Cp4.1LG08g13950 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g13950
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	OTU domain-containing protein
Location	Cp4.1LG08: 9978662 .. 9982562 (-)
RNA-Seq Expression	Cp4.1LG08g13950
Synteny	Cp4.1LG08g13950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAGATGTTTAATTTGTCTAAAACAAAATGGTAGGAAAATATCTTGTGGGAGCGGCTGATCGAAGGCGCCTAATGTTTCACCTACTTCTGCGAAGGTTTCTTAATTGGAACAGCTACTGTTCGAGAAGATTTGATCTTGGAGCAAACGCCTGGATGAAGCTACAGAACGAAACGAGTGGAAATTCAGAAGCAGCGTCTTCATTACAAATCCGACTNGTTTCTTAATTGGAACAGCTACTGTTCGAGAAGATTTGATCTTCGAGCAAACGCCTGGATGAAGCTACAGAACGAAACGAGTGGAAATTCAGAAGCAGCGTGTTCATTACAAATCCGACTAGGTAACATATGGATCATTGCCCTAATCTAATTCCGAAGCAATGCGTCTCAAAAAAGGGGCCGTGTGTTCGTGGCTCAACATTAATCGCAAAGTTACCGTTGCAGGTATTCTTTCCTTTAATCCCATTTCTTGAATCTTATGCCATTTTTGGGGTTTGCTTTTGTTGTTTCTTTCTTTCACGTGCTCGGGTTTTTCTTCGAATTTTAAATCTCCTCCCCTCTTCGATTTGATCCTCTGCTGCTTGCCTTCTGTTGATCTTTCGCTGTTTGATTTTGTTCTTTCTCAAGCTTTGTTCAGGGTTTTCAGATTCTTGACCTTCGTGTTTTTCCTTGCTCAATGGTAATGGGGACTCTTATTATCTTCGTTCTAGTTCTTTTTCTTTTTCCCCTTTCCTTGTTCGTTGTTAATTTTCTTTTGGGTGTGTGCATTTATAGCCATCTGCATGAACTTTGGTTTATATTTCAGTAACATAATGTGAATTCATATTGGCAGAACATGAGCTATTGCAGCTGAAATGTAAATTCTTAGTCATGGATATTTGTGATTTTAAGGCTGTTTATAACAAATGCATCGTTTATTCACCGATCGTAGCATAACTCAACTAGTTAAGACGTATAATCAAATAGTCACATATTTGAATTCCGTTTAAAGAGATTGTTGCATTGTATATTAGTTTGTTATTATAGCAAGTCTTTTACCGGCAGAGGACTTCTGAGGAAATGTAACAGTCCAAGCTTACCATTAGTAGATATTGTCTTTTTTGGGCTTTTCTTTTCGAGTTTCCCCTCAAGGTTTCTAAAACGCATCTGCTAGGATGAGATTTCCACACCGTTATAAAGCATGTTTCGTTCCCCTCTCTAACCAATGTGGGATCTCACGATCCACCCGCCTTCGAGGCAGTGTCCTCGCTAGCATTTGTTCCCCTATCCAATTGAGGTTGGATCTCACAGAAAAGGTCTTATACCTGCTAAAGATGTACTCAAAATCTGAACCTCACTAAGGCTTTCAGTTTTTGAAGCTGTGAGATTCAAGTTACACCTTCAGCTTATTGTACTGCATCATATTCTATATTACAAAAAAGAAACATGATCATTTTGTAGTATTCCTGAACAAAGGTTTTGTTTAAGTGGATATGATTTTTGGACTGTATGTTAATGTTTTTGTAGACATCGAATCCGTTTTCGTTCTTGGTTTGGTTTGGGCTCCTCTCGATCTTATTCGTAGTTAGGAAGGTGGAAGGAGTCTAAATCAATAGACATTAATGAACCATCATCGATGGACGTTGCACATGTCACACAATCAATTTGGTTTGGGCTCCTCTTGTTCATGTTAAGCATCAGAGATAAAAGAAGGGCGTTCAAATTTTTTGGTCCAAATTATGGAATGCTTTCAATTTCTGACTTGTTTCCTCTTTCTTTGTTCTGTTAATTTCTCAGGCTACACCAGCATGCCTATTGGCTCAATAAGCGTTTGCACGAGGAATGTTGTCCCTCTGAACTTCCGTGTTCGATCACAGATGGGCAGCAACATTTGTACCGTGCTGTCTCGAAGGACATCGAACTCTTGCTGTTCCTATGGCATTTCAAGACCAAAGTGTTCGGATCAAACCATCTCCACAATGTCGTCTTGTTCACCAAATACTAGCCAAAGATTTCAGGGAGGCTGTCTCAGTTATTGCTTCTCCAGACAGCCAATTGAGTTGAAGTCTTTTAAAGATTTGATTACAGATGAAGGGTTGTGTGGAAGAGGACTTGAAATTTCATTATCATCCAAAGGTATGAATATGAAACTCTCAATCCCCAATGATGTTCAAATATAACATACGATGGCCAGAAAGATGTGCATCTCATGGCTTGTTATTCAACTTCTGAACCAGTCCATGCTGAAGCAGCTTGTGAGAAAGAGGATAATGAAGAAAANGAATGTTGTCCCTCTGAACTTCCGTGTTCGATCACAGATGGGCAGCAACATTTGTACCGTGCTGTCTCGAAGGACATCGAACTCTTGCTGTTCCTATGGCGTTTCAAGACCAAAGTGTTCGGATCAAACCATCTCCACAATGTCGTCTTGTTCACCAAATACTAGCCAAAGATTTCAGGGAGGCTGTCTCAGTTATTGCTTCTCCAGACAGCCAATTGAGTTGAAGTCTTTTAAAGATTTGATTACGGATGAAGGGTTGTGTGGAAGAGGACTTGAAATTTCATTATCATGCAAAGGTATGAATATGAAACTCTCAATCCCCAATGATAATCAAATATAACATACGATGGCCAGAAAGATGTGCATCTGATGGCTTGTTATTCAACTTCTGAACCAGTTCATGCTGAAGCAGCTTGTGAGAAAGAGGATAATGAAGAAAATTCTGATTCTTCTCATGTCAAACTCTCTCATGGAAAAAAGGTTTACACTAAGTATTCTGTTATAGGTGAGCTTCGAAGCCTTCTACGTCTTCTTTTACGTTACACGGTCAAATCGACAATTGATTGTAGCAAATTGTTTGTTCTGGGCAGGAATTCCCGGAGATGGACGATGTTTGTTCCGCTCGGTCGCTCATGGTGCTTGTTTACGATCTGGGAAACCAGCTCCAAGCCAGAACCTTCAGAGAGATTTGGCAGATGAGTTACGGACTAAAGTAAGTTTTATTAGTTTGTTTTTAAGAGAATACCATGGTGACAAGAATCCATATTTCAGACCAAGTTCTTTGCAAAATTGGCCCTTTACTTATAATGATAGATCACTCATCTTTCAGGTTGCAGATGAGTTTATCAAGAGACGAGAGGAAACAGAATGGTGACTCTCTCTCTCTCTCAAAAGAATTTTAAGTTCGTGAGGATCTCTAAGATCTATTAAACACATTTTAAAGTCCAAGAACATTTTAGACACAAATTTAAAAGTTCAATGACTAAACTATCTCTACCGTATAGAACAAGATGAGGTTCTCCCATATCCATCCTGGTCTCACAATAACATCCTGCCTGTGTTGACAATAGGTTCATTGAAGGTGATTTCGATACATATGTGTCTAATATGCGAAAACCACGCGTATGGGGAGGCGAGCCCGAGCTATTCATGGCCTCTCATATTCTTCAGTAAGCGCTTCCTCTCAATACTTGTTTCTCTACTGTGGTATATGAATGAATTGCTTGTTAAGATTGAAGGCTGTGGTTGCTGCTGCAGTGCACCTATCATAGTGTACATGTACGATAAAGCTTCTGGTGGGTTGATATCCATTGCTGAATATGGCGATGAATATGGCAAACAAAATCCCATCACAGTTCTGTACCATGGCTTTGGCCATTACGATGCTTTGCAAATTCCTGCAAATCAAGGGGTCAGTATATCAAAACTTTAGTGTTCCTTAGTCAATTATTGTGAATTAATTCATCCTATTTCATTCTATAAATAAATTTCAATTTCCATTTCAATGATGGATATGAGAATCCATCATGTACATTACTGAATATCTTGTATCTGTATGTCAAAATAGGTTTAGTCCTTTCGTTTCGACCCATGTCATGAATTTGTAAGTGGCTCTAGAGTCGACCATAGTGCTCTTGGTC

mRNA sequence

AAAAAAAGATGTTTAATTTGTCTAAAACAAAATGGTAGGAAAATATCTTGTGGGAGCGGCTGATCGAAGGCGCCTAATGTTTCACCTACTTCTGCGAAGGTTTCTTAATTGGAACAGCTACTGTTCGAGAAGATTTGATCTTGGAGCAAACGCCTGGATGAAGCTACAGAACGAAACGAGTGGAAATTCAGAAGCAGCGTCTTCATTACAAATCCGACTNGTTTCTTAATTGGAACAGCTACTGTTCGAGAAGATTTGATCTTCGAGCAAACGCCTGGATGAAGCTACAGAACGAAACGAGTGGAAATTCAGAAGCAGCGTGTTCATTACAAATCCGACTAGGTAACATATGGATCATTGCCCTAATCTAATTCCGAAGCAATGCGTCTCAAAAAAGGGGCCGTGTGTTCGTGGCTCAACATTAATCGCAAAGTTACCGTTGCAGGCTACACCAGCATGCCTATTGGCTCAATAAGCGTTTGCACGAGGAATGTTGTCCCTCTGAACTTCCGTGTTCGATCACAGATGGGCAGCAACATTTGTACCGTGCTGTCTCGAAGGACATCGAACTCTTGCTGTTCCTATGGCATTTCAAGACCAAAGTGTTCGGATCAAACCATCTCCACAATGTCGTCTTGTTCACCAAATACTAGCCAAAGATTTCAGGGAGGCTGTCTCAGTTATTGCTTCTCCAGACAGCCAATTGAGTTGAAGTCTTTTAAAGATTTGATTACAGATGAAGGGTTGTGTGGAAGAGGACTTGAAATTTCATTATCATCCAAAGAAAGATGTGCATCTGATGGCTTGTTATTCAACTTCTGAACCAGTTCATGCTGAAGCAGCTTGTGAGAAAGAGGATAATGAAGAAAATTCTGATTCTTCTCATGTCAAACTCTCTCATGGAAAAAAGGAATTCCCGGAGATGGACGATGTTTGTTCCGCTCGGTCGCTCATGGTGCTTGTTTACGATCTGGGAAACCAGCTCCAAGCCAGAACCTTCAGAGAGATTTGGCAGATGAGTTACGGACTAAAGTTCATTGAAGGTGATTTCGATACATATGTGTCTAATATGCGAAAACCACGCGTATGGGGAGGCGAGCCCGAGCTATTCATGGCCTCTCATATTCTTCATGCACCTATCATAGTGTACATGTACGATAAAGCTTCTGGTGGGTTGATATCCATTGCTGAATATGGCGATGAATATGGCAAACAAAATCCCATCACAGTTCTGTACCATGGCTTTGGCCATTACGATGCTTTGCAAATTCCTGCAAATCAAGGGGTCAGTATATCAAAACTTTAGTGTTCCTTAGTCAATTATTGTGAATTAATTCATCCTATTTCATTCTATAAATAAATTTCAATTTCCATTTCAATGATGGATATGAGAATCCATCATGTACATTACTGAATATCTTGTATCTGTATGTCAAAATAGGTTTAGTCCTTTCGTTTCGACCCATGTCATGAATTTGTAAGTGGCTCTAGAGTCGACCATAGTGCTCTTGGTC

Coding sequence (CDS)

ATGAAGGGTTGTGTGGAAGAGGACTTGAAATTTCATTATCATCCAAAGAAAGATGTGCATCTGATGGCTTGTTATTCAACTTCTGAACCAGTTCATGCTGAAGCAGCTTGTGAGAAAGAGGATAATGAAGAAAATTCTGATTCTTCTCATGTCAAACTCTCTCATGGAAAAAAGGAATTCCCGGAGATGGACGATGTTTGTTCCGCTCGGTCGCTCATGGTGCTTGTTTACGATCTGGGAAACCAGCTCCAAGCCAGAACCTTCAGAGAGATTTGGCAGATGAGTTACGGACTAAAGTTCATTGAAGGTGATTTCGATACATATGTGTCTAATATGCGAAAACCACGCGTATGGGGAGGCGAGCCCGAGCTATTCATGGCCTCTCATATTCTTCATGCACCTATCATAGTGTACATGTACGATAAAGCTTCTGGTGGGTTGATATCCATTGCTGAATATGGCGATGAATATGGCAAACAAAATCCCATCACAGTTCTGTACCATGGCTTTGGCCATTACGATGCTTTGCAAATTCCTGCAAATCAAGGGGTCAGTATATCAAAACTTTAG

Protein sequence

MKGCVEEDLKFHYHPKKDVHLMACYSTSEPVHAEAACEKEDNEENSDSSHVKLSHGKKEFPEMDDVCSARSLMVLVYDLGNQLQARTFREIWQMSYGLKFIEGDFDTYVSNMRKPRVWGGEPELFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIPANQGVSISKL

Homology

[Close]

BLAST of Cp4.1LG08g13950 vs. ExPASy Swiss-Prot
Match: Q8LBZ4 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OS=Arabidopsis thaliana OX=3702 GN=OTU4 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.0e-34
Identity = 83/181 (45.86%), Postives = 108/181 (59.67%), Query Frame = 0


Query: 19  VHLMACY-STSEPVHAEAACEKEDNEENSDSSHVKLSHGKKEFPEM-------DDVCSAR 78
           V L+ CY STS+  +A+++ +K+ N  +  SS  K  +GK+ + +        D  C  R
Sbjct: 123 VSLLVCYSSTSQSAYADSSRDKDANNVHHHSSDGKFHNGKRVYTDYSIIGIPGDGRCLFR 182

Query: 79  SLM--------------VLVYDLGNQLQARTFREIWQMSYGLK-FIEGDFDTYVSNMRKP 138
           S+                +  +L ++L+ R   E  Q     + F+EGDFDTYV  +R P
Sbjct: 183 SVAHGFCLRSGKLAPGEKMQRELADELRTRVADEFIQRRQETEWFVEGDFDTYVRQIRDP 242

Query: 139 RVWGGEPELFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDA 177
            VWGGEPELFMASH+L  PI VYM D  +GGLISIAEYG EYGK +PI VLYHGFGHYDA
Sbjct: 243 HVWGGEPELFMASHVLQMPITVYMKDDKAGGLISIAEYGQEYGKDDPIRVLYHGFGHYDA 302

[Close]

BLAST of Cp4.1LG08g13950 vs. ExPASy Swiss-Prot
Match: Q8GYW0 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 3 OS=Arabidopsis thaliana OX=3702 GN=OTU3 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.3e-05
Identity = 30/75 (40.00%), Postives = 39/75 (52.00%), Query Frame = 0


Query: 118 WGGEPELFMASHILHAPIIVYMYDKASG-------GLISIAEYGDEY------GK--QNP 177
           WGGE EL + S +   PIIVY+ +   G       G I I EYG E+      GK  +N 
Sbjct: 160 WGGESELLVLSKLCKQPIIVYIPEHEHGRGGGYGPGFIPIQEYGSEFRGGWGKGKTNKNV 219

[Close]

BLAST of Cp4.1LG08g13950 vs. NCBI nr
Match: XP_023538805.1 (OTU domain-containing protein At3g57810-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023538806.1 OTU domain-containing protein At3g57810-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023538807.1 OTU domain-containing protein At3g57810-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236 bits (603), Expect = 8.29e-75
Identity = 129/186 (69.35%), Postives = 138/186 (74.19%), Query Frame = 0


Query: 26  STSEPVHAEAACEKEDNEENSDSSHVKLSHGKKEFPEM-------DDVCSARSL------ 85
           S S  VHAEAACEKEDNEENSDSSHVKLSHGKK + +        D  C  RS+      
Sbjct: 105 SLSSKVHAEAACEKEDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACL 164

Query: 86  --------MVLVYDLGNQLQARTFREIWQMSYGLK-FIEGDFDTYVSNMRKPRVWGGEPE 145
                     L  DL ++L+ +   E  +     + FIEGDFDTYVSNMRKPRVWGGEPE
Sbjct: 165 RSGKPAPSQNLQRDLADELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPE 224

Query: 146 LFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIPANQG 189
           LFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIPANQG
Sbjct: 225 LFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIPANQG 284

[Close]

BLAST of Cp4.1LG08g13950 vs. NCBI nr
Match: XP_023538803.1 (OTU domain-containing protein At3g57810-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236 bits (603), Expect = 1.79e-74
Identity = 129/186 (69.35%), Postives = 138/186 (74.19%), Query Frame = 0


Query: 26  STSEPVHAEAACEKEDNEENSDSSHVKLSHGKKEFPEM-------DDVCSARSL------ 85
           S S  VHAEAACEKEDNEENSDSSHVKLSHGKK + +        D  C  RS+      
Sbjct: 130 SLSSKVHAEAACEKEDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACL 189

Query: 86  --------MVLVYDLGNQLQARTFREIWQMSYGLK-FIEGDFDTYVSNMRKPRVWGGEPE 145
                     L  DL ++L+ +   E  +     + FIEGDFDTYVSNMRKPRVWGGEPE
Sbjct: 190 RSGKPAPSQNLQRDLADELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPE 249

Query: 146 LFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIPANQG 189
           LFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIPANQG
Sbjct: 250 LFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIPANQG 309

[Close]

BLAST of Cp4.1LG08g13950 vs. NCBI nr
Match: XP_023538804.1 (OTU domain-containing protein At3g57810-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235 bits (599), Expect = 7.21e-74
Identity = 129/186 (69.35%), Postives = 138/186 (74.19%), Query Frame = 0


Query: 26  STSEPVHAEAACEKEDNEENSDSSHVKLSHGKKEFPEM-------DDVCSARSL------ 85
           S S  VHAEAACEKEDNEENSDSSHVKLSHGKK + +        D  C  RS+      
Sbjct: 130 SLSCKVHAEAACEKEDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACL 189

Query: 86  --------MVLVYDLGNQLQARTFREIWQMSYGLK-FIEGDFDTYVSNMRKPRVWGGEPE 145
                     L  DL ++L+ +   E  +     + FIEGDFDTYVSNMRKPRVWGGEPE
Sbjct: 190 RSGKPAPSQNLQRDLADELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPE 249

Query: 146 LFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIPANQG 189
           LFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIPANQG
Sbjct: 250 LFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIPANQG 309

[Close]

BLAST of Cp4.1LG08g13950 vs. NCBI nr
Match: KAG6596224.1 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 230 bits (586), Expect = 6.68e-72
Identity = 126/186 (67.74%), Postives = 138/186 (74.19%), Query Frame = 0


Query: 26  STSEPVHAEAACEKEDNEENSDSSHVKLSHGKKEFPEM-------DDVCSARSL------ 85
           S S  VHAEAACEK+DNEENSDSSHVKLSHGKK + +        D  C  RS+      
Sbjct: 130 SLSCKVHAEAACEKDDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACL 189

Query: 86  --------MVLVYDLGNQLQARTFREIWQMSYGLK-FIEGDFDTYVSNMRKPRVWGGEPE 145
                     L  DL ++L+ +   E  +     + FIEGDF+TYVSNMRKPRVWGGEPE
Sbjct: 190 RSGKPAPSQNLQRDLADELRTKVADEFIKRREETEWFIEGDFNTYVSNMRKPRVWGGEPE 249

Query: 146 LFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIPANQG 189
           LFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIPA+QG
Sbjct: 250 LFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIPAHQG 309

[Close]

BLAST of Cp4.1LG08g13950 vs. NCBI nr
Match: XP_008443087.1 (PREDICTED: OTU domain-containing protein At3g57810 isoform X1 [Cucumis melo] >XP_008443088.1 PREDICTED: OTU domain-containing protein At3g57810 isoform X1 [Cucumis melo] >XP_008443089.1 PREDICTED: OTU domain-containing protein At3g57810 isoform X1 [Cucumis melo] >XP_008443090.1 PREDICTED: OTU domain-containing protein At3g57810 isoform X1 [Cucumis melo] >KAA0043710.1 OTU domain-containing protein [Cucumis melo var. makuwa] >TYK25424.1 OTU domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 229 bits (585), Expect = 1.82e-71
Identity = 123/190 (64.74%), Postives = 137/190 (72.11%), Query Frame = 0


Query: 22  MACYSTSEPVHAEAACEKEDNEENSDSSHVKLSHGKKEFPEM-------DDVCSARSLM- 81
           + CYSTSEPVHAEAA EK+DNEENSDSSHVKLSHGKK + +        D  C  RS+  
Sbjct: 148 VVCYSTSEPVHAEAAYEKDDNEENSDSSHVKLSHGKKVYTDYSVIGIPGDGRCLFRSVAH 207

Query: 82  -------------VLVYDLGNQLQARTFREIWQMSYGLK-FIEGDFDTYVSNMRKPRVWG 141
                         L  DL ++L++    E  +     + F+EGDFDTYVSNMRKP VWG
Sbjct: 208 GACLRSGKPAPSESLQRDLADELRSNVADEFIKRREETEWFVEGDFDTYVSNMRKPHVWG 267

Query: 142 GEPELFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIP 189
           GEPELFMASH+L APIIVYMYDK SGGLISIAEYGDEYGK+NPI VLYHGFGHYDALQIP
Sbjct: 268 GEPELFMASHVLQAPIIVYMYDKDSGGLISIAEYGDEYGKENPIRVLYHGFGHYDALQIP 327

[Close]

BLAST of Cp4.1LG08g13950 vs. ExPASy TrEMBL
Match: A0A0A0LBW9 (OTU domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G810520 PE=4 SV=1)

HSP 1 Score: 229 bits (583), Expect = 7.21e-72
Identity = 115/168 (68.45%), Postives = 127/168 (75.60%), Query Frame = 0


Query: 22  MACYSTSEPVHAEAACEKEDNEENSDSSHVKLSHGKKEFPEMDDVCSARSLMVLVYDLGN 81
           + CYSTSEPVHAEAA EK+DNEENSDSSHVKLSHGKK + +   +        L   + +
Sbjct: 147 VVCYSTSEPVHAEAAYEKDDNEENSDSSHVKLSHGKKVYTDYSVIGIPGDGRCLFRSVAD 206

Query: 82  QLQARTFREIWQMSYGLKFIEGDFDTYVSNMRKPRVWGGEPELFMASHILHAPIIVYMYD 141
           +   R     W       F+EGDFDTY+SNMR P VWGGEPELFMASH+L APIIVYMYD
Sbjct: 207 EFIKRREETEW-------FVEGDFDTYMSNMRNPHVWGGEPELFMASHVLQAPIIVYMYD 266

Query: 142 KASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIPANQGVSISKL 189
           K SGGLISIAEYGDEYGK+NPI VLYHGFGHYDALQIPANQGV  SKL
Sbjct: 267 KDSGGLISIAEYGDEYGKENPIRVLYHGFGHYDALQIPANQGVGRSKL 307

[Close]

BLAST of Cp4.1LG08g13950 vs. ExPASy TrEMBL
Match: A0A1S3B6T1 (OTU domain-containing protein At3g57810 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486791 PE=4 SV=1)

HSP 1 Score: 229 bits (585), Expect = 8.82e-72
Identity = 123/190 (64.74%), Postives = 137/190 (72.11%), Query Frame = 0


Query: 22  MACYSTSEPVHAEAACEKEDNEENSDSSHVKLSHGKKEFPEM-------DDVCSARSLM- 81
           + CYSTSEPVHAEAA EK+DNEENSDSSHVKLSHGKK + +        D  C  RS+  
Sbjct: 148 VVCYSTSEPVHAEAAYEKDDNEENSDSSHVKLSHGKKVYTDYSVIGIPGDGRCLFRSVAH 207

Query: 82  -------------VLVYDLGNQLQARTFREIWQMSYGLK-FIEGDFDTYVSNMRKPRVWG 141
                         L  DL ++L++    E  +     + F+EGDFDTYVSNMRKP VWG
Sbjct: 208 GACLRSGKPAPSESLQRDLADELRSNVADEFIKRREETEWFVEGDFDTYVSNMRKPHVWG 267

Query: 142 GEPELFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIP 189
           GEPELFMASH+L APIIVYMYDK SGGLISIAEYGDEYGK+NPI VLYHGFGHYDALQIP
Sbjct: 268 GEPELFMASHVLQAPIIVYMYDKDSGGLISIAEYGDEYGKENPIRVLYHGFGHYDALQIP 327

[Close]

BLAST of Cp4.1LG08g13950 vs. ExPASy TrEMBL
Match: A0A5D3DP86 (OTU domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005670 PE=4 SV=1)

HSP 1 Score: 229 bits (585), Expect = 8.82e-72
Identity = 123/190 (64.74%), Postives = 137/190 (72.11%), Query Frame = 0


Query: 22  MACYSTSEPVHAEAACEKEDNEENSDSSHVKLSHGKKEFPEM-------DDVCSARSLM- 81
           + CYSTSEPVHAEAA EK+DNEENSDSSHVKLSHGKK + +        D  C  RS+  
Sbjct: 148 VVCYSTSEPVHAEAAYEKDDNEENSDSSHVKLSHGKKVYTDYSVIGIPGDGRCLFRSVAH 207

Query: 82  -------------VLVYDLGNQLQARTFREIWQMSYGLK-FIEGDFDTYVSNMRKPRVWG 141
                         L  DL ++L++    E  +     + F+EGDFDTYVSNMRKP VWG
Sbjct: 208 GACLRSGKPAPSESLQRDLADELRSNVADEFIKRREETEWFVEGDFDTYVSNMRKPHVWG 267

Query: 142 GEPELFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIP 189
           GEPELFMASH+L APIIVYMYDK SGGLISIAEYGDEYGK+NPI VLYHGFGHYDALQIP
Sbjct: 268 GEPELFMASHVLQAPIIVYMYDKDSGGLISIAEYGDEYGKENPIRVLYHGFGHYDALQIP 327

[Close]

BLAST of Cp4.1LG08g13950 vs. ExPASy TrEMBL
Match: A0A6J1DJP8 (OTU domain-containing protein At3g57810 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021529 PE=4 SV=1)

HSP 1 Score: 217 bits (552), Expect = 8.67e-67
Identity = 118/192 (61.46%), Postives = 135/192 (70.31%), Query Frame = 0


Query: 22  MACYSTSEPVHAEAACEKEDNEENSDSSHVKLSHGKKEFPEM-------DDVCSARSLM- 81
           + CYS+SEPVHAEAACEKEDNEENSDSS VK SHGK  + +        D  C  RS+  
Sbjct: 147 VVCYSSSEPVHAEAACEKEDNEENSDSSPVKFSHGKTVYTDYSVIGIPGDGRCLFRSVAH 206

Query: 82  -------------VLVYDLGNQLQARTFREIWQMSYGLK-FIEGDFDTYVSNMRKPRVWG 141
                         L  DL ++L+ +   E  +     + F+EGDFD YVSNMRKP +WG
Sbjct: 207 GACLRSGKAAPSESLQRDLADELRNKVADEFIKRRKETEWFVEGDFDRYVSNMRKPHIWG 266

Query: 142 GEPELFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIP 189
           GEPELFMASH+LHAPIIVYMYDK SGGLISIAEYGDEYGK+NPI VLYHGFGHYDALQIP
Sbjct: 267 GEPELFMASHVLHAPIIVYMYDKDSGGLISIAEYGDEYGKENPIRVLYHGFGHYDALQIP 326

[Close]

BLAST of Cp4.1LG08g13950 vs. ExPASy TrEMBL
Match: A0A6J1FB45 (OTU domain-containing protein At3g57810 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442443 PE=4 SV=1)

HSP 1 Score: 209 bits (532), Expect = 9.49e-64
Identity = 111/184 (60.33%), Postives = 129/184 (70.11%), Query Frame = 0


Query: 22  MACYSTSEPVHAEAACEKEDNEENSDSSHVKLSHGKKEFPEM-------DDVCSARSLM- 81
           + C STSEPVHAEAA +K+ NEEN+DSSHVK SHGKK + +        D  C  RS+  
Sbjct: 150 VVCCSTSEPVHAEAAYDKKGNEENNDSSHVKFSHGKKVYIDYSVIGIPGDGRCLFRSVAH 209

Query: 82  -------------VLVYDLGNQLQARTFREIWQMSYGLK-FIEGDFDTYVSNMRKPRVWG 141
                         L  +L ++L+ +   E  +     + F+EGDFDTYVSNMRKP +WG
Sbjct: 210 GACLRSGKSAPTESLQRELADELRTKVADEFIKRREETEWFVEGDFDTYVSNMRKPHIWG 269

Query: 142 GEPELFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIP 183
           GEPELFMASH+L APIIVYMYDK +GGLISIAEYGDEYGK NPI VLYHGFGHYDALQIP
Sbjct: 270 GEPELFMASHVLQAPIIVYMYDKDAGGLISIAEYGDEYGKDNPIKVLYHGFGHYDALQIP 329

[Close]

BLAST of Cp4.1LG08g13950 vs. TAIR 10
Match: AT3G57810.1 (Cysteine proteinases superfamily protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.4e-35
Identity = 83/181 (45.86%), Postives = 108/181 (59.67%), Query Frame = 0


Query: 19  VHLMACY-STSEPVHAEAACEKEDNEENSDSSHVKLSHGKKEFPEM-------DDVCSAR 78
           V L+ CY STS+  +A+++ +K+ N  +  SS  K  +GK+ + +        D  C  R
Sbjct: 80  VSLLVCYSSTSQSAYADSSRDKDANNVHHHSSDGKFHNGKRVYTDYSIIGIPGDGRCLFR 139

Query: 79  SLM--------------VLVYDLGNQLQARTFREIWQMSYGLK-FIEGDFDTYVSNMRKP 138
           S+                +  +L ++L+ R   E  Q     + F+EGDFDTYV  +R P
Sbjct: 140 SVAHGFCLRSGKLAPGEKMQRELADELRTRVADEFIQRRQETEWFVEGDFDTYVRQIRDP 199

Query: 139 RVWGGEPELFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDA 177
            VWGGEPELFMASH+L  PI VYM D  +GGLISIAEYG EYGK +PI VLYHGFGHYDA
Sbjct: 200 HVWGGEPELFMASHVLQMPITVYMKDDKAGGLISIAEYGQEYGKDDPIRVLYHGFGHYDA 259

[Close]

BLAST of Cp4.1LG08g13950 vs. TAIR 10
Match: AT3G57810.2 (Cysteine proteinases superfamily protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.4e-35
Identity = 83/181 (45.86%), Postives = 108/181 (59.67%), Query Frame = 0


Query: 19  VHLMACY-STSEPVHAEAACEKEDNEENSDSSHVKLSHGKKEFPEM-------DDVCSAR 78
           V L+ CY STS+  +A+++ +K+ N  +  SS  K  +GK+ + +        D  C  R
Sbjct: 123 VSLLVCYSSTSQSAYADSSRDKDANNVHHHSSDGKFHNGKRVYTDYSIIGIPGDGRCLFR 182

Query: 79  SLM--------------VLVYDLGNQLQARTFREIWQMSYGLK-FIEGDFDTYVSNMRKP 138
           S+                +  +L ++L+ R   E  Q     + F+EGDFDTYV  +R P
Sbjct: 183 SVAHGFCLRSGKLAPGEKMQRELADELRTRVADEFIQRRQETEWFVEGDFDTYVRQIRDP 242

Query: 139 RVWGGEPELFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDA 177
            VWGGEPELFMASH+L  PI VYM D  +GGLISIAEYG EYGK +PI VLYHGFGHYDA
Sbjct: 243 HVWGGEPELFMASHVLQMPITVYMKDDKAGGLISIAEYGQEYGKDDPIRVLYHGFGHYDA 302

[Close]

BLAST of Cp4.1LG08g13950 vs. TAIR 10
Match: AT3G57810.3 (Cysteine proteinases superfamily protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.4e-35
Identity = 83/181 (45.86%), Postives = 108/181 (59.67%), Query Frame = 0


Query: 19  VHLMACY-STSEPVHAEAACEKEDNEENSDSSHVKLSHGKKEFPEM-------DDVCSAR 78
           V L+ CY STS+  +A+++ +K+ N  +  SS  K  +GK+ + +        D  C  R
Sbjct: 123 VSLLVCYSSTSQSAYADSSRDKDANNVHHHSSDGKFHNGKRVYTDYSIIGIPGDGRCLFR 182

Query: 79  SLM--------------VLVYDLGNQLQARTFREIWQMSYGLK-FIEGDFDTYVSNMRKP 138
           S+                +  +L ++L+ R   E  Q     + F+EGDFDTYV  +R P
Sbjct: 183 SVAHGFCLRSGKLAPGEKMQRELADELRTRVADEFIQRRQETEWFVEGDFDTYVRQIRDP 242

Query: 139 RVWGGEPELFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDA 177
            VWGGEPELFMASH+L  PI VYM D  +GGLISIAEYG EYGK +PI VLYHGFGHYDA
Sbjct: 243 HVWGGEPELFMASHVLQMPITVYMKDDKAGGLISIAEYGQEYGKDDPIRVLYHGFGHYDA 302

[Close]

BLAST of Cp4.1LG08g13950 vs. TAIR 10
Match: AT2G38025.1 (Cysteine proteinases superfamily protein )

HSP 1 Score: 50.1 bits (118), Expect = 2.3e-06
Identity = 30/75 (40.00%), Postives = 39/75 (52.00%), Query Frame = 0


Query: 118 WGGEPELFMASHILHAPIIVYMYDKASG-------GLISIAEYGDEY------GK--QNP 177
           WGGE EL + S +   PIIVY+ +   G       G I I EYG E+      GK  +N 
Sbjct: 160 WGGESELLVLSKLCKQPIIVYIPEHEHGRGGGYGPGFIPIQEYGSEFRGGWGKGKTNKNV 219

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g13950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LBZ4	2.0e-34	45.86	OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OS=Arabidopsis thalian...	[more]
Q8GYW0	3.3e-05	40.00	OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 3 OS=Arabidopsis thalian...	[more]

BLAST of Cp4.1LG08g13950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538805.1	8.29e-75	69.35	OTU domain-containing protein At3g57810-like isoform X3 [Cucurbita pepo subsp. p...	[more]
XP_023538803.1	1.79e-74	69.35	OTU domain-containing protein At3g57810-like isoform X1 [Cucurbita pepo subsp. p...	[more]
XP_023538804.1	7.21e-74	69.35	OTU domain-containing protein At3g57810-like isoform X2 [Cucurbita pepo subsp. p...	[more]
KAG6596224.1	6.68e-72	67.74	OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4, partial [Cucurbita ar...	[more]
XP_008443087.1	1.82e-71	64.74	PREDICTED: OTU domain-containing protein At3g57810 isoform X1 [Cucumis melo] >XP...	[more]

BLAST of Cp4.1LG08g13950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBW9	7.21e-72	68.45	OTU domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G810520 PE=4 SV...	[more]
A0A1S3B6T1	8.82e-72	64.74	OTU domain-containing protein At3g57810 isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5D3DP86	8.82e-72	64.74	OTU domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1DJP8	8.67e-67	61.46	OTU domain-containing protein At3g57810 isoform X1 OS=Momordica charantia OX=367...	[more]
A0A6J1FB45	9.49e-64	60.33	OTU domain-containing protein At3g57810 isoform X2 OS=Cucurbita moschata OX=3662...	[more]

BLAST of Cp4.1LG08g13950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57810.1	1.4e-35	45.86	Cysteine proteinases superfamily protein	[more]
AT3G57810.2	1.4e-35	45.86	Cysteine proteinases superfamily protein	[more]
AT3G57810.3	1.4e-35	45.86	Cysteine proteinases superfamily protein	[more]
AT2G38025.1	2.3e-06	40.00	Cysteine proteinases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.70.80		coord: 84..187 e-value: 6.8E-22 score: 79.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..54
None	No IPR available	PANTHER	PTHR12419:SF8	OS09G0487700 PROTEIN	coord: 100..183
None	No IPR available	PANTHER	PTHR12419	OTU DOMAIN CONTAINING PROTEIN	coord: 100..183
IPR003323	OTU domain	PFAM	PF02338	OTU	coord: 94..173 e-value: 1.7E-13 score: 51.2
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 99..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g13950.1	Cp4.1LG08g13950.1	mRNA