Cp4.1LG08g13760 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g13760
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	WUSCHEL-related homeobox 11-like
Location	Cp4.1LG08: 9902855 .. 9903650 (-)
RNA-Seq Expression	Cp4.1LG08g13760
Synteny	Cp4.1LG08g13760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCAATGTTTTCTACTGGTTTCAAAACCGCCGCTCTCGGTCTCGCCGCCGCCAACGCCAGCTGCAGGCAGCTGCAACCCACCAAGGTGGCAGTGCAATTCATTATGACAGTGGTTGTAGCGGTGGCAGTGTCATGAATTTTGCTCCTTCCTCTTCTTACCTTGGAGAAGGAGGCTCCTCCTCCTCCGGCGGCGGCGGCGGCGGTTTTTCGATGACCGATCACATGGGTATCTCTGAAATTGATCAGCCGATGGTTGTAACCCCCTCGTTTTGCCCTTCAGCAACCTCGAATTTAGAGTTCCAATCAGGTATGGGTATGCATGTTGGTTCAAACCCTCATTTTATTTCACCAAAATATCCAAAAAAAACACCAAAAAAAGGGTTTTTGATGAAGACCCAATAATCAAAATGGATGGAATATAGTAAATTTAGCAACTTTTTTTGATTCAGCTTTTTGAAGAGAGTTCCAATGAATTGTTCTCCTTTTGATGATGATGTGACAGTTCTTTCTTGAGCTGCAATTTTTTTAACACTAATAACATAAAAAAACGTTTGCTTTGAATTATTTGAATTGATTCACGGGTTTGAGCATTAAATTTTGTGTAAAAATGTTTGATTTTGAAGGTTATATTATAATATTCATAAATGGAGTTCCGACAGAAGTGCCAAAAGGAGCGGTGGACATGAAGGCAATGTTTGGGGATGACACAGTGTTGGTTCACTCCTCAGGACTCCCAGTTCTTACCAATGAATTTGGAATATCACTGCACAGTTTGCAGCATGGTGAAACCTACTTT

mRNA sequence

GCCAATGTTTTCTACTGGTTTCAAAACCGCCGCTCTCGGTCTCGCCGCCGCCAACGCCAGCTGCAGGCAGCTGCAACCCACCAAGGTGGCAGTGCAATTCATTATGACAGTGGTTGTAGCGGTGGCAGTGTCATGAATTTTGCTCCTTCCTCTTCTTACCTTGGAGAAGGAGGCTCCTCCTCCTCCGGCGGCGGCGGCGGCGGTTTTTCGATGACCGATCACATGGGTATCTCTGAAATTGATCAGCCGATGGTTGTAACCCCCTCGTTTTGCCCTTCAGCAACCTCGAATTTAGAGTTCCAATCAGGTTATATTATAATATTCATAAATGGAGTTCCGACAGAAGTGCCAAAAGGAGCGGTGGACATGAAGGCAATGTTTGGGGATGACACAGTGTTGGTTCACTCCTCAGGACTCCCAGTTCTTACCAATGAATTTGGAATATCACTGCACAGTTTGCAGCATGGTGAAACCTACTTT

Coding sequence (CDS)

GCCAATGTTTTCTACTGGTTTCAAAACCGCCGCTCTCGGTCTCGCCGCCGCCAACGCCAGCTGCAGGCAGCTGCAACCCACCAAGGTGGCAGTGCAATTCATTATGACAGTGGTTGTAGCGGTGGCAGTGTCATGAATTTTGCTCCTTCCTCTTCTTACCTTGGAGAAGGAGGCTCCTCCTCCTCCGGCGGCGGCGGCGGCGGTTTTTCGATGACCGATCACATGGGTATCTCTGAAATTGATCAGCCGATGGTTGTAACCCCCTCGTTTTGCCCTTCAGCAACCTCGAATTTAGAGTTCCAATCAGGTTATATTATAATATTCATAAATGGAGTTCCGACAGAAGTGCCAAAAGGAGCGGTGGACATGAAGGCAATGTTTGGGGATGACACAGTGTTGGTTCACTCCTCAGGACTCCCAGTTCTTACCAATGAATTTGGAATATCACTGCACAGTTTGCAGCATGGTGAAACCTACTTT

Protein sequence

ANVFYWFQNRRSRSRRRQRQLQAAATHQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSSSSGGGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPTEVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF

Homology

[Close]

BLAST of Cp4.1LG08g13760 vs. ExPASy Swiss-Prot
Match: Q6X7J3 (WUSCHEL-related homeobox 11 OS=Arabidopsis thaliana OX=3702 GN=WOX11 PE=2 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 7.0e-33
Identity = 92/188 (48.94%), Postives = 108/188 (57.45%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAAT--------------------HQGGSAIHYDSGCS 60
           ANVFYWFQNRRSRSRRRQRQLQAAA                     H  GS + +  GCS
Sbjct: 76  ANVFYWFQNRRSRSRRRQRQLQAAAAAADATTNTCDQTMMVSNSLPHHSGSDLGF-GGCS 135

Query: 61  GGSVMNFAPSSSYLGEGGSSSSGGGGGG-FSMTDHMGISEI------DQPMVVTPSFCPS 120
             S   FA SSS  G G  + S  G     +M+  M   E       +    VT   CPS
Sbjct: 136 TSSNYLFASSSSSYGGGCDNQSNSGMENLLTMSGQMSYHEATHHHYQNHSSNVTSILCPS 195

Query: 121 -ATSNLEFQSGYIIIFINGVPTEVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHS 161
              SN ++Q G I +FINGVPTEV +G +DMKA FG+D VLVHSSG+P+ T+EFG  +HS
Sbjct: 196 DQNSNFQYQQGAITVFINGVPTEVTRGGIDMKATFGEDLVLVHSSGVPLPTDEFGFLMHS 255

[Close]

BLAST of Cp4.1LG08g13760 vs. ExPASy Swiss-Prot
Match: Q8GY25 (WUSCHEL-related homeobox 12 OS=Arabidopsis thaliana OX=3702 GN=WOX12 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.7e-26
Identity = 89/202 (44.06%), Postives = 107/202 (52.97%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAAT------------HQGGSAIH--------YDSG-- 60
           ANVFYWFQNRRSRSRRR RQL AA T            H    ++H         D G  
Sbjct: 64  ANVFYWFQNRRSRSRRRHRQLLAATTAAATSIGAEDHQHMTAMSMHQYPCSNNEIDLGFG 123

Query: 61  -CSGGSVMNFAPSSS-------YLG----EGGSSSSGGGGGGFSMTDHMGISEIDQ---- 120
            CS  S   F   SS       +LG     GG  ++ G    F M  H       Q    
Sbjct: 124 SCSNLSANYFLNGSSSSQIPSFFLGLSSSSGGCENNNGMENLFKMYGHESDHNHQQQHHS 183

Query: 121 ---PMVVTPSFCPSATSNLEF-QSGYIIIFINGVPTEVPKGAVDMKAMFGDDTVLVHSSG 161
                V+ PS      SN ++ Q G++ +FINGVP EV KGA+DMK MFGDD+VL+HSSG
Sbjct: 184 SNAASVLNPS---DQNSNSQYEQEGFMTVFINGVPMEVTKGAIDMKTMFGDDSVLLHSSG 243

[Close]

BLAST of Cp4.1LG08g13760 vs. ExPASy Swiss-Prot
Match: B8B644 (WUSCHEL-related homeobox 11 OS=Oryza sativa subsp. indica OX=39946 GN=WOX11 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.6e-21
Identity = 74/192 (38.54%), Postives = 97/192 (50.52%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAA-------------THQGGSAIHYDSGCSGGSVMNF 60
           ANVFYWFQNRRSRSRRRQRQLQA A             T   G      +G    S+  F
Sbjct: 65  ANVFYWFQNRRSRSRRRQRQLQAQAQAAAAAASSGSPPTASSGGLAPGHAGSPASSLGMF 124

Query: 61  APSSSYLGEGGSSS-----------------SGGGGGGFSMTDHMGISEIDQPMVVTPSF 120
           A  ++      SSS                  GGG   F+++  MG  +       + + 
Sbjct: 125 AHGAAGYSSSSSSSWPSSPPSVGMMMGDVDYGGGGDDLFAISRQMGYMDGGGGSSSSAAA 184

Query: 121 CPSATSNLEF--QSGYIIIFINGVPTEVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGI 161
                  L +  Q   + +FINGV TEVP+G +D+++MFG D +LVHS+G  +  NE+GI
Sbjct: 185 GQHQQQQLYYSCQPATMTVFINGVATEVPRGPIDLRSMFGQDVMLVHSTGALLPANEYGI 244

[Close]

BLAST of Cp4.1LG08g13760 vs. ExPASy Swiss-Prot
Match: Q0D3I7 (WUSCHEL-related homeobox 11 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX11 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.6e-21
Identity = 74/192 (38.54%), Postives = 97/192 (50.52%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAA-------------THQGGSAIHYDSGCSGGSVMNF 60
           ANVFYWFQNRRSRSRRRQRQLQA A             T   G      +G    S+  F
Sbjct: 65  ANVFYWFQNRRSRSRRRQRQLQAQAQAAAAAASSGSPPTASSGGLAPGHAGSPASSLGMF 124

Query: 61  APSSSYLGEGGSSS-----------------SGGGGGGFSMTDHMGISEIDQPMVVTPSF 120
           A  ++      SSS                  GGG   F+++  MG  +       + + 
Sbjct: 125 AHGAAGYSSSSSSSWPSSPPSVGMMMGDVDYGGGGDDLFAISRQMGYMDGGGGSSSSAAA 184

Query: 121 CPSATSNLEF--QSGYIIIFINGVPTEVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGI 161
                  L +  Q   + +FINGV TEVP+G +D+++MFG D +LVHS+G  +  NE+GI
Sbjct: 185 GQHQQQQLYYSCQPATMTVFINGVATEVPRGPIDLRSMFGQDVMLVHSTGALLPANEYGI 244

[Close]

BLAST of Cp4.1LG08g13760 vs. ExPASy Swiss-Prot
Match: A2XG77 (WUSCHEL-related homeobox 6 OS=Oryza sativa subsp. indica OX=39946 GN=WOX6 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-19
Identity = 84/240 (35.00%), Postives = 110/240 (45.83%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAAT---------------------------------- 60
           ANVFYWFQNRRSRSRRRQRQ+QAAA                                   
Sbjct: 85  ANVFYWFQNRRSRSRRRQRQMQAAAAAAAAAASSSSPSANTSPAAASAATVQVGLPPVAV 144

Query: 61  ----HQGGSAIHYD--------SGCSGGSVMN-FAPSSSYLGEGG------------SSS 120
                 GGSA  Y+        SG +GGS +  FA  +   G GG            SS+
Sbjct: 145 VHTMAMGGSACQYEQQASSSSSSGSTGGSSLGLFAHGAGASGAGGYLQASCGASASASSA 204

Query: 121 -----------SGGGGGGFSMTDHMGI------SEIDQPMVVTPSFCPSATS----NLEF 161
                      SGG    F+++  MG       S    P   TPS   +A      + + 
Sbjct: 205 LAPGLMGDVVDSGGSDDLFAISRQMGFVGSPRCSPASSP--ATPSSAATAAQQQFYSCQL 264

[Close]

BLAST of Cp4.1LG08g13760 vs. NCBI nr
Match: XP_023540920.1 (WUSCHEL-related homeobox 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316 bits (809), Expect = 1.87e-107
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAATHQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSS 60
           ANVFYWFQNRRSRSRRRQRQLQAAATHQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSS
Sbjct: 67  ANVFYWFQNRRSRSRRRQRQLQAAATHQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSS 126

Query: 61  SSGGGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPTEVPKGA 120
           SSGGGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPTEVPKGA
Sbjct: 127 SSGGGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPTEVPKGA 186

Query: 121 VDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF 160
           VDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF
Sbjct: 187 VDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF 226

[Close]

BLAST of Cp4.1LG08g13760 vs. NCBI nr
Match: XP_022946378.1 (WUSCHEL-related homeobox 11-like [Cucurbita moschata])

HSP 1 Score: 306 bits (784), Expect = 1.12e-103
Identity = 157/160 (98.12%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAATHQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSS 60
           ANVFYWFQNRRSRSRRRQRQLQAAA+HQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSS
Sbjct: 67  ANVFYWFQNRRSRSRRRQRQLQAAASHQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSS 126

Query: 61  SSGGGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPTEVPKGA 120
           SSGG  GGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPTEVPKGA
Sbjct: 127 SSGG--GGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPTEVPKGA 186

Query: 121 VDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF 160
           VDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF
Sbjct: 187 VDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF 224

[Close]

BLAST of Cp4.1LG08g13760 vs. NCBI nr
Match: XP_022971585.1 (WUSCHEL-related homeobox 11-like [Cucurbita maxima])

HSP 1 Score: 305 bits (782), Expect = 2.98e-103
Identity = 158/166 (95.18%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAATHQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSS 60
           ANVFYWFQNRRSRSRRRQRQLQAAATHQGGSAIHYDSGC GGSVMNFAPSSSYLGEGGSS
Sbjct: 67  ANVFYWFQNRRSRSRRRQRQLQAAATHQGGSAIHYDSGCGGGSVMNFAPSSSYLGEGGSS 126

Query: 61  SSG------GGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPT 120
           SS       GGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPT
Sbjct: 127 SSSSSASASGGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPT 186

Query: 121 EVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF 160
           EVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF
Sbjct: 187 EVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF 232

[Close]

BLAST of Cp4.1LG08g13760 vs. NCBI nr
Match: KAG6596212.1 (WUSCHEL-related homeobox 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305 bits (782), Expect = 4.34e-103
Identity = 158/166 (95.18%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAATHQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSS 60
           ANVFYWFQNRRSRSRRRQRQLQAAA+HQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSS
Sbjct: 67  ANVFYWFQNRRSRSRRRQRQLQAAASHQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSS 126

Query: 61  SSG------GGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPT 120
           SS       GGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPT
Sbjct: 127 SSSSSASASGGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPT 186

Query: 121 EVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF 160
           EVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF
Sbjct: 187 EVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF 232

[Close]

BLAST of Cp4.1LG08g13760 vs. NCBI nr
Match: KAG7027753.1 (WUSCHEL-related homeobox 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305 bits (782), Expect = 6.32e-103
Identity = 158/166 (95.18%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAATHQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSS 60
           ANVFYWFQNRRSRSRRRQRQLQAAA+HQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSS
Sbjct: 67  ANVFYWFQNRRSRSRRRQRQLQAAASHQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSS 126

Query: 61  SSG------GGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPT 120
           SS       GGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPT
Sbjct: 127 SSSSSASASGGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPT 186

Query: 121 EVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF 160
           EVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF
Sbjct: 187 EVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF 232

[Close]

BLAST of Cp4.1LG08g13760 vs. ExPASy TrEMBL
Match: A0A6J1G3L9 (WUSCHEL-related homeobox 11-like OS=Cucurbita moschata OX=3662 GN=LOC111450454 PE=3 SV=1)

HSP 1 Score: 306 bits (784), Expect = 5.44e-104
Identity = 157/160 (98.12%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAATHQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSS 60
           ANVFYWFQNRRSRSRRRQRQLQAAA+HQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSS
Sbjct: 67  ANVFYWFQNRRSRSRRRQRQLQAAASHQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSS 126

Query: 61  SSGGGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPTEVPKGA 120
           SSGG  GGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPTEVPKGA
Sbjct: 127 SSGG--GGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPTEVPKGA 186

Query: 121 VDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF 160
           VDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF
Sbjct: 187 VDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF 224

[Close]

BLAST of Cp4.1LG08g13760 vs. ExPASy TrEMBL
Match: A0A6J1I653 (WUSCHEL-related homeobox 11-like OS=Cucurbita maxima OX=3661 GN=LOC111470259 PE=3 SV=1)

HSP 1 Score: 305 bits (782), Expect = 1.44e-103
Identity = 158/166 (95.18%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAATHQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSS 60
           ANVFYWFQNRRSRSRRRQRQLQAAATHQGGSAIHYDSGC GGSVMNFAPSSSYLGEGGSS
Sbjct: 67  ANVFYWFQNRRSRSRRRQRQLQAAATHQGGSAIHYDSGCGGGSVMNFAPSSSYLGEGGSS 126

Query: 61  SSG------GGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPT 120
           SS       GGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPT
Sbjct: 127 SSSSSASASGGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPT 186

Query: 121 EVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF 160
           EVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF
Sbjct: 187 EVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF 232

[Close]

BLAST of Cp4.1LG08g13760 vs. ExPASy TrEMBL
Match: A0A1S3B7B1 (WUSCHEL-related homeobox 11 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486815 PE=3 SV=1)

HSP 1 Score: 238 bits (608), Expect = 7.91e-77
Identity = 140/185 (75.68%), Postives = 149/185 (80.54%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAATHQGGS-AIHYD------SGCSGGS--VMNFAP-S 60
           ANVFYWFQNRRSRSRRRQRQLQAAATHQG S AIHYD       G +GGS  +MNFA  S
Sbjct: 67  ANVFYWFQNRRSRSRRRQRQLQAAATHQGSSSAIHYDCGNVSSGGYNGGSGGIMNFAGVS 126

Query: 61  SSYLGEGGSSSS-----------GGGGG--GFSMTDHMGISEIDQPMVVT--PSFCPSAT 120
           SSY+G G SSSS           GG GG  GFSM+ HMG SE+DQ MVVT  PSFCPS T
Sbjct: 127 SSYIGGGSSSSSSSASGVGGDCSGGSGGSSGFSMSGHMGFSEVDQQMVVTSTPSFCPSET 186

Query: 121 SNLEFQSGYIIIFINGVPTEVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQH 160
           SNLEFQSGYIIIFINGVPTEVPKGAVDMKAMFG++TVLVHSSGLPVLTNEFGISLH+LQH
Sbjct: 187 SNLEFQSGYIIIFINGVPTEVPKGAVDMKAMFGEETVLVHSSGLPVLTNEFGISLHTLQH 246

[Close]

BLAST of Cp4.1LG08g13760 vs. ExPASy TrEMBL
Match: A0A0A0LC01 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G812740 PE=3 SV=1)

HSP 1 Score: 238 bits (607), Expect = 1.12e-76
Identity = 140/185 (75.68%), Postives = 149/185 (80.54%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAATHQGGS-AIHYD------SGCSGGS--VMNFAP-S 60
           ANVFYWFQNRRSRSRRRQRQLQAAATHQG + AIHYD       G +GGS  +MNFA  S
Sbjct: 67  ANVFYWFQNRRSRSRRRQRQLQAAATHQGSTGAIHYDCGNVSSGGYNGGSGGIMNFAGVS 126

Query: 61  SSYLGEGGSSSS-----------GGGGG--GFSMTDHMGISEIDQPMVVT--PSFCPSAT 120
           SSYLG G SSSS           GG GG  GFSM+ HMG SE+DQ MVVT  PSFCPS T
Sbjct: 127 SSYLGGGSSSSSSSASGVGGDCSGGSGGSSGFSMSGHMGFSEVDQQMVVTSTPSFCPSET 186

Query: 121 SNLEFQSGYIIIFINGVPTEVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQH 160
           SNLEFQSGYIIIFINGVPTEVPKGAVDMKAMFG++TVLVHSSGLPVLTNEFGISLH+LQH
Sbjct: 187 SNLEFQSGYIIIFINGVPTEVPKGAVDMKAMFGEETVLVHSSGLPVLTNEFGISLHTLQH 246

[Close]

BLAST of Cp4.1LG08g13760 vs. ExPASy TrEMBL
Match: A0A6J1F5D3 (WUSCHEL-related homeobox 11-like OS=Cucurbita moschata OX=3662 GN=LOC111442307 PE=3 SV=1)

HSP 1 Score: 225 bits (574), Expect = 8.35e-72
Identity = 133/179 (74.30%), Postives = 137/179 (76.54%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAATHQ---GGSAIHYDSGCSGG----SVMNFAPSSSY 60
           ANVFYWFQNRRSRSRRRQRQLQAAATHQ   GG       G +GG     VMNFA SSSY
Sbjct: 63  ANVFYWFQNRRSRSRRRQRQLQAAATHQATGGGGGGGGGGGDNGGRYNSGVMNFAGSSSY 122

Query: 61  LGEGGSSSS-----GGGGGG------FSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQS 120
            G G SSSS     GGGGGG      FSM  HMG+SEIDQ M V PSFCP  T NLEFQS
Sbjct: 123 FGGGSSSSSSSASGGGGGGGSSESGCFSMVGHMGLSEIDQQMGVAPSFCPPETLNLEFQS 182

Query: 121 GY-IIIFINGVPTEVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYF 160
           GY IIIFINGVPTEVPKG VDMKAMFG +TVLVHSSGLPVLTNEFGISLHSLQHGE+YF
Sbjct: 183 GYNIIIFINGVPTEVPKGPVDMKAMFGQETVLVHSSGLPVLTNEFGISLHSLQHGESYF 241

[Close]

BLAST of Cp4.1LG08g13760 vs. TAIR 10
Match: AT3G03660.1 (WUSCHEL related homeobox 11 )

HSP 1 Score: 141.7 bits (356), Expect = 5.0e-34
Identity = 92/188 (48.94%), Postives = 108/188 (57.45%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAAT--------------------HQGGSAIHYDSGCS 60
           ANVFYWFQNRRSRSRRRQRQLQAAA                     H  GS + +  GCS
Sbjct: 76  ANVFYWFQNRRSRSRRRQRQLQAAAAAADATTNTCDQTMMVSNSLPHHSGSDLGF-GGCS 135

Query: 61  GGSVMNFAPSSSYLGEGGSSSSGGGGGG-FSMTDHMGISEI------DQPMVVTPSFCPS 120
             S   FA SSS  G G  + S  G     +M+  M   E       +    VT   CPS
Sbjct: 136 TSSNYLFASSSSSYGGGCDNQSNSGMENLLTMSGQMSYHEATHHHYQNHSSNVTSILCPS 195

Query: 121 -ATSNLEFQSGYIIIFINGVPTEVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHS 161
              SN ++Q G I +FINGVPTEV +G +DMKA FG+D VLVHSSG+P+ T+EFG  +HS
Sbjct: 196 DQNSNFQYQQGAITVFINGVPTEVTRGGIDMKATFGEDLVLVHSSGVPLPTDEFGFLMHS 255

[Close]

BLAST of Cp4.1LG08g13760 vs. TAIR 10
Match: AT3G03660.2 (WUSCHEL related homeobox 11 )

HSP 1 Score: 131.3 bits (329), Expect = 6.7e-31
Identity = 97/217 (44.70%), Postives = 113/217 (52.07%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAAT--------------------HQGGSAIHYDSGCS 60
           ANVFYWFQNRRSRSRRRQRQLQAAA                     H  GS + +  GCS
Sbjct: 76  ANVFYWFQNRRSRSRRRQRQLQAAAAAADATTNTCDQTMMVSNSLPHHSGSDLGF-GGCS 135

Query: 61  -------GGS--VMNF----------APSSSYLGEGGSSSSGGGGGG-----------FS 120
                  GGS  V +F            SSS      SSSS  GGG             +
Sbjct: 136 TSSNYLFGGSSQVPSFFLGLSSSPSSCSSSSSTSSSASSSSSYGGGCDNQSNSGMENLLT 195

Query: 121 MTDHMGISEI------DQPMVVTPSFCPS-ATSNLEFQSGYIIIFINGVPTEVPKGAVDM 161
           M+  M   E       +    VT   CPS   SN ++Q G I +FINGVPTEV +G +DM
Sbjct: 196 MSGQMSYHEATHHHYQNHSSNVTSILCPSDQNSNFQYQQGAITVFINGVPTEVTRGGIDM 255

[Close]

BLAST of Cp4.1LG08g13760 vs. TAIR 10
Match: AT5G17810.1 (WUSCHEL related homeobox 12 )

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-27
Identity = 89/202 (44.06%), Postives = 107/202 (52.97%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAAT------------HQGGSAIH--------YDSG-- 60
           ANVFYWFQNRRSRSRRR RQL AA T            H    ++H         D G  
Sbjct: 64  ANVFYWFQNRRSRSRRRHRQLLAATTAAATSIGAEDHQHMTAMSMHQYPCSNNEIDLGFG 123

Query: 61  -CSGGSVMNFAPSSS-------YLG----EGGSSSSGGGGGGFSMTDHMGISEIDQ---- 120
            CS  S   F   SS       +LG     GG  ++ G    F M  H       Q    
Sbjct: 124 SCSNLSANYFLNGSSSSQIPSFFLGLSSSSGGCENNNGMENLFKMYGHESDHNHQQQHHS 183

Query: 121 ---PMVVTPSFCPSATSNLEF-QSGYIIIFINGVPTEVPKGAVDMKAMFGDDTVLVHSSG 161
                V+ PS      SN ++ Q G++ +FINGVP EV KGA+DMK MFGDD+VL+HSSG
Sbjct: 184 SNAASVLNPS---DQNSNSQYEQEGFMTVFINGVPMEVTKGAIDMKTMFGDDSVLLHSSG 243

[Close]

BLAST of Cp4.1LG08g13760 vs. TAIR 10
Match: AT5G17810.2 (WUSCHEL related homeobox 12 )

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-27
Identity = 89/202 (44.06%), Postives = 107/202 (52.97%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAAT------------HQGGSAIH--------YDSG-- 60
           ANVFYWFQNRRSRSRRR RQL AA T            H    ++H         D G  
Sbjct: 64  ANVFYWFQNRRSRSRRRHRQLLAATTAAATSIGAEDHQHMTAMSMHQYPCSNNEIDLGFG 123

Query: 61  -CSGGSVMNFAPSSS-------YLG----EGGSSSSGGGGGGFSMTDHMGISEIDQ---- 120
            CS  S   F   SS       +LG     GG  ++ G    F M  H       Q    
Sbjct: 124 SCSNLSANYFLNGSSSSQIPSFFLGLSSSSGGCENNNGMENLFKMYGHESDHNHQQQHHS 183

Query: 121 ---PMVVTPSFCPSATSNLEF-QSGYIIIFINGVPTEVPKGAVDMKAMFGDDTVLVHSSG 161
                V+ PS      SN ++ Q G++ +FINGVP EV KGA+DMK MFGDD+VL+HSSG
Sbjct: 184 SNAASVLNPS---DQNSNSQYEQEGFMTVFINGVPMEVTKGAIDMKTMFGDDSVLLHSSG 243

[Close]

BLAST of Cp4.1LG08g13760 vs. TAIR 10
Match: AT2G33880.1 (homeobox-3 )

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-11
Identity = 28/70 (40.00%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 92  PSATSNLEFQS-GYIIIFINGVPTEVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISL 151
           PS +  L+ Q+   I +FIN +  EV  G  +++  FG++ VL++S+G P++T+E+G++L
Sbjct: 307 PSTSDQLQVQADARIRVFINEMELEVSSGPFNVRDAFGEEVVLINSAGQPIVTDEYGVAL 366

Query: 152 HSLQHGETYF 161
           H LQHG +Y+
Sbjct: 367 HPLQHGASYY 376

HSP 2 Score: 35.8 bits (81), Expect = 3.8e-02
Identity = 16/27 (59.26%), Postives = 20/27 (74.07%), Query Frame = 0


Query: 1   ANVFYWFQNRRSRSRRRQRQLQAAATH 28
           ANVFYWFQNR+SRS+ + R L   + H
Sbjct: 98  ANVFYWFQNRKSRSKHKLRLLHNHSKH 124

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g13760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6X7J3	7.0e-33	48.94	WUSCHEL-related homeobox 11 OS=Arabidopsis thaliana OX=3702 GN=WOX11 PE=2 SV=2	[more]
Q8GY25	1.7e-26	44.06	WUSCHEL-related homeobox 12 OS=Arabidopsis thaliana OX=3702 GN=WOX12 PE=2 SV=1	[more]
B8B644	3.6e-21	38.54	WUSCHEL-related homeobox 11 OS=Oryza sativa subsp. indica OX=39946 GN=WOX11 PE=3...	[more]
Q0D3I7	3.6e-21	38.54	WUSCHEL-related homeobox 11 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX11 PE...	[more]
A2XG77	1.2e-19	35.00	WUSCHEL-related homeobox 6 OS=Oryza sativa subsp. indica OX=39946 GN=WOX6 PE=3 S...	[more]

BLAST of Cp4.1LG08g13760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540920.1	1.87e-107	100.00	WUSCHEL-related homeobox 11-like [Cucurbita pepo subsp. pepo]	[more]
XP_022946378.1	1.12e-103	98.13	WUSCHEL-related homeobox 11-like [Cucurbita moschata]	[more]
XP_022971585.1	2.98e-103	95.18	WUSCHEL-related homeobox 11-like [Cucurbita maxima]	[more]
KAG6596212.1	4.34e-103	95.18	WUSCHEL-related homeobox 11, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7027753.1	6.32e-103	95.18	WUSCHEL-related homeobox 11, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]

BLAST of Cp4.1LG08g13760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G3L9	5.44e-104	98.13	WUSCHEL-related homeobox 11-like OS=Cucurbita moschata OX=3662 GN=LOC111450454 P...	[more]
A0A6J1I653	1.44e-103	95.18	WUSCHEL-related homeobox 11-like OS=Cucurbita maxima OX=3661 GN=LOC111470259 PE=...	[more]
A0A1S3B7B1	7.91e-77	75.68	WUSCHEL-related homeobox 11 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486815 P...	[more]
A0A0A0LC01	1.12e-76	75.68	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G812740 PE...	[more]
A0A6J1F5D3	8.35e-72	74.30	WUSCHEL-related homeobox 11-like OS=Cucurbita moschata OX=3662 GN=LOC111442307 P...	[more]

BLAST of Cp4.1LG08g13760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03660.1	5.0e-34	48.94	WUSCHEL related homeobox 11	[more]
AT3G03660.2	6.7e-31	44.70	WUSCHEL related homeobox 11	[more]
AT5G17810.1	1.2e-27	44.06	WUSCHEL related homeobox 12	[more]
AT5G17810.2	1.2e-27	44.06	WUSCHEL related homeobox 12	[more]
AT2G33880.1	3.5e-11	40.00	homeobox-3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044558	WUSCHEL-related homeobox 11-like	PANTHER	PTHR46998	WUSCHEL-RELATED HOMEOBOX 11	coord: 1..160
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 1..17 score: 8.988815
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 2..24

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g13760.1	Cp4.1LG08g13760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048830	adventitious root development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity