Cp4.1LG09g00050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g00050
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	polyadenylate-binding protein-interacting protein 12
Location	Cp4.1LG09: 50087 .. 56425 (+)
RNA-Seq Expression	Cp4.1LG09g00050
Synteny	Cp4.1LG09g00050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTCCTGAGAATGTTGGACCCAAAATCGGTTCTCCAAGTCAAACTTTGGAAAATACCATGGTTTCCTCCGATTCTAATGACCCCAACGATGTTGAGACTCAGAAGCCCAACAGCGATTCTACGGTCCCCATGAATGGAGAACCCGACTTTCATTCCAACGGCAATGATCACGATGTACAGATGAAGGCACAGCTTCAGGAGAGAGCAGCTACCGCTGCTTCCTTTTCACTTCCTTCAGCCAATTTCAAGCCTCAAATGCCTCAGATGCTCAACGGGTTTGAAGCTAATGCCCAGACGCTGATGGTGAAGTCTGCTGCCGGGTATGGGATGAATCAGAGGCCTAACGGAGTGATAAATGGAGCGGATGGAGGAGAAAACTTTAAGAGGGACATGAGCGATCTGGAGGACTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTATCCCTCCTTCGCTTGGTAAAAATTTGTCTGGTTACTTCGGCGCTGGTGGGCTTGGGTATACTAACGACTTTCTATTGCAAGCTAATTCTGTCAACAACGAAGGGCATATGAATCGAAGGGTATGTGGGGATCTTGGATGATTTGAAAGATGTCCAACTGTTATTTATACTATTACTAAACTTTGAATGCCGTGCACCTCGCTTTGATTTCTGTACTACAAAAACCCTCAAGACTACATGATGGTTTTGTAGGGTCGGGTGTTGGAGTTTTTGAACATTGAAGTGTTTTTTTTTATTTTGTAGTGCTGTTAACCTGCTAGAAGAGCNAAAACCACAATTTTTATCCACAGTCAATATTTAAATTTTCAAATCAAATCTCGTTTTTCTCAAAACAATAATATTTTTATATATATATTTTTTTTGTCCAATATTACACATTGAAAGAATAATTGAATTTCATTCATAAAATAATAATAGTTGAATTTCTTAGCGACAGACAAGCTTCCCTTTGTAAAAAAAAAACATTAATTTAGGTGTAGATAAAAATGAATATTTTAATTTATAAAAACAAACAAATTTAAATTATATATATTTTAAAACAACATTATATTAATTTTTAATTTATTTATCATTACTTATAATAATAATAATAACAATAGTAATACATGATGTTGTAAAATATTAATTTGACAGAAATGGAAAATTAAAAGATTTATAACCATTGTGAAAACAGTTTTTATAATCGAAGAGAGATATATTATACACAAAAGTGTTGAATTTAAGGTAATATATGAATAAAAGGAAATGATGATGAAAAATGGTAAAAACAAAATGTGGGCGTGGGTGGTGAATGGCATTTGCATTTATAAGAGGAAAAATTAAATGTGATAAAGATATAATGATTGGTTTGCATATAAAGAAATAAGGAAATAAAGAAATAAAGAAATAAAGAAATAAAGAAATAAAGAAATGCAGAAAGAAATGCATGATGCATGGTGATGGTTCATTCATGCATGGGTGATGGGAAAGGGCATGGATATGGGCATTTTAGGAATTTTGAAAAGTTTGGTTGGGTGTCCCTGAAATATGTTGAGGGCGAGGGGAAAAGGGGAGGGGAAGAGGAAGACGGAATTTCATCTCATCGGTCATTTCTGGGATGCTGTGCCACTCTCATCTCCACCGCAATCCGACGATCTGATTCTGAGCAGCCCACGTACACACACCCCCCTTCCTTCTCTCTTTCTTCTACGCCTCTCTGTCTGTTTACCAAGCATCGCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCACCCTAACAACCCATTAACATTCTCTCTTGTTTTTTTCATAGCAACAACACCACCCTTACCTTTTCTTAATTCGCGCACAGGGGTTTTCCTTTTCTGTTCGATCCTCTTCAATTCTGCTTCTTCTCCCTCACTTCGATCTCCTGCTGCCTTCACTCCTTTACCAATGGAAATGTGTTAGATACATAACCCCTGCCCTCCCCTCAGGTAACACCCATCCCCCACTTCTTTCCCCGCTTTTTCGTTTTTCTCCTTTCTGATCATACGATTCAATTGATTTTCAGAATAACACTGCAAAACAACCACCTTTTCACCACTACTCTTTCTCTTATCATGGCGGTTCCTGAGAATGTTGGACCCAAAATCGGTTCTCCAAGTCAAACTTTGGAAAATACCATGGTTTCCTCCGATTCTAATGACCCCAACGATGTTGAGACTCAGAAGCCCAACAGCGATTCTACGGTCCCCATGAATGGAGAACCCGACTTTCATTCCAACGGCAATGATCACGATGTACAGATGAAGGCACAGCTTCAGGAGAGAGCAGCTACCGCTGCTTCCTTTTCACTTCCTTCAGCCAATTTCAAGCCTCAAATGCCTCAGATGCTCAACGGGTTTGAAGCTAATGCCCAGACGCTGATGGTGAAGTCTGCTGCCGGGTATGGGATGAATCAGAGGCCTAACGGAGTGATAAATGGAGCGGATGGAGGAGAAAACTTTAAGAGGGACATGAGCGATCTGGAGGACTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTATCCCTCCTTCGCTTGGTAAAAATTTGTCTGGTTACTTCGGCGCTGGTGGGCTTGGGTATACTAACGACTTTCTATTGCAAGCTAATTCTGTCAACAACGAAGGGCATATGAATCGAAGGGTATGTGGGGATCTTGGATGATTTGAAAGATGTCCAACTGTTATTTATACTATTACTAAACTTTGAATGCCGTGCACCTCGCTTTGATTTCTGTACTACAAAAACCCTCAAGACTACATGATGGTTTTGTAGGGTCGGGTGTTGGAGTTTTTGAACATTGAAGTGTTTTTTTTTATTTTGTAGTGCTGTTAACCTGCTAGAAGAGCAGCTTGATTATGTATTATTTGATTGCACATTTTAGCACCAATAGATTTTAGAGAAATCTATTTTGTGTTGAATGAATCTACTATTGATTTGGTTTCTCTTGTTTGTTTCCTTTATTCTTTTCGCTTAGAAGAAGAATGGTTTTAGCCAAGGGAGAAGGAGGATGAATAATAAGATGAATGCGGTGAAGAGGGATGAGATGACCCGGAGGACGGTGTATGTATCAGACATCGATCAGCAGGTAAGAGACCTCCATTTCCAAAACTTCCTTGATTATATGCCTTGCACTTCTCCTTTTTGACCAATCCATTTTTGGATCATGGAATTGCATTGTAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTGGCTGTGGAGAGGTAGCGGGTTATTCTCTTTCCTTTCATTTGATCTGTTTTTTTTTTTTTGTTTTTTTTTTTGGCATTTTACTGCTAGCTTAATGTGATGTATCTTCAATAGGTTGTTGACTGTCGTATCTGCGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACGGATGAAGGTACAGTCCCAAACTCAGTATATTTAGATGTATTTCCGACTATATCATATCTAATTTGCTTCATGCTAGCAGAGGGTGCAAGAGCTTCCTTGAGTCTTTCAGGGACAGTTCTTGGTTTCTATCCAGTTAGAGTGCTGCCCTCAAAAACTGCCATAGCACCTGTCAATCCTGACTTTTTACCCAGGGTAATTAACCGTCTTCAATGTCACTCCTTCATTTTTTTTTATCCATTCTAATTTGTTCCTAGCAATGCTATCAACTCATTTTAATTTATTGTACTTCTTTTCTTGAAACTGATTTTGTTTTATTGTTTCTAGTCGGATGATGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTAGGTTTGCAAGTGAAAAACTTTCTGAATGAATTTGAGAACTGTGTTTTTGGAAGAGGAGAGAATGAAAGAACTTAAATATGCTCGATTGTTATATTGATTGTTTTCATGGTATGTGATGTCATGTAGGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTCTGTTCTTCGTTTAACAGATGTCTTATTTCTTCGGAATTTTATTTGATTCTCTTTACAGCGCTTTTATGTTTTCTGGTTGTGGCTTAATCTATGTAATCTGTTAACCTCGTGTAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCCACTCGTATAGCTTTTGTTGAGTTTACCATGGTAATCTTGTTCACTTCCGTTGATTTTATTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACACTTTTTTCTTCTTTTCCTTTTGCGGGGGTGGGGGTTGGAGATTGAGCATTAGAGGAGTGATGAGGATGGACATGGTTTGCCTTTTCAACTATTAGAGGGGTGGTGAGGATGAATTTGGTTTGCTACTTCCTAACCCTGAAGAAACTCACGCCAAAACGGGGACGATGGCAAGCAAGACAAACTTGCCTAGTTTGACTGACTTAATTAATGAACAGCCATCAATTCAAATTCTGGATTTCTGAACCGAGAGAGATCAAGAATTCTCACTATTTCTTAGATTCATGGACCCAATTCAATTCAGTGGGATCTTTCCTTCACATTTTTTTGATCAAGAACAATTATCAACTAAATCTGATGTGTGGTTCTTGCATTTACCATCTATCAATGCATCTTTGCTTTTATGGGGTACAGAATGCATTTAGAGCACCTTTGTCGAACCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAATGCATTTAGAGTACTGCTTTACTTGTTATATCTATATGTAAACTTAATAATGGATGTGGTTTGCCTTATCAACAAGTCTGTTGTGATTCTTGAAGTTATCATTCACCAATACATCGTTGGTTTTGTGGCATATAGAATGGAGAGCACTTGAGTGATGGCTTTAAGATGCTGCATTCACATCTGTCGAGCAATTTCAAATATCTTTGTAATGCATATATCATCTATTAAATCGTCAAAGATTGATTGTTTTTCATTTGAGTGATTATTGTTTTTCATGTTTGTGAATAACAAAGCATTAGCTATGCCCTAAAAGACTTTCTAGAGAACATGGGTGTTTACCCATGCAGTTACATGAATGAAGTCGTGTTTGGCTGTAACTTCACCATGACTTTGCGTAACTGTATTGCATTTATTTTTAATTTGCAGGCTGAGAGTGCAATTGCTGCACTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGTTAGTATAGCTTGTTCTTGTTTCCTTTTCTGGTATTGGGTATTTTGAGAAACGTGTTGTGTTTTTGTTTGAAGAAGTAAAACCGTTTTGATTCTTATGGGTTTTGTTTTCAGGGTAAGCCCATCAAAGACCCCAGTTCGCCCTCGCTCTCCTCGTGCCCAGCTGAACTGATGCTCCCCTGCTTCTATCCCATGTGGGCCTAGTGCCCAATAGATATATTTATATATATTGCATATATATATTATGGTTATAGAGATATGTCCAAAGGGGTTGTGGGGTTTGGTGGTGCATGATCCTCTGCAGTGGAGTTGAGTTGGTACCTTTTGGTGTACCTAGAACTAGGTGTTGTTGGTGAATGAGATATTTGTTTAGTTTTTTTTTTTTTTTTTTAATATTTTTTTTTTATAGAGTGGATGGCATTTTGAGGCTCGTAGTCGTTTATCTGTGACGATGTTATGATGGATGGACTGATGGATTCTGTAGGGTTGGTCCCTGGGAACACTTGGAACTTGCTTTCAATGTTTCTAACTGGAAACTCTCTCTTAATCAACCTCGCTTTAGTCATTTGTTTTTGATCATCTACATTCTTTTTTCTGGATGCTGTGTGTTTGTGTTTTTTCATTATCATTCTGCTGCTACATAGTTAGCACATAGAGA

mRNA sequence

ATGGCGGTTCCTGAGAATGTTGGACCCAAAATCGGTTCTCCAAGTCAAACTTTGGAAAATACCATGGTTTCCTCCGATTCTAATGACCCCAACGATGTTGAGACTCAGAAGCCCAACAGCGATTCTACGGTCCCCATGAATGGAGAACCCGACTTTCATTCCAACGGCAATGATCACGATGTACAGATGAAGGCACAGCTTCAGGAGAGAGCAGCTACCGCTGCTTCCTTTTCACTTCCTTCAGCCAATTTCAAGCCTCAAATGCCTCAGATGCTCAACGGGTTTGAAGCTAATGCCCAGACGCTGATGGTGAAGTCTGCTGCCGGGTATGGGATGAATCAGAGGCCTAACGGAGTGATAAATGGAGCGGATGGAGGAGAAAACTTTAAGAGGGACATGAGCGATCTGGAGGACTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTATCCCTCCTTCGCTTGGTAAAAATTTGTCTGGTTACTTCGGCGCTGGTGGGCTTGGGTATACTAACGACTTTCTATTGCAAGCTAATTCTGTCAACAACGAAGGGCATATGAATCGAAGGATACATAACCCCTGCCCTCCCCTCAGAATAACACTGCAAAACAACCACCTTTTCACCACTACTCTTTCTCTTATCATGGCGGTTCCTGAGAATGTTGGACCCAAAATCGGTTCTCCAAGTCAAACTTTGGAAAATACCATGGTTTCCTCCGATTCTAATGACCCCAACGATGTTGAGACTCAGAAGCCCAACAGCGATTCTACGGTCCCCATGAATGGAGAACCCGACTTTCATTCCAACGGCAATGATCACGATGTACAGATGAAGGCACAGCTTCAGGAGAGAGCAGCTACCGCTGCTTCCTTTTCACTTCCTTCAGCCAATTTCAAGCCTCAAATGCCTCAGATGCTCAACGGGTTTGAAGCTAATGCCCAGACGCTGATGGTGAAGTCTGCTGCCGGGTATGGGATGAATCAGAGGCCTAACGGAGTGATAAATGGAGCGGATGGAGGAGAAAACTTTAAGAGGGACATGAGCGATCTGGAGGACTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTATCCCTCCTTCGCTTGGTAAAAATTTGTCTGGTTACTTCGGCGCTGGTGGGCTTGGGTATACTAACGACTTTCTATTGCAAGCTAATTCTGTCAACAACGAAGGGCATATGAATCGAAGGAAGAAGAATGGTTTTAGCCAAGGGAGAAGGAGGATGAATAATAAGATGAATGCGGTGAAGAGGGATGAGATGACCCGGAGGACGGTGTATGTATCAGACATCGATCAGCAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTGGCTGTGGAGAGGTTGTTGACTGTCGTATCTGCGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACGGATGAAGAGGGTGCAAGAGCTTCCTTGAGTCTTTCAGGGACAGTTCTTGGTTTCTATCCAGTTAGAGTGCTGCCCTCAAAAACTGCCATAGCACCTGTCAATCCTGACTTTTTACCCAGGTCGGATGATGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCCACTCGTATAGCTTTTGTTGAGTTTACCATGGCTGAGAGTGCAATTGCTGCACTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGGTAAGCCCATCAAAGACCCCAGTTCGCCCTCGCTCTCCTCGTGCCCAGCTGAACTGATGCTCCCCTGCTTCTATCCCATGTGGGCCTAGTGCCCAATAGATATATTTATATATATTGCATATATATATTATGGTTATAGAGATATGTCCAAAGGGGTTGTGGGGTTTGGTGGTGCATGATCCTCTGCAGTGGAGTTGAGTTGGTACCTTTTGGTGTACCTAGAACTAGGTGTTGTTGGTGAATGAGATATTTGTTTAGTTTTTTTTTAGAGTGGATGGCATTTTGAGGCTCGTAGTCGTTTATCTGTGACGATGTTATGATGGATGGACTGATGGATTCTGTAGGGTTGGTCCCTGGGAACACTTGGAACTTGCTTTCAATGTTTCTAACTGGAAACTCTCTCTTAATCAACCTCGCTTTAGTCATTTGTTTTTGATCATCTACATTCTTTTTTCTGGATGCTGTGTGTTTGTGTTTTTTCATTATCATTCTGCTGCTACATAGTTAGCACATAGAGA

Coding sequence (CDS)

ATGGCGGTTCCTGAGAATGTTGGACCCAAAATCGGTTCTCCAAGTCAAACTTTGGAAAATACCATGGTTTCCTCCGATTCTAATGACCCCAACGATGTTGAGACTCAGAAGCCCAACAGCGATTCTACGGTCCCCATGAATGGAGAACCCGACTTTCATTCCAACGGCAATGATCACGATGTACAGATGAAGGCACAGCTTCAGGAGAGAGCAGCTACCGCTGCTTCCTTTTCACTTCCTTCAGCCAATTTCAAGCCTCAAATGCCTCAGATGCTCAACGGGTTTGAAGCTAATGCCCAGACGCTGATGGTGAAGTCTGCTGCCGGGTATGGGATGAATCAGAGGCCTAACGGAGTGATAAATGGAGCGGATGGAGGAGAAAACTTTAAGAGGGACATGAGCGATCTGGAGGACTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTATCCCTCCTTCGCTTGGTAAAAATTTGTCTGGTTACTTCGGCGCTGGTGGGCTTGGGTATACTAACGACTTTCTATTGCAAGCTAATTCTGTCAACAACGAAGGGCATATGAATCGAAGGATACATAACCCCTGCCCTCCCCTCAGAATAACACTGCAAAACAACCACCTTTTCACCACTACTCTTTCTCTTATCATGGCGGTTCCTGAGAATGTTGGACCCAAAATCGGTTCTCCAAGTCAAACTTTGGAAAATACCATGGTTTCCTCCGATTCTAATGACCCCAACGATGTTGAGACTCAGAAGCCCAACAGCGATTCTACGGTCCCCATGAATGGAGAACCCGACTTTCATTCCAACGGCAATGATCACGATGTACAGATGAAGGCACAGCTTCAGGAGAGAGCAGCTACCGCTGCTTCCTTTTCACTTCCTTCAGCCAATTTCAAGCCTCAAATGCCTCAGATGCTCAACGGGTTTGAAGCTAATGCCCAGACGCTGATGGTGAAGTCTGCTGCCGGGTATGGGATGAATCAGAGGCCTAACGGAGTGATAAATGGAGCGGATGGAGGAGAAAACTTTAAGAGGGACATGAGCGATCTGGAGGACTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTATCCCTCCTTCGCTTGGTAAAAATTTGTCTGGTTACTTCGGCGCTGGTGGGCTTGGGTATACTAACGACTTTCTATTGCAAGCTAATTCTGTCAACAACGAAGGGCATATGAATCGAAGGAAGAAGAATGGTTTTAGCCAAGGGAGAAGGAGGATGAATAATAAGATGAATGCGGTGAAGAGGGATGAGATGACCCGGAGGACGGTGTATGTATCAGACATCGATCAGCAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTGGCTGTGGAGAGGTTGTTGACTGTCGTATCTGCGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACGGATGAAGAGGGTGCAAGAGCTTCCTTGAGTCTTTCAGGGACAGTTCTTGGTTTCTATCCAGTTAGAGTGCTGCCCTCAAAAACTGCCATAGCACCTGTCAATCCTGACTTTTTACCCAGGTCGGATGATGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCCACTCGTATAGCTTTTGTTGAGTTTACCATGGCTGAGAGTGCAATTGCTGCACTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGGTAAGCCCATCAAAGACCCCAGTTCGCCCTCGCTCTCCTCGTGCCCAGCTGAACTGA

Protein sequence

MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHDVQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVINGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANSVNNEGHMNRRIHNPCPPLRITLQNNHLFTTTLSLIMAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHDVQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVINGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN

Homology

[Close]

BLAST of Cp4.1LG09g00050 vs. ExPASy Swiss-Prot
Match: Q9LPI5 (Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana OX=3702 GN=CID11 PE=2 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.0e-108
Identity = 201/284 (70.77%), Postives = 231/284 (81.34%), Query Frame = 0


Query: 336 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKN-----LSGYF-GAGGLGYTNDF 395
           +G DGGE+FKRDM +L++L SKLNPMAEEF+PPSL K        G+F  AG     N F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 396 LLQANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLA 455
               N      +   R+K  F QG+RRMN + +  +R+++ RRTVYVSD+DQQVTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 456 TVFAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAI 515
            +F  CG+VVDCRICGDPNS+L FAFIEFTDEEGA  +L+LSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 516 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHST 575
           APVNP FLPR++DEREMC+RTIYCTNIDKKVTQ++VK+FFES CGEV RLRLLGDY HST
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHST 310

Query: 576 RIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 614
           RIAFVEF MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR
Sbjct: 311 RIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 354

[Close]

BLAST of Cp4.1LG09g00050 vs. ExPASy Swiss-Prot
Match: Q9S7N9 (Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana OX=3702 GN=CID12 PE=1 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.5e-107
Identity = 205/318 (64.47%), Postives = 244/318 (76.73%), Query Frame = 0


Query: 301 PQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVINGADGGENFKRDMSDLEDLLSKLNP 360
           P  P  +   E+ A +       G G++      +  +DGGE+FKRDM +L +LLSKLNP
Sbjct: 21  PSPPSSVTSQESGASS--NNDHGGNGIHDEIGVHVARSDGGESFKRDMRELHELLSKLNP 80

Query: 361 MAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANSVNNEGHMNRRKKNGFSQGRRRMNNK 420
           MA+EFIPPSL K +   F  G     N F+   N   NE    RRKK+   QG+RRMN +
Sbjct: 81  MAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNEDGSFRRKKSFGQQGKRRMNPR 140

Query: 421 MNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGCGEVVDCRICGDPNSILHFAFIEFTD 480
            +  +R+E+ RRTVYVSDIDQQVTEE LA +F G G+VVDCRICGDPNS+L FAFIEFTD
Sbjct: 141 TSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTD 200

Query: 481 EEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKV 540
           E GAR +L+LSGT+LGFYPV+V+PSKTAIAPVNP FLPR++DEREMC+RTIYCTNIDKK+
Sbjct: 201 EVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKL 260

Query: 541 TQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRV 600
           TQ ++KLFFES+CGEV RLRLLGDYHH TRI FVEF MAESAIAALNCSGV+LGSLPIRV
Sbjct: 261 TQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCSGVLLGSLPIRV 320

Query: 601 SPSKTPVRPRS-PRAQLN 618
           SPSKTPVR R+ PR Q++
Sbjct: 321 SPSKTPVRSRAIPRHQMH 336

[Close]

BLAST of Cp4.1LG09g00050 vs. ExPASy Swiss-Prot
Match: Q9SG10 (Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana OX=3702 GN=CID10 PE=2 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 3.1e-105
Identity = 217/404 (53.71%), Postives = 267/404 (66.09%), Query Frame = 0


Query: 216 MAVPENVGPKIGSPSQTLENTMVSSDSND----PNDVETQKPNSDSTVPMNGEPDFHSNG 275
           MAV EN G K+ S  Q L+N   ++ + +    P   + Q P SDS+ P+          
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLT--------- 60

Query: 276 NDHDVQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRP 335
               +    +  +R            N   Q  Q LNGF  N               +R 
Sbjct: 61  ----IDSTPETDDR-----------INETAQKVQTLNGFSGN--------------GERD 120

Query: 336 NGVINGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLL 395
           N   NG         ++ DL D  SKLNPMA+EF+PPSL ++ SG     GLG+TN+F  
Sbjct: 121 N---NG---------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVL-RNGLGFTNNFAA 180

Query: 396 QANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATV 455
                +   H  RR+++ F QG+RRMN + +  ++D++ RRTVYVSDIDQQVTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 456 FAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAP 515
           F  CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+LS+SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 516 VNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 575
           VNP FLPRS+DEREMC RT+YCTNIDK++TQ ++K FFE LCGEV RLR LGDYHH TRI
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRI 351

Query: 576 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 616
           AFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 361 AFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of Cp4.1LG09g00050 vs. ExPASy Swiss-Prot
Match: Q9LRR6 (Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana OX=3702 GN=CID9 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.5e-86
Identity = 168/274 (61.31%), Postives = 204/274 (74.45%), Query Frame = 0


Query: 347 DMSDLEDLLSKLNPMAEEFIPPSLG-KNLSGYFGAGGLGYTNDFLLQANSVNNEGHM--- 406
           DM  L  +  KLNP+A+EF P     K  +    A      +DF         E  +   
Sbjct: 49  DMHKLVAMFKKLNPLAKEFFPSYYDPKKNNQVAKANQFLPADDFETTKKQSGEEFDLDAK 108

Query: 407 ---NRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGCGEVV 466
              N RK+  +SQGRRR+  +++  +R++  RRTVYVSDIDQ VTEE LA +F+ CG+VV
Sbjct: 109 KDDNTRKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCGQVV 168

Query: 467 DCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPDFLPR 526
           DCRICGDP+S+L FAF+EF D++GA  +LSL GT+LGFYPVRVLPSKTAI PVNP FLPR
Sbjct: 169 DCRICGDPHSVLRFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILPVNPTFLPR 228

Query: 527 SDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMA 586
           S+DEREMC+RTIYCTNIDKKV+QA+V+ FFES CGEV RLRLLGD  HSTRIAFVEF +A
Sbjct: 229 SEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALA 288

Query: 587 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 614
           +SA++ALNCSG+V+GS PIRVSPSKTPVRPR  R
Sbjct: 289 DSALSALNCSGMVVGSQPIRVSPSKTPVRPRITR 322

[Close]

BLAST of Cp4.1LG09g00050 vs. ExPASy Swiss-Prot
Match: Q9C8M0 (Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana OX=3702 GN=CID8 PE=1 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.9e-86
Identity = 166/271 (61.25%), Postives = 208/271 (76.75%), Query Frame = 0


Query: 348 MSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLL---QANSVNNEGHMNR 407
           M  L  +  KLNP A+EF  PS  +N +          ++DF++    +   N +  +NR
Sbjct: 50  MKKLVAMFKKLNPEAKEFF-PSYKRNTN---------QSDDFVIAIKPSGEDNKKVAINR 109

Query: 408 RKKNGFSQGRR-RMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGCGEVVDCRI 467
           R++N ++QGRR R+  + +  +R++  RRTVYVSDIDQ VTEE LA +F+ CG+VVDCRI
Sbjct: 110 RRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRI 169

Query: 468 CGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDE 527
           CGDPNS+L FAF+EF+D++GAR++LSL GT++G+YPVRVLPSKTAI PVNP FLPRS+DE
Sbjct: 170 CGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDE 229

Query: 528 REMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAI 587
           REMCSRTIYCTN+DK  T+ +V  FF+S CGEV RLRLLGD  HSTRIAFVEF MAESA+
Sbjct: 230 REMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAV 289

Query: 588 AALNCSGVVLGSLPIRVSPSKTPVRPRSPRA 615
           AALNCSG+VLGS PIRVSPSKTPVR R  R+
Sbjct: 290 AALNCSGIVLGSQPIRVSPSKTPVRSRITRS 310

[Close]

BLAST of Cp4.1LG09g00050 vs. NCBI nr
Match: XP_023542023.1 (polyadenylate-binding protein-interacting protein 10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1185 bits (3065), Expect = 0.0
Identity = 611/635 (96.22%), Postives = 612/635 (96.38%), Query Frame = 0


Query: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 60
           MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 60

Query: 61  VQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVI 120
           VQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180
           NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 181 VNNEGHMNRRIHNPCPPL------------------RITLQNNHLFTTTLSLIMAVPENV 240
           VNNEGHMNRR+  P P                    RITLQNNHLFTTTLSLIMAVPENV
Sbjct: 181 VNNEGHMNRRV-TPIPHFFPRFFVFLLSDHTIQLIFRITLQNNHLFTTTLSLIMAVPENV 240

Query: 241 GPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHDVQMKAQL 300
           GPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHDVQMKAQL
Sbjct: 241 GPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHDVQMKAQL 300

Query: 301 QERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVINGADGGE 360
           QERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVINGADGGE
Sbjct: 301 QERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVINGADGGE 360

Query: 361 NFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANSVNNEGHM 420
           NFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANSVNNEGHM
Sbjct: 361 NFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANSVNNEGHM 420

Query: 421 NRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGCGEVVDCR 480
           NRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGCGEVVDCR
Sbjct: 421 NRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGCGEVVDCR 480

Query: 481 ICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDD 540
           ICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDD
Sbjct: 481 ICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDD 540

Query: 541 EREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESA 600
           EREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESA
Sbjct: 541 EREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESA 600

Query: 601 IAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 617
           IAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 601 IAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 634

[Close]

BLAST of Cp4.1LG09g00050 vs. NCBI nr
Match: KAG6574264.1 (Polyadenylate-binding protein-interacting protein 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 834 bits (2154), Expect = 1.88e-300
Identity = 423/427 (99.06%), Postives = 423/427 (99.06%), Query Frame = 0


Query: 191 IHNPCPPLRITLQNNHLFTTTLSLIMAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVET 250
           IHNPCPPLRITLQNN LFT TLSLIMAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVET
Sbjct: 57  IHNPCPPLRITLQNNRLFTPTLSLIMAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVET 116

Query: 251 QKPNSDSTVPMNGEPDFHSNGNDHDVQMKAQLQERAATAASFSLPSANFKPQMPQMLNGF 310
           QKPNSDSTVPMNGEPDFHSNGNDHDVQMKAQLQERAATAASFSLPSANFKPQMPQM NGF
Sbjct: 117 QKPNSDSTVPMNGEPDFHSNGNDHDVQMKAQLQERAATAASFSLPSANFKPQMPQMPNGF 176

Query: 311 EANAQTLMVKSAAGYGMNQRPNGVINGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSL 370
           EANAQTLMVKSAAGYGMNQRPNGVINGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSL
Sbjct: 177 EANAQTLMVKSAAGYGMNQRPNGVINGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSL 236

Query: 371 GKNLSGYFGAGGLGYTNDFLLQANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMT 430
            KNLSGYFGAGGLGYTNDFLLQANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMT
Sbjct: 237 AKNLSGYFGAGGLGYTNDFLLQANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMT 296

Query: 431 RRTVYVSDIDQQVTEELLATVFAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSL 490
           RRTVYVSDIDQQVTEELLATVFAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSL
Sbjct: 297 RRTVYVSDIDQQVTEELLATVFAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSL 356

Query: 491 SGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFE 550
           SGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFE
Sbjct: 357 SGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFE 416

Query: 551 SLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPR 610
           SLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPR
Sbjct: 417 SLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPR 476

Query: 611 SPRAQLN 617
           SPRAQLN
Sbjct: 477 SPRAQLN 483

[Close]

BLAST of Cp4.1LG09g00050 vs. NCBI nr
Match: XP_022945958.1 (polyadenylate-binding protein-interacting protein 12-like isoform X1 [Cucurbita moschata] >XP_022945959.1 polyadenylate-binding protein-interacting protein 12-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 786 bits (2029), Expect = 9.28e-283
Identity = 399/402 (99.25%), Postives = 399/402 (99.25%), Query Frame = 0


Query: 216 MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 275
           MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 60

Query: 276 VQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVI 335
           VQMKAQLQERAATAASFSLPS NFKPQMPQM NGFEANAQTLMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQMKAQLQERAATAASFSLPSVNFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 336 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 395
           NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSL KNLSGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLAKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 396 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 455
           VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC
Sbjct: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 456 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 515
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 516 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 575
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 576 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 617
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Cp4.1LG09g00050 vs. NCBI nr
Match: XP_022968474.1 (polyadenylate-binding protein-interacting protein 12-like isoform X1 [Cucurbita maxima] >XP_022968475.1 polyadenylate-binding protein-interacting protein 12-like isoform X1 [Cucurbita maxima] >XP_022968476.1 polyadenylate-binding protein-interacting protein 12-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 782 bits (2019), Expect = 3.09e-281
Identity = 397/402 (98.76%), Postives = 399/402 (99.25%), Query Frame = 0


Query: 216 MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 275
           MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNG+DHD
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60

Query: 276 VQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVI 335
           VQ KAQL+ER ATAASFSLPSANFKPQMPQM NGFEANAQTLMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 336 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 395
           NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 396 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 455
           VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC
Sbjct: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 456 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 515
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 516 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 575
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 576 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 617
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Cp4.1LG09g00050 vs. NCBI nr
Match: XP_022945960.1 (polyadenylate-binding protein-interacting protein 12-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 780 bits (2013), Expect = 2.43e-280
Identity = 398/402 (99.00%), Postives = 398/402 (99.00%), Query Frame = 0


Query: 216 MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 275
           MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 60

Query: 276 VQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVI 335
           VQMKAQLQERAATAASFSLPS NFKPQMPQM NGFEANAQTLMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQMKAQLQERAATAASFSLPSVNFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 336 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 395
           NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSL KNLSGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLAKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 396 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 455
           VNNEGHMNRRK NGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC
Sbjct: 181 VNNEGHMNRRK-NGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 456 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 515
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 516 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 575
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 576 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 617
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 401

[Close]

BLAST of Cp4.1LG09g00050 vs. ExPASy TrEMBL
Match: A0A6J1G2E6 (polyadenylate-binding protein-interacting protein 12-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450047 PE=4 SV=1)

HSP 1 Score: 786 bits (2029), Expect = 4.49e-283
Identity = 399/402 (99.25%), Postives = 399/402 (99.25%), Query Frame = 0


Query: 216 MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 275
           MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 60

Query: 276 VQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVI 335
           VQMKAQLQERAATAASFSLPS NFKPQMPQM NGFEANAQTLMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQMKAQLQERAATAASFSLPSVNFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 336 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 395
           NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSL KNLSGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLAKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 396 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 455
           VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC
Sbjct: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 456 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 515
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 516 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 575
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 576 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 617
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Cp4.1LG09g00050 vs. ExPASy TrEMBL
Match: A0A6J1HZR5 (polyadenylate-binding protein-interacting protein 12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467705 PE=4 SV=1)

HSP 1 Score: 782 bits (2019), Expect = 1.49e-281
Identity = 397/402 (98.76%), Postives = 399/402 (99.25%), Query Frame = 0


Query: 216 MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 275
           MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNG+DHD
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60

Query: 276 VQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVI 335
           VQ KAQL+ER ATAASFSLPSANFKPQMPQM NGFEANAQTLMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 336 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 395
           NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 396 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 455
           VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC
Sbjct: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 456 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 515
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 516 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 575
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 576 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 617
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Cp4.1LG09g00050 vs. ExPASy TrEMBL
Match: A0A6J1G2G9 (polyadenylate-binding protein-interacting protein 12-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450047 PE=4 SV=1)

HSP 1 Score: 780 bits (2013), Expect = 1.18e-280
Identity = 398/402 (99.00%), Postives = 398/402 (99.00%), Query Frame = 0


Query: 216 MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 275
           MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 60

Query: 276 VQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVI 335
           VQMKAQLQERAATAASFSLPS NFKPQMPQM NGFEANAQTLMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQMKAQLQERAATAASFSLPSVNFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 336 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 395
           NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSL KNLSGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLAKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 396 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 455
           VNNEGHMNRRK NGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC
Sbjct: 181 VNNEGHMNRRK-NGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 456 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 515
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 516 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 575
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 576 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 617
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 401

[Close]

BLAST of Cp4.1LG09g00050 vs. ExPASy TrEMBL
Match: A0A6J1HTL6 (polyadenylate-binding protein-interacting protein 12-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467705 PE=4 SV=1)

HSP 1 Score: 776 bits (2003), Expect = 3.91e-279
Identity = 396/402 (98.51%), Postives = 398/402 (99.00%), Query Frame = 0


Query: 216 MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 275
           MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNG+DHD
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60

Query: 276 VQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVI 335
           VQ KAQL+ER ATAASFSLPSANFKPQMPQM NGFEANAQTLMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 336 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 395
           NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 396 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 455
           VNNEGHMNRRK NGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC
Sbjct: 181 VNNEGHMNRRK-NGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 456 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 515
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 516 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 575
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 576 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 617
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 401

[Close]

BLAST of Cp4.1LG09g00050 vs. ExPASy TrEMBL
Match: A0A6J1JC04 (polyadenylate-binding protein-interacting protein 12 OS=Cucurbita maxima OX=3661 GN=LOC111483053 PE=4 SV=1)

HSP 1 Score: 706 bits (1823), Expect = 9.68e-252
Identity = 359/402 (89.30%), Postives = 372/402 (92.54%), Query Frame = 0


Query: 216 MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 275
           MAV ENVGPKIGSPSQ+ ENTM+SSDSNDP DVE QKP +DS V +N EPDFH NG D +
Sbjct: 1   MAVAENVGPKIGSPSQSFENTMLSSDSNDPKDVENQKPKNDSAVSINAEPDFHPNGIDQN 60

Query: 276 VQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVI 335
            Q KA LQERAA AASF+LPS NFK QM QM NGFE NAQ+LMVKSA GYGMNQRPNGVI
Sbjct: 61  TQKKAHLQERAAAAASFALPSPNFKSQMGQMQNGFETNAQSLMVKSAGGYGMNQRPNGVI 120

Query: 336 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 395
           NGADGGENFKRDM DLEDLLSKLNPMAEEF+PPSL KN SGYFG   LGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180

Query: 396 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 455
           +NNEG+ NRRKKNGFSQGRR+ NNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFA C
Sbjct: 181 LNNEGNNNRRKKNGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240

Query: 456 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 515
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASL+LSGTVLGFYPVRVLPSKTAIAPVNP+
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300

Query: 516 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 575
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 576 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 617
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Cp4.1LG09g00050 vs. TAIR 10
Match: AT1G32790.1 (CTC-interacting domain 11 )

HSP 1 Score: 395.6 bits (1015), Expect = 7.4e-110
Identity = 201/284 (70.77%), Postives = 231/284 (81.34%), Query Frame = 0


Query: 336 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKN-----LSGYF-GAGGLGYTNDF 395
           +G DGGE+FKRDM +L++L SKLNPMAEEF+PPSL K        G+F  AG     N F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 396 LLQANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLA 455
               N      +   R+K  F QG+RRMN + +  +R+++ RRTVYVSD+DQQVTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 456 TVFAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAI 515
            +F  CG+VVDCRICGDPNS+L FAFIEFTDEEGA  +L+LSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 516 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHST 575
           APVNP FLPR++DEREMC+RTIYCTNIDKKVTQ++VK+FFES CGEV RLRLLGDY HST
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHST 310

Query: 576 RIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 614
           RIAFVEF MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR
Sbjct: 311 RIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 354

[Close]

BLAST of Cp4.1LG09g00050 vs. TAIR 10
Match: AT4G10610.1 (CTC-interacting domain 12 )

HSP 1 Score: 391.7 bits (1005), Expect = 1.1e-108
Identity = 205/318 (64.47%), Postives = 244/318 (76.73%), Query Frame = 0


Query: 301 PQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVINGADGGENFKRDMSDLEDLLSKLNP 360
           P  P  +   E+ A +       G G++      +  +DGGE+FKRDM +L +LLSKLNP
Sbjct: 21  PSPPSSVTSQESGASS--NNDHGGNGIHDEIGVHVARSDGGESFKRDMRELHELLSKLNP 80

Query: 361 MAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANSVNNEGHMNRRKKNGFSQGRRRMNNK 420
           MA+EFIPPSL K +   F  G     N F+   N   NE    RRKK+   QG+RRMN +
Sbjct: 81  MAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNEDGSFRRKKSFGQQGKRRMNPR 140

Query: 421 MNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGCGEVVDCRICGDPNSILHFAFIEFTD 480
            +  +R+E+ RRTVYVSDIDQQVTEE LA +F G G+VVDCRICGDPNS+L FAFIEFTD
Sbjct: 141 TSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTD 200

Query: 481 EEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKV 540
           E GAR +L+LSGT+LGFYPV+V+PSKTAIAPVNP FLPR++DEREMC+RTIYCTNIDKK+
Sbjct: 201 EVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKL 260

Query: 541 TQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRV 600
           TQ ++KLFFES+CGEV RLRLLGDYHH TRI FVEF MAESAIAALNCSGV+LGSLPIRV
Sbjct: 261 TQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCSGVLLGSLPIRV 320

Query: 601 SPSKTPVRPRS-PRAQLN 618
           SPSKTPVR R+ PR Q++
Sbjct: 321 SPSKTPVRSRAIPRHQMH 336

[Close]

BLAST of Cp4.1LG09g00050 vs. TAIR 10
Match: AT3G49390.1 (CTC-interacting domain 10 )

HSP 1 Score: 384.0 bits (985), Expect = 2.2e-106
Identity = 217/404 (53.71%), Postives = 267/404 (66.09%), Query Frame = 0


Query: 216 MAVPENVGPKIGSPSQTLENTMVSSDSND----PNDVETQKPNSDSTVPMNGEPDFHSNG 275
           MAV EN G K+ S  Q L+N   ++ + +    P   + Q P SDS+ P+          
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLT--------- 60

Query: 276 NDHDVQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRP 335
               +    +  +R            N   Q  Q LNGF  N               +R 
Sbjct: 61  ----IDSTPETDDR-----------INETAQKVQTLNGFSGN--------------GERD 120

Query: 336 NGVINGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLL 395
           N   NG         ++ DL D  SKLNPMA+EF+PPSL ++ SG     GLG+TN+F  
Sbjct: 121 N---NG---------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVL-RNGLGFTNNFAA 180

Query: 396 QANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATV 455
                +   H  RR+++ F QG+RRMN + +  ++D++ RRTVYVSDIDQQVTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 456 FAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAP 515
           F  CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+LS+SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 516 VNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 575
           VNP FLPRS+DEREMC RT+YCTNIDK++TQ ++K FFE LCGEV RLR LGDYHH TRI
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRI 351

Query: 576 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 616
           AFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 361 AFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of Cp4.1LG09g00050 vs. TAIR 10
Match: AT3G49390.2 (CTC-interacting domain 10 )

HSP 1 Score: 384.0 bits (985), Expect = 2.2e-106
Identity = 217/404 (53.71%), Postives = 267/404 (66.09%), Query Frame = 0


Query: 216 MAVPENVGPKIGSPSQTLENTMVSSDSND----PNDVETQKPNSDSTVPMNGEPDFHSNG 275
           MAV EN G K+ S  Q L+N   ++ + +    P   + Q P SDS+ P+          
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLT--------- 60

Query: 276 NDHDVQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRP 335
               +    +  +R            N   Q  Q LNGF  N               +R 
Sbjct: 61  ----IDSTPETDDR-----------INETAQKVQTLNGFSGN--------------GERD 120

Query: 336 NGVINGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLL 395
           N   NG         ++ DL D  SKLNPMA+EF+PPSL ++ SG     GLG+TN+F  
Sbjct: 121 N---NG---------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVL-RNGLGFTNNFAA 180

Query: 396 QANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATV 455
                +   H  RR+++ F QG+RRMN + +  ++D++ RRTVYVSDIDQQVTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 456 FAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAP 515
           F  CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+LS+SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 516 VNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 575
           VNP FLPRS+DEREMC RT+YCTNIDK++TQ ++K FFE LCGEV RLR LGDYHH TRI
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRI 351

Query: 576 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 616
           AFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 361 AFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of Cp4.1LG09g00050 vs. TAIR 10
Match: AT4G10610.2 (CTC-interacting domain 12 )

HSP 1 Score: 371.3 bits (952), Expect = 1.5e-102
Identity = 192/299 (64.21%), Postives = 228/299 (76.25%), Query Frame = 0


Query: 301 PQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVINGADGGENFKRDMSDLEDLLSKLNP 360
           P  P  +   E+ A +       G G++      +  +DGGE+FKRDM +L +LLSKLNP
Sbjct: 21  PSPPSSVTSQESGASS--NNDHGGNGIHDEIGVHVARSDGGESFKRDMRELHELLSKLNP 80

Query: 361 MAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANSVNNEGHMNRRKKNGFSQGRRRMNNK 420
           MA+EFIPPSL K +   F  G     N F+   N   NE    RRKK+   QG+RRMN +
Sbjct: 81  MAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNEDGSFRRKKSFGQQGKRRMNPR 140

Query: 421 MNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGCGEVVDCRICGDPNSILHFAFIEFTD 480
            +  +R+E+ RRTVYVSDIDQQVTEE LA +F G G+VVDCRICGDPNS+L FAFIEFTD
Sbjct: 141 TSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTD 200

Query: 481 EEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKV 540
           E GAR +L+LSGT+LGFYPV+V+PSKTAIAPVNP FLPR++DEREMC+RTIYCTNIDKK+
Sbjct: 201 EVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKL 260

Query: 541 TQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIR 600
           TQ ++KLFFES+CGEV RLRLLGDYHH TRI FVEF MAESAIAALNCSGV+LGSLPIR
Sbjct: 261 TQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCSGVLLGSLPIR 317

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g00050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPI5	1.0e-108	70.77	Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana OX=...	[more]
Q9S7N9	1.5e-107	64.47	Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana OX=...	[more]
Q9SG10	3.1e-105	53.71	Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana OX=...	[more]
Q9LRR6	1.5e-86	61.31	Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana OX=3...	[more]
Q9C8M0	1.9e-86	61.25	Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Cp4.1LG09g00050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542023.1	0.0	96.22	polyadenylate-binding protein-interacting protein 10-like [Cucurbita pepo subsp....	[more]
KAG6574264.1	1.88e-300	99.06	Polyadenylate-binding protein-interacting protein 11, partial [Cucurbita argyros...	[more]
XP_022945958.1	9.28e-283	99.25	polyadenylate-binding protein-interacting protein 12-like isoform X1 [Cucurbita ...	[more]
XP_022968474.1	3.09e-281	98.76	polyadenylate-binding protein-interacting protein 12-like isoform X1 [Cucurbita ...	[more]
XP_022945960.1	2.43e-280	99.00	polyadenylate-binding protein-interacting protein 12-like isoform X2 [Cucurbita ...	[more]

BLAST of Cp4.1LG09g00050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2E6	4.49e-283	99.25	polyadenylate-binding protein-interacting protein 12-like isoform X1 OS=Cucurbit...	[more]
A0A6J1HZR5	1.49e-281	98.76	polyadenylate-binding protein-interacting protein 12-like isoform X1 OS=Cucurbit...	[more]
A0A6J1G2G9	1.18e-280	99.00	polyadenylate-binding protein-interacting protein 12-like isoform X2 OS=Cucurbit...	[more]
A0A6J1HTL6	3.91e-279	98.51	polyadenylate-binding protein-interacting protein 12-like isoform X2 OS=Cucurbit...	[more]
A0A6J1JC04	9.68e-252	89.30	polyadenylate-binding protein-interacting protein 12 OS=Cucurbita maxima OX=3661...	[more]

BLAST of Cp4.1LG09g00050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32790.1	7.4e-110	70.77	CTC-interacting domain 11	[more]
AT4G10610.1	1.1e-108	64.47	CTC-interacting domain 12	[more]
AT3G49390.1	2.2e-106	53.71	CTC-interacting domain 10	[more]
AT3G49390.2	2.2e-106	53.71	CTC-interacting domain 10	[more]
AT4G10610.2	1.5e-102	64.21	CTC-interacting domain 12	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 433..503 e-value: 1.1E-12 score: 58.1 coord: 530..601 e-value: 1.9E-11 score: 54.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 531..598 e-value: 1.1E-8 score: 34.7 coord: 434..496 e-value: 3.1E-10 score: 39.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 432..507 score: 12.969665
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 529..605 score: 11.929285
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 515..613 e-value: 7.1E-14 score: 54.0 coord: 392..509 e-value: 2.5E-16 score: 62.0
IPR009818	Ataxin-2, C-terminal	PFAM	PF07145	PAM2	coord: 356..369 e-value: 3.1E-4 score: 20.2 coord: 141..154 e-value: 3.1E-4 score: 20.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..273
None	No IPR available	PANTHER	PTHR32343:SF36	POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 12-LIKE	coord: 216..617 coord: 1..176
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 216..617 coord: 1..176
IPR034823	CID8-like protein, RNA recognition motif 1	CDD	cd12459	RRM1_CID8_like	coord: 431..509 e-value: 4.97911E-49 score: 163.361
IPR034825	CID8-like protein, RNA recognition motif 2	CDD	cd12460	RRM2_CID8_like	coord: 525..606 e-value: 9.95286E-59 score: 189.245
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 396..508
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 518..611

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g00050.1	Cp4.1LG09g00050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding