Cp4.1LG08g13940 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGATTTGGGAGAATTGGATCATGCCCTCTTTCTATATCTTGATGGACAAGAACCCTCCACAAACATCACCCAACAAGATCAAAGACGTATTTTTTTTCTCTTTTTCCGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNTCTGTGGTTGTACTTCTTTGACCATAACACACTCTTTGTTCCTCTCTCTCTCTCTCTCTCTCTTATGGGGTTTCAGCATATGTTTTATTCCTTTTGGCTCTTCCATTTCTTACCCTTTTCTCTTCTCAAACATTACATGCATTCAAACCCTTCTCTCCTCCTTAAATTTACCATAATTTGTCCGTTGAAGCATTCTTTATAAGGGTGTGTTTGTTTTTTTTTTTGTTGCAGAGAGTTCGGGGATGAGACCGGCGACGTTGAACATCTTCCCGTCGCAGCCGATGCACGTCGACCCATTACCAGCAAAAGTAAATAAATGAGAAAAATTGCATCTTTTCTCCAAGTTGATGATTAGTTATGATATTAAATGGATTAAGAAAAGAAGAAGAAGAAGAAGAAGACATTTTTTTTTTTTCTTTTTTGAATTTGGGAGTATATGAAATTTGGATTTGGTGTTGTAGGCAAACACAGCATTGGTTAACCATGGTGATTCAAAGATCAAAGCATCAGAGCCATCCAAGGAGTTGGCCAACCAACGCAGCAGTGGAGCCACTCCATCCGGACCACCCCCAACTCCAACTCCAAACCCAAACCCAAACCCAACTACAACAATAACCGAACCTCATGCCAAACCTCCAAAAGTAAACCTTTTTTTTTAAATTAAATAAAAACAAAATCACTTCTTAATTAACATTAAATTGAACCCTTTTTTCTTTGTCGCAGCGTGAGGCTAACAAGAAAGGGCTGACCTCAAGCTCAGAGCAAGAAGGACCCAAAACTCCAGACCCCAAGGTCTAAAAATCCCACCTTTTTCATTCTATACCTGTTTTTGACCTCATTCACCCTTAAAAATGCCTTCTTTTTGCTTCATTTTCAGACTCTTAGAAGGCTGGCTCAGAACCGAGAGGCCGCAAGAAAAAGCAGGCTAAGAAAAAAGGTCCTTTTTTTGCTTTCTTTCTCGTGTATTGAGAATTGTTGGAAGTGAGTCCCACCTCCACTAATTTAGGAAATGATATATTTCTCCGTTCGCATGAGCCCAAAACCCAAAGTAAAGCCACGAAAGCATAGGCTCAAAGTACACAATACCATATCATTATATAGAGTCATGATTCCTTCGATACATTTTCAGGCCTATGTTCAGCAGTTGGAGCTGAGTAGGATTAAGCTGACGCAACTGGAGCAAGAGCTACAAAGAGCAAGAACTCAGGTAATATATATATATATATATTTGGAGTTTAATTCATTATTTTGTAACTTGATGTTATTGCTGGTGCTCATTAGGGTATGCTTGTGGGTGGCGGAGCAGCCATTTTAGGAGCTGACCAAGGACTTCCCCCCGGTTTCCATAACCTCAGCTCCGGTAACAATCCCTAATTATTAGTAATTACGTACGTTCACGATGGTATGATATTATCTTACTTATAAACCTTATACTCTTGTAGATGCCGCGGTGTTCGACATTGAGTATAGGCGGTGGCAAGAGGAGCACCACCGGCTGATGTGCGAGCTCCGAGCAGCTGTGCAGGAACATTTACCGGAAAACGAGCTCCGATTGTTTGTCGACAACTGCCTTGTCCACTACGACGAGGTTTTGAACTTGAAAATGATGGTGGCTAAGTCCGACGTCTTCCACCTTGTCTCCGGCATGTGGAAGACGCCGGCGGAGAGATGCTTCTTGTGGATGGGCGATTTTAGGCCCTCTGAGCTCCTTAAGGTACCTTTTCATTATTATCTCTTTGGTTTTTCCTTCCTAATTTTCTTTCTTCACCAAAAGGAAACTAACATAATAATATCAACAATAATTATAATAATAATAATAAGTATTATTATAATAATAATAACAACATTATTATTATTTAACATGGGTATATTTTTAAAAATCTATTTCTCAGGTCGAGAAATTATTCGACATGGTTGGAACGTTGTCACCAGCAACAGTATAGTATTAGATATATTGTTGCTGGTGACACTGTTCCTACCCTGTCGAATAATTTCTCGACCATAAAACCCAAAAAAAGGGGTATAATGATGGGACGGGAAGCGACAACATTGTGTGTTTGGTTGTTTTTCTCGAAAGTGTGAAGCAACAATAAATGACGAAAGGGTATTGAAATTTTGCATAATATGTAAGGATTAGGTAATGCAATGTAGAAAGGCAATACCTTTATACTACAAATTGGTTGTGTGTGTGACATAGAAATGGATGGAAATGGCAAGAATTGCATGGCTCTCTCTCTTTGTCTCTAAGAATAAATGCTATTTTTGACCATAAAAATTAACCCCAAAAGTTTGGTGTGTGTTTGTGTAGATAGTAATGGGTGAAATAGAGCCATTAACTGAGCATCAAATATTGAACATTTGTGGATTGCAACAATCCACACAAGAGAGCGAAGAGGCATTGTCTGAAGGCCTTGAAGCCCTTAACCAATCCTTATCAGACACCATCGCCGCTGATTCATTGAGTAACCCTCCCAATATGGCTAACTACATGGGCCAGATGACCTTAGCCATCAACAAGCTCTCGACCCTCGAAGGCTTTGTACGACAGGTACCCTCTCCTATCTCTCTTCACAATAGTACGATATTGTCCACTTTGAATTGGGAAATGAGAAGTCCTATCCTTTTCCTGATCCAAAAGCAACTCTCGTTATATCCCAAAGTGTTCATGTGGTTGGTTGGTTGGCTACTGGAATCTACGAATATGTCTATCTCTGTTCTATTATTCGTTTTGTTCTTTATCTTCTTCCCGACACCTACCTTTCAAAACGTGACCCACCATACAATATCCAAAGATAAATGATTGAGCAACTAATAAATTATAAGTTTTTATAAAAGACGAATGAGATGTTAGGTTTGAGTTTTGTTTAGTAATATAATTTGTTGTTATTTGACTTTGTTTTGTTGTGATTGTAGGCAGATCATTTGAGACATCAAACCATTCATCGATTGCATCAAATGTTGACGACCCGACAAGCTGCACGATNTTTGTTGTTATTTGACTTTGTTTTGTTGTGATTGTAGGCAGATCATTTGAGACATCAAACCATTCATCGATTGCATCAAATGTTGACGACCCGACAAGCTGCACGATGTCTGCTAGCCATTGCGGAGTATTTTCATCGGCTTCGAGCTCTTAGTTCCTTGTGGTTAGCTCGACCGAGGCAGGATTGAGTCGGAAGTATACCCTTTTTTAAGTGACAAAATCTTAACTTCTTCCCTTTTAGCTCATGAAGCTCTCTCTAAGATATAGCTATAGAACATGAGATATAGATAAATAAAATAGTTGTTGATGAACCATTTTCTCTCACTAATTATAAATATACAAAGCAAATAGGTCTTTGATTCCTCAAGGATGGAAGAAAAGTCCAAAATAAAAACAACTCTAAGCAGCTTCCACACAATAATCAAAGAAATGTTGTTTTGTTTATTTTCA TGATTTGGGAGAATTGGATCATGCCCTCTTTCTATATCTTGATGGACAAGAACCCTCCACAAACATCACCCAACAAGATCAAAGACAGAGTTCGGGGATGAGACCGGCGACGTTGAACATCTTCCCGTCGCAGCCGATGCACGTCGACCCATTACCAGCAAAAGCAAACACAGCATTGGTTAACCATGGTGATTCAAAGATCAAAGCATCAGAGCCATCCAAGGAGTTGGCCAACCAACGCAGCAGTGGAGCCACTCCATCCGGACCACCCCCAACTCCAACTCCAAACCCAAACCCAAACCCAACTACAACAATAACCGAACCTCATGCCAAACCTCCAAAACGTGAGGCTAACAAGAAAGGGCTGACCTCAAGCTCAGAGCAAGAAGGACCCAAAACTCCAGACCCCAAGGGTATGCTTGTGGGTGGCGGAGCAGCCATTTTAGGAGCTGACCAAGGACTTCCCCCCGGTTTCCATAACCTCAGCTCCGATGCCGCGGTGTTCGACATTGAGTATAGGCGGTGGCAAGAGGAGCACCACCGGCTGATGTGCGAGCTCCGAGCAGCTGTGCAGGAACATTTACCGGAAAACGAGCTCCGATTGTTTGTCGACAACTGCCTTGTCCACTACGACGAGGTTTTGAACTTGAAAATGATGGTGGCTAAGTCCGACGTCTTCCACCTTGTCTCCGGCATGTGGAAGACGCCGGCGGAGAGATGCTTCTTGTGGATGGGCGATTTTAGGCCCTCTGAGCTCCTTAAGGCAGATCATTTGAGACATCAAACCATTCATCGATTGCATCAAATGTTGACGACCCGACAAGCTGCACGATGTCTGCTAGCCATTGCGGAGTATTTTCATCGGCTTCGAGCTCTTAGTTCCTTGTGGTTAGCTCGACCGAGGCAGGATTGAGTCGGAAGTATACCCTTTTTTAAGTGACAAAATCTTAACTTCTTCCCTTTTAGCTCATGAAGCTCTCTCTAAGATATAGCTATAGAACATGAGATATAGATAAATAAAATAGTTGTTGATGAACCATTTTCTCTCACTAATTATAAATATACAAAGCAAATAGGTCTTTGATTCCTCAAGGATGGAAGAAAAGTCCAAAATAAAAACAACTCTAAGCAGCTTCCACACAATAATCAAAGAAATGTTGTTTTGTTTATTTTCA ATGAGACCGGCGACGTTGAACATCTTCCCGTCGCAGCCGATGCACGTCGACCCATTACCAGCAAAAGCAAACACAGCATTGGTTAACCATGGTGATTCAAAGATCAAAGCATCAGAGCCATCCAAGGAGTTGGCCAACCAACGCAGCAGTGGAGCCACTCCATCCGGACCACCCCCAACTCCAACTCCAAACCCAAACCCAAACCCAACTACAACAATAACCGAACCTCATGCCAAACCTCCAAAACGTGAGGCTAACAAGAAAGGGCTGACCTCAAGCTCAGAGCAAGAAGGACCCAAAACTCCAGACCCCAAGGGTATGCTTGTGGGTGGCGGAGCAGCCATTTTAGGAGCTGACCAAGGACTTCCCCCCGGTTTCCATAACCTCAGCTCCGATGCCGCGGTGTTCGACATTGAGTATAGGCGGTGGCAAGAGGAGCACCACCGGCTGATGTGCGAGCTCCGAGCAGCTGTGCAGGAACATTTACCGGAAAACGAGCTCCGATTGTTTGTCGACAACTGCCTTGTCCACTACGACGAGGTTTTGAACTTGAAAATGATGGTGGCTAAGTCCGACGTCTTCCACCTTGTCTCCGGCATGTGGAAGACGCCGGCGGAGAGATGCTTCTTGTGGATGGGCGATTTTAGGCCCTCTGAGCTCCTTAAGGCAGATCATTTGAGACATCAAACCATTCATCGATTGCATCAAATGTTGACGACCCGACAAGCTGCACGATGTCTGCTAGCCATTGCGGAGTATTTTCATCGGCTTCGAGCTCTTAGTTCCTTGTGGTTAGCTCGACCGAGGCAGGATTGA MRPATLNIFPSQPMHVDPLPAKANTALVNHGDSKIKASEPSKELANQRSSGATPSGPPPTPTPNPNPNPTTTITEPHAKPPKREANKKGLTSSSEQEGPKTPDPKGMLVGGGAAILGADQGLPPGFHNLSSDAAVFDIEYRRWQEEHHRLMCELRAAVQEHLPENELRLFVDNCLVHYDEVLNLKMMVAKSDVFHLVSGMWKTPAERCFLWMGDFRPSELLKADHLRHQTIHRLHQMLTTRQAARCLLAIAEYFHRLRALSSLWLARPRQD Homology
BLAST of Cp4.1LG08g13940 vs. ExPASy Swiss-Prot
Match: Q52MZ2 (bZIP transcription factor TGA10 OS=Nicotiana tabacum OX=4097 GN=TGA10 PE=1 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 1.2e-77 Identity = 182/398 (45.73%), Postives = 206/398 (51.76%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. ExPASy Swiss-Prot
Match: E3VNM4 (Transcription factor TGA10 OS=Arabidopsis thaliana OX=3702 GN=TGA10 PE=1 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 2.5e-62 Identity = 166/414 (40.10%), Postives = 199/414 (48.07%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. ExPASy Swiss-Prot
Match: Q6H434 (Transcription factor TGAL7 OS=Oryza sativa subsp. japonica OX=39947 GN=TGAL7 PE=1 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 2.0e-40 Identity = 133/397 (33.50%), Postives = 185/397 (46.60%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. ExPASy Swiss-Prot
Match: O49067 (Transcription factor LG2 OS=Zea mays OX=4577 GN=LG2 PE=2 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.4e-36 Identity = 90/247 (36.44%), Postives = 121/247 (48.99%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. ExPASy Swiss-Prot
Match: Q7X993 (Transcription factor TGA2.1 OS=Oryza sativa subsp. japonica OX=39947 GN=TGA2.1 PE=1 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.4e-36 Identity = 90/227 (39.65%), Postives = 116/227 (51.10%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. NCBI nr
Match: XP_023540200.1 (bZIP transcription factor TGA10-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 486 bits (1251), Expect = 1.64e-168 Identity = 271/397 (68.26%), Postives = 271/397 (68.26%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. NCBI nr
Match: KAG6596226.1 (bZIP transcription factor TGA10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 473 bits (1217), Expect = 1.94e-163 Identity = 265/392 (67.60%), Postives = 266/392 (67.86%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. NCBI nr
Match: XP_022971215.1 (bZIP transcription factor TGA10-like [Cucurbita maxima]) HSP 1 Score: 473 bits (1217), Expect = 2.01e-163 Identity = 266/397 (67.00%), Postives = 267/397 (67.25%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. NCBI nr
Match: KAG7027769.1 (bZIP transcription factor TGA10, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 472 bits (1215), Expect = 4.62e-163 Identity = 266/397 (67.00%), Postives = 266/397 (67.00%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. NCBI nr
Match: XP_022931638.1 (bZIP transcription factor TGA10-like [Cucurbita moschata] >XP_022931697.1 bZIP transcription factor TGA10-like [Cucurbita moschata]) HSP 1 Score: 465 bits (1196), Expect = 3.09e-160 Identity = 263/397 (66.25%), Postives = 263/397 (66.25%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. ExPASy TrEMBL
Match: A0A6J1I550 (bZIP transcription factor TGA10-like OS=Cucurbita maxima OX=3661 GN=LOC111470005 PE=3 SV=1) HSP 1 Score: 473 bits (1217), Expect = 9.72e-164 Identity = 266/397 (67.00%), Postives = 267/397 (67.25%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. ExPASy TrEMBL
Match: A0A6J1EUE4 (bZIP transcription factor TGA10-like OS=Cucurbita moschata OX=3662 GN=LOC111437771 PE=3 SV=1) HSP 1 Score: 465 bits (1196), Expect = 1.50e-160 Identity = 263/397 (66.25%), Postives = 263/397 (66.25%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. ExPASy TrEMBL
Match: A0A0A0LBW4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G810480 PE=3 SV=1) HSP 1 Score: 395 bits (1016), Expect = 3.69e-133 Identity = 234/400 (58.50%), Postives = 244/400 (61.00%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. ExPASy TrEMBL
Match: A0A1S3B776 (transcription factor HBP-1b(C38) isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486785 PE=3 SV=1) HSP 1 Score: 392 bits (1008), Expect = 6.18e-132 Identity = 232/400 (58.00%), Postives = 244/400 (61.00%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. ExPASy TrEMBL
Match: A0A1S3B7A0 (transcription factor HBP-1b(C38) isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486785 PE=3 SV=1) HSP 1 Score: 388 bits (996), Expect = 4.04e-130 Identity = 230/398 (57.79%), Postives = 242/398 (60.80%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. TAIR 10
Match: AT5G06839.3 (bZIP transcription factor family protein ) HSP 1 Score: 240.4 bits (612), Expect = 1.7e-63 Identity = 166/414 (40.10%), Postives = 199/414 (48.07%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. TAIR 10
Match: AT5G06839.1 (bZIP transcription factor family protein ) HSP 1 Score: 217.6 bits (553), Expect = 1.2e-56 Identity = 149/370 (40.27%), Postives = 186/370 (50.27%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. TAIR 10
Match: AT5G06839.2 (bZIP transcription factor family protein ) HSP 1 Score: 213.0 bits (541), Expect = 3.0e-55 Identity = 149/371 (40.16%), Postives = 186/371 (50.13%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. TAIR 10
Match: AT1G08320.1 (bZIP transcription factor family protein ) HSP 1 Score: 145.2 bits (365), Expect = 7.6e-35 Identity = 108/325 (33.23%), Postives = 148/325 (45.54%), Query Frame = 0
BLAST of Cp4.1LG08g13940 vs. TAIR 10
Match: AT1G08320.2 (bZIP transcription factor family protein ) HSP 1 Score: 145.2 bits (365), Expect = 7.6e-35 Identity = 108/325 (33.23%), Postives = 148/325 (45.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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