Cp4.1LG09g00290 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g00290
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	thylakoid lumenal 17.4 kDa protein, chloroplastic-like
Location	Cp4.1LG09: 141765 .. 144167 (-)
RNA-Seq Expression	Cp4.1LG09g00290
Synteny	Cp4.1LG09g00290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAGGAGCTTGAATCATGAACAGAGCTTTGCTTTTGTTTTCCTTGGGAACTCAATAATGTAATGTGCTTGTCCTCCTCACAATTTTCTTTTTTTTTTTTTTTAGCCATAATCCTACGTGTACTGCCACGCCATCAATATCGGATCCCCAACATCTCAGAACGGATAAGTGAAGCACAGGGACCGAAGGAGAGGGAATTCATTTTTCCAAATGGCCGCTTTATCAATTCCACTCTCTCAGAATGGTTTCTCTCGCAGCTTCTACTCTGCAAAACGCCCACAGCTTATATCCCCACTTGCCCCTTCCCTCGCCCGTATCACTTGCTGTGGTTAGTTCTTCTTCGACCTCTTCTTTCTTTTTTTCAACTCACTTTAGTTTTATGCATTGATTTACTTGAACGATTGCTCCCCACATCGTACCCTTTTTGTGGGTAAATTGCATTAGAATCTGGGGAGAACTGTTTTCCTTTTCCCGGTCTCTGCCCTTTGCTGCATATTATGTTGTTAGGATCAGGATGCTGGTTATGGGTAAATGCATTGAGTGATCTCTAAATTGGTAAAAATTCCTGTTTTTGCATACCCTTTGATGTGCTTGGGGGAACGCAATTTGAGCTCAACCCCATCGTGTGTATTCAATCGTTATGACTTATGTTTAATGGAGCCTTATCTGCAATGCCATTTTATTAACTGATCAAACAAGTGTCCGTGTGGTTCAATTGCAGCTACTGTGGATGGGGCTGAACCAAAAGAGAGCTTGTCACCTTGCAAGCACATTGGTACCGCAGCTTGTGGTCTTCTTGCTGTTTGGGCTTTGACAAATACCACTCCTGTGATTGCAGCTACTCAGGTCAATAGCCTATCACATTTCTCCATCCACATGGCTTGAGGCAATTAACAATTAATACCCACATCTGTGACATTCTTCGCTTTCAGGCATTTCATTAAATGATCAATTTGGAGTTTATGCATTTTCTGCTGATTTATAGTTTATACGTTTGAGTTTTGTGTATTAGAAGTGTGTAGCGTAGATAAATTTTCAACTATTTGGAGTGTATTGACATGACCTTTTAGAATAATGAATTGCTATTCAAATTTATCTGATGTTTGGGTACGTGAGATAAAAATTCCCAGGCGCCATTCCAAACCCACGAACTTGCATCTAAACTTGGGTTAAGGACATCTTGTAATAGTCTTGTGAGATCCTATATCGGTTGGGGAGTGGGAACGAAACATTCTTTATAAGAGTGTAGAACCTCTCCCTAGCGGACGCGTTTTAAAACCTTGAGAGTAACCGTGGAAGGAAAAGCCCCAAGAGGACAATATCTGCTAGCGGTGGACTTAGACGGTTACAAATAGTATCAATTGGAGAGGGAAACGAAACATTCTTTTTAAGAGTGTGGAAACATCTCCGTAGCAGATGCGTTTTTAAGAGTGTGGAAACATCTTCTTTTTTTACGTTCTTCCTTTTATAGTCATGATCAACAAAATTCGTTCACTTTGTGTGGCAAGTGTGAAACAACTCATTATATTTAACCTCGAGAAATAAACCTGTTGAACTGATAATATAATATGTGGGACTTGCAGAGGCTTCCTCCACTGTCGACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAACACTATAGGTCAAGCAAATGGTGTGTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAGCCAGTTAAAAGGGAAATCTCTTGCTGCTGCGTTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCATATGCCGTTGGAGCCAGCTTCAAGGGTAAAATTCTCTCTATCTTACCCCAACTCCAATAGCCAGGCGGAAAGGAGAAAGACTTTGATTTTCATTCATCTAAAGCTGGTCATTTGGATCTCCCAACTCTAAAATCATGTATTAATACTCATAACACGGGTTCAAACATCATGACAACATTGCATATTGCAGGTGTCGATTTCTCGAACGCAGTTCTAGATAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTCGTTCAAGAACACTGTACTTTCAGGGTCCACATTTGATGATGCTCAATTACAGGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTGTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGATTTCAATATAGTCTGTGTATGTATTGTATTGTATAAACAACTTAAATGATTTTGGTAAGTAATACATATTCAAAGAGACAACTCCCTCTAACTTCTGTTGAAGAACAATGTGGTGTCACTGTCAAGTTCTAGTTGTTTCCTTAGGAACAAAATCTGATGTTTTTTCTTTGAGTATACTCTTAAC

mRNA sequence

TGGAGGAGCTTGAATCATGAACAGAGCTTTGCTTTTGTTTTCCTTGGGAACTCAATAATGTAATGTGCTTGTCCTCCTCACAATTTTCTTTTTTTTTTTTTTTAGCCATAATCCTACGTGTACTGCCACGCCATCAATATCGGATCCCCAACATCTCAGAACGGATAAGTGAAGCACAGGGACCGAAGGAGAGGGAATTCATTTTTCCAAATGGCCGCTTTATCAATTCCACTCTCTCAGAATGGTTTCTCTCGCAGCTTCTACTCTGCAAAACGCCCACAGCTTATATCCCCACTTGCCCCTTCCCTCGCCCGTATCACTTGCTGTGCTACTGTGGATGGGGCTGAACCAAAAGAGAGCTTGTCACCTTGCAAGCACATTGGTACCGCAGCTTGTGGTCTTCTTGCTGTTTGGGCTTTGACAAATACCACTCCTGTGATTGCAGCTACTCAGAGGCTTCCTCCACTGTCGACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAACACTATAGGTCAAGCAAATGGTGTGTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAGCCAGTTAAAAGGGAAATCTCTTGCTGCTGCGTTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCATATGCCGTTGGAGCCAGCTTCAAGGGTGTCGATTTCTCGAACGCAGTTCTAGATAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTCGTTCAAGAACACTGTACTTTCAGGGTCCACATTTGATGATGCTCAATTACAGGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTGTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGATTTCAATATAGTCTGTGTATGTATTGTATTGTATAAACAACTTAAATGATTTTGGTAAGTAATACATATTCAAAGAGACAACTCCCTCTAACTTCTGTTGAAGAACAATGTGGTGTCACTGTCAAGTTCTAGTTGTTTCCTTAGGAACAAAATCTGATGTTTTTTCTTTGAGTATACTCTTAAC

Coding sequence (CDS)

ATGGCCGCTTTATCAATTCCACTCTCTCAGAATGGTTTCTCTCGCAGCTTCTACTCTGCAAAACGCCCACAGCTTATATCCCCACTTGCCCCTTCCCTCGCCCGTATCACTTGCTGTGCTACTGTGGATGGGGCTGAACCAAAAGAGAGCTTGTCACCTTGCAAGCACATTGGTACCGCAGCTTGTGGTCTTCTTGCTGTTTGGGCTTTGACAAATACCACTCCTGTGATTGCAGCTACTCAGAGGCTTCCTCCACTGTCGACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAACACTATAGGTCAAGCAAATGGTGTGTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAGCCAGTTAAAAGGGAAATCTCTTGCTGCTGCGTTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCATATGCCGTTGGAGCCAGCTTCAAGGGTGTCGATTTCTCGAACGCAGTTCTAGATAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTCGTTCAAGAACACTGTACTTTCAGGGTCCACATTTGATGATGCTCAATTACAGGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTGTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA

Protein sequence

MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCATVDGAEPKESLSPCKHIGTAACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

Homology

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BLAST of Cp4.1LG09g00290 vs. ExPASy Swiss-Prot
Match: P81760 (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL17 PE=1 SV=2)

HSP 1 Score: 292.4 bits (747), Expect = 4.8e-78
Identity = 151/240 (62.92%), Postives = 185/240 (77.08%), Query Frame = 0


Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCA---TVDGAEPKESLSPCKHI 60
           MA+L +  ++N  S  F+S      +     SL  + C A     +G   K+SL P K +
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSAGENRENGEGVKKSLFPLKEL 60

Query: 61  GTAACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRF 120
           G+ AC  L    LT  +PVIAA QRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRF
Sbjct: 61  GSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRF 120

Query: 121 CDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNF 180
           CDYTN+++ LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNF
Sbjct: 121 CDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNF 180

Query: 181 GKANLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           GK+NL+GA F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Sbjct: 181 GKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR 236

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BLAST of Cp4.1LG09g00290 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.5e-10
Identity = 67/251 (26.69%), Postives = 103/251 (41.04%), Query Frame = 0


Query: 1   MAALSIPLSQNGFSRSFYSAKRPQL----------ISPLAPSLARITCCATVDGAEPKES 60
           M +L I  S +  SRS Y  +R  L          +     S  R  CC++ +    K  
Sbjct: 11  MKSLDISRSSSSVSRSPYHFQRYLLRRLQLSSRSNLEIKDSSNTREGCCSSAESNTWKRI 70

Query: 61  LSPCKHIGTAACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYD 120
           LS                       VIA++  +P ++ E NR E A      G  +    
Sbjct: 71  LSAAM-----------------AAAVIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQY 130

Query: 121 KPIDLRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNA 180
              DL    ++NE    +  +  +A M E+ F G+  +   + KA A  A+F G D S+ 
Sbjct: 131 GSADLSKTVHSNE--NFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDT 190

Query: 181 VLDRVNFGKANLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPT 237
           ++DR+   +ANL  A    +VL+ S    A+++ A F D +I  +  Q LC      NP 
Sbjct: 191 LMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPL 240

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BLAST of Cp4.1LG09g00290 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.7e-06
Identity = 35/119 (29.41%), Postives = 56/119 (47.06%), Query Frame = 0


Query: 129 GKSLAAAL-----MSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQ 188
           GKSL  A      ++++ F  ADL   V + +  +GA   G D +N +    +F  A+L 
Sbjct: 61  GKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIGADLHGADLTNGLAYLTSFKGADLT 120

Query: 189 GASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGCR 238
            A     ++  + FDDA++  A F   ++   ++ KLC     VNP      R  LGC+
Sbjct: 121 NAVLTEAIMMRTKFDDAKITGADFSLAVLDVYEVDKLCDRADGVNPKTGVSTRESLGCQ 179

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BLAST of Cp4.1LG09g00290 vs. ExPASy Swiss-Prot
Match: P74221 (Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1152 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.1e-05
Identity = 31/98 (31.63%), Postives = 53/98 (54.08%), Query Frame = 0


Query: 126 QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGA 185
           Q+    L  A +++A    ADL++  +  A+AV  +FKG   S A L       ANL+GA
Sbjct: 91  QMNWADLTYAKLNQADLSHADLTKASLYGAFAVKTNFKGAKLSGATL-----AHANLRGA 150

Query: 186 SFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 224
           + + T L+G+    A L++A F+     + +LQ+ C++
Sbjct: 151 NLEQTNLTGANLFAANLREANFQKADFSWANLQEACLS 183

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BLAST of Cp4.1LG09g00290 vs. ExPASy Swiss-Prot
Match: O22160 (Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g44920 PE=1 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 5.9e-04
Identity = 32/87 (36.78%), Postives = 44/87 (50.57%), Query Frame = 0


Query: 124 KSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQ 183
           ++  KG  L  A   +A   GADLSE          A  +G DFS A + +VN   ANL+
Sbjct: 120 QANFKGAKLLGASFFDADLTGADLSE----------ADLRGADFSLANVTKVNLTNANLE 179

Query: 184 GA------SFKNTVLSGSTFDDAQLQD 205
           GA      SFK + ++G+ F D  L+D
Sbjct: 180 GATVTGNTSFKGSNITGADFTDVPLRD 196

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BLAST of Cp4.1LG09g00290 vs. NCBI nr
Match: XP_023541447.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471 bits (1211), Expect = 2.77e-167
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCATVDGAEPKESLSPCKHIGTA 60
           MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCATVDGAEPKESLSPCKHIGTA
Sbjct: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCATVDGAEPKESLSPCKHIGTA 60

Query: 61  ACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

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BLAST of Cp4.1LG09g00290 vs. NCBI nr
Match: KAG6574243.1 (Thylakoid lumenal 17.4 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 456 bits (1173), Expect = 1.72e-161
Identity = 231/237 (97.47%), Postives = 231/237 (97.47%), Query Frame = 0


Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCATVDGAEPKESLSPCKHIGTA 60
           MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLA ITC A VDGAEPKESLSPCKHIGT 
Sbjct: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60

Query: 61  ACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGA FKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of Cp4.1LG09g00290 vs. NCBI nr
Match: XP_022968163.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 456 bits (1172), Expect = 2.45e-161
Identity = 228/237 (96.20%), Postives = 230/237 (97.05%), Query Frame = 0


Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCATVDGAEPKESLSPCKHIGTA 60
           MA  SIPLSQNGF RSFYSAKRPQL+SPLAPSLARITCCATVDGAEPKESLS CKHIGT 
Sbjct: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60

Query: 61  ACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWALTNTTPV AATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGA FKNTV+SGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of Cp4.1LG09g00290 vs. NCBI nr
Match: XP_022945269.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucurbita moschata])

HSP 1 Score: 455 bits (1170), Expect = 4.94e-161
Identity = 230/237 (97.05%), Postives = 231/237 (97.47%), Query Frame = 0


Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCATVDGAEPKESLSPCKHIGTA 60
           MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLA ITC A VDGAEPKESLSPCKHIGT 
Sbjct: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60

Query: 61  ACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TN+KSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGA FKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of Cp4.1LG09g00290 vs. NCBI nr
Match: XP_008455988.1 (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo])

HSP 1 Score: 429 bits (1102), Expect = 1.15e-150
Identity = 214/237 (90.30%), Postives = 223/237 (94.09%), Query Frame = 0


Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCATVDGAEPKESLSPCKHIGTA 60
           MA LSIP SQNGFSRSF+S KRPQ++ P   SL RITC AT DGA+P+E+LSPCKHI T 
Sbjct: 1   MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 60

Query: 61  ACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWALTNT+PVIAA QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEK+QLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGA FKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of Cp4.1LG09g00290 vs. ExPASy TrEMBL
Match: A0A6J1HX78 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467480 PE=4 SV=1)

HSP 1 Score: 456 bits (1172), Expect = 1.19e-161
Identity = 228/237 (96.20%), Postives = 230/237 (97.05%), Query Frame = 0


Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCATVDGAEPKESLSPCKHIGTA 60
           MA  SIPLSQNGF RSFYSAKRPQL+SPLAPSLARITCCATVDGAEPKESLS CKHIGT 
Sbjct: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60

Query: 61  ACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWALTNTTPV AATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGA FKNTV+SGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of Cp4.1LG09g00290 vs. ExPASy TrEMBL
Match: A0A6J1G0I9 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449567 PE=4 SV=1)

HSP 1 Score: 455 bits (1170), Expect = 2.39e-161
Identity = 230/237 (97.05%), Postives = 231/237 (97.47%), Query Frame = 0


Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCATVDGAEPKESLSPCKHIGTA 60
           MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLA ITC A VDGAEPKESLSPCKHIGT 
Sbjct: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60

Query: 61  ACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TN+KSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGA FKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of Cp4.1LG09g00290 vs. ExPASy TrEMBL
Match: A0A1S3C2V7 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496052 PE=4 SV=1)

HSP 1 Score: 429 bits (1102), Expect = 5.55e-151
Identity = 214/237 (90.30%), Postives = 223/237 (94.09%), Query Frame = 0


Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCATVDGAEPKESLSPCKHIGTA 60
           MA LSIP SQNGFSRSF+S KRPQ++ P   SL RITC AT DGA+P+E+LSPCKHI T 
Sbjct: 1   MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 60

Query: 61  ACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWALTNT+PVIAA QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEK+QLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGA FKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of Cp4.1LG09g00290 vs. ExPASy TrEMBL
Match: A0A6J1CH87 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011411 PE=4 SV=1)

HSP 1 Score: 427 bits (1099), Expect = 1.59e-150
Identity = 214/237 (90.30%), Postives = 221/237 (93.25%), Query Frame = 0


Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCATVDGAEPKESLSPCKHIGTA 60
           MA LS PLSQNGFSR FYSAKR QLISP   SLAR +CCAT +GA+PKESLSPC  IGT 
Sbjct: 1   MATLSAPLSQNGFSRRFYSAKRRQLISPFPRSLARFSCCATGEGAQPKESLSPCNRIGTV 60

Query: 61  ACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWALTNT+PVIAA QRLPPLSTEPNRCERA+VGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAYVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEK+QLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFKG DFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGADFSNAVLDRVNFGKA 180

Query: 181 NLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGA FKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTI PEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIGPEGRAELGCR 237

[Close]

BLAST of Cp4.1LG09g00290 vs. ExPASy TrEMBL
Match: A0A6J1JAQ7 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482783 PE=4 SV=1)

HSP 1 Score: 427 bits (1097), Expect = 1.35e-149
Identity = 213/237 (89.87%), Postives = 221/237 (93.25%), Query Frame = 0


Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCATVDGAEPKESLSPCKHIGTA 60
           MA LSIP SQNGFSR F+SAK P +I+P + SLARI+C A  DGAEP+ESLSPC HIG+ 
Sbjct: 41  MATLSIPFSQNGFSRRFFSAKHPPIIAPFSHSLARISCSANRDGAEPRESLSPCNHIGSV 100

Query: 61  ACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWALTNT+P  AA QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 101 ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 160

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 161 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 220

Query: 181 NLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGA FKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 221 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 277

[Close]

BLAST of Cp4.1LG09g00290 vs. TAIR 10
Match: AT5G53490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 292.4 bits (747), Expect = 3.4e-79
Identity = 151/240 (62.92%), Postives = 185/240 (77.08%), Query Frame = 0


Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCA---TVDGAEPKESLSPCKHI 60
           MA+L +  ++N  S  F+S      +     SL  + C A     +G   K+SL P K +
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSAGENRENGEGVKKSLFPLKEL 60

Query: 61  GTAACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRF 120
           G+ AC  L    LT  +PVIAA QRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRF
Sbjct: 61  GSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRF 120

Query: 121 CDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNF 180
           CDYTN+++ LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNF
Sbjct: 121 CDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNF 180

Query: 181 GKANLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           GK+NL+GA F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Sbjct: 181 GKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR 236

[Close]

BLAST of Cp4.1LG09g00290 vs. TAIR 10
Match: AT5G53490.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 291.2 bits (744), Expect = 7.5e-79
Identity = 150/239 (62.76%), Postives = 184/239 (76.99%), Query Frame = 0


Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCA--TVDGAEPKESLSPCKHIG 60
           MA+L +  ++N  S  F+S      +     SL  + C      +G   K+SL P K +G
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSGENRENGEGVKKSLFPLKELG 60

Query: 61  TAACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFC 120
           + AC  L    LT  +PVIAA QRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRFC
Sbjct: 61  SIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRFC 120

Query: 121 DYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFG 180
           DYTN+++ LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNFG
Sbjct: 121 DYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFG 180

Query: 181 KANLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           K+NL+GA F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Sbjct: 181 KSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR 235

[Close]

BLAST of Cp4.1LG09g00290 vs. TAIR 10
Match: AT5G53490.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 289.3 bits (739), Expect = 2.9e-78
Identity = 152/254 (59.84%), Postives = 186/254 (73.23%), Query Frame = 0


Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCATV-----------------D 60
           MA+L +  ++N  S  F+S      +     SL  + C A V                 +
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSAKVVYVILICIMFSAGENREN 60

Query: 61  GAEPKESLSPCKHIGTAACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIG 120
           G   K+SL P K +G+ AC  L    LT  +PVIAA QRLPPLSTEP+RCE+AFVGNTIG
Sbjct: 61  GEGVKKSLFPLKELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIG 120

Query: 121 QANGVYDKPIDLRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK 180
           QANGVYDKP+DLRFCDYTN+++ LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFK
Sbjct: 121 QANGVYDKPLDLRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFK 180

Query: 181 GVDFSNAVLDRVNFGKANLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 238
           GV+F+NAV+DRVNFGK+NL+GA F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N
Sbjct: 181 GVNFTNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRN 240

[Close]

BLAST of Cp4.1LG09g00290 vs. TAIR 10
Match: AT1G12250.2 (Pentapeptide repeat-containing protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-11
Identity = 50/166 (30.12%), Postives = 79/166 (47.59%), Query Frame = 0


Query: 76  VIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSQLKGKSLAAA 135
           VIA++  +P ++ E NR E A      G  +       DL    ++NE    +  +  +A
Sbjct: 5   VIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQYGSADLSKTVHSNE--NFRRANFTSA 64

Query: 136 LMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGASFKNTVLSGS 195
            M E+ F G+  +   + KA A  A+F G D S+ ++DR+   +ANL  A    +VL+ S
Sbjct: 65  DMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRS 124

Query: 196 TFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 237
               A+++ A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 125 DLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 166

[Close]

BLAST of Cp4.1LG09g00290 vs. TAIR 10
Match: AT1G12250.1 (Pentapeptide repeat-containing protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.8e-11
Identity = 67/251 (26.69%), Postives = 103/251 (41.04%), Query Frame = 0


Query: 1   MAALSIPLSQNGFSRSFYSAKRPQL----------ISPLAPSLARITCCATVDGAEPKES 60
           M +L I  S +  SRS Y  +R  L          +     S  R  CC++ +    K  
Sbjct: 11  MKSLDISRSSSSVSRSPYHFQRYLLRRLQLSSRSNLEIKDSSNTREGCCSSAESNTWKRI 70

Query: 61  LSPCKHIGTAACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYD 120
           LS                       VIA++  +P ++ E NR E A      G  +    
Sbjct: 71  LSAAM-----------------AAAVIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQY 130

Query: 121 KPIDLRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNA 180
              DL    ++NE    +  +  +A M E+ F G+  +   + KA A  A+F G D S+ 
Sbjct: 131 GSADLSKTVHSNE--NFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDT 190

Query: 181 VLDRVNFGKANLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPT 237
           ++DR+   +ANL  A    +VL+ S    A+++ A F D +I  +  Q LC      NP 
Sbjct: 191 LMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPL 240

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g00290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P81760	4.8e-78	62.92	Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
Q8H1Q1	2.5e-10	26.69	Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
B1WVN5	1.7e-06	29.41	Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 ...	[more]
P74221	4.1e-05	31.63	Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]
O22160	5.9e-04	36.78	Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Cp4.1LG09g00290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541447.1	2.77e-167	100.00	thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pe...	[more]
KAG6574243.1	1.72e-161	97.47	Thylakoid lumenal 17.4 kDa protein, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_022968163.1	2.45e-161	96.20	thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima]	[more]
XP_022945269.1	4.94e-161	97.05	thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucurbita moschata]	[more]
XP_008455988.1	1.15e-150	90.30	PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo]	[more]

BLAST of Cp4.1LG09g00290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HX78	1.19e-161	96.20	thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=36...	[more]
A0A6J1G0I9	2.39e-161	97.05	thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 ...	[more]
A0A1S3C2V7	5.55e-151	90.30	thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1CH87	1.59e-150	90.30	thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Momordica charantia OX=3673...	[more]
A0A6J1JAQ7	1.35e-149	89.87	thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=36...	[more]

BLAST of Cp4.1LG09g00290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53490.1	3.4e-79	62.92	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G53490.2	7.5e-79	62.76	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G53490.3	2.9e-78	59.84	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12250.2	1.4e-11	30.12	Pentapeptide repeat-containing protein	[more]
AT1G12250.1	1.8e-11	26.69	Pentapeptide repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001646	Pentapeptide repeat	PFAM	PF13599	Pentapeptide_4	coord: 160..218 e-value: 4.2E-9 score: 36.5
None	No IPR available	GENE3D	2.160.20.80		coord: 113..237 e-value: 2.0E-22 score: 80.8
None	No IPR available	PANTHER	PTHR47485:SF1	THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC	coord: 1..237
None	No IPR available	SUPERFAMILY	141571	Pentapeptide repeat-like	coord: 115..219
IPR044195	Pentapeptide repeat containing protein TL17-like	PANTHER	PTHR47485	THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC	coord: 1..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g00290.1	Cp4.1LG09g00290.1	mRNA