Cp4.1LG08g13700 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g13700
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	60S ribosomal protein L7-1-like
Location	Cp4.1LG08: 9870551 .. 9871414 (+)
RNA-Seq Expression	Cp4.1LG08g13700
Synteny	Cp4.1LG08g13700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACTCGACTTTGTCAAGATGAAGCACAGGATAAAGAGAAAAAGAACTGCCTTGGTGCCATCAAAATCAAAATTGATTTTTATAATTCGGATACAGGGGTAAGAATGTCTTAACATTTACTTTCTTTTCCCTCCTTTTGTGTAGCTTCACAAGATTAGTAATTGCTTCACTACATTTTTCCAGCAAGAACGACATGCATCCAAAGACAAGGAGTCTCTTATATAAGCTCGGACTAAGTAGAGTTTTCAGCGGGGTCTTTGCGAAGGCCAATGAGCATATTCTAGGAAAGCTACAAAGGGTGGAGCCATATGTGACATATGGGTATGTGAACAATCATTTTTCTTATACTAGGTCCACTAGATTTCACGCTTCTTTCTCCATGATTTTACTGAAATTTTGGTTGAATTTCAGATACCCTAATCTTAAAAATGTGAGGGAGCTCGTCCATAAGAAGGGATTTGCAAAGATAGACAAACAAAGAGTTCCTCTAACTGACAACAACATCATCGAACAGGTACGACAAACCATCTTAGCTACTCTACTCCCGGGTTGGAAAGACTTTGATAGTATTTCAAAAAGATTTTTAACTGTCAAAAGTTTTTTTAAGCACATGGCCTTATTCTCTTATACTTTAATGGTAAATTTCAGGAATTGGGCAAGCATGGAATCCTATGCATGGAGGATATTGTGCATGAAATTGCTAATGTTGGCCCACATTTTAAGGAGGTAATTTCCTTTCTATGGCCCTTTGAACTTGAAAAGCCAGGAAGTGGACTTCAAGGGAAAAAATCATTGTACAAGGAGGGTGGAGATGCTGGGAATAGAGAGGATGATATCAATGATCTGATTGATGCGATGAATTAG

mRNA sequence

GAACTCGACTTTGTCAAGATGAAGCACAGGATAAAGAGAAAAAGAACTGCCTTGGTGCCATCAAAATCAAAATTGATTTTTATAATTCGGATACAGGGCAAGAACGACATGCATCCAAAGACAAGGAGTCTCTTATATAAGCTCGGACTAAGTAGAGTTTTCAGCGGGGTCTTTGCGAAGGCCAATGAGCATATTCTAGGAAAGCTACAAAGGGTGGAGCCATATGTGACATATGGATACCCTAATCTTAAAAATGTGAGGGAGCTCGTCCATAAGAAGGGATTTGCAAAGATAGACAAACAAAGAGTTCCTCTAACTGACAACAACATCATCGAACAGGAATTGGGCAAGCATGGAATCCTATGCATGGAGGATATTGTGCATGAAATTGCTAATGTTGGCCCACATTTTAAGGAGGTAATTTCCTTTCTATGGCCCTTTGAACTTGAAAAGCCAGGAAGTGGACTTCAAGGGAAAAAATCATTGTACAAGGAGGGTGGAGATGCTGGGAATAGAGAGGATGATATCAATGATCTGATTGATGCGATGAATTAG

Coding sequence (CDS)

GAACTCGACTTTGTCAAGATGAAGCACAGGATAAAGAGAAAAAGAACTGCCTTGGTGCCATCAAAATCAAAATTGATTTTTATAATTCGGATACAGGGCAAGAACGACATGCATCCAAAGACAAGGAGTCTCTTATATAAGCTCGGACTAAGTAGAGTTTTCAGCGGGGTCTTTGCGAAGGCCAATGAGCATATTCTAGGAAAGCTACAAAGGGTGGAGCCATATGTGACATATGGATACCCTAATCTTAAAAATGTGAGGGAGCTCGTCCATAAGAAGGGATTTGCAAAGATAGACAAACAAAGAGTTCCTCTAACTGACAACAACATCATCGAACAGGAATTGGGCAAGCATGGAATCCTATGCATGGAGGATATTGTGCATGAAATTGCTAATGTTGGCCCACATTTTAAGGAGGTAATTTCCTTTCTATGGCCCTTTGAACTTGAAAAGCCAGGAAGTGGACTTCAAGGGAAAAAATCATTGTACAAGGAGGGTGGAGATGCTGGGAATAGAGAGGATGATATCAATGATCTGATTGATGCGATGAATTAG

Protein sequence

ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAKANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLIDAMN

Homology

[Close]

BLAST of Cp4.1LG08g13700 vs. ExPASy Swiss-Prot
Match: Q9SAI5 (60S ribosomal protein L7-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7A PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.3e-56
Identity = 109/185 (58.92%), Postives = 139/185 (75.14%), Query Frame = 0


Query: 1   ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 60
           E+D ++MK R+KR +++  P KS L+FIIRIQGKNDMHPKT+ +L  L L  VF+GVFAK
Sbjct: 63  EVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVFAK 122

Query: 61  ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 120
           A + +  KL +V+PYVTYGYPN K+V++L++KKG   I+   VPLTDNNIIEQ LG+H I
Sbjct: 123 ATDSLFQKLLKVQPYVTYGYPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIEQALGEHKI 182

Query: 121 LCMEDIVHEIANVGPHFKEVISFLWPFELEKP-GSGLQGKKSLYKEGGDAGNREDDINDL 180
           L +ED+V+EIA VG HF+EV+ FL P +L KP    L  KK ++ EGGD GNRED INDL
Sbjct: 183 LGIEDLVNEIARVGDHFREVMRFLGPLKLNKPVADVLHRKKQVFSEGGDTGNREDKINDL 242

Query: 181 IDAMN 185
           I  MN
Sbjct: 243 ISKMN 247

[Close]

BLAST of Cp4.1LG08g13700 vs. ExPASy Swiss-Prot
Match: P60040 (60S ribosomal protein L7-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7B PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.6e-55
Identity = 100/184 (54.35%), Postives = 139/184 (75.54%), Query Frame = 0


Query: 1   ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 60
           E + + +K   K K    V  ++KL+FIIRI+G N + PKT+ +L  L L ++F+GVF K
Sbjct: 59  EKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLK 118

Query: 61  ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 120
            N+  +  L+RVEPYVTYG+PNLK+V+EL++K+G+ K++ QR+ LTDN+I+EQ LGKHGI
Sbjct: 119 VNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGI 178

Query: 121 LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI 180
           +C ED++HEI  VGPHFKE  +FLWPF+L+ P  GL+ K++ Y EGGDAGNRE+ IN+LI
Sbjct: 179 ICTEDLIHEILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELI 238

Query: 181 DAMN 185
             MN
Sbjct: 239 RRMN 242

[Close]

BLAST of Cp4.1LG08g13700 vs. ExPASy Swiss-Prot
Match: P60039 (60S ribosomal protein L7-3 OS=Arabidopsis thaliana OX=3702 GN=RPL7C PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.6e-55
Identity = 98/182 (53.85%), Postives = 140/182 (76.92%), Query Frame = 0


Query: 3   DFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAKAN 62
           + +++K   K K    V  ++KL+FIIRI+G N + PKT+ +L  L L ++F+GVF K N
Sbjct: 61  ELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVN 120

Query: 63  EHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGILC 122
           +  +  L+RVEPYVTYGYPNLK+V+EL++K+G+ K++ QR+ LTDN+I++Q LGKHGI+C
Sbjct: 121 KATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIIC 180

Query: 123 MEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLIDA 182
           +ED++HEI  VGPHFKE  +FLWPF+L+ P  GL+ K++ Y EGGDAGNRE+ IN+L+  
Sbjct: 181 VEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRR 240

Query: 183 MN 185
           MN
Sbjct: 241 MN 242

[Close]

BLAST of Cp4.1LG08g13700 vs. ExPASy Swiss-Prot
Match: Q9LHP1 (60S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.6e-55
Identity = 99/184 (53.80%), Postives = 140/184 (76.09%), Query Frame = 0


Query: 1   ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 60
           E + +++K   K K    V  ++KL+FIIRI+G N + PKT+ +L  L L ++F+GVF K
Sbjct: 61  ERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLK 120

Query: 61  ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 120
            N+  +  L+RVEPYVTYGYPNLK+V+EL++K+GF K++ QR  LTDN+I++Q LGKHGI
Sbjct: 121 VNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGI 180

Query: 121 LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI 180
           +C+ED++HEI  VGPHFKE  +FLWPF+L+ P  G++ K++ Y EGGDAGNRE+ IN+L+
Sbjct: 181 ICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELV 240

Query: 181 DAMN 185
             MN
Sbjct: 241 RRMN 244

[Close]

BLAST of Cp4.1LG08g13700 vs. ExPASy Swiss-Prot
Match: Q4R506 (60S ribosomal protein L7 OS=Macaca fascicularis OX=9541 GN=RPL7 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.8e-48
Identity = 89/180 (49.44%), Postives = 127/180 (70.56%), Query Frame = 0


Query: 5   VKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAKANEH 64
           ++M    ++     VP++ KL F+IRI+G N + PK R +L  L L ++F+G F K N+ 
Sbjct: 68  IRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKA 127

Query: 65  ILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGILCME 124
            +  L+ VEPY+ +GYPNLK+V EL++K+G+ KI+K+R+ LTDN +I + LGK+GI+CME
Sbjct: 128 SINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICME 187

Query: 125 DIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLIDAMN 184
           D++HEI  VG  FKE  +FLWPF+L  P  G++ K + + EGGDAGNRED IN LI  MN
Sbjct: 188 DLIHEICTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 247

[Close]

BLAST of Cp4.1LG08g13700 vs. NCBI nr
Match: XP_022971274.1 (60S ribosomal protein L7-1-like [Cucurbita maxima] >XP_023539261.1 60S ribosomal protein L7-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372 bits (956), Expect = 3.27e-129
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 60
           ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK
Sbjct: 63  ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 122

Query: 61  ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 120
           ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI
Sbjct: 123 ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 182

Query: 121 LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI 180
           LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI
Sbjct: 183 LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI 242

Query: 181 DAMN 184
           DAMN
Sbjct: 243 DAMN 246

[Close]

BLAST of Cp4.1LG08g13700 vs. NCBI nr
Match: KAG6596206.1 (60S ribosomal protein L7-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 370 bits (951), Expect = 1.89e-128
Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 60
           ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK
Sbjct: 63  ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 122

Query: 61  ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 120
           ANEH LGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI
Sbjct: 123 ANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 182

Query: 121 LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI 180
           LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI
Sbjct: 183 LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI 242

Query: 181 DAMN 184
           DAMN
Sbjct: 243 DAMN 246

[Close]

BLAST of Cp4.1LG08g13700 vs. NCBI nr
Match: KAG7027745.1 (60S ribosomal protein L7-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 370 bits (951), Expect = 1.89e-128
Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 60
           ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK
Sbjct: 63  ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 122

Query: 61  ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 120
           ANEH LGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI
Sbjct: 123 ANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 182

Query: 121 LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI 180
           LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI
Sbjct: 183 LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI 242

Query: 181 DAMN 184
           DAMN
Sbjct: 243 DAMN 246

[Close]

BLAST of Cp4.1LG08g13700 vs. NCBI nr
Match: XP_022944010.1 (60S ribosomal protein L7-1-like [Cucurbita moschata])

HSP 1 Score: 369 bits (946), Expect = 1.09e-127
Identity = 181/184 (98.37%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 60
           ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTR+LLYKLGLSRVFSGVFAK
Sbjct: 63  ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRTLLYKLGLSRVFSGVFAK 122

Query: 61  ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 120
           ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI
Sbjct: 123 ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 182

Query: 121 LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI 180
           LCMEDIVHEIANVGPHF+EVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIN+LI
Sbjct: 183 LCMEDIVHEIANVGPHFREVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINELI 242

Query: 181 DAMN 184
           DAMN
Sbjct: 243 DAMN 246

[Close]

BLAST of Cp4.1LG08g13700 vs. NCBI nr
Match: XP_023522823.1 (60S ribosomal protein L7-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360 bits (925), Expect = 1.57e-125
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 7   MKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAKANEHIL 66
           MKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAKANEHIL
Sbjct: 1   MKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAKANEHIL 60

Query: 67  GKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGILCMEDI 126
           GKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGILCMEDI
Sbjct: 61  GKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGILCMEDI 120

Query: 127 VHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLIDAMN 184
           VHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLIDAMN
Sbjct: 121 VHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLIDAMN 178

[Close]

BLAST of Cp4.1LG08g13700 vs. ExPASy TrEMBL
Match: A0A6J1I831 (60S ribosomal protein L7-1-like OS=Cucurbita maxima OX=3661 GN=LOC111470044 PE=3 SV=1)

HSP 1 Score: 372 bits (956), Expect = 1.59e-129
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 60
           ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK
Sbjct: 63  ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 122

Query: 61  ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 120
           ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI
Sbjct: 123 ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 182

Query: 121 LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI 180
           LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI
Sbjct: 183 LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI 242

Query: 181 DAMN 184
           DAMN
Sbjct: 243 DAMN 246

[Close]

BLAST of Cp4.1LG08g13700 vs. ExPASy TrEMBL
Match: A0A6J1FYF0 (60S ribosomal protein L7-1-like OS=Cucurbita moschata OX=3662 GN=LOC111448566 PE=3 SV=1)

HSP 1 Score: 369 bits (946), Expect = 5.30e-128
Identity = 181/184 (98.37%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 60
           ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTR+LLYKLGLSRVFSGVFAK
Sbjct: 63  ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRTLLYKLGLSRVFSGVFAK 122

Query: 61  ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 120
           ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI
Sbjct: 123 ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 182

Query: 121 LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI 180
           LCMEDIVHEIANVGPHF+EVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIN+LI
Sbjct: 183 LCMEDIVHEIANVGPHFREVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINELI 242

Query: 181 DAMN 184
           DAMN
Sbjct: 243 DAMN 246

[Close]

BLAST of Cp4.1LG08g13700 vs. ExPASy TrEMBL
Match: A0A6J1DN17 (60S ribosomal protein L7-1-like OS=Momordica charantia OX=3673 GN=LOC111021521 PE=3 SV=1)

HSP 1 Score: 330 bits (846), Expect = 9.37e-113
Identity = 161/185 (87.03%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 60
           ELD VKMKHR KRKR ALVPS S+LIFIIRIQGKNDMHPKTR +LYKLGLSR+FS VFAK
Sbjct: 63  ELDLVKMKHRTKRKRHALVPSNSRLIFIIRIQGKNDMHPKTRKILYKLGLSRIFSAVFAK 122

Query: 61  ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 120
           ANE ILGKLQRVEPYVTYGYPNLKNV EL++KKGFAKIDKQ+VP+TDNNIIEQ LGKHGI
Sbjct: 123 ANESILGKLQRVEPYVTYGYPNLKNVSELIYKKGFAKIDKQKVPITDNNIIEQALGKHGI 182

Query: 121 LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSG-LQGKKSLYKEGGDAGNREDDINDL 180
           LCMEDIVH+IANVGPHFKEVISFLWPFEL+KPG G LQGKK+LYK+GGDAGNREDDINDL
Sbjct: 183 LCMEDIVHQIANVGPHFKEVISFLWPFELDKPGGGGLQGKKTLYKDGGDAGNREDDINDL 242

Query: 181 IDAMN 184
           I+ MN
Sbjct: 243 INEMN 247

[Close]

BLAST of Cp4.1LG08g13700 vs. ExPASy TrEMBL
Match: A0A5D3E729 (60S ribosomal protein L7-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003720 PE=3 SV=1)

HSP 1 Score: 329 bits (843), Expect = 2.98e-112
Identity = 161/186 (86.56%), Postives = 174/186 (93.55%), Query Frame = 0


Query: 1   ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 60
           ELD VKMKHR KRKR+A+VPSKS+LIFIIRIQGKNDMHPKTR +LY LGLSR+FS VFAK
Sbjct: 65  ELDLVKMKHRTKRKRSAIVPSKSQLIFIIRIQGKNDMHPKTRKILYNLGLSRIFSAVFAK 124

Query: 61  ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 120
           ANE +LGKLQRVEPYVTYGYPNLKNVRELV+KKGFAKIDKQRVPLTDNNIIEQ LGKHGI
Sbjct: 125 ANESVLGKLQRVEPYVTYGYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALGKHGI 184

Query: 121 LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSG--LQGKKSLYKEGGDAGNREDDIND 180
           +C+ED+V+EIANVGPHFKEVISFLWPFELEKPG G  LQGKKS YK+GGDAGNREDDIND
Sbjct: 185 VCVEDMVYEIANVGPHFKEVISFLWPFELEKPGGGGCLQGKKSSYKDGGDAGNREDDIND 244

Query: 181 LIDAMN 184
           LI+ MN
Sbjct: 245 LINEMN 250

[Close]

BLAST of Cp4.1LG08g13700 vs. ExPASy TrEMBL
Match: A0A1S3CPC0 (60S ribosomal protein L7-1 OS=Cucumis melo OX=3656 GN=LOC103503275 PE=3 SV=1)

HSP 1 Score: 329 bits (843), Expect = 2.98e-112
Identity = 161/186 (86.56%), Postives = 174/186 (93.55%), Query Frame = 0


Query: 1   ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 60
           ELD VKMKHR KRKR+A+VPSKS+LIFIIRIQGKNDMHPKTR +LY LGLSR+FS VFAK
Sbjct: 65  ELDLVKMKHRTKRKRSAIVPSKSQLIFIIRIQGKNDMHPKTRKILYNLGLSRIFSAVFAK 124

Query: 61  ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 120
           ANE +LGKLQRVEPYVTYGYPNLKNVRELV+KKGFAKIDKQRVPLTDNNIIEQ LGKHGI
Sbjct: 125 ANESVLGKLQRVEPYVTYGYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALGKHGI 184

Query: 121 LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSG--LQGKKSLYKEGGDAGNREDDIND 180
           +C+ED+V+EIANVGPHFKEVISFLWPFELEKPG G  LQGKKS YK+GGDAGNREDDIND
Sbjct: 185 VCVEDMVYEIANVGPHFKEVISFLWPFELEKPGGGGCLQGKKSSYKDGGDAGNREDDIND 244

Query: 181 LIDAMN 184
           LI+ MN
Sbjct: 245 LINEMN 250

[Close]

BLAST of Cp4.1LG08g13700 vs. TAIR 10
Match: AT1G80750.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 219.9 bits (559), Expect = 1.7e-57
Identity = 109/185 (58.92%), Postives = 139/185 (75.14%), Query Frame = 0


Query: 1   ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 60
           E+D ++MK R+KR +++  P KS L+FIIRIQGKNDMHPKT+ +L  L L  VF+GVFAK
Sbjct: 63  EVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVFAK 122

Query: 61  ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 120
           A + +  KL +V+PYVTYGYPN K+V++L++KKG   I+   VPLTDNNIIEQ LG+H I
Sbjct: 123 ATDSLFQKLLKVQPYVTYGYPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIEQALGEHKI 182

Query: 121 LCMEDIVHEIANVGPHFKEVISFLWPFELEKP-GSGLQGKKSLYKEGGDAGNREDDINDL 180
           L +ED+V+EIA VG HF+EV+ FL P +L KP    L  KK ++ EGGD GNRED INDL
Sbjct: 183 LGIEDLVNEIARVGDHFREVMRFLGPLKLNKPVADVLHRKKQVFSEGGDTGNREDKINDL 242

Query: 181 IDAMN 185
           I  MN
Sbjct: 243 ISKMN 247

[Close]

BLAST of Cp4.1LG08g13700 vs. TAIR 10
Match: AT2G44120.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-56
Identity = 98/182 (53.85%), Postives = 140/182 (76.92%), Query Frame = 0


Query: 3   DFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAKAN 62
           + +++K   K K    V  ++KL+FIIRI+G N + PKT+ +L  L L ++F+GVF K N
Sbjct: 61  ELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVN 120

Query: 63  EHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGILC 122
           +  +  L+RVEPYVTYGYPNLK+V+EL++K+G+ K++ QR+ LTDN+I++Q LGKHGI+C
Sbjct: 121 KATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIIC 180

Query: 123 MEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLIDA 182
           +ED++HEI  VGPHFKE  +FLWPF+L+ P  GL+ K++ Y EGGDAGNRE+ IN+L+  
Sbjct: 181 VEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRR 240

Query: 183 MN 185
           MN
Sbjct: 241 MN 242

[Close]

BLAST of Cp4.1LG08g13700 vs. TAIR 10
Match: AT2G01250.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-56
Identity = 100/184 (54.35%), Postives = 139/184 (75.54%), Query Frame = 0


Query: 1   ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 60
           E + + +K   K K    V  ++KL+FIIRI+G N + PKT+ +L  L L ++F+GVF K
Sbjct: 59  EKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLK 118

Query: 61  ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 120
            N+  +  L+RVEPYVTYG+PNLK+V+EL++K+G+ K++ QR+ LTDN+I+EQ LGKHGI
Sbjct: 119 VNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGI 178

Query: 121 LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI 180
           +C ED++HEI  VGPHFKE  +FLWPF+L+ P  GL+ K++ Y EGGDAGNRE+ IN+LI
Sbjct: 179 ICTEDLIHEILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELI 238

Query: 181 DAMN 185
             MN
Sbjct: 239 RRMN 242

[Close]

BLAST of Cp4.1LG08g13700 vs. TAIR 10
Match: AT2G44120.2 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-56
Identity = 98/182 (53.85%), Postives = 140/182 (76.92%), Query Frame = 0


Query: 3   DFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAKAN 62
           + +++K   K K    V  ++KL+FIIRI+G N + PKT+ +L  L L ++F+GVF K N
Sbjct: 66  ELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVN 125

Query: 63  EHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGILC 122
           +  +  L+RVEPYVTYGYPNLK+V+EL++K+G+ K++ QR+ LTDN+I++Q LGKHGI+C
Sbjct: 126 KATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIIC 185

Query: 123 MEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLIDA 182
           +ED++HEI  VGPHFKE  +FLWPF+L+ P  GL+ K++ Y EGGDAGNRE+ IN+L+  
Sbjct: 186 VEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRR 245

Query: 183 MN 185
           MN
Sbjct: 246 MN 247

[Close]

BLAST of Cp4.1LG08g13700 vs. TAIR 10
Match: AT3G13580.3 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-56
Identity = 99/184 (53.80%), Postives = 140/184 (76.09%), Query Frame = 0


Query: 1   ELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAK 60
           E + +++K   K K    V  ++KL+FIIRI+G N + PKT+ +L  L L ++F+GVF K
Sbjct: 61  ERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLK 120

Query: 61  ANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGI 120
            N+  +  L+RVEPYVTYGYPNLK+V+EL++K+GF K++ QR  LTDN+I++Q LGKHGI
Sbjct: 121 VNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGI 180

Query: 121 LCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLI 180
           +C+ED++HEI  VGPHFKE  +FLWPF+L+ P  G++ K++ Y EGGDAGNRE+ IN+L+
Sbjct: 181 ICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELV 240

Query: 181 DAMN 185
             MN
Sbjct: 241 RRMN 244

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g13700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAI5	2.3e-56	58.92	60S ribosomal protein L7-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7A PE=2 SV=1	[more]
P60040	2.6e-55	54.35	60S ribosomal protein L7-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7B PE=1 SV=1	[more]
P60039	2.6e-55	53.85	60S ribosomal protein L7-3 OS=Arabidopsis thaliana OX=3702 GN=RPL7C PE=2 SV=1	[more]
Q9LHP1	2.6e-55	53.80	60S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1	[more]
Q4R506	1.8e-48	49.44	60S ribosomal protein L7 OS=Macaca fascicularis OX=9541 GN=RPL7 PE=2 SV=1	[more]

BLAST of Cp4.1LG08g13700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971274.1	3.27e-129	100.00	60S ribosomal protein L7-1-like [Cucurbita maxima] >XP_023539261.1 60S ribosomal...	[more]
KAG6596206.1	1.89e-128	99.46	60S ribosomal protein L7-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7027745.1	1.89e-128	99.46	60S ribosomal protein L7-1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022944010.1	1.09e-127	98.37	60S ribosomal protein L7-1-like [Cucurbita moschata]	[more]
XP_023522823.1	1.57e-125	100.00	60S ribosomal protein L7-3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG08g13700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I831	1.59e-129	100.00	60S ribosomal protein L7-1-like OS=Cucurbita maxima OX=3661 GN=LOC111470044 PE=3...	[more]
A0A6J1FYF0	5.30e-128	98.37	60S ribosomal protein L7-1-like OS=Cucurbita moschata OX=3662 GN=LOC111448566 PE...	[more]
A0A6J1DN17	9.37e-113	87.03	60S ribosomal protein L7-1-like OS=Momordica charantia OX=3673 GN=LOC111021521 P...	[more]
A0A5D3E729	2.98e-112	86.56	60S ribosomal protein L7-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3CPC0	2.98e-112	86.56	60S ribosomal protein L7-1 OS=Cucumis melo OX=3656 GN=LOC103503275 PE=3 SV=1	[more]

BLAST of Cp4.1LG08g13700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80750.1	1.7e-57	58.92	Ribosomal protein L30/L7 family protein	[more]
AT2G44120.1	1.8e-56	53.85	Ribosomal protein L30/L7 family protein	[more]
AT2G01250.1	1.8e-56	54.35	Ribosomal protein L30/L7 family protein	[more]
AT2G44120.2	1.8e-56	53.85	Ribosomal protein L30/L7 family protein	[more]
AT3G13580.3	1.8e-56	53.80	Ribosomal protein L30/L7 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016082	Ribosomal protein L30, ferredoxin-like fold domain	PFAM	PF00327	Ribosomal_L30	coord: 26..76 e-value: 9.2E-11 score: 41.5
IPR036919	Ribosomal protein L30, ferredoxin-like fold domain superfamily	GENE3D	3.30.1390.20		coord: 25..184 e-value: 4.7E-28 score: 99.7
IPR036919	Ribosomal protein L30, ferredoxin-like fold domain superfamily	SUPERFAMILY	55129	Ribosomal protein L30p/L7e	coord: 25..184
IPR005998	Ribosomal protein L7, eukaryotic	TIGRFAM	TIGR01310	TIGR01310	coord: 3..184 e-value: 1.5E-79 score: 264.9
IPR039699	Ribosomal protein L7/L30	PANTHER	PTHR11524	60S RIBOSOMAL PROTEIN L7	coord: 1..184
None	No IPR available	PANTHER	PTHR11524:SF36	60S RIBOSOMAL PROTEIN L7-1	coord: 1..184
IPR035808	Ribosomal protein L7, eukaryotic/archaeal	CDD	cd01657	Ribosomal_L7_archeal_euk	coord: 25..184 e-value: 2.6379E-76 score: 223.558

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g13700.1	Cp4.1LG08g13700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome