Cp4.1LG09g00020 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g00020
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Heavy metal transport/detoxification superfamily protein
Location	Cp4.1LG09: 33843 .. 34519 (+)
RNA-Seq Expression	Cp4.1LG09g00020
Synteny	Cp4.1LG09g00020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCATGGCTAATTTGCAAATAGTTCCGGCTCACACCCCATTTCATGTGGAGCCTCAGCTGGTGGAGATGATGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAAGGCTCTCTCCCATCTCAAAGGTCTTATTTTGATTTCTAGTACAACACCCATCTATATATTCTCCAAAACCTCACACTAACAACATGCATGGTATGATTGCAGGGATATATTCAGTTAACGTAGATTACGACGAGCAGAAAGTGACGGTGTGGGGAATATGCAACAAAAACCAAGTGTTGAGCACTGTGAGAAGCAAGAGAAAAGCAGCTCGTTTTTGGAACACTGATGATGATGATAATAATAATAATGATCCACAAGCAGAAGAAGAAGGTCTAAACTCAAGAAGGCCTTCTTTTGGTGTTAACAAGCTTCGTTCCCTCAGTTTCAAATTAGCCTGCAAGAAGGTTTTCACCACTACAAGATCATATTCCTTGCGTATCTTTGGGGCTCCTACTGTTTCCTAACTTTTGTACATAATATATGTATCCATCTATCTTTTCACTCCATGGTCTTTGGATTCTCTAATCATCAATCTCAACATGAATGACTACTCCACACACTTCCACTAATCCTTTATTTCTACATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACTTCTTCTT

mRNA sequence

TGCATGGCTAATTTGCAAATAGTTCCGGCTCACACCCCATTTCATGTGGAGCCTCAGCTGGTGGAGATGATGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAAGGCTCTCTCCCATCTCAAAGGGATATATTCAGTTAACGTAGATTACGACGAGCAGAAAGTGACGGTGTGGGGAATATGCAACAAAAACCAAGTGTTGAGCACTGTGAGAAGCAAGAGAAAAGCAGCTCGTTTTTGGAACACTGATGATGATGATAATAATAATAATGATCCACAAGCAGAAGAAGAAGGTCTAAACTCAAGAAGGCCTTCTTTTGGTGTTAACAAGCTTCGTTCCCTCAGTTTCAAATTAGCCTGCAAGAAGGTTTTCACCACTACAAGATCATATTCCTTGCGTATCTTTGGGGCTCCTACTGTTTCCTAACTTTTGTACATAATATATGTATCCATCTATCTTTTCACTCCATGGTCTTTGGATTCTCTAATCATCAATCTCAACATGAATGACTACTCCACACACTTCCACTAATCCTTTATTTCTACATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACTTCTTCTT

Coding sequence (CDS)

TGCATGGCTAATTTGCAAATAGTTCCGGCTCACACCCCATTTCATGTGGAGCCTCAGCTGGTGGAGATGATGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAAGGCTCTCTCCCATCTCAAAGGGATATATTCAGTTAACGTAGATTACGACGAGCAGAAAGTGACGGTGTGGGGAATATGCAACAAAAACCAAGTGTTGAGCACTGTGAGAAGCAAGAGAAAAGCAGCTCGTTTTTGGAACACTGATGATGATGATAATAATAATAATGATCCACAAGCAGAAGAAGAAGGTCTAAACTCAAGAAGGCCTTCTTTTGGTGTTAACAAGCTTCGTTCCCTCAGTTTCAAATTAGCCTGCAAGAAGGTTTTCACCACTACAAGATCATATTCCTTGCGTATCTTTGGGGCTCCTACTGTTTCCTAA

Protein sequence

CMANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVWGICNKNQVLSTVRSKRKAARFWNTDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS

Homology

[Close]

BLAST of Cp4.1LG09g00020 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-07
Identity = 24/64 (37.50%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 20 LVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVWGICNKNQVLSTVRSKRKA 79
          +VE++V +   GC  K+ +A+S L G+ +V +D D QKVTV G  ++ +VL  V+   + 
Sbjct: 17 IVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRT 76

Query: 80 ARFW 84
          A +W
Sbjct: 77 AEYW 80

[Close]

BLAST of Cp4.1LG09g00020 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.7e-07
Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 0


Query: 19  QLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVWGICNKNQVLSTVRSKRK 78
           Q+V + V L+  GCA K+ K LS LKG+ S N+D+  +KVTV G      VL+++ SK K
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASI-SKVK 309

Query: 79  AARFW 84
            A+FW
Sbjct: 310 NAQFW 313

[Close]

BLAST of Cp4.1LG09g00020 vs. ExPASy Swiss-Prot
Match: F4IC29 (Heavy metal-associated isoprenylated plant protein 28 OS=Arabidopsis thaliana OX=3702 GN=HIPP28 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.0e-06
Identity = 23/68 (33.82%), Postives = 40/68 (58.82%), Query Frame = 0


Query: 16 VEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVWGICNKNQVLSTVRS 75
          ++ Q +EM V +   GC +++  AL  ++G+ +V +D  +QKVTV G  ++ +VL  VR 
Sbjct: 8  IQLQTIEMRVHMDCVGCESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKVRK 67

Query: 76 KRKAARFW 84
            + A  W
Sbjct: 68 TGRRAELW 75

[Close]

BLAST of Cp4.1LG09g00020 vs. ExPASy Swiss-Prot
Match: Q84J88 (Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX=3702 GN=HIPP36 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.0e-06
Identity = 25/72 (34.72%), Postives = 39/72 (54.17%), Query Frame = 0


Query: 23  MMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVWGICNKNQVLSTVRSKRKAARF 82
           + V ++  GC  KI K LS + G+Y+ N+D  +QKVTV G      ++  +    + A  
Sbjct: 34  LRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAEL 93

Query: 83  WNTDDDDNNNND 95
           W T  ++N NND
Sbjct: 94  WPTSMENNINND 105

[Close]

BLAST of Cp4.1LG09g00020 vs. ExPASy Swiss-Prot
Match: O65657 (Heavy metal-associated isoprenylated plant protein 23 OS=Arabidopsis thaliana OX=3702 GN=HIPP23 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.1e-05
Identity = 25/65 (38.46%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 19 QLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVWGICNKNQVLSTVRSKRK 78
          Q VE+ V +   GC  KI  +LS LKG+ +V ++  +QKVTV G  + ++VL   ++  K
Sbjct: 32 QTVELKVRMDCDGCVLKIKNSLSSLKGVKTVEINKKQQKVTVSGYADASKVLKKAKATGK 91

Query: 79 AARFW 84
           A  W
Sbjct: 92 KAEIW 96

[Close]

BLAST of Cp4.1LG09g00020 vs. NCBI nr
Match: XP_023542922.1 (heavy metal-associated isoprenylated plant protein 36 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293 bits (750), Expect = 4.42e-100
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 2   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 61
           MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW
Sbjct: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 60

Query: 62  GICNKNQVLSTVRSKRKAARFWNTDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKL 121
           GICNKNQVLSTVRSKRKAARFWNTDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKL
Sbjct: 61  GICNKNQVLSTVRSKRKAARFWNTDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKL 120

Query: 122 ACKKVFTTTRSYSLRIFGAPTVS 144
           ACKKVFTTTRSYSLRIFGAPTVS
Sbjct: 121 ACKKVFTTTRSYSLRIFGAPTVS 143

[Close]

BLAST of Cp4.1LG09g00020 vs. NCBI nr
Match: XP_022945716.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucurbita moschata])

HSP 1 Score: 290 bits (741), Expect = 1.04e-98
Identity = 141/143 (98.60%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 2   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 61
           MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDY+EQKVTVW
Sbjct: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVW 60

Query: 62  GICNKNQVLSTVRSKRKAARFWNTDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKL 121
           GICNKNQVLSTVRSKRKAARFWN DDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKL
Sbjct: 61  GICNKNQVLSTVRSKRKAARFWNNDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKL 120

Query: 122 ACKKVFTTTRSYSLRIFGAPTVS 144
           ACKKVFTTTRSYSLRIFGAPTVS
Sbjct: 121 ACKKVFTTTRSYSLRIFGAPTVS 143

[Close]

BLAST of Cp4.1LG09g00020 vs. NCBI nr
Match: KAG7013336.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285 bits (729), Expect = 7.30e-97
Identity = 141/144 (97.92%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 2   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 61
           MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDY+EQKVTVW
Sbjct: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVW 60

Query: 62  GICNKNQVLSTVRSKRKAARFWNT-DDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFK 121
           GICNKNQVLSTVRSKRKAARFWN  DDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFK
Sbjct: 61  GICNKNQVLSTVRSKRKAARFWNNNDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFK 120

Query: 122 LACKKVFTTTRSYSLRIFGAPTVS 144
           LACKKVFTTTRSYSLRIFGAPTVS
Sbjct: 121 LACKKVFTTTRSYSLRIFGAPTVS 144

[Close]

BLAST of Cp4.1LG09g00020 vs. NCBI nr
Match: XP_022968373.1 (heavy metal-associated isoprenylated plant protein 28 [Cucurbita maxima])

HSP 1 Score: 285 bits (729), Expect = 8.08e-97
Identity = 142/147 (96.60%), Postives = 142/147 (96.60%), Query Frame = 0


Query: 2   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 61
           MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW
Sbjct: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 60

Query: 62  GICNKNQVLSTVRSKRKAARFWNTDDDDNNNN----DPQAEEEGLNSRRPSFGVNKLRSL 121
           GICNKNQVLSTVRSKRKAARFWN DDDDNNNN    DPQAEEEGLNSRRPSFGVNKLRSL
Sbjct: 61  GICNKNQVLSTVRSKRKAARFWNKDDDDNNNNNNNNDPQAEEEGLNSRRPSFGVNKLRSL 120

Query: 122 SFKLACKKVFTTTRSYSLRIFGAPTVS 144
           SFKLACKKVFTTTRSYSLRIFGAPTVS
Sbjct: 121 SFKLACKKVFTTTRSYSLRIFGAPTVS 147

[Close]

BLAST of Cp4.1LG09g00020 vs. NCBI nr
Match: KAG6574268.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 281 bits (718), Expect = 3.59e-95
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 2   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 61
           MANLQIVPAH PFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDY+EQKVTVW
Sbjct: 1   MANLQIVPAHNPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVW 60

Query: 62  GICNKNQVLSTVRSKRKAARFWNTDDDD--NNNNDPQAEEEGLNSRRPSFGVNKLRSLSF 121
           GICNKNQVLSTVRSKRKAARFWN +DDD  NNNNDPQAEEEGLNSRRPSFGVNKLRSLSF
Sbjct: 61  GICNKNQVLSTVRSKRKAARFWNNNDDDENNNNNDPQAEEEGLNSRRPSFGVNKLRSLSF 120

Query: 122 KLACKKVFTTTRSYSLRIFGAPTVS 144
           KLACKKVFTTTRSYSLRIFGAPTVS
Sbjct: 121 KLACKKVFTTTRSYSLRIFGAPTVS 145

[Close]

BLAST of Cp4.1LG09g00020 vs. ExPASy TrEMBL
Match: A0A6J1G1N8 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Cucurbita moschata OX=3662 GN=LOC111449858 PE=4 SV=1)

HSP 1 Score: 290 bits (741), Expect = 5.04e-99
Identity = 141/143 (98.60%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 2   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 61
           MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDY+EQKVTVW
Sbjct: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVW 60

Query: 62  GICNKNQVLSTVRSKRKAARFWNTDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKL 121
           GICNKNQVLSTVRSKRKAARFWN DDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKL
Sbjct: 61  GICNKNQVLSTVRSKRKAARFWNNDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKL 120

Query: 122 ACKKVFTTTRSYSLRIFGAPTVS 144
           ACKKVFTTTRSYSLRIFGAPTVS
Sbjct: 121 ACKKVFTTTRSYSLRIFGAPTVS 143

[Close]

BLAST of Cp4.1LG09g00020 vs. ExPASy TrEMBL
Match: A0A6J1HXU2 (heavy metal-associated isoprenylated plant protein 28 OS=Cucurbita maxima OX=3661 GN=LOC111467638 PE=4 SV=1)

HSP 1 Score: 285 bits (729), Expect = 3.91e-97
Identity = 142/147 (96.60%), Postives = 142/147 (96.60%), Query Frame = 0


Query: 2   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 61
           MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW
Sbjct: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 60

Query: 62  GICNKNQVLSTVRSKRKAARFWNTDDDDNNNN----DPQAEEEGLNSRRPSFGVNKLRSL 121
           GICNKNQVLSTVRSKRKAARFWN DDDDNNNN    DPQAEEEGLNSRRPSFGVNKLRSL
Sbjct: 61  GICNKNQVLSTVRSKRKAARFWNKDDDDNNNNNNNNDPQAEEEGLNSRRPSFGVNKLRSL 120

Query: 122 SFKLACKKVFTTTRSYSLRIFGAPTVS 144
           SFKLACKKVFTTTRSYSLRIFGAPTVS
Sbjct: 121 SFKLACKKVFTTTRSYSLRIFGAPTVS 147

[Close]

BLAST of Cp4.1LG09g00020 vs. ExPASy TrEMBL
Match: A0A6J1CHX5 (uncharacterized protein LOC111011661 OS=Momordica charantia OX=3673 GN=LOC111011661 PE=4 SV=1)

HSP 1 Score: 169 bits (429), Expect = 1.75e-51
Identity = 97/141 (68.79%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 2   MANLQIVPAHT--PFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVT 61
           MA L IVPA T   ++VEPQLVEMMVPLYSHGCANK+HKALSHLKGIYSVNVD ++QKVT
Sbjct: 3   MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVT 62

Query: 62  VWGICNKNQVLSTVRSKRKAARFWN--TDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSL 121
           VWGICNK QVLSTVRSKRKAARFWN  T+ + +N+           S RP F V   RSL
Sbjct: 63  VWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPVVPPPAPPLSFRPRFAV---RSL 122

Query: 122 SFKLACKKVF--TTTRSYSLR 136
           S KLACKKV   TT RSYS R
Sbjct: 123 SLKLACKKVLNLTTPRSYSFR 140

[Close]

BLAST of Cp4.1LG09g00020 vs. ExPASy TrEMBL
Match: M0ZIL1 (HMA domain-containing protein OS=Solanum tuberosum OX=4113 GN=102593133 PE=4 SV=1)

HSP 1 Score: 159 bits (402), Expect = 1.58e-47
Identity = 83/133 (62.41%), Postives = 100/133 (75.19%), Query Frame = 0


Query: 2   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 61
           MAN+QIVPA    +VEPQ VEMMVPLYS+GC  KI+ ALSH+KGIYSVNVD+++QKVTVW
Sbjct: 1   MANMQIVPAGRNVNVEPQYVEMMVPLYSYGCERKINNALSHIKGIYSVNVDFEQQKVTVW 60

Query: 62  GICNKNQVLSTVRSKRKAARFWNTDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKL 121
           GICNK  VL+TVRSKRKAARFWNT+D+    ++  +        RP   + + RSLS+KL
Sbjct: 61  GICNKYDVLATVRSKRKAARFWNTEDNMEEYSETDSSATCRYRIRPPLALIRARSLSWKL 120

Query: 122 ACKKVFTTTRSYS 134
           A KK FT  RSYS
Sbjct: 121 ALKKAFT--RSYS 131

[Close]

BLAST of Cp4.1LG09g00020 vs. ExPASy TrEMBL
Match: A0A3Q7FME6 (HMA domain-containing protein OS=Solanum lycopersicum OX=4081 GN=101252962 PE=4 SV=1)

HSP 1 Score: 156 bits (394), Expect = 3.14e-46
Identity = 82/139 (58.99%), Postives = 101/139 (72.66%), Query Frame = 0


Query: 2   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 61
           MAN+QIVPA    +VEPQ VEMMVPLYS+GC  KI+ ALSH+KGIYSVNVD+++QKVT+W
Sbjct: 1   MANMQIVPAGRNVNVEPQYVEMMVPLYSYGCERKINNALSHIKGIYSVNVDFEQQKVTIW 60

Query: 62  GICNKNQVLSTVRSKRKAARFWNTDDD------DNNNNDPQAEEEGLNSRRPSFGVNKLR 121
           GICNK  VL+ VRSKRKAARFWN +D+      D++++ P A    +  R     + + R
Sbjct: 61  GICNKYDVLARVRSKRKAARFWNEEDNMEESERDSSSSSPAASRYRIRPRAQPLALIRAR 120

Query: 122 SLSFKLACKKVFTTTRSYS 134
           SLS KLA KK FT  RSYS
Sbjct: 121 SLSLKLALKKAFT--RSYS 137

[Close]

BLAST of Cp4.1LG09g00020 vs. TAIR 10
Match: AT4G27590.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 9.7e-29
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 0


Query: 2  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 61
          M +LQIVP +    VE Q VEMMVPLYS+GC  K+ +ALSHLKGIYSV VDY  QKVTVW
Sbjct: 1  MGDLQIVPVYN--KVEAQYVEMMVPLYSYGCEKKVKRALSHLKGIYSVKVDYYNQKVTVW 60

Query: 62 GICNKNQVLSTVRSKRKAARFWNTDDDDNNN 93
          GICNK  VL+ V+ KRK ARFWN ++++NNN
Sbjct: 61 GICNKLDVLAMVKKKRKEARFWNVEEEENNN 89

[Close]

BLAST of Cp4.1LG09g00020 vs. TAIR 10
Match: AT4G27590.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 9.7e-29
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 0


Query: 2  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 61
          M +LQIVP +    VE Q VEMMVPLYS+GC  K+ +ALSHLKGIYSV VDY  QKVTVW
Sbjct: 1  MGDLQIVPVYN--KVEAQYVEMMVPLYSYGCEKKVKRALSHLKGIYSVKVDYYNQKVTVW 60

Query: 62 GICNKNQVLSTVRSKRKAARFWNTDDDDNNN 93
          GICNK  VL+ V+ KRK ARFWN ++++NNN
Sbjct: 61 GICNKLDVLAMVKKKRKEARFWNVEEEENNN 89

[Close]

BLAST of Cp4.1LG09g00020 vs. TAIR 10
Match: AT3G56891.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 8.5e-09
Identity = 24/64 (37.50%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 20 LVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVWGICNKNQVLSTVRSKRKA 79
          +VE++V +   GC  K+ +A+S L G+ +V +D D QKVTV G  ++ +VL  V+   + 
Sbjct: 17 IVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRT 76

Query: 80 ARFW 84
          A +W
Sbjct: 77 AEYW 80

[Close]

BLAST of Cp4.1LG09g00020 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 1.9e-08
Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 0


Query: 19  QLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVWGICNKNQVLSTVRSKRK 78
           Q+V + V L+  GCA K+ K LS LKG+ S N+D+  +KVTV G      VL+++ SK K
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASI-SKVK 309

Query: 79  AARFW 84
            A+FW
Sbjct: 310 NAQFW 313

[Close]

BLAST of Cp4.1LG09g00020 vs. TAIR 10
Match: AT5G02600.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 1.9e-08
Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 0


Query: 19  QLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVWGICNKNQVLSTVRSKRK 78
           Q+V + V L+  GCA K+ K LS LKG+ S N+D+  +KVTV G      VL+++ SK K
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASI-SKVK 309

Query: 79  AARFW 84
            A+FW
Sbjct: 310 NAQFW 313

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g00020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3H6D0	1.2e-07	37.50	Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX...	[more]
Q8LDS4	2.7e-07	46.15	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
F4IC29	5.0e-06	33.82	Heavy metal-associated isoprenylated plant protein 28 OS=Arabidopsis thaliana OX...	[more]
Q84J88	5.0e-06	34.72	Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX...	[more]
O65657	1.1e-05	38.46	Heavy metal-associated isoprenylated plant protein 23 OS=Arabidopsis thaliana OX...	[more]

BLAST of Cp4.1LG09g00020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542922.1	4.42e-100	100.00	heavy metal-associated isoprenylated plant protein 36 [Cucurbita pepo subsp. pep...	[more]
XP_022945716.1	1.04e-98	98.60	protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucurbita moschata]	[more]
KAG7013336.1	7.30e-97	97.92	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp...	[more]
XP_022968373.1	8.08e-97	96.60	heavy metal-associated isoprenylated plant protein 28 [Cucurbita maxima]	[more]
KAG6574268.1	3.59e-95	95.86	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of Cp4.1LG09g00020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G1N8	5.04e-99	98.60	protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1HXU2	3.91e-97	96.60	heavy metal-associated isoprenylated plant protein 28 OS=Cucurbita maxima OX=366...	[more]
A0A6J1CHX5	1.75e-51	68.79	uncharacterized protein LOC111011661 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
M0ZIL1	1.58e-47	62.41	HMA domain-containing protein OS=Solanum tuberosum OX=4113 GN=102593133 PE=4 SV=...	[more]
A0A3Q7FME6	3.14e-46	58.99	HMA domain-containing protein OS=Solanum lycopersicum OX=4081 GN=101252962 PE=4 ...	[more]

BLAST of Cp4.1LG09g00020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27590.1	9.7e-29	65.93	Heavy metal transport/detoxification superfamily protein	[more]
AT4G27590.2	9.7e-29	65.93	Heavy metal transport/detoxification superfamily protein	[more]
AT3G56891.1	8.5e-09	37.50	Heavy metal transport/detoxification superfamily protein	[more]
AT5G02600.2	1.9e-08	46.15	Heavy metal transport/detoxification superfamily protein	[more]
AT5G02600.1	1.9e-08	46.15	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 17..82 e-value: 2.3E-11 score: 45.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..106
None	No IPR available	PANTHER	PTHR22814:SF305	HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN	coord: 2..107
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 2..107
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 24..62 e-value: 4.3E-10 score: 39.9
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 22..62 e-value: 1.42461E-9 score: 49.1413
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 19..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g00020.1	Cp4.1LG09g00020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding