Cp4.1LG08g13880 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g13880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	zinc finger protein WIP2-like
Location	Cp4.1LG08: 9954659 .. 9956500 (-)
RNA-Seq Expression	Cp4.1LG08g13880
Synteny	Cp4.1LG08g13880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAACACAATCTCTCTCCCACTCTCCACCGTTCACTTCCTTCAGTCATCTTCTTCTTCTCTCTCTCTCTATAAAAGCATTCCACCATTAAAGCCACCACCACACCTAAACACATTAAAAAGAAGAACAAATAAGAAAAGAAACTATTCCCTCTCCTTCCCACAGATCCCTTTTCCCATTAATCCCACTTCCACCATGGATGATCCTTCCACTAATTTCTTCACAGATCTCTTCAAATTCAACTATCCCACTAATTTCCACCACCACCACAACCCTCCTTCTTCAAATCCTCCTCCCAATTTCTTCCACGCGCCGCCGTCTTCTCCTCCACTCCGGCAGGCCCTCCCCCTTCTCCGCCTCAGCCCCACAAGGTCATCTCAAGACCACCACCTCTCTTTTACTTCCTCCTCCGCCATGGAAATTGACAACAACAACAACCACAACAACGATAACGAGGATGTTTCGGTGACGGTTGCACTTCACATAGGGCTTCCAAGCTCTAATGCCTCAGAAATGGCGACCCTTTTGGTGTCTGATAATAATAATCAAAATGAGGAAGAAGATCAATTGGAAGAAGAATTAGAAGAAGAAGAAGATGAAGATGAAGAACAGCAACAAGCGGGTATCACAATTTCTGGATTCTCTTTGAGTAGCAGACTCAATAAAGGACAGTATTGGATCCCTACTCCTTCTCAAATCCTCATTGGTCCTACTCAATTTTCTTGTCCTGTTTGTTTCAAAACCTTCAATCGATACAACAACATGCAGGTAAACCTCTCAAAATTCCATCTTTTATGCTTTGTTCTTACAAATTTCAAATTTTTCTTAATGGGTTCTTCTTTTTTTGCATGGATTTGTTGTTGATTATGATGGGGTTTGATTCAATTAATGTTTAATTTTTGTTTAGTGATTGAACAACACACGCAATGTTCTTTGTGCCCCCTCCCTCTCTCCCCTTTTAGTATCTTGAACTCTGTGCTTCCCTTGTTTTAGAGGTTCTTTTTTGGGTCTTGCAAATTTTCTTTTGTTTCTCTCAAATGGGTCTTCCAAAGTTTTGATTTTTATGACACTAGAGCCTTCAAAATCTCAACTTTGTTATGCTAATGCATTGTTTGATATGAACAAAATTGAAAAAAAAAATGGGTATTATAGATGCACATGTGGGGGCATGGTTCACAATACAGGCGAGGCCCGGAGTCCTTGAGAGGCACACAGCCAACGGGGATGCTCAGGCTGCCGTGCTACTGCTGCTCGCCGGGCTGCCGCAACAACATCGACCATCCGAGAGCGAAGCCATTGAAGGACTTCCGAACGCTTCAAACGCATTACAAACGCAAGCATGGAATCAAGCCTTTTATGTGTAGGAAATGTGGTAAAGCCTTTGCTGTTAGAGGGGATTGGAGAACTCATGAGAAGAATTGTGGGAAGCTTTGGTATTGCATTTGTGGCTCTGATTTTAAGCATAAGAGATCGCTTAAAGATCATATCAAAGCCTTTGGAAATGGGCATGCTGCTTATAATAGTAATATTAATAACAACTGTGATCATCGTCAACAACAACATCATCATCATCATCATCATCATCATCATCATCATCATGCGTTCGATGAGGAGGACGAGTCGGCTTATTCTGAAGTCGAGGAAGATCATGATTGATTTTGTTGTGTTCTAATGGAGATTTGAGTATGTTTTTTTTTATCTATATGGGGTTTAAGGGAACCTTATTCTTACATATTTTTAGTATATACATGTTACAAAATCCAGATGGCTCTTTTTCCAAATTGAATTTACCCTTTTTAATCAACTTCCCTTGGTTTCGTCCGATTGTCATGCTCGAGTTGAC

mRNA sequence

ATAACACAATCTCTCTCCCACTCTCCACCGTTCACTTCCTTCAGTCATCTTCTTCTTCTCTCTCTCTCTATAAAAGCATTCCACCATTAAAGCCACCACCACACCTAAACACATTAAAAAGAAGAACAAATAAGAAAAGAAACTATTCCCTCTCCTTCCCACAGATCCCTTTTCCCATTAATCCCACTTCCACCATGGATGATCCTTCCACTAATTTCTTCACAGATCTCTTCAAATTCAACTATCCCACTAATTTCCACCACCACCACAACCCTCCTTCTTCAAATCCTCCTCCCAATTTCTTCCACGCGCCGCCGTCTTCTCCTCCACTCCGGCAGGCCCTCCCCCTTCTCCGCCTCAGCCCCACAAGGTCATCTCAAGACCACCACCTCTCTTTTACTTCCTCCTCCGCCATGGAAATTGACAACAACAACAACCACAACAACGATAACGAGGATGTTTCGGTGACGGTTGCACTTCACATAGGGCTTCCAAGCTCTAATGCCTCAGAAATGGCGACCCTTTTGGTGTCTGATAATAATAATCAAAATGAGGAAGAAGATCAATTGGAAGAAGAATTAGAAGAAGAAGAAGATGAAGATGAAGAACAGCAACAAGCGGGTATCACAATTTCTGGATTCTCTTTGAGTAGCAGACTCAATAAAGGACAGTATTGGATCCCTACTCCTTCTCAAATCCTCATTGGTCCTACTCAATTTTCTTGTCCTGTTTGTTTCAAAACCTTCAATCGATACAACAACATGCAGATGCACATGTGGGGGCATGGTTCACAATACAGGCGAGGCCCGGAGTCCTTGAGAGGCACACAGCCAACGGGGATGCTCAGGCTGCCGTGCTACTGCTGCTCGCCGGGCTGCCGCAACAACATCGACCATCCGAGAGCGAAGCCATTGAAGGACTTCCGAACGCTTCAAACGCATTACAAACGCAAGCATGGAATCAAGCCTTTTATGTGTAGGAAATGTGGTAAAGCCTTTGCTGTTAGAGGGGATTGGAGAACTCATGAGAAGAATTGTGGGAAGCTTTGGTATTGCATTTGTGGCTCTGATTTTAAGCATAAGAGATCGCTTAAAGATCATATCAAAGCCTTTGGAAATGGGCATGCTGCTTATAATAGTAATATTAATAACAACTGTGATCATCGTCAACAACAACATCATCATCATCATCATCATCATCATCATCATCATCATGCGTTCGATGAGGAGGACGAGTCGGCTTATTCTGAAGTCGAGGAAGATCATGATTGATTTTGTTGTGTTCTAATGGAGATTTGAGTATGTTTTTTTTTATCTATATGGGGTTTAAGGGAACCTTATTCTTACATATTTTTAGTATATACATGTTACAAAATCCAGATGGCTCTTTTTCCAAATTGAATTTACCCTTTTTAATCAACTTCCCTTGGTTTCGTCCGATTGTCATGCTCGAGTTGAC

Coding sequence (CDS)

ATGGATGATCCTTCCACTAATTTCTTCACAGATCTCTTCAAATTCAACTATCCCACTAATTTCCACCACCACCACAACCCTCCTTCTTCAAATCCTCCTCCCAATTTCTTCCACGCGCCGCCGTCTTCTCCTCCACTCCGGCAGGCCCTCCCCCTTCTCCGCCTCAGCCCCACAAGGTCATCTCAAGACCACCACCTCTCTTTTACTTCCTCCTCCGCCATGGAAATTGACAACAACAACAACCACAACAACGATAACGAGGATGTTTCGGTGACGGTTGCACTTCACATAGGGCTTCCAAGCTCTAATGCCTCAGAAATGGCGACCCTTTTGGTGTCTGATAATAATAATCAAAATGAGGAAGAAGATCAATTGGAAGAAGAATTAGAAGAAGAAGAAGATGAAGATGAAGAACAGCAACAAGCGGGTATCACAATTTCTGGATTCTCTTTGAGTAGCAGACTCAATAAAGGACAGTATTGGATCCCTACTCCTTCTCAAATCCTCATTGGTCCTACTCAATTTTCTTGTCCTGTTTGTTTCAAAACCTTCAATCGATACAACAACATGCAGATGCACATGTGGGGGCATGGTTCACAATACAGGCGAGGCCCGGAGTCCTTGAGAGGCACACAGCCAACGGGGATGCTCAGGCTGCCGTGCTACTGCTGCTCGCCGGGCTGCCGCAACAACATCGACCATCCGAGAGCGAAGCCATTGAAGGACTTCCGAACGCTTCAAACGCATTACAAACGCAAGCATGGAATCAAGCCTTTTATGTGTAGGAAATGTGGTAAAGCCTTTGCTGTTAGAGGGGATTGGAGAACTCATGAGAAGAATTGTGGGAAGCTTTGGTATTGCATTTGTGGCTCTGATTTTAAGCATAAGAGATCGCTTAAAGATCATATCAAAGCCTTTGGAAATGGGCATGCTGCTTATAATAGTAATATTAATAACAACTGTGATCATCGTCAACAACAACATCATCATCATCATCATCATCATCATCATCATCATCATGCGTTCGATGAGGAGGACGAGTCGGCTTATTCTGAAGTCGAGGAAGATCATGATTGA

Protein sequence

MDDPSTNFFTDLFKFNYPTNFHHHHNPPSSNPPPNFFHAPPSSPPLRQALPLLRLSPTRSSQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQNEEEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNSNINNNCDHRQQQHHHHHHHHHHHHHAFDEEDESAYSEVEEDHD

Homology

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BLAST of Cp4.1LG08g13880 vs. ExPASy Swiss-Prot
Match: Q9SVY1 (Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.9e-119
Identity = 239/406 (58.87%), Postives = 272/406 (67.00%), Query Frame = 0


Query: 1   MDDPSTNFFTDLFKFNYPTNFHHH---------HNPPSSNPPPNFFH------------- 60
           M DP +NFFTD FK N    FHH+         H  P   PP +FF              
Sbjct: 1   MTDPYSNFFTDWFKSN---PFHHYPNSSTNPSPHPLPPVTPPSSFFFFPQSGDLRRPPPP 60

Query: 61  -APPSSPPLRQALPLLRLSPTRSSQDHH------LSFTSSSAMEID-----NNNNHNNDN 120
             PP SPPLR+ALPLL LSP    QDHH      +    S++M++D      +++HN D+
Sbjct: 61  PTPPPSPPLREALPLLSLSPANKQQDHHHNHDHLIQEPPSTSMDVDYDHHHQDDHHNLDD 120

Query: 121 EDVSVTVALHIGLPSSNASEMATLLVSDNNNQNEEEDQLEEELEEEEDED---------- 180
           +D  VTVALHIGLPS +A EMA+LL+  +++ +       E++  ++D D          
Sbjct: 121 DDHDVTVALHIGLPSPSAQEMASLLMMSSSSSSSRTTHHHEDMNHKKDLDHEYSHGAVGG 180

Query: 181 -EEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW 240
            E+  +  +   G    SRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW
Sbjct: 181 GEDDDEDSVGGDGGCRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW 240

Query: 241 GHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHG 300
           GHGSQYR+GPESLRGTQPTGMLRLPCYCC+PGCRNNIDHPRAKPLKDFRTLQTHYKRKHG
Sbjct: 241 GHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHG 300

Query: 301 IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNS 359
           IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGH AY  
Sbjct: 301 IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGI 360

[Close]

BLAST of Cp4.1LG08g13880 vs. ExPASy Swiss-Prot
Match: Q8W030 (Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.4e-94
Identity = 182/318 (57.23%), Postives = 223/318 (70.13%), Query Frame = 0


Query: 5   STNFFTDLFK-FNYPTNFHHHHNP--PSSNPPPNFFHAPPSSPPLRQALPLLRLSPTRSS 64
           S N+ T L + +N   +F++ H    P+ N  PN     P SPPLR+ALPLL LSP    
Sbjct: 83  SFNYATSLSRIYNSHDSFYYPHQTTNPNINENPNL--TSPDSPPLREALPLLSLSPIHKH 142

Query: 65  QD---HHLSFTSSSAMEIDNNNNHNNDNEDV---SVTVALHIGLPS---SNASEMATLLV 124
           Q+   +H  +      E  +N+N  +  +D     VTV LH+GLP+     +S    +L 
Sbjct: 143 QEPTANHHEYYFMETTETSSNSNFLDQCQDSYRHDVTVDLHLGLPNLGDGGSSSSDVVLD 202

Query: 125 SDNNNQNEEEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGP 184
           S ++ +   +   ++ LE     D + +  G       L    +   +WIPTPSQIL+GP
Sbjct: 203 STDHQEGHHDHHQDQGLEVTMASDHDDEHGG-------LQRGNHLHHFWIPTPSQILMGP 262

Query: 185 TQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNI 244
           TQFSCP+CFKTFNRYNNMQMHMWGHGSQYR+GPESLRGTQPT ML+LPCYCC+PGC+NNI
Sbjct: 263 TQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGCKNNI 322

Query: 245 DHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSD 304
           DHPRA+PLKDFRTLQTHYKRKHG++PF CR+CGKAFAV+GDWRTHEKNCGKLWYC CGSD
Sbjct: 323 DHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSD 382

Query: 305 FKHKRSLKDHIKAFGNGH 311
           FKHKRSLKDH+KAFGNGH
Sbjct: 383 FKHKRSLKDHVKAFGNGH 391

[Close]

BLAST of Cp4.1LG08g13880 vs. ExPASy Swiss-Prot
Match: Q8W031 (Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 9.3e-94
Identity = 189/332 (56.93%), Postives = 228/332 (68.67%), Query Frame = 0


Query: 1   MDDPS-TNFFT---DLFKFNYPTNFHHHHNPP-----SSNPPPNFFH------APPSSPP 60
           M +P+ +N F    D   FNY T+  + +N       S+   PN+ +        P+SPP
Sbjct: 1   MSNPACSNLFNNGCDHNSFNYSTSLSYIYNSHGSYYYSNTTNPNYINHTHTTSTSPNSPP 60

Query: 61  LRQALPLLRLSPTR--SSQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSN 120
           LR+ALPLL LSP R    QD H    +       +  + +N  +D  VTV LH+GLP+  
Sbjct: 61  LREALPLLSLSPIRHQEQQDQHYFMDT-------HQISSSNFLDDPLVTVDLHLGLPNYG 120

Query: 121 ASE-MATLLVSDNNNQNEEEDQ---LEEELEEEEDEDEEQQQAGITISGFSLSSRLNKG- 180
             E + + +  D     +++D    +E  +E   D+D++                L++G 
Sbjct: 121 VGESIRSNIAPDATTDEQDQDHDRGVEVTVESHLDDDDDHH------------GDLHRGH 180

Query: 181 QYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLR 240
            YWIPTPSQILIGPTQF+CP+CFKTFNRYNNMQMHMWGHGSQYR+GPESLRGTQPTGMLR
Sbjct: 181 HYWIPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLR 240

Query: 241 LPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHE 300
           LPC+CC+PGC+NNIDHPRAKPLKDFRTLQTHYKRKHG KPF CR CGKAFAV+GDWRTHE
Sbjct: 241 LPCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHE 300

Query: 301 KNCGKLWYCICGSDFKHKRSLKDHIKAFGNGH 311
           KNCGKLWYC CGSDFKHKRSLKDH+KAFGNGH
Sbjct: 301 KNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGH 313

[Close]

BLAST of Cp4.1LG08g13880 vs. ExPASy Swiss-Prot
Match: Q9FX68 (Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.8e-81
Identity = 157/264 (59.47%), Postives = 181/264 (68.56%), Query Frame = 0


Query: 52  LLRLSPTRSSQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNASEMATLL 111
           +L L P       H   TS+     D+  NH   N +  VTVALHIG PSS+   +    
Sbjct: 17  VLSLGPPGQQYPSHNKPTSTKPSS-DHEFNHPLTNPN-GVTVALHIGPPSSDKETL---- 76

Query: 112 VSDNNNQNEEEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIG 171
            S  NNQ                        G+T           +GQYWIP+ SQIL+G
Sbjct: 77  -SGGNNQE-----------------------GLT---------ARQGQYWIPSLSQILVG 136

Query: 172 PTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQ-PTGMLRLPCYCCSPGCRN 231
           PTQFSC VC KTFNR+NNMQMHMWGHGSQYR+GPESLRGT+  + +LRLPCYCC+ GC+N
Sbjct: 137 PTQFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKN 196

Query: 232 NIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCR-KCGKAFAVRGDWRTHEKNCGKLWYCIC 291
           NIDHPR+KPLKDFRTLQTHYKRKHG KPF CR KC K FAVRGDWRTHEKNCGKLW+C+C
Sbjct: 197 NIDHPRSKPLKDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVC 241

Query: 292 GSDFKHKRSLKDHIKAFGNGHAAY 314
           GSDFKHKRSLKDH++AFG+GHAA+
Sbjct: 257 GSDFKHKRSLKDHVRAFGDGHAAH 241

[Close]

BLAST of Cp4.1LG08g13880 vs. ExPASy Swiss-Prot
Match: Q8VWG3 (Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana OX=3702 GN=TT1 PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.0e-76
Identity = 148/283 (52.30%), Postives = 184/283 (65.02%), Query Frame = 0


Query: 51  PLLRLSPTRSSQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNASEMATL 110
           PL  +S + SS+     F S       N N+  N+     + +   I L S+       L
Sbjct: 5   PLYEISSSSSSEKPRHHFQSLDLFPNLNQNSCINNTLIEPLPLIDRINLNSNLDLNPNPL 64

Query: 111 LVSDNNNQNEEEDQLEEELEEE------------EDEDEEQQQAGITI----SGFSLSSR 170
              +   + EEE++ + E++ +             D  + +++ G  I    +G  + + 
Sbjct: 65  YAEEGEQEEEEEEEEDREVDVDLHIGLPGFGKPSNDAKQLKKRNGKEIATYDAGKGIENE 124

Query: 171 LNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPT 230
           L+   YWIP P QILIG T FSC VCFKTFNRYNN+QMHMWGHGSQYR+GPESL+GTQP 
Sbjct: 125 LSGKAYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPR 184

Query: 231 GMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDW 290
            ML +PCYCC  GCRN+IDHPR+KPLKDFRTLQTHYKRKHG KPF CR CGK  AV+GDW
Sbjct: 185 AMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDW 244

Query: 291 RTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNSNI 318
           RTHEKNCGK W C+CGSDFKHKRSLKDH+KAFG+GH  Y + +
Sbjct: 245 RTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGSGHGPYPTGL 287

[Close]

BLAST of Cp4.1LG08g13880 vs. NCBI nr
Match: XP_023540357.1 (zinc finger protein WIP2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 726 bits (1874), Expect = 2.81e-264
Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 0


Query: 1   MDDPSTNFFTDLFKFNYPTNFHHHHNPPSSNPPPNFFHAPPSSPPLRQALPLLRLSPTRS 60
           MDDPSTNFFTDLFKFNYPTNFHHHHNPPSSNPPPNFFHAPPSSPPLRQALPLLRLSPTRS
Sbjct: 1   MDDPSTNFFTDLFKFNYPTNFHHHHNPPSSNPPPNFFHAPPSSPPLRQALPLLRLSPTRS 60

Query: 61  SQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQNE 120
           SQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQNE
Sbjct: 61  SQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQNE 120

Query: 121 EEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVC 180
           EEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVC
Sbjct: 121 EEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVC 180

Query: 181 FKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL 240
           FKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL
Sbjct: 181 FKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL 240

Query: 241 KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK 300
           KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK
Sbjct: 241 KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK 300

Query: 301 DHIKAFGNGHAAYNSNINNNCDHRQQQHHHHHHHHHHHHHAFDEEDESAYSEVEEDHD 358
           DHIKAFGNGHAAYNSNINNNCDHRQQQHHHHHHHHHHHHHAFDEEDESAYSEVEEDHD
Sbjct: 301 DHIKAFGNGHAAYNSNINNNCDHRQQQHHHHHHHHHHHHHAFDEEDESAYSEVEEDHD 358

[Close]

BLAST of Cp4.1LG08g13880 vs. NCBI nr
Match: XP_022971296.1 (zinc finger protein WIP2-like [Cucurbita maxima])

HSP 1 Score: 687 bits (1772), Expect = 7.65e-249
Identity = 347/359 (96.66%), Postives = 347/359 (96.66%), Query Frame = 0


Query: 1   MDDPSTNFFTDLFKFNYPTNFHHHH-NPPSSNPPPNFFHAPPSSPPLRQALPLLRLSPTR 60
           MDDPSTNFFTDLFKFNYPTNFHHHH NPPSSNPPPNFFHAPPSSPPLRQALPLLRLSPTR
Sbjct: 1   MDDPSTNFFTDLFKFNYPTNFHHHHHNPPSSNPPPNFFHAPPSSPPLRQALPLLRLSPTR 60

Query: 61  SSQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQN 120
           SSQDHHLSFTSSSAMEIDNNNN  NDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQN
Sbjct: 61  SSQDHHLSFTSSSAMEIDNNNN--NDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQN 120

Query: 121 EEEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPV 180
           EEEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPV
Sbjct: 121 EEEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPV 180

Query: 181 CFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKP 240
           CFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKP
Sbjct: 181 CFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKP 240

Query: 241 LKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSL 300
           LKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSL
Sbjct: 241 LKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSL 300

Query: 301 KDHIKAFGNGHAAYNSNINNNCDHRQQQHHHHHHHHHHHHHAFDEEDESAYSEVEEDHD 358
           KDHIKAFGNGH AYNSNINNN DHRQQQ       HHHHHHAFDEEDESAYSEVEEDHD
Sbjct: 301 KDHIKAFGNGHGAYNSNINNNDDHRQQQ------QHHHHHHAFDEEDESAYSEVEEDHD 351

[Close]

BLAST of Cp4.1LG08g13880 vs. NCBI nr
Match: KAG6596221.1 (Zinc finger protein WIP2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 686 bits (1770), Expect = 1.33e-248
Identity = 344/358 (96.09%), Postives = 345/358 (96.37%), Query Frame = 0


Query: 1   MDDPSTNFFTDLFKFNYPTNFHHHHNPPSSNPPPNFFHAPPSSPPLRQALPLLRLSPTRS 60
           MDDPSTNFFTDLFKFNYPTNFHHHHNPP SNPPPNFFHAPPSSPPLRQALPLLRLSPTRS
Sbjct: 1   MDDPSTNFFTDLFKFNYPTNFHHHHNPPPSNPPPNFFHAPPSSPPLRQALPLLRLSPTRS 60

Query: 61  SQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQNE 120
           S+DHHLSFTSSSAMEIDNNNN  NDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQNE
Sbjct: 61  SKDHHLSFTSSSAMEIDNNNN--NDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQNE 120

Query: 121 EEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVC 180
           EEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVC
Sbjct: 121 EEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVC 180

Query: 181 FKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL 240
           FKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL
Sbjct: 181 FKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL 240

Query: 241 KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK 300
           KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK
Sbjct: 241 KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK 300

Query: 301 DHIKAFGNGHAAYNSNINNNCDHRQQQHHHHHHHHHHHHHAFDEEDESAYSEVEEDHD 358
           DHIKAFGNGHAAYNSNINNN DHRQ         HHHHHHAFDEEDESAYSEVEEDHD
Sbjct: 301 DHIKAFGNGHAAYNSNINNNGDHRQ---------HHHHHHAFDEEDESAYSEVEEDHD 347

[Close]

BLAST of Cp4.1LG08g13880 vs. NCBI nr
Match: XP_022944303.1 (zinc finger protein WIP2-like [Cucurbita moschata])

HSP 1 Score: 685 bits (1768), Expect = 2.58e-248
Identity = 344/358 (96.09%), Postives = 344/358 (96.09%), Query Frame = 0


Query: 1   MDDPSTNFFTDLFKFNYPTNFHHHHNPPSSNPPPNFFHAPPSSPPLRQALPLLRLSPTRS 60
           MDDPSTNFFTDLFKFNYPTNFHHHHNPP SNPPPNFFHAPPSSPPLRQALPLLRLSPTRS
Sbjct: 1   MDDPSTNFFTDLFKFNYPTNFHHHHNPPPSNPPPNFFHAPPSSPPLRQALPLLRLSPTRS 60

Query: 61  SQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQNE 120
           SQDHHLSFTSSSAMEIDNNNN NNDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQNE
Sbjct: 61  SQDHHLSFTSSSAMEIDNNNN-NNDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQNE 120

Query: 121 EEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVC 180
           EEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVC
Sbjct: 121 EEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVC 180

Query: 181 FKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL 240
           FKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL
Sbjct: 181 FKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL 240

Query: 241 KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK 300
           KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK
Sbjct: 241 KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK 300

Query: 301 DHIKAFGNGHAAYNSNINNNCDHRQQQHHHHHHHHHHHHHAFDEEDESAYSEVEEDHD 358
           DHIKAFGNGHAAYNSNINNN DHRQ           HHHHAFDEEDESAYSEVEEDHD
Sbjct: 301 DHIKAFGNGHAAYNSNINNNGDHRQ-----------HHHHAFDEEDESAYSEVEEDHD 346

[Close]

BLAST of Cp4.1LG08g13880 vs. NCBI nr
Match: KAG7027761.1 (Zinc finger protein WIP2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 681 bits (1757), Expect = 1.27e-246
Identity = 342/358 (95.53%), Postives = 344/358 (96.09%), Query Frame = 0


Query: 1   MDDPSTNFFTDLFKFNYPTNFHHHHNPPSSNPPPNFFHAPPSSPPLRQALPLLRLSPTRS 60
           MDDPSTNFFTDLFKFNYPTNFHHHHNPP SNPPPNFFHAPPSSPPLRQALPLLRLSPTRS
Sbjct: 1   MDDPSTNFFTDLFKFNYPTNFHHHHNPPPSNPPPNFFHAPPSSPPLRQALPLLRLSPTRS 60

Query: 61  SQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQNE 120
           S+DHHLSFTSSSAMEIDNNNN  ND+EDVSVTVALHIGLPSSNASEMATLLVSDNNNQNE
Sbjct: 61  SKDHHLSFTSSSAMEIDNNNN--NDDEDVSVTVALHIGLPSSNASEMATLLVSDNNNQNE 120

Query: 121 EEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVC 180
           EEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVC
Sbjct: 121 EEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVC 180

Query: 181 FKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL 240
           FKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL
Sbjct: 181 FKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL 240

Query: 241 KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK 300
           KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK
Sbjct: 241 KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK 300

Query: 301 DHIKAFGNGHAAYNSNINNNCDHRQQQHHHHHHHHHHHHHAFDEEDESAYSEVEEDHD 358
           DHIKAFGNGHAAYNSNINNN DHRQ         HHHHHHAFDEEDESAYSEVEED D
Sbjct: 301 DHIKAFGNGHAAYNSNINNNGDHRQ---------HHHHHHAFDEEDESAYSEVEEDRD 347

[Close]

BLAST of Cp4.1LG08g13880 vs. ExPASy TrEMBL
Match: A0A6J1I2Y3 (zinc finger protein WIP2-like OS=Cucurbita maxima OX=3661 GN=LOC111470055 PE=3 SV=1)

HSP 1 Score: 687 bits (1772), Expect = 3.70e-249
Identity = 347/359 (96.66%), Postives = 347/359 (96.66%), Query Frame = 0


Query: 1   MDDPSTNFFTDLFKFNYPTNFHHHH-NPPSSNPPPNFFHAPPSSPPLRQALPLLRLSPTR 60
           MDDPSTNFFTDLFKFNYPTNFHHHH NPPSSNPPPNFFHAPPSSPPLRQALPLLRLSPTR
Sbjct: 1   MDDPSTNFFTDLFKFNYPTNFHHHHHNPPSSNPPPNFFHAPPSSPPLRQALPLLRLSPTR 60

Query: 61  SSQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQN 120
           SSQDHHLSFTSSSAMEIDNNNN  NDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQN
Sbjct: 61  SSQDHHLSFTSSSAMEIDNNNN--NDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQN 120

Query: 121 EEEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPV 180
           EEEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPV
Sbjct: 121 EEEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPV 180

Query: 181 CFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKP 240
           CFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKP
Sbjct: 181 CFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKP 240

Query: 241 LKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSL 300
           LKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSL
Sbjct: 241 LKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSL 300

Query: 301 KDHIKAFGNGHAAYNSNINNNCDHRQQQHHHHHHHHHHHHHAFDEEDESAYSEVEEDHD 358
           KDHIKAFGNGH AYNSNINNN DHRQQQ       HHHHHHAFDEEDESAYSEVEEDHD
Sbjct: 301 KDHIKAFGNGHGAYNSNINNNDDHRQQQ------QHHHHHHAFDEEDESAYSEVEEDHD 351

[Close]

BLAST of Cp4.1LG08g13880 vs. ExPASy TrEMBL
Match: A0A6J1FXX4 (zinc finger protein WIP2-like OS=Cucurbita moschata OX=3662 GN=LOC111448785 PE=3 SV=1)

HSP 1 Score: 685 bits (1768), Expect = 1.25e-248
Identity = 344/358 (96.09%), Postives = 344/358 (96.09%), Query Frame = 0


Query: 1   MDDPSTNFFTDLFKFNYPTNFHHHHNPPSSNPPPNFFHAPPSSPPLRQALPLLRLSPTRS 60
           MDDPSTNFFTDLFKFNYPTNFHHHHNPP SNPPPNFFHAPPSSPPLRQALPLLRLSPTRS
Sbjct: 1   MDDPSTNFFTDLFKFNYPTNFHHHHNPPPSNPPPNFFHAPPSSPPLRQALPLLRLSPTRS 60

Query: 61  SQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQNE 120
           SQDHHLSFTSSSAMEIDNNNN NNDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQNE
Sbjct: 61  SQDHHLSFTSSSAMEIDNNNN-NNDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQNE 120

Query: 121 EEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVC 180
           EEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVC
Sbjct: 121 EEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVC 180

Query: 181 FKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL 240
           FKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL
Sbjct: 181 FKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL 240

Query: 241 KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK 300
           KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK
Sbjct: 241 KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK 300

Query: 301 DHIKAFGNGHAAYNSNINNNCDHRQQQHHHHHHHHHHHHHAFDEEDESAYSEVEEDHD 358
           DHIKAFGNGHAAYNSNINNN DHRQ           HHHHAFDEEDESAYSEVEEDHD
Sbjct: 301 DHIKAFGNGHAAYNSNINNNGDHRQ-----------HHHHAFDEEDESAYSEVEEDHD 346

[Close]

BLAST of Cp4.1LG08g13880 vs. ExPASy TrEMBL
Match: A0A6J1F387 (zinc finger protein WIP2-like OS=Cucurbita moschata OX=3662 GN=LOC111441785 PE=3 SV=1)

HSP 1 Score: 520 bits (1339), Expect = 3.57e-183
Identity = 283/371 (76.28%), Postives = 303/371 (81.67%), Query Frame = 0


Query: 1   MDDPSTNFFTDLFKFN-YPTNFHHHHNPPSSNPPPNFF----HAPPSSPPLRQALPLLRL 60
           MDDPSTNFFT+LFKFN  P N H    PP   PPP F     HAPPSSPPLRQALPLLRL
Sbjct: 1   MDDPSTNFFTNLFKFNPSPPNPH----PPPPPPPPYFLPTHPHAPPSSPPLRQALPLLRL 60

Query: 61  SPTRSSQDHH------LSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNASEMAT 120
           SPTRSSQ+++       S +SSSA    N          VSVTVALHIGLPS +ASEMAT
Sbjct: 61  SPTRSSQNNNPQQNFSSSSSSSSATAAAN----------VSVTVALHIGLPSPSASEMAT 120

Query: 121 LLVSDNNNQNEEEDQLEEELEEEEDEDEEQQQAGITISGFSLS-SRLNKGQYWIPTPSQI 180
           LL+S N NQ EE++  ++E  EE + +EE+++    ISG  LS SRLNKGQYWIPTPSQI
Sbjct: 121 LLLSSNQNQEEEDEDEDDEEHEEHELEEEEEEEVAAISGLCLSNSRLNKGQYWIPTPSQI 180

Query: 181 LIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGC 240
           LIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGC
Sbjct: 181 LIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGC 240

Query: 241 RNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCI 300
           RNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCI
Sbjct: 241 RNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCI 300

Query: 301 CGSDFKHKRSLKDHIKAFGNGHAAYN-SNINNNCDHRQQQHHHHHHHHHHHHHAFDEEDE 358
           CGSDFKHKRSLKDHIKAFGNGHAAYN SN NNN DHR +    HHHH HH HH FDEE++
Sbjct: 301 CGSDFKHKRSLKDHIKAFGNGHAAYNNSNANNNPDHRHR----HHHHCHHRHHRFDEEED 353

[Close]

BLAST of Cp4.1LG08g13880 vs. ExPASy TrEMBL
Match: A0A6J1IY47 (zinc finger protein WIP2-like OS=Cucurbita maxima OX=3661 GN=LOC111481686 PE=3 SV=1)

HSP 1 Score: 512 bits (1319), Expect = 3.54e-180
Identity = 285/373 (76.41%), Postives = 299/373 (80.16%), Query Frame = 0


Query: 1   MDDPSTNFFTDLFKFN-YPTNFHHHHNPPSSNPP---PNFFHAPPSSPPLRQALPLLRLS 60
           MDDPSTNFF +LFKFN  P N H    PP   PP   P   HAPPSSPPLRQALPLLRLS
Sbjct: 1   MDDPSTNFFKNLFKFNPSPPNPH----PPPPPPPYFLPTHLHAPPSSPPLRQALPLLRLS 60

Query: 61  PTRSSQDHHL------SFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNASEMATL 120
           PTRSSQ+++       S +SSSA    N          VSVTVALHIGLPS +ASEMATL
Sbjct: 61  PTRSSQNNNAPQNFSSSSSSSSAAAAAN----------VSVTVALHIGLPSPSASEMATL 120

Query: 121 LVSDNNNQNEE---EDQLEEELEEEEDEDEEQQQAGITISGFSLS-SRLNKGQYWIPTPS 180
           L+S N NQ EE   ED  E ELEEEE+E+E        ISG  LS SRLNKGQYWIPTPS
Sbjct: 121 LLSSNQNQEEEDEDEDDDEHELEEEEEEEE-----VAAISGLCLSNSRLNKGQYWIPTPS 180

Query: 181 QILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSP 240
           QILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSP
Sbjct: 181 QILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSP 240

Query: 241 GCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWY 300
           GCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWY
Sbjct: 241 GCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWY 300

Query: 301 CICGSDFKHKRSLKDHIKAFGNGHAAYN-SNINNNCDHRQQQHHHHHHHHHHHHHAFDEE 358
           CICGSDFKHKRSLKDHIKAFGNGHAAYN SN NNN DHR +    HHH HHH HH  DE+
Sbjct: 301 CICGSDFKHKRSLKDHIKAFGNGHAAYNNSNANNNPDHRHR----HHHCHHHRHHGIDED 350

[Close]

BLAST of Cp4.1LG08g13880 vs. ExPASy TrEMBL
Match: A0A0A0LEJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G810580 PE=3 SV=1)

HSP 1 Score: 465 bits (1197), Expect = 1.42e-161
Identity = 263/385 (68.31%), Postives = 286/385 (74.29%), Query Frame = 0


Query: 1   MDDPSTNFF-TDLFKFNYPTNFHHHHNPPSSN----------PPPNFF----HAPP--SS 60
           MDDPSTNFF T+LFKFN PT    H +  SS+          PPPNFF    HAPP  SS
Sbjct: 1   MDDPSTNFFFTNLFKFNSPTTTSFHPSSSSSSSDPLRLPPPPPPPNFFPTFHHAPPPPSS 60

Query: 61  PPLRQALPLLRLSPTRSSQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSN 120
           PPLRQALPLLRLSPTRSS        +++  E+D+      + E+  + VALHIGLPS  
Sbjct: 61  PPLRQALPLLRLSPTRSSSQE----KNNNIKELDD------EKEETLMRVALHIGLPSPR 120

Query: 121 ASEMATLLVSDNNNQNEEEDQLEEELEEEEDEDEEQQQAGITISGFSLS-SRLNKGQYWI 180
             E+      D   + EEE++LEE LEEEE+E+       + ISG  LS SRLNKGQYWI
Sbjct: 121 DQEIEDEEEEDQEIEYEEEEELEE-LEEEEEEE-------VAISGLCLSNSRLNKGQYWI 180

Query: 181 PTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCY 240
           PTPSQILIGPTQFSCPVC+KTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCY
Sbjct: 181 PTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCY 240

Query: 241 CCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCG 300
           CCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCG
Sbjct: 241 CCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCG 300

Query: 301 KLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNSNINNN--------CDHRQQQHHHHHHH 358
           KLWYCICGSDFKHKRSLKDHIKAFGNGHAAYN N NNN          HR+Q+       
Sbjct: 301 KLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNHNHNNNNPDLHLHRLHHRRQR------- 353

[Close]

BLAST of Cp4.1LG08g13880 vs. TAIR 10
Match: AT3G57670.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 429.9 bits (1104), Expect = 2.0e-120
Identity = 239/406 (58.87%), Postives = 272/406 (67.00%), Query Frame = 0


Query: 1   MDDPSTNFFTDLFKFNYPTNFHHH---------HNPPSSNPPPNFFH------------- 60
           M DP +NFFTD FK N    FHH+         H  P   PP +FF              
Sbjct: 1   MTDPYSNFFTDWFKSN---PFHHYPNSSTNPSPHPLPPVTPPSSFFFFPQSGDLRRPPPP 60

Query: 61  -APPSSPPLRQALPLLRLSPTRSSQDHH------LSFTSSSAMEID-----NNNNHNNDN 120
             PP SPPLR+ALPLL LSP    QDHH      +    S++M++D      +++HN D+
Sbjct: 61  PTPPPSPPLREALPLLSLSPANKQQDHHHNHDHLIQEPPSTSMDVDYDHHHQDDHHNLDD 120

Query: 121 EDVSVTVALHIGLPSSNASEMATLLVSDNNNQNEEEDQLEEELEEEEDED---------- 180
           +D  VTVALHIGLPS +A EMA+LL+  +++ +       E++  ++D D          
Sbjct: 121 DDHDVTVALHIGLPSPSAQEMASLLMMSSSSSSSRTTHHHEDMNHKKDLDHEYSHGAVGG 180

Query: 181 -EEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW 240
            E+  +  +   G    SRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW
Sbjct: 181 GEDDDEDSVGGDGGCRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW 240

Query: 241 GHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHG 300
           GHGSQYR+GPESLRGTQPTGMLRLPCYCC+PGCRNNIDHPRAKPLKDFRTLQTHYKRKHG
Sbjct: 241 GHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHG 300

Query: 301 IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNS 359
           IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGH AY  
Sbjct: 301 IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGI 360

[Close]

BLAST of Cp4.1LG08g13880 vs. TAIR 10
Match: AT3G20880.1 (WIP domain protein 4 )

HSP 1 Score: 347.8 bits (891), Expect = 1.0e-95
Identity = 182/318 (57.23%), Postives = 223/318 (70.13%), Query Frame = 0


Query: 5   STNFFTDLFK-FNYPTNFHHHHNP--PSSNPPPNFFHAPPSSPPLRQALPLLRLSPTRSS 64
           S N+ T L + +N   +F++ H    P+ N  PN     P SPPLR+ALPLL LSP    
Sbjct: 83  SFNYATSLSRIYNSHDSFYYPHQTTNPNINENPNL--TSPDSPPLREALPLLSLSPIHKH 142

Query: 65  QD---HHLSFTSSSAMEIDNNNNHNNDNEDV---SVTVALHIGLPS---SNASEMATLLV 124
           Q+   +H  +      E  +N+N  +  +D     VTV LH+GLP+     +S    +L 
Sbjct: 143 QEPTANHHEYYFMETTETSSNSNFLDQCQDSYRHDVTVDLHLGLPNLGDGGSSSSDVVLD 202

Query: 125 SDNNNQNEEEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGP 184
           S ++ +   +   ++ LE     D + +  G       L    +   +WIPTPSQIL+GP
Sbjct: 203 STDHQEGHHDHHQDQGLEVTMASDHDDEHGG-------LQRGNHLHHFWIPTPSQILMGP 262

Query: 185 TQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNI 244
           TQFSCP+CFKTFNRYNNMQMHMWGHGSQYR+GPESLRGTQPT ML+LPCYCC+PGC+NNI
Sbjct: 263 TQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGCKNNI 322

Query: 245 DHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSD 304
           DHPRA+PLKDFRTLQTHYKRKHG++PF CR+CGKAFAV+GDWRTHEKNCGKLWYC CGSD
Sbjct: 323 DHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSD 382

Query: 305 FKHKRSLKDHIKAFGNGH 311
           FKHKRSLKDH+KAFGNGH
Sbjct: 383 FKHKRSLKDHVKAFGNGH 391

[Close]

BLAST of Cp4.1LG08g13880 vs. TAIR 10
Match: AT1G51220.1 (WIP domain protein 5 )

HSP 1 Score: 345.1 bits (884), Expect = 6.6e-95
Identity = 189/332 (56.93%), Postives = 228/332 (68.67%), Query Frame = 0


Query: 1   MDDPS-TNFFT---DLFKFNYPTNFHHHHNPP-----SSNPPPNFFH------APPSSPP 60
           M +P+ +N F    D   FNY T+  + +N       S+   PN+ +        P+SPP
Sbjct: 1   MSNPACSNLFNNGCDHNSFNYSTSLSYIYNSHGSYYYSNTTNPNYINHTHTTSTSPNSPP 60

Query: 61  LRQALPLLRLSPTR--SSQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSN 120
           LR+ALPLL LSP R    QD H    +       +  + +N  +D  VTV LH+GLP+  
Sbjct: 61  LREALPLLSLSPIRHQEQQDQHYFMDT-------HQISSSNFLDDPLVTVDLHLGLPNYG 120

Query: 121 ASE-MATLLVSDNNNQNEEEDQ---LEEELEEEEDEDEEQQQAGITISGFSLSSRLNKG- 180
             E + + +  D     +++D    +E  +E   D+D++                L++G 
Sbjct: 121 VGESIRSNIAPDATTDEQDQDHDRGVEVTVESHLDDDDDHH------------GDLHRGH 180

Query: 181 QYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLR 240
            YWIPTPSQILIGPTQF+CP+CFKTFNRYNNMQMHMWGHGSQYR+GPESLRGTQPTGMLR
Sbjct: 181 HYWIPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLR 240

Query: 241 LPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHE 300
           LPC+CC+PGC+NNIDHPRAKPLKDFRTLQTHYKRKHG KPF CR CGKAFAV+GDWRTHE
Sbjct: 241 LPCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHE 300

Query: 301 KNCGKLWYCICGSDFKHKRSLKDHIKAFGNGH 311
           KNCGKLWYC CGSDFKHKRSLKDH+KAFGNGH
Sbjct: 301 KNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGH 313

[Close]

BLAST of Cp4.1LG08g13880 vs. TAIR 10
Match: AT1G13290.1 (C2H2-like zinc finger protein )

HSP 1 Score: 304.3 bits (778), Expect = 1.3e-82
Identity = 157/264 (59.47%), Postives = 181/264 (68.56%), Query Frame = 0


Query: 52  LLRLSPTRSSQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNASEMATLL 111
           +L L P       H   TS+     D+  NH   N +  VTVALHIG PSS+   +    
Sbjct: 17  VLSLGPPGQQYPSHNKPTSTKPSS-DHEFNHPLTNPN-GVTVALHIGPPSSDKETL---- 76

Query: 112 VSDNNNQNEEEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIG 171
            S  NNQ                        G+T           +GQYWIP+ SQIL+G
Sbjct: 77  -SGGNNQE-----------------------GLT---------ARQGQYWIPSLSQILVG 136

Query: 172 PTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQ-PTGMLRLPCYCCSPGCRN 231
           PTQFSC VC KTFNR+NNMQMHMWGHGSQYR+GPESLRGT+  + +LRLPCYCC+ GC+N
Sbjct: 137 PTQFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKN 196

Query: 232 NIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCR-KCGKAFAVRGDWRTHEKNCGKLWYCIC 291
           NIDHPR+KPLKDFRTLQTHYKRKHG KPF CR KC K FAVRGDWRTHEKNCGKLW+C+C
Sbjct: 197 NIDHPRSKPLKDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVC 241

Query: 292 GSDFKHKRSLKDHIKAFGNGHAAY 314
           GSDFKHKRSLKDH++AFG+GHAA+
Sbjct: 257 GSDFKHKRSLKDHVRAFGDGHAAH 241

[Close]

BLAST of Cp4.1LG08g13880 vs. TAIR 10
Match: AT1G34790.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 287.0 bits (733), Expect = 2.1e-77
Identity = 148/283 (52.30%), Postives = 184/283 (65.02%), Query Frame = 0


Query: 51  PLLRLSPTRSSQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNASEMATL 110
           PL  +S + SS+     F S       N N+  N+     + +   I L S+       L
Sbjct: 5   PLYEISSSSSSEKPRHHFQSLDLFPNLNQNSCINNTLIEPLPLIDRINLNSNLDLNPNPL 64

Query: 111 LVSDNNNQNEEEDQLEEELEEE------------EDEDEEQQQAGITI----SGFSLSSR 170
              +   + EEE++ + E++ +             D  + +++ G  I    +G  + + 
Sbjct: 65  YAEEGEQEEEEEEEEDREVDVDLHIGLPGFGKPSNDAKQLKKRNGKEIATYDAGKGIENE 124

Query: 171 LNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPT 230
           L+   YWIP P QILIG T FSC VCFKTFNRYNN+QMHMWGHGSQYR+GPESL+GTQP 
Sbjct: 125 LSGKAYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPR 184

Query: 231 GMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDW 290
            ML +PCYCC  GCRN+IDHPR+KPLKDFRTLQTHYKRKHG KPF CR CGK  AV+GDW
Sbjct: 185 AMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDW 244

Query: 291 RTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNSNI 318
           RTHEKNCGK W C+CGSDFKHKRSLKDH+KAFG+GH  Y + +
Sbjct: 245 RTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGSGHGPYPTGL 287

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g13880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVY1	2.9e-119	58.87	Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1	[more]
Q8W030	1.4e-94	57.23	Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1	[more]
Q8W031	9.3e-94	56.93	Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1	[more]
Q9FX68	1.8e-81	59.47	Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1	[more]
Q8VWG3	3.0e-76	52.30	Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana OX=3702 GN=TT1 PE=1 SV=1	[more]

BLAST of Cp4.1LG08g13880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540357.1	2.81e-264	100.00	zinc finger protein WIP2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971296.1	7.65e-249	96.66	zinc finger protein WIP2-like [Cucurbita maxima]	[more]
KAG6596221.1	1.33e-248	96.09	Zinc finger protein WIP2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022944303.1	2.58e-248	96.09	zinc finger protein WIP2-like [Cucurbita moschata]	[more]
KAG7027761.1	1.27e-246	95.53	Zinc finger protein WIP2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG08g13880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I2Y3	3.70e-249	96.66	zinc finger protein WIP2-like OS=Cucurbita maxima OX=3661 GN=LOC111470055 PE=3 S...	[more]
A0A6J1FXX4	1.25e-248	96.09	zinc finger protein WIP2-like OS=Cucurbita moschata OX=3662 GN=LOC111448785 PE=3...	[more]
A0A6J1F387	3.57e-183	76.28	zinc finger protein WIP2-like OS=Cucurbita moschata OX=3662 GN=LOC111441785 PE=3...	[more]
A0A6J1IY47	3.54e-180	76.41	zinc finger protein WIP2-like OS=Cucurbita maxima OX=3661 GN=LOC111481686 PE=3 S...	[more]
A0A0A0LEJ3	1.42e-161	68.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G810580 PE=3 SV=1	[more]

BLAST of Cp4.1LG08g13880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57670.1	2.0e-120	58.87	C2H2-type zinc finger family protein	[more]
AT3G20880.1	1.0e-95	57.23	WIP domain protein 4	[more]
AT1G51220.1	6.6e-95	56.93	WIP domain protein 5	[more]
AT1G13290.1	1.3e-82	59.47	C2H2-like zinc finger protein	[more]
AT1G34790.1	2.1e-77	52.30	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 108..142
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 218..305 e-value: 3.2E-6 score: 29.2
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 174..197 e-value: 1.4E-5 score: 26.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..358
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..47
None	No IPR available	PANTHER	PTHR45878:SF31	ZINC FINGER PROTEIN WIP2-LIKE	coord: 22..317
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 175..197 e-value: 0.38 score: 19.8 coord: 259..279 e-value: 49.0 score: 7.1
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 177..197
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 175..202 score: 9.639517
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 259..279 score: 8.808193
IPR043584	Zinc finger protein WIP	PANTHER	PTHR45878	ZINC FINGER PROTEIN WIP2	coord: 22..317
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 241..279

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g13880.1	Cp4.1LG08g13880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001709	cell fate determination
biological_process	GO:1990058	fruit replum development
biological_process	GO:0009860	pollen tube growth
biological_process	GO:0080022	primary root development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010500	transmitting tissue development
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity