ++RGAKAAK+ + P TLE+++VE+A P
Sbjct: 181 RDSLQKLVAARFVERIPSPEPVLGN--KEKEPAKRRGAKAAKILKEPETLEEQVVEAATP 240

Query: 241 MEVIRFS-IGETNTEAEESEHYSSISGQKRKRGDLDMIQESGDADGIILWRANFDEFIRC 300
           ++ IRF  I E ++ +  ++  S+I+  KRK+ D+D    + D+   ++WR NF+EFI  
Sbjct: 241 VDAIRFPLIFEEDSNSSLADDNSNITEGKRKQRDVD----TSDSSSGVIWRPNFEEFIHR 300

Query: 301 LRHKACIEHVRSQFDDGAVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGR 360
           LRHKAC+E V+ + D+G   VL A+LE  RS EK VKT+ + P+S+ +IYEEV+K E GR
Sbjct: 301 LRHKACVEIVKERRDEGCAIVLRAMLEVGRSQEKKVKTDNSAPMSVGSIYEEVIKTEAGR 360

Query: 361 SMTLDRVEASLSALGCSGM----------EDYKINLQKIIEQAQIDEVESIVLKRYGRDA 420
           +M  +RVEA L  L  +            + Y ++ + II  AQ DE+E++V++RYG++A
Sbjct: 361 TMLQERVEACLDQLSATSSYLPAFVNEVNDSYIVDYKSIISVAQKDEIEAVVMRRYGKEA 420

Query: 421 YRMFRFLSKTGGLVETEKISDSAFVDKNEAPKILYRLWKDEYLYMEKVAITIP-RHSLCL 480
           +RMFR+LS+ G  VET+KI+D+A  +K + P+ L ++WKD YL+M+K+A+T P  ++  L
Sbjct: 421 FRMFRYLSQEGRFVETDKIADAALTEKKDTPQFLLKMWKDGYLHMQKLAVTAPGMYTPFL 480

Query: 481 LWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEQDKELLNLPPDKRGGPLEKRYNRLRNV 540
           LW+V++  +   +LDEMYHASLNL LR A+E+E +KELL LP DK  GPL++R  +++  
Sbjct: 481 LWKVNKLIVTTQMLDEMYHASLNLSLRLAHELEAEKELLLLPLDKLEGPLKERLKKVKAK 523

Query: 541 RILLESSLLKLDDALMLFHDF 548
           R+LL S++ KLDDA+MLFHDF
Sbjct: 541 RLLLSSTMFKLDDAIMLFHDF 523

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g00940 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9BUI44.1e-2424.62DNA-directed RNA polymerase III subunit RPC3 OS=Homo sapiens OX=9606 GN=POLR3C P... [more]
Q2TBL41.6e-2324.66DNA-directed RNA polymerase III subunit RPC3 OS=Bos taurus OX=9913 GN=POLR3C PE=... [more]
Q5XIL32.9e-2223.08DNA-directed RNA polymerase III subunit RPC3 OS=Rattus norvegicus OX=10116 GN=Po... [more]
Q9D4832.5e-2123.21DNA-directed RNA polymerase III subunit RPC3 OS=Mus musculus OX=10090 GN=Polr3c ... [more]
Q55FJ53.5e-1521.84DNA-directed RNA polymerase III subunit rpc3 OS=Dictyostelium discoideum OX=4468... [more]
BLAST of Cp4.1LG09g00940 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023541704.10.095.43DNA-directed RNA polymerase III subunit RPC3 [Cucurbita pepo subsp. pepo][more]
XP_022945853.10.094.88DNA-directed RNA polymerase III subunit RPC3 [Cucurbita moschata][more]
KAG6574180.10.094.88DNA-directed RNA polymerase III subunit RPC3, partial [Cucurbita argyrosperma su... [more]
XP_022968436.10.094.52DNA-directed RNA polymerase III subunit RPC3 [Cucurbita maxima][more]
XP_038878061.10.085.37DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Benincasa hispida] >XP_... [more]
BLAST of Cp4.1LG09g00940 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G2560.094.88DNA-directed RNA polymerase III subunit RPC3 OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A6J1HUV10.094.52DNA-directed RNA polymerase III subunit RPC3 OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1CHB30.086.29DNA-directed RNA polymerase III subunit RPC3 OS=Momordica charantia OX=3673 GN=L... [more]
A0A1S3AYY30.080.62DNA-directed RNA polymerase III subunit RPC3 OS=Cucumis melo OX=3656 GN=LOC10348... [more]
A0A0A0LBF31.68e-31380.62DNA-directed RNA polymerase III subunit RPC3 OS=Cucumis sativus OX=3659 GN=Csa_3... [more]
BLAST of Cp4.1LG09g00940 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G49000.11.1e-12544.39RNA polymerase III subunit RPC82 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013197RNA polymerase III subunit RPC82-related, helix-turn-helixPFAMPF08221HTH_9coord: 10..69
e-value: 1.4E-22
score: 79.5
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 3..76
e-value: 3.4E-22
score: 80.4
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 290..382
e-value: 3.3E-8
score: 36.1
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 383..471
e-value: 5.7E-20
score: 73.1
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 91..201
e-value: 7.7E-18
score: 66.2
IPR008806RNA polymerase III Rpc82, C -terminalPFAMPF05645RNA_pol_Rpc82coord: 181..363
e-value: 5.5E-17
score: 62.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..221
IPR039748DNA-directed RNA polymerase III subunit RPC3PANTHERPTHR12949RNA POLYMERASE III DNA DIRECTED -RELATEDcoord: 4..547

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g00940.1Cp4.1LG09g00940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005666 RNA polymerase III complex
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0003697 single-stranded DNA binding
molecular_function GO:0003677 DNA binding