Cp4.1LG08g12890 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g12890
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	F-box protein
Location	Cp4.1LG08: 9424722 .. 9427203 (+)
RNA-Seq Expression	Cp4.1LG08g12890
Synteny	Cp4.1LG08g12890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGTAAGAGGAACGCGATCATCGCCATTTCCCATGGCCCGCATGGACCCACTCTTCCACTTCGCATGTGTCACAACCAATAATAATTCAACACGTGTCCATCTCATTACCTGCAGTTTTTTGTTCGCTTCTAAAACTGTGGCTTCGCAAATTTTTTTTTGGCGGGCACTTTCGTGAAATTCAAATAAAGATCAAACCCTAGCCTCTCTTTCGCTTCTCGTCCTTGTTTTCCCTCCCTTCTTGTTCTTCTTCTTCTCTCTCTCTCTCTCTCTCTATTTCTCTCTCGTTATTGCGAATTTCGAGGGGTTTATCCTAAATTCTTTCTATTCACAGGTTAGTTTCGATTTCGTTTATTCCCATTTCTCTGATTTGTTTTTTGTTTCGTTTCGATTCTTGCTGCGTTTCTTGAATGTTTTTGATTCGTTATAGATTTGTAGTTTGAGGGGTTTGGGTTTTATTTTCAGTCTCTTTTCGAGGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGCTGTTCTTGGCGCTTGTGATGAATTTCATATGCAGTTTGAATGTTCAAGAACTCATTGAAACTGTTTGAATTTTGTGTGGCAGGTTATGTTGATGGGTTGGTTTTAATTATTCATGTTACGGGTTCATAAGAGTGGTAGAAAAAGGCGTTTGGGTTTGCTGTGAATGGGGAAAGTAAAGGAAGGAATGGGGGAGGCGTTTTTGAACGAAAGGGAGTCGAAGAAATTGAAGAGGAGACGGCGGACGAACGGCTCTTCTGGGAAGTATTTGAAGCCTGGTGCTCTGGCGAAGCTGCGGTGCAGCAAGGGCTCGGTTGGTAAATCTTGTACTTATCTTGGAAGGAAGAGGGTGGCTGTGTTGGATGCTGGGAAGACTAAGAGGAATAATGCGGGGCTTGAGGACAAGGTTTCTGATAGAAGTCCTTTGATGTTGTCACCTGTCAAGTTGGTGATGCATATAAATCATATTAGTACCCCAAGAACTCCTCGGGTTGAAAGCTGCGAATCAGAGTCGCGACTGGAATCTCTGCCTATGGATCTATTGGTATTGTTAATATTCATCTAATTCTTTTCTGATTCCTAGAACAAAATGTGTTCATCTCAAAATTACATCAAACGCATAAAACCCAACTTATTCCGTTTTCTTTACAGATTGTTTGATCTTCTTTTTCTTGCATTGTTTTTAAGCATGATCTGTGACTAGAAATATTTGTTCCTTCAATGGATCATGGATTTTCAATGGGTTTTTAGTGTCAAAACCAATGTTGTATGATTCATTTCATTTTGTGAAGATAATGTAAGAAAGGAGTAGACGTGACCAACTTTTAGTAAAAAGGCCAAAGCCTTTCTAGCTGTTACTTTCTAAATTATCAACTTAGAAAACCCAAGTTCTTTTGATTTTGAAGAACATGTTTGATCACGCATATAGATTTGAGTAATCATGTTGATCTGATCTGGATATGCGCTCAGATTTTGAATTGTTGATGGGTATTAATTTTATGATCTTGTGTCTTAAATTTGTAACTTGAAGGTGAAAGTACTTTGCCATTTGCACCACGACCAACTGAGGGCTGTATTCCATGTCTCTCAACGGATCAGAAAGGCTGTAAGTCATTGTTTCTGTCTGCCTTAAACGCATCACATTTGTTTGAGATTGATGATCATGACCCTTTATTGAACAGGTTTTGATGGCGAGGCAGTTCCACTTTAATTACACAACCCCAGATCGATCCAGGCAGGAGATGTTGAGAACAACCACCCCTCGACCCACTGAACACTGGCCCTTTGTAAGGTTGGTATTCATTGTTCATGTTTATTTGAACCGGTGAAGGCATATTCTGTTGCTGAACTAGAAATAAATTTTATATTGGACAGCAAGGGAGATGGTAAAGGCTTTTCATTGCCAAGCCCCCACACTCCGAAAGCACCAAGACACGGTCCTCGACCGCCATCTCGTCTGAAAGTTTCAGAGATGAGACAGGTTGCTGCTGTTCTGTTTCAAGAATCAGGTTTTCCTTCAAGATGCATGGTTCCCTCTGTTATACCTAAGCCACTCTGCAAATCCCTGGCCTCGAACCGGGTTCTGTTCTACGAGGAGGAGTTGTGCCAAGCTGTTGCTCAAAATAAACTTCGTTGATTGATGTAGTTGGCAATTTCTCGTTGTCTGTTGTTTTTGTGTATATAGGATTTGTGTTGTTGCCTGTAGCAGGTTGGTTTTTGTTGAGCCAATATAGGAATTCTACAAATTTTGTAGCTGCGTTTGATGCAGATTAGGGGTATCATGGAAGTTCTTGTTCTGTTGGAATGAGGGTTTTAATGATTGATTCAGACTGTAGCTGTGGGAATAATCTATTCCAAACTGGTTACTTGTATAGTTCTATATATATCTTCTAAAGAGTGGTTTTCTGCTAC

mRNA sequence

TGAGTAAGAGGAACGCGATCATCGCCATTTCCCATGGCCCGCATGGACCCACTCTTCCACTTCGCATGTGTCACAACCAATAATAATTCAACACGTGTCCATCTCATTACCTGCAGTTTTTTGTTCGCTTCTAAAACTGTGGCTTCGCAAATTTTTTTTTGGCGGGCACTTTCGTGAAATTCAAATAAAGATCAAACCCTAGCCTCTCTTTCGCTTCTCGTCCTTGTTTTCCCTCCCTTCTTGTTCTTCTTCTTCTCTCTCTCTCTCTCTCTCTATTTCTCTCTCGTTATTGCGAATTTCGAGGGGTTTATCCTAAATTCTTTCTATTCACAGGTTATGTTGATGGGTTGGTTTTAATTATTCATGTTACGGGTTCATAAGAGTGGTAGAAAAAGGCGTTTGGGTTTGCTGTGAATGGGGAAAGTAAAGGAAGGAATGGGGGAGGCGTTTTTGAACGAAAGGGAGTCGAAGAAATTGAAGAGGAGACGGCGGACGAACGGCTCTTCTGGGAAGTATTTGAAGCCTGGTGCTCTGGCGAAGCTGCGGTGCAGCAAGGGCTCGGTTGGTAAATCTTGTACTTATCTTGGAAGGAAGAGGGTGGCTGTGTTGGATGCTGGGAAGACTAAGAGGAATAATGCGGGGCTTGAGGACAAGGTTTCTGATAGAAGTCCTTTGATGTTGTCACCTGTCAAGTTGGTGATGCATATAAATCATATTAGTACCCCAAGAACTCCTCGGGTTGAAAGCTGCGAATCAGAGTCGCGACTGGAATCTCTGCCTATGGATCTATTGGTGAAAGTACTTTGCCATTTGCACCACGACCAACTGAGGGCTGTATTCCATGTCTCTCAACGGATCAGAAAGGCTGTTTTGATGGCGAGGCAGTTCCACTTTAATTACACAACCCCAGATCGATCCAGGCAGGAGATGTTGAGAACAACCACCCCTCGACCCACTGAACACTGGCCCTTTGTAAGCAAGGGAGATGGTAAAGGCTTTTCATTGCCAAGCCCCCACACTCCGAAAGCACCAAGACACGGTCCTCGACCGCCATCTCGTCTGAAAGTTTCAGAGATGAGACAGGTTGCTGCTGTTCTGTTTCAAGAATCAGGTTTTCCTTCAAGATGCATGGTTCCCTCTGTTATACCTAAGCCACTCTGCAAATCCCTGGCCTCGAACCGGGTTCTGTTCTACGAGGAGGAGTTGTGCCAAGCTGTTGCTCAAAATAAACTTCGTTGATTGATGTAGTTGGCAATTTCTCGTTGTCTGTTGTTTTTGTGTATATAGGATTTGTGTTGTTGCCTGTAGCAGGTTGGTTTTTGTTGAGCCAATATAGGAATTCTACAAATTTTGTAGCTGCGTTTGATGCAGATTAGGGGTATCATGGAAGTTCTTGTTCTGTTGGAATGAGGGTTTTAATGATTGATTCAGACTGTAGCTGTGGGAATAATCTATTCCAAACTGGTTACTTGTATAGTTCTATATATATCTTCTAAAGAGTGGTTTTCTGCTAC

Coding sequence (CDS)

ATGGGGAAAGTAAAGGAAGGAATGGGGGAGGCGTTTTTGAACGAAAGGGAGTCGAAGAAATTGAAGAGGAGACGGCGGACGAACGGCTCTTCTGGGAAGTATTTGAAGCCTGGTGCTCTGGCGAAGCTGCGGTGCAGCAAGGGCTCGGTTGGTAAATCTTGTACTTATCTTGGAAGGAAGAGGGTGGCTGTGTTGGATGCTGGGAAGACTAAGAGGAATAATGCGGGGCTTGAGGACAAGGTTTCTGATAGAAGTCCTTTGATGTTGTCACCTGTCAAGTTGGTGATGCATATAAATCATATTAGTACCCCAAGAACTCCTCGGGTTGAAAGCTGCGAATCAGAGTCGCGACTGGAATCTCTGCCTATGGATCTATTGGTGAAAGTACTTTGCCATTTGCACCACGACCAACTGAGGGCTGTATTCCATGTCTCTCAACGGATCAGAAAGGCTGTTTTGATGGCGAGGCAGTTCCACTTTAATTACACAACCCCAGATCGATCCAGGCAGGAGATGTTGAGAACAACCACCCCTCGACCCACTGAACACTGGCCCTTTGTAAGCAAGGGAGATGGTAAAGGCTTTTCATTGCCAAGCCCCCACACTCCGAAAGCACCAAGACACGGTCCTCGACCGCCATCTCGTCTGAAAGTTTCAGAGATGAGACAGGTTGCTGCTGTTCTGTTTCAAGAATCAGGTTTTCCTTCAAGATGCATGGTTCCCTCTGTTATACCTAAGCCACTCTGCAAATCCCTGGCCTCGAACCGGGTTCTGTTCTACGAGGAGGAGTTGTGCCAAGCTGTTGCTCAAAATAAACTTCGTTGA

Protein sequence

MGKVKEGMGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRKRVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVSKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPSRCMVPSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR

Homology

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BLAST of Cp4.1LG08g12890 vs. ExPASy Swiss-Prot
Match: Q5XF11 (F-box protein At4g35930 OS=Arabidopsis thaliana OX=3702 GN=At4g35930 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.2e-74
Identity = 162/321 (50.47%), Postives = 203/321 (63.24%), Query Frame = 0


Query: 8   MGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRKRVAVLDA 67
           MG+    + +SK   R+++   SS KYLKPGAL +L  SK S  KSC  LG+KRV V D 
Sbjct: 1   MGKVSPKDLDSKTSVRKKKLKSSSNKYLKPGALVQLCYSKASAAKSCNELGKKRVPVFDT 60

Query: 68  ------GKTK---------RNNAGLEDKVSD----------------------------- 127
                 GK +         RNN    ++++                              
Sbjct: 61  KSCNDLGKKRVPVFDIKHARNNKMAVEQLNSPKSPLMLSPVNVVKRSTLVRPMKFDDLQV 120

Query: 128 -------RSPLMLSPVKLVMHINHISTPRTPRVESCESESRLESLPMDLLVKVLCHLHHD 187
                  +SPLMLSP+ +VM    + TP+TP+ + C SES+LESLPMDLLVK++CHLHHD
Sbjct: 121 ESNNTCKKSPLMLSPMGIVMQNTLLRTPKTPQADPCVSESQLESLPMDLLVKIVCHLHHD 180

Query: 188 QLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVSKGDGKGFS 247
           QL+AVFHVSQRIR A ++ARQ+HFNYTTPDRSRQEMLR  TP P   WPF  +GDG    
Sbjct: 181 QLKAVFHVSQRIRMATILARQYHFNYTTPDRSRQEMLRVMTPVPINRWPF-RRGDGNPTM 240

Query: 248 LPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQ-ESGFPSRCMVPSVIPKP-LCKSLAS 274
           + SPHTPKAP+H PRPPSR K++EM+Q+ AVLFQ ++ FPSRC+VPSV+ +P L K +A 
Sbjct: 241 VSSPHTPKAPKHAPRPPSRTKLAEMKQITAVLFQDQTPFPSRCIVPSVLQRPTLFKPMAP 300

[Close]

BLAST of Cp4.1LG08g12890 vs. ExPASy Swiss-Prot
Match: O65416 (F-box protein SKIP27 OS=Arabidopsis thaliana OX=3702 GN=SKIP27 PE=1 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10
Identity = 56/168 (33.33%), Postives = 86/168 (51.19%), Query Frame = 0


Query: 3   KVKEGMGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRKRV 62
           KV E   E    +R +  L +R     S+ ++   G   +L    GSV +    LGRKR+
Sbjct: 18  KVVEWFSENLFLKRSTMALSKRGFVMTSNARF--HGEEEELELGLGSV-RFTRGLGRKRI 77

Query: 63  AVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESE-SRLESL 122
            +    +   + + +E  V   SP + S +K           R   V S  SE SRLE L
Sbjct: 78  LISSCVRESLSRSAVEIPVVSESPPVKSSLKR-------QRSRITIVSSSSSEKSRLECL 137

Query: 123 PMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSR 170
           P DLL++V+C + H+ L+++  VS+ IR+A L+A+  HF YTTP ++R
Sbjct: 138 PQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAKTLHFAYTTPKKTR 175

[Close]

BLAST of Cp4.1LG08g12890 vs. ExPASy Swiss-Prot
Match: Q8GX77 (F-box protein At1g61340 OS=Arabidopsis thaliana OX=3702 GN=At1g61340 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 9.3e-09
Identity = 27/57 (47.37%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 113 ESESR-LESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRS 169
           E +SR LE LP+D+LV+++C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+TP ++
Sbjct: 75  EGQSRELEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRKT 131

[Close]

BLAST of Cp4.1LG08g12890 vs. ExPASy Swiss-Prot
Match: Q9S9T6 (F-box protein At4g05010 OS=Arabidopsis thaliana OX=3702 GN=At4g05010 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.8e-08
Identity = 29/67 (43.28%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 101 ISTPRTPRVESCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHF 160
           +  P     ESC   S LE+L  D+L++VLCH+ H+ L  +  VS+ IRKAV+ A++ HF
Sbjct: 49  VKRPSHETTESC--RSLLETLHQDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKKSHF 108

Query: 161 NYTTPDR 168
           +Y+TP +
Sbjct: 109 DYSTPKK 113

[Close]

BLAST of Cp4.1LG08g12890 vs. NCBI nr
Match: XP_023538881.1 (F-box protein At4g35930 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 547 bits (1410), Expect = 2.21e-196
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MGKVKEGMGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRK 60
           MGKVKEGMGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRK
Sbjct: 1   MGKVKEGMGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRK 60

Query: 61  RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES 120
           RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES
Sbjct: 61  RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES 120

Query: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP 180
           LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP
Sbjct: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP 180

Query: 181 TEHWPFVSKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPSRCMV 240
           TEHWPFVSKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPSRCMV
Sbjct: 181 TEHWPFVSKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPSRCMV 240

Query: 241 PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR 274
           PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR
Sbjct: 241 PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR 274

[Close]

BLAST of Cp4.1LG08g12890 vs. NCBI nr
Match: XP_022943859.1 (F-box protein At4g35930 [Cucurbita moschata] >KAG6596254.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027800.1 F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 538 bits (1387), Expect = 7.11e-193
Identity = 269/274 (98.18%), Postives = 271/274 (98.91%), Query Frame = 0


Query: 1   MGKVKEGMGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRK 60
           MGKVKEGMGEAF NERESKKLKRRRR  GSSGKYLKPGAL+KLRCSKGSVGKSCTYLGRK
Sbjct: 1   MGKVKEGMGEAFSNERESKKLKRRRRAKGSSGKYLKPGALSKLRCSKGSVGKSCTYLGRK 60

Query: 61  RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES 120
           RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES
Sbjct: 61  RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES 120

Query: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP 180
           LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP
Sbjct: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP 180

Query: 181 TEHWPFVSKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPSRCMV 240
           TEHWPFVSKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQE+GFPSRCMV
Sbjct: 181 TEHWPFVSKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQETGFPSRCMV 240

Query: 241 PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR 274
           PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR
Sbjct: 241 PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR 274

[Close]

BLAST of Cp4.1LG08g12890 vs. NCBI nr
Match: XP_022971547.1 (F-box protein At4g35930 [Cucurbita maxima])

HSP 1 Score: 535 bits (1379), Expect = 1.18e-191
Identity = 267/274 (97.45%), Postives = 270/274 (98.54%), Query Frame = 0


Query: 1   MGKVKEGMGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRK 60
           MGKVKEGMG+AF NERESKKLKRRRR  GSSGKYLKPGAL+KLRCSKGSVGKSCTYLGRK
Sbjct: 1   MGKVKEGMGDAFSNERESKKLKRRRRAKGSSGKYLKPGALSKLRCSKGSVGKSCTYLGRK 60

Query: 61  RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES 120
           RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES
Sbjct: 61  RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES 120

Query: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP 180
           LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP
Sbjct: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP 180

Query: 181 TEHWPFVSKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPSRCMV 240
           TEHWPFVSKGDGKGFSLPSPH PKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFP+RCMV
Sbjct: 181 TEHWPFVSKGDGKGFSLPSPHAPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPARCMV 240

Query: 241 PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR 274
           PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR
Sbjct: 241 PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR 274

[Close]

BLAST of Cp4.1LG08g12890 vs. NCBI nr
Match: XP_004146154.1 (F-box protein At4g35930 [Cucumis sativus] >XP_031738005.1 F-box protein At4g35930 [Cucumis sativus] >KGN55645.1 hypothetical protein Csa_011427 [Cucumis sativus])

HSP 1 Score: 485 bits (1248), Expect = 8.15e-172
Identity = 243/267 (91.01%), Postives = 251/267 (94.01%), Query Frame = 0


Query: 8   MGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRKRVAVLDA 67
           MG+ F N+RE KKLKRRRR+ GS GKYLKPGALAKLRCSKGSV KSCT LGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 68  GKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLESLPMDLLV 127
           GKTKRN   LEDKVSDRSPLMLSPVKLVMHINHI TP+TPRVE CESESRLESLPMDLLV
Sbjct: 61  GKTKRNVV-LEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLV 120

Query: 128 KVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFV 187
           K+LCHLHHDQLRAVFHVSQRIRKAVL+ARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFV
Sbjct: 121 KILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFV 180

Query: 188 SKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPSRCMVPSVIPKP 247
           +KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQES FP RCMVPSVI KP
Sbjct: 181 NKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKP 240

Query: 248 LCKSLASNRVLFYEEELCQAVAQNKLR 274
           LCKSLASNRVLFYE+ELCQAVAQNKLR
Sbjct: 241 LCKSLASNRVLFYEDELCQAVAQNKLR 266

[Close]

BLAST of Cp4.1LG08g12890 vs. NCBI nr
Match: XP_008448525.1 (PREDICTED: F-box protein At4g35930 [Cucumis melo] >KAA0052947.1 F-box protein [Cucumis melo var. makuwa] >TYK11403.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 483 bits (1242), Expect = 6.69e-171
Identity = 241/267 (90.26%), Postives = 250/267 (93.63%), Query Frame = 0


Query: 8   MGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRKRVAVLDA 67
           MG+ F N+RE KKLKRRRR+ GS GKYLKPGALA+LRCSKGSV KSCT LGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 68  GKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLESLPMDLLV 127
           GK KRN   LEDKVSDRSPLMLSPVKLVMHINHI TP+TPRVE CESESRLESLPMDLLV
Sbjct: 61  GKAKRNGV-LEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLV 120

Query: 128 KVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFV 187
           K+LCHLHHDQLRAVFHVSQRIRKAVL+ARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFV
Sbjct: 121 KILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFV 180

Query: 188 SKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPSRCMVPSVIPKP 247
           +KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQES FP RCMVPSVI KP
Sbjct: 181 NKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKP 240

Query: 248 LCKSLASNRVLFYEEELCQAVAQNKLR 274
           LCKSLASNRVLFYE+ELCQAVAQNKLR
Sbjct: 241 LCKSLASNRVLFYEDELCQAVAQNKLR 266

[Close]

BLAST of Cp4.1LG08g12890 vs. ExPASy TrEMBL
Match: A0A6J1FVG9 (F-box protein At4g35930 OS=Cucurbita moschata OX=3662 GN=LOC111448461 PE=4 SV=1)

HSP 1 Score: 538 bits (1387), Expect = 3.44e-193
Identity = 269/274 (98.18%), Postives = 271/274 (98.91%), Query Frame = 0


Query: 1   MGKVKEGMGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRK 60
           MGKVKEGMGEAF NERESKKLKRRRR  GSSGKYLKPGAL+KLRCSKGSVGKSCTYLGRK
Sbjct: 1   MGKVKEGMGEAFSNERESKKLKRRRRAKGSSGKYLKPGALSKLRCSKGSVGKSCTYLGRK 60

Query: 61  RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES 120
           RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES
Sbjct: 61  RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES 120

Query: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP 180
           LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP
Sbjct: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP 180

Query: 181 TEHWPFVSKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPSRCMV 240
           TEHWPFVSKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQE+GFPSRCMV
Sbjct: 181 TEHWPFVSKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQETGFPSRCMV 240

Query: 241 PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR 274
           PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR
Sbjct: 241 PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR 274

[Close]

BLAST of Cp4.1LG08g12890 vs. ExPASy TrEMBL
Match: A0A6J1I293 (F-box protein At4g35930 OS=Cucurbita maxima OX=3661 GN=LOC111470231 PE=4 SV=1)

HSP 1 Score: 535 bits (1379), Expect = 5.71e-192
Identity = 267/274 (97.45%), Postives = 270/274 (98.54%), Query Frame = 0


Query: 1   MGKVKEGMGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRK 60
           MGKVKEGMG+AF NERESKKLKRRRR  GSSGKYLKPGAL+KLRCSKGSVGKSCTYLGRK
Sbjct: 1   MGKVKEGMGDAFSNERESKKLKRRRRAKGSSGKYLKPGALSKLRCSKGSVGKSCTYLGRK 60

Query: 61  RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES 120
           RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES
Sbjct: 61  RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES 120

Query: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP 180
           LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP
Sbjct: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP 180

Query: 181 TEHWPFVSKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPSRCMV 240
           TEHWPFVSKGDGKGFSLPSPH PKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFP+RCMV
Sbjct: 181 TEHWPFVSKGDGKGFSLPSPHAPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPARCMV 240

Query: 241 PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR 274
           PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR
Sbjct: 241 PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR 274

[Close]

BLAST of Cp4.1LG08g12890 vs. ExPASy TrEMBL
Match: A0A0A0L111 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002650 PE=4 SV=1)

HSP 1 Score: 485 bits (1248), Expect = 3.95e-172
Identity = 243/267 (91.01%), Postives = 251/267 (94.01%), Query Frame = 0


Query: 8   MGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRKRVAVLDA 67
           MG+ F N+RE KKLKRRRR+ GS GKYLKPGALAKLRCSKGSV KSCT LGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 68  GKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLESLPMDLLV 127
           GKTKRN   LEDKVSDRSPLMLSPVKLVMHINHI TP+TPRVE CESESRLESLPMDLLV
Sbjct: 61  GKTKRNVV-LEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLV 120

Query: 128 KVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFV 187
           K+LCHLHHDQLRAVFHVSQRIRKAVL+ARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFV
Sbjct: 121 KILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFV 180

Query: 188 SKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPSRCMVPSVIPKP 247
           +KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQES FP RCMVPSVI KP
Sbjct: 181 NKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKP 240

Query: 248 LCKSLASNRVLFYEEELCQAVAQNKLR 274
           LCKSLASNRVLFYE+ELCQAVAQNKLR
Sbjct: 241 LCKSLASNRVLFYEDELCQAVAQNKLR 266

[Close]

BLAST of Cp4.1LG08g12890 vs. ExPASy TrEMBL
Match: A0A5A7UEK6 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00560 PE=4 SV=1)

HSP 1 Score: 483 bits (1242), Expect = 3.24e-171
Identity = 241/267 (90.26%), Postives = 250/267 (93.63%), Query Frame = 0


Query: 8   MGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRKRVAVLDA 67
           MG+ F N+RE KKLKRRRR+ GS GKYLKPGALA+LRCSKGSV KSCT LGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 68  GKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLESLPMDLLV 127
           GK KRN   LEDKVSDRSPLMLSPVKLVMHINHI TP+TPRVE CESESRLESLPMDLLV
Sbjct: 61  GKAKRNGV-LEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLV 120

Query: 128 KVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFV 187
           K+LCHLHHDQLRAVFHVSQRIRKAVL+ARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFV
Sbjct: 121 KILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFV 180

Query: 188 SKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPSRCMVPSVIPKP 247
           +KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQES FP RCMVPSVI KP
Sbjct: 181 NKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKP 240

Query: 248 LCKSLASNRVLFYEEELCQAVAQNKLR 274
           LCKSLASNRVLFYE+ELCQAVAQNKLR
Sbjct: 241 LCKSLASNRVLFYEDELCQAVAQNKLR 266

[Close]

BLAST of Cp4.1LG08g12890 vs. ExPASy TrEMBL
Match: A0A1S3BKS0 (F-box protein At4g35930 OS=Cucumis melo OX=3656 GN=LOC103490677 PE=4 SV=1)

HSP 1 Score: 483 bits (1242), Expect = 3.24e-171
Identity = 241/267 (90.26%), Postives = 250/267 (93.63%), Query Frame = 0


Query: 8   MGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRKRVAVLDA 67
           MG+ F N+RE KKLKRRRR+ GS GKYLKPGALA+LRCSKGSV KSCT LGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 68  GKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLESLPMDLLV 127
           GK KRN   LEDKVSDRSPLMLSPVKLVMHINHI TP+TPRVE CESESRLESLPMDLLV
Sbjct: 61  GKAKRNGV-LEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLV 120

Query: 128 KVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFV 187
           K+LCHLHHDQLRAVFHVSQRIRKAVL+ARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFV
Sbjct: 121 KILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFV 180

Query: 188 SKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPSRCMVPSVIPKP 247
           +KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQES FP RCMVPSVI KP
Sbjct: 181 NKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKP 240

Query: 248 LCKSLASNRVLFYEEELCQAVAQNKLR 274
           LCKSLASNRVLFYE+ELCQAVAQNKLR
Sbjct: 241 LCKSLASNRVLFYEDELCQAVAQNKLR 266

[Close]

BLAST of Cp4.1LG08g12890 vs. TAIR 10
Match: AT4G35930.1 (F-box family protein )

HSP 1 Score: 280.4 bits (716), Expect = 1.5e-75
Identity = 162/321 (50.47%), Postives = 203/321 (63.24%), Query Frame = 0


Query: 8   MGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRKRVAVLDA 67
           MG+    + +SK   R+++   SS KYLKPGAL +L  SK S  KSC  LG+KRV V D 
Sbjct: 1   MGKVSPKDLDSKTSVRKKKLKSSSNKYLKPGALVQLCYSKASAAKSCNELGKKRVPVFDT 60

Query: 68  ------GKTK---------RNNAGLEDKVSD----------------------------- 127
                 GK +         RNN    ++++                              
Sbjct: 61  KSCNDLGKKRVPVFDIKHARNNKMAVEQLNSPKSPLMLSPVNVVKRSTLVRPMKFDDLQV 120

Query: 128 -------RSPLMLSPVKLVMHINHISTPRTPRVESCESESRLESLPMDLLVKVLCHLHHD 187
                  +SPLMLSP+ +VM    + TP+TP+ + C SES+LESLPMDLLVK++CHLHHD
Sbjct: 121 ESNNTCKKSPLMLSPMGIVMQNTLLRTPKTPQADPCVSESQLESLPMDLLVKIVCHLHHD 180

Query: 188 QLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVSKGDGKGFS 247
           QL+AVFHVSQRIR A ++ARQ+HFNYTTPDRSRQEMLR  TP P   WPF  +GDG    
Sbjct: 181 QLKAVFHVSQRIRMATILARQYHFNYTTPDRSRQEMLRVMTPVPINRWPF-RRGDGNPTM 240

Query: 248 LPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQ-ESGFPSRCMVPSVIPKP-LCKSLAS 274
           + SPHTPKAP+H PRPPSR K++EM+Q+ AVLFQ ++ FPSRC+VPSV+ +P L K +A 
Sbjct: 241 VSSPHTPKAPKHAPRPPSRTKLAEMKQITAVLFQDQTPFPSRCIVPSVLQRPTLFKPMAP 300

[Close]

BLAST of Cp4.1LG08g12890 vs. TAIR 10
Match: AT4G21510.1 (F-box family protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-11
Identity = 56/168 (33.33%), Postives = 86/168 (51.19%), Query Frame = 0


Query: 3   KVKEGMGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRKRV 62
           KV E   E    +R +  L +R     S+ ++   G   +L    GSV +    LGRKR+
Sbjct: 18  KVVEWFSENLFLKRSTMALSKRGFVMTSNARF--HGEEEELELGLGSV-RFTRGLGRKRI 77

Query: 63  AVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESE-SRLESL 122
            +    +   + + +E  V   SP + S +K           R   V S  SE SRLE L
Sbjct: 78  LISSCVRESLSRSAVEIPVVSESPPVKSSLKR-------QRSRITIVSSSSSEKSRLECL 137

Query: 123 PMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSR 170
           P DLL++V+C + H+ L+++  VS+ IR+A L+A+  HF YTTP ++R
Sbjct: 138 PQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAKTLHFAYTTPKKTR 175

[Close]

BLAST of Cp4.1LG08g12890 vs. TAIR 10
Match: AT1G61340.1 (F-box family protein )

HSP 1 Score: 62.4 bits (150), Expect = 6.6e-10
Identity = 27/57 (47.37%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 113 ESESR-LESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRS 169
           E +SR LE LP+D+LV+++C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+TP ++
Sbjct: 75  EGQSRELEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRKT 131

[Close]

BLAST of Cp4.1LG08g12890 vs. TAIR 10
Match: AT4G05010.1 (F-box family protein )

HSP 1 Score: 59.3 bits (142), Expect = 5.6e-09
Identity = 29/67 (43.28%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 101 ISTPRTPRVESCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHF 160
           +  P     ESC   S LE+L  D+L++VLCH+ H+ L  +  VS+ IRKAV+ A++ HF
Sbjct: 49  VKRPSHETTESC--RSLLETLHQDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKKSHF 108

Query: 161 NYTTPDR 168
           +Y+TP +
Sbjct: 109 DYSTPKK 113

[Close]

BLAST of Cp4.1LG08g12890 vs. TAIR 10
Match: AT1G61340.2 (F-box family protein )

HSP 1 Score: 48.9 bits (115), Expect = 7.5e-06
Identity = 18/44 (40.91%), Postives = 35/44 (79.55%), Query Frame = 0


Query: 125 LLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRS 169
           ++V+++C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+TP ++
Sbjct: 134 VIVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRKT 177

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g12890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XF11	2.2e-74	50.47	F-box protein At4g35930 OS=Arabidopsis thaliana OX=3702 GN=At4g35930 PE=2 SV=1	[more]
O65416	1.7e-10	33.33	F-box protein SKIP27 OS=Arabidopsis thaliana OX=3702 GN=SKIP27 PE=1 SV=2	[more]
Q8GX77	9.3e-09	47.37	F-box protein At1g61340 OS=Arabidopsis thaliana OX=3702 GN=At1g61340 PE=2 SV=1	[more]
Q9S9T6	7.8e-08	43.28	F-box protein At4g05010 OS=Arabidopsis thaliana OX=3702 GN=At4g05010 PE=2 SV=1	[more]

BLAST of Cp4.1LG08g12890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538881.1	2.21e-196	100.00	F-box protein At4g35930 [Cucurbita pepo subsp. pepo]	[more]
XP_022943859.1	7.11e-193	98.18	F-box protein At4g35930 [Cucurbita moschata] >KAG6596254.1 F-box protein, partia...	[more]
XP_022971547.1	1.18e-191	97.45	F-box protein At4g35930 [Cucurbita maxima]	[more]
XP_004146154.1	8.15e-172	91.01	F-box protein At4g35930 [Cucumis sativus] >XP_031738005.1 F-box protein At4g3593...	[more]
XP_008448525.1	6.69e-171	90.26	PREDICTED: F-box protein At4g35930 [Cucumis melo] >KAA0052947.1 F-box protein [C...	[more]

BLAST of Cp4.1LG08g12890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVG9	3.44e-193	98.18	F-box protein At4g35930 OS=Cucurbita moschata OX=3662 GN=LOC111448461 PE=4 SV=1	[more]
A0A6J1I293	5.71e-192	97.45	F-box protein At4g35930 OS=Cucurbita maxima OX=3661 GN=LOC111470231 PE=4 SV=1	[more]
A0A0A0L111	3.95e-172	91.01	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002650 PE=4 ...	[more]
A0A5A7UEK6	3.24e-171	90.26	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00560 ...	[more]
A0A1S3BKS0	3.24e-171	90.26	F-box protein At4g35930 OS=Cucumis melo OX=3656 GN=LOC103490677 PE=4 SV=1	[more]

BLAST of Cp4.1LG08g12890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35930.1	1.5e-75	50.47	F-box family protein	[more]
AT4G21510.1	1.2e-11	33.33	F-box family protein	[more]
AT1G61340.1	6.6e-10	47.37	F-box family protein	[more]
AT4G05010.1	5.6e-09	43.28	F-box family protein	[more]
AT1G61340.2	7.5e-06	40.91	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..215
None	No IPR available	PANTHER	PTHR34049	F-BOX PROTEIN SKIP27	coord: 8..274
None	No IPR available	PANTHER	PTHR34049:SF2	F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 8..274
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 115..163 score: 8.83511
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 107..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g12890.1	Cp4.1LG08g12890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding