Cp4.1LG08g12740 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g12740
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	C2H2-type domain-containing protein
Location	Cp4.1LG08: 9285380 .. 9286069 (+)
RNA-Seq Expression	Cp4.1LG08g12740
Synteny	Cp4.1LG08g12740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGAACGCCAATACCAATGTCCCACCGGAGACCTCTTCCGACCAACGCCACGGCGGAGAAAGGTCTCCGACGGGGCCGACTTCTCCTCAACCAACTCACAACCGCGACAATAACCCTAACCCCACAACGGAACACTCATCCTACTCCGACAGGCTACCAGTACCTCCCGCCGCCGAGACTAGTCGGCGGGATGGCCTGTTCGATGTCGGAACGTCGTACGAGAACATCGTAGGAAGTTCCGAGGGCGAGCCAGGGAAAAAGAGAGGACGAGGTGGGGGAGAAGAGGAGGAGGAGCAGCAGCCGCCGCCGCAGCAGGTGAAAGCTGCAAAGAAGAAAGGGGAGCTGACGGAGGTTCCAAAAGGGGAGCCTAGATGTGCGACTTGCAACAAAGTGTTCAAATCGTGGAAAGCACTTTTTGGGCACTTGAGGTCTCACCCGGAACGGACCTACCGTGGGGCTCTTCCGCCACCAACCGCCGCAGAGCTCGACATTCGCCGCTGTCAGCAACAGCTCGCTTCCACTTTGCTGACTGTGGCTCAGGAAGTGGCGGCGTCGCGAAGAGGGCTGGATATTGATCTCAACCAACCCTCCACTGCTGACGACGGTGACTCGCCGGAGAAGACCGGCGGCGTGGGGTTCGATCTGAACGCCGATCCGCCGCCGGGAAGTGATGACGAGGACTGA

mRNA sequence

ATGGAGAAGAACGCCAATACCAATGTCCCACCGGAGACCTCTTCCGACCAACGCCACGGCGGAGAAAGGTCTCCGACGGGGCCGACTTCTCCTCAACCAACTCACAACCGCGACAATAACCCTAACCCCACAACGGAACACTCATCCTACTCCGACAGGCTACCAGTACCTCCCGCCGCCGAGACTAGTCGGCGGGATGGCCTGTTCGATGTCGGAACGTCGTACGAGAACATCGTAGGAAGTTCCGAGGGCGAGCCAGGGAAAAAGAGAGGACGAGGTGGGGGAGAAGAGGAGGAGGAGCAGCAGCCGCCGCCGCAGCAGGTGAAAGCTGCAAAGAAGAAAGGGGAGCTGACGGAGGTTCCAAAAGGGGAGCCTAGATGTGCGACTTGCAACAAAGTGTTCAAATCGTGGAAAGCACTTTTTGGGCACTTGAGGTCTCACCCGGAACGGACCTACCGTGGGGCTCTTCCGCCACCAACCGCCGCAGAGCTCGACATTCGCCGCTGTCAGCAACAGCTCGCTTCCACTTTGCTGACTGTGGCTCAGGAAGTGGCGGCGTCGCGAAGAGGGCTGGATATTGATCTCAACCAACCCTCCACTGCTGACGACGGTGACTCGCCGGAGAAGACCGGCGGCGTGGGGTTCGATCTGAACGCCGATCCGCCGCCGGGAAGTGATGACGAGGACTGA

Coding sequence (CDS)

ATGGAGAAGAACGCCAATACCAATGTCCCACCGGAGACCTCTTCCGACCAACGCCACGGCGGAGAAAGGTCTCCGACGGGGCCGACTTCTCCTCAACCAACTCACAACCGCGACAATAACCCTAACCCCACAACGGAACACTCATCCTACTCCGACAGGCTACCAGTACCTCCCGCCGCCGAGACTAGTCGGCGGGATGGCCTGTTCGATGTCGGAACGTCGTACGAGAACATCGTAGGAAGTTCCGAGGGCGAGCCAGGGAAAAAGAGAGGACGAGGTGGGGGAGAAGAGGAGGAGGAGCAGCAGCCGCCGCCGCAGCAGGTGAAAGCTGCAAAGAAGAAAGGGGAGCTGACGGAGGTTCCAAAAGGGGAGCCTAGATGTGCGACTTGCAACAAAGTGTTCAAATCGTGGAAAGCACTTTTTGGGCACTTGAGGTCTCACCCGGAACGGACCTACCGTGGGGCTCTTCCGCCACCAACCGCCGCAGAGCTCGACATTCGCCGCTGTCAGCAACAGCTCGCTTCCACTTTGCTGACTGTGGCTCAGGAAGTGGCGGCGTCGCGAAGAGGGCTGGATATTGATCTCAACCAACCCTCCACTGCTGACGACGGTGACTCGCCGGAGAAGACCGGCGGCGTGGGGTTCGATCTGAACGCCGATCCGCCGCCGGGAAGTGATGACGAGGACTGA

Protein sequence

MEKNANTNVPPETSSDQRHGGERSPTGPTSPQPTHNRDNNPNPTTEHSSYSDRLPVPPAAETSRRDGLFDVGTSYENIVGSSEGEPGKKRGRGGGEEEEEQQPPPQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTVAQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADPPPGSDDED

Homology

[Close]

BLAST of Cp4.1LG08g12740 vs. ExPASy Swiss-Prot
Match: O65499 (Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-06
Identity = 40/115 (34.78%), Postives = 54/115 (46.96%), Query Frame = 0


Query: 49  SYSDR---LPVPPAAETSRRDGL-FDVGTSYENIVGSSEGEPGKKRGRGGGEEEEEQQPP 108
           SY DR   +P+ P+  ++    L F + +SY++        P KKR +            
Sbjct: 6   SYDDRSFHIPLHPSNTSNPNPNLQFALSSSYDH-------SPKKKRTKTVASSSSSSPKS 65

Query: 109 PQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPP 160
             + K  KK       PK    C  C + F SWKALFGH+R HPER +RG  PPP
Sbjct: 66  ASKPKYTKKPD--PNAPKITRPCTECGRKFWSWKALFGHMRCHPERQWRGINPPP 111

[Close]

BLAST of Cp4.1LG08g12740 vs. NCBI nr
Match: XP_023539548.1 (uncharacterized protein LOC111800191 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451 bits (1161), Expect = 6.29e-160
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MEKNANTNVPPETSSDQRHGGERSPTGPTSPQPTHNRDNNPNPTTEHSSYSDRLPVPPAA 60
           MEKNANTNVPPETSSDQRHGGERSPTGPTSPQPTHNRDNNPNPTTEHSSYSDRLPVPPAA
Sbjct: 1   MEKNANTNVPPETSSDQRHGGERSPTGPTSPQPTHNRDNNPNPTTEHSSYSDRLPVPPAA 60

Query: 61  ETSRRDGLFDVGTSYENIVGSSEGEPGKKRGRGGGEEEEEQQPPPQQVKAAKKKGELTEV 120
           ETSRRDGLFDVGTSYENIVGSSEGEPGKKRGRGGGEEEEEQQPPPQQVKAAKKKGELTEV
Sbjct: 61  ETSRRDGLFDVGTSYENIVGSSEGEPGKKRGRGGGEEEEEQQPPPQQVKAAKKKGELTEV 120

Query: 121 PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV 180
           PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV
Sbjct: 121 PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV 180

Query: 181 AQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADPPPGSDDED 229
           AQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADPPPGSDDED
Sbjct: 181 AQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADPPPGSDDED 229

[Close]

BLAST of Cp4.1LG08g12740 vs. NCBI nr
Match: KAG6596278.1 (Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 423 bits (1088), Expect = 9.10e-149
Identity = 219/231 (94.81%), Postives = 221/231 (95.67%), Query Frame = 0


Query: 1   MEKNANTNVPPETSSDQRHGGERSPTGPTSPQPTHNRDNNPNPTTEHSSYSDRLPVPPAA 60
           MEKNANTNVPPETSSDQRHGGERSPTGPTS  PTHNRDNNPNPTTEHSSYSDRLPVPPAA
Sbjct: 1   MEKNANTNVPPETSSDQRHGGERSPTGPTSSPPTHNRDNNPNPTTEHSSYSDRLPVPPAA 60

Query: 61  ETSRRDGLFDVGTSYENIVGSSEGEPGKKRGRGGGEEEEEQQPPPQQ--VKAAKKKGELT 120
           ET+RRD L DVGTSYEN+VGSSEGEPGKKRGRG GEEEEEQQ PPQQ  VKAAKKKGELT
Sbjct: 61  ETNRRDALLDVGTSYENVVGSSEGEPGKKRGRGDGEEEEEQQQPPQQQQVKAAKKKGELT 120

Query: 121 EVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLL 180
           EVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLL
Sbjct: 121 EVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLL 180

Query: 181 TVAQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADPPPGSDDED 229
           TVAQEVAASRRGLDIDLNQPSTADDG SPEKTGGVGFDLNADPPP SDDED
Sbjct: 181 TVAQEVAASRRGLDIDLNQPSTADDGHSPEKTGGVGFDLNADPPPESDDED 231

[Close]

BLAST of Cp4.1LG08g12740 vs. NCBI nr
Match: XP_022962440.1 (uncharacterized protein LOC111462854 [Cucurbita moschata])

HSP 1 Score: 421 bits (1082), Expect = 7.21e-148
Identity = 219/230 (95.22%), Postives = 220/230 (95.65%), Query Frame = 0


Query: 1   MEKNANTNVPPETSSDQRHGGERSPTGPTSPQPTHNRDNNPNPTTEHSSYSDRLPVPPAA 60
           MEKNANTNVP ETSSDQRHGGERSPTGPTSP PTHNRDNNPNPTTEHSSYSD L VPPAA
Sbjct: 1   MEKNANTNVPSETSSDQRHGGERSPTGPTSPPPTHNRDNNPNPTTEHSSYSDTLRVPPAA 60

Query: 61  ETSRRDGLFDVGTSYENIVGSSEGEPGKKRGRGGGEEEEEQQPPPQQ-VKAAKKKGELTE 120
           ETSRRD L DVGTSY+NIVGSSEGEPGKKRGRG GEEEEEQQ PPQQ VKAAKKKGELTE
Sbjct: 61  ETSRRDALLDVGTSYQNIVGSSEGEPGKKRGRGDGEEEEEQQQPPQQQVKAAKKKGELTE 120

Query: 121 VPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLT 180
           VPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLT
Sbjct: 121 VPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLT 180

Query: 181 VAQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADPPPGSDDED 229
           VAQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADPPP SDDED
Sbjct: 181 VAQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADPPPESDDED 230

[Close]

BLAST of Cp4.1LG08g12740 vs. NCBI nr
Match: KAG7027829.1 (Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 421 bits (1082), Expect = 7.75e-148
Identity = 219/232 (94.40%), Postives = 220/232 (94.83%), Query Frame = 0


Query: 1   MEKNANTNVPPETSSDQRHGGERSPTGPTSPQPTHNRDNNPNPTTEHSSYSDRLPVPPAA 60
           MEKNANTNVPPETSSDQRHGGERSPTGPTS  PTHNRDNNPNPTTEHSSYSDRLPVPPAA
Sbjct: 1   MEKNANTNVPPETSSDQRHGGERSPTGPTSSPPTHNRDNNPNPTTEHSSYSDRLPVPPAA 60

Query: 61  ETSRRDGLFDVGTSYENIVGSSEGEPGKKRGRGGGEEEEEQQPPP---QQVKAAKKKGEL 120
           ETSRRD L DVGTSYEN+VGSSEGEPGKKRGRG GEEEEEQQ  P   QQVKAAKKKGEL
Sbjct: 61  ETSRRDALLDVGTSYENVVGSSEGEPGKKRGRGDGEEEEEQQQQPPQQQQVKAAKKKGEL 120

Query: 121 TEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTL 180
           TEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTL
Sbjct: 121 TEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTL 180

Query: 181 LTVAQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADPPPGSDDED 229
           LTVAQEVAASRRGLDIDLNQPSTADDG SPEKTGGVGFDLNADPPP SDDED
Sbjct: 181 LTVAQEVAASRRGLDIDLNQPSTADDGHSPEKTGGVGFDLNADPPPESDDED 232

[Close]

BLAST of Cp4.1LG08g12740 vs. NCBI nr
Match: XP_022971305.1 (uncharacterized protein LOC111470063 [Cucurbita maxima])

HSP 1 Score: 417 bits (1071), Expect = 3.30e-146
Identity = 213/229 (93.01%), Postives = 218/229 (95.20%), Query Frame = 0


Query: 1   MEKNANTNVPPETSSDQRHGGERSPTGPTSPQPTHNRDNNPNPTTEHSSYSDRLPVPPAA 60
           MEKNANTNVPPETSSDQ HGGERSPTGPTSP PTHNRDNNPNPTT HSSYSD L VPPAA
Sbjct: 1   MEKNANTNVPPETSSDQCHGGERSPTGPTSPPPTHNRDNNPNPTTGHSSYSDTLLVPPAA 60

Query: 61  ETSRRDGLFDVGTSYENIVGSSEGEPGKKRGRGGGEEEEEQQPPPQQVKAAKKKGELTEV 120
           +TSRRD L D+GTSYEN+VGSS+GEPGKKRGRG GEEEEE+Q P QQVKAAKKKGELTEV
Sbjct: 61  DTSRRDALLDIGTSYENVVGSSDGEPGKKRGRGDGEEEEEEQQPQQQVKAAKKKGELTEV 120

Query: 121 PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV 180
           PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV
Sbjct: 121 PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV 180

Query: 181 AQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADPPPGSDDED 229
           AQEVAASRRGLDIDLNQPSTADDGD PEKTGGVGFDLNADPPPGSDDED
Sbjct: 181 AQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNADPPPGSDDED 229

[Close]

BLAST of Cp4.1LG08g12740 vs. ExPASy TrEMBL
Match: A0A6J1HF26 (uncharacterized protein LOC111462854 OS=Cucurbita moschata OX=3662 GN=LOC111462854 PE=4 SV=1)

HSP 1 Score: 421 bits (1082), Expect = 3.49e-148
Identity = 219/230 (95.22%), Postives = 220/230 (95.65%), Query Frame = 0


Query: 1   MEKNANTNVPPETSSDQRHGGERSPTGPTSPQPTHNRDNNPNPTTEHSSYSDRLPVPPAA 60
           MEKNANTNVP ETSSDQRHGGERSPTGPTSP PTHNRDNNPNPTTEHSSYSD L VPPAA
Sbjct: 1   MEKNANTNVPSETSSDQRHGGERSPTGPTSPPPTHNRDNNPNPTTEHSSYSDTLRVPPAA 60

Query: 61  ETSRRDGLFDVGTSYENIVGSSEGEPGKKRGRGGGEEEEEQQPPPQQ-VKAAKKKGELTE 120
           ETSRRD L DVGTSY+NIVGSSEGEPGKKRGRG GEEEEEQQ PPQQ VKAAKKKGELTE
Sbjct: 61  ETSRRDALLDVGTSYQNIVGSSEGEPGKKRGRGDGEEEEEQQQPPQQQVKAAKKKGELTE 120

Query: 121 VPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLT 180
           VPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLT
Sbjct: 121 VPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLT 180

Query: 181 VAQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADPPPGSDDED 229
           VAQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADPPP SDDED
Sbjct: 181 VAQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADPPPESDDED 230

[Close]

BLAST of Cp4.1LG08g12740 vs. ExPASy TrEMBL
Match: A0A6J1I5D3 (uncharacterized protein LOC111470063 OS=Cucurbita maxima OX=3661 GN=LOC111470063 PE=4 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 1.60e-146
Identity = 213/229 (93.01%), Postives = 218/229 (95.20%), Query Frame = 0


Query: 1   MEKNANTNVPPETSSDQRHGGERSPTGPTSPQPTHNRDNNPNPTTEHSSYSDRLPVPPAA 60
           MEKNANTNVPPETSSDQ HGGERSPTGPTSP PTHNRDNNPNPTT HSSYSD L VPPAA
Sbjct: 1   MEKNANTNVPPETSSDQCHGGERSPTGPTSPPPTHNRDNNPNPTTGHSSYSDTLLVPPAA 60

Query: 61  ETSRRDGLFDVGTSYENIVGSSEGEPGKKRGRGGGEEEEEQQPPPQQVKAAKKKGELTEV 120
           +TSRRD L D+GTSYEN+VGSS+GEPGKKRGRG GEEEEE+Q P QQVKAAKKKGELTEV
Sbjct: 61  DTSRRDALLDIGTSYENVVGSSDGEPGKKRGRGDGEEEEEEQQPQQQVKAAKKKGELTEV 120

Query: 121 PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV 180
           PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV
Sbjct: 121 PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV 180

Query: 181 AQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADPPPGSDDED 229
           AQEVAASRRGLDIDLNQPSTADDGD PEKTGGVGFDLNADPPPGSDDED
Sbjct: 181 AQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNADPPPGSDDED 229

[Close]

BLAST of Cp4.1LG08g12740 vs. ExPASy TrEMBL
Match: A0A5D3CLS0 (Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00180 PE=4 SV=1)

HSP 1 Score: 280 bits (717), Expect = 1.96e-92
Identity = 166/247 (67.21%), Postives = 181/247 (73.28%), Query Frame = 0


Query: 1   MEKNANTNVPP----------ETSSDQRHGGERSPTGPTSPQPTHNRD--NNPNPTTEHS 60
           MEKN NTN             ETS DQRHGGERSP   +   P  N D  NNP       
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHGGERSPMAASPLPPARNIDDINNPPTVVIEP 60

Query: 61  SYSDRLPVPPAA---ETSRR---DGLFDVGTS-YENIVGSSEGEPGKKRGRGGGEEEEEQ 120
           S S  +  P +A   +  RR   D +FDVGTS +E++ GSS+ E GKKRGRG G E++  
Sbjct: 61  SSSTLVAAPESATPGDVRRRQSVDAMFDVGTSSHEHVGGSSDAEAGKKRGRGDGGEQQ-- 120

Query: 121 QPPPQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTA 180
               QQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTA
Sbjct: 121 ----QQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTA 180

Query: 181 AELDIRRCQQQLASTLLTVAQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADP 228
           AELDIRRCQQQLASTLLTVAQ+VAA+RRGLDIDLNQPSTADDGDSP+ T   GFDLN +P
Sbjct: 181 AELDIRRCQQQLASTLLTVAQQVAATRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEP 240

[Close]

BLAST of Cp4.1LG08g12740 vs. ExPASy TrEMBL
Match: A0A1S3BLF2 (uncharacterized protein LOC103491103 OS=Cucumis melo OX=3656 GN=LOC103491103 PE=4 SV=1)

HSP 1 Score: 280 bits (717), Expect = 1.96e-92
Identity = 166/247 (67.21%), Postives = 181/247 (73.28%), Query Frame = 0


Query: 1   MEKNANTNVPP----------ETSSDQRHGGERSPTGPTSPQPTHNRD--NNPNPTTEHS 60
           MEKN NTN             ETS DQRHGGERSP   +   P  N D  NNP       
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHGGERSPMAASPLPPARNIDDINNPPTVVIEP 60

Query: 61  SYSDRLPVPPAA---ETSRR---DGLFDVGTS-YENIVGSSEGEPGKKRGRGGGEEEEEQ 120
           S S  +  P +A   +  RR   D +FDVGTS +E++ GSS+ E GKKRGRG G E++  
Sbjct: 61  SSSTLVAAPESATPGDVRRRQSVDAMFDVGTSSHEHVGGSSDAEAGKKRGRGDGGEQQ-- 120

Query: 121 QPPPQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTA 180
               QQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTA
Sbjct: 121 ----QQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTA 180

Query: 181 AELDIRRCQQQLASTLLTVAQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADP 228
           AELDIRRCQQQLASTLLTVAQ+VAA+RRGLDIDLNQPSTADDGDSP+ T   GFDLN +P
Sbjct: 181 AELDIRRCQQQLASTLLTVAQQVAATRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEP 240

[Close]

BLAST of Cp4.1LG08g12740 vs. ExPASy TrEMBL
Match: A0A0A0L0X7 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G001720 PE=4 SV=1)

HSP 1 Score: 270 bits (691), Expect = 1.75e-88
Identity = 160/247 (64.78%), Postives = 176/247 (71.26%), Query Frame = 0


Query: 1   MEKNANTNVPP----------ETSSDQRHGGERSPTGPTSPQPTHNRDNNPNPTTEHSSY 60
           MEKN NTN             ETS DQRH  ERSP   + P P    D+  NP T+    
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP 60

Query: 61  SDRLPVPPAAETSRRD--------GLFDVGTS-YENIVGSSEGEPGKKRGRGGGEEEEEQ 120
           S  + V      +  D         +FDVGTS +E++ GSS+ E GKKRGRG G E++  
Sbjct: 61  SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQ-- 120

Query: 121 QPPPQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTA 180
               QQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTA
Sbjct: 121 ----QQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTA 180

Query: 181 AELDIRRCQQQLASTLLTVAQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADP 228
           AELDIRRCQQQLASTLLTVAQ+V+ASRRGLDIDLNQPSTADDGDSP+ T   GFDLN +P
Sbjct: 181 AELDIRRCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEP 240

[Close]

BLAST of Cp4.1LG08g12740 vs. TAIR 10
Match: AT4G35700.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 75.9 bits (185), Expect = 4.8e-14
Identity = 59/152 (38.82%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 108 VKAAKKKG--ELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPT--AAE 167
           VK  +KKG  +LT +P+G P C  C K F SWKA+FGHLR H +R Y G LPPPT  AAE
Sbjct: 123 VKKPRKKGSTQLTHLPQGPPMCNVCGKGFASWKAVFGHLRQHKDRGYLGFLPPPTFNAAE 182

Query: 168 LDI----RRCQQQLASTLLTVAQEVAASRRG------------------LDIDLNQPSTA 227
                          +T ++V +   AS  G                    IDLN    A
Sbjct: 183 EGFGGVATASTGGAVATAISVGEVPTASSAGGLATASSDGEGLVSSIGRARIDLN----A 242

Query: 228 DDGDSPEKTGGVG----FDLNADPPPGSDDED 230
           D  +  +K  GVG    FDLN  PPP  D+E+
Sbjct: 243 DPVEEEDKVIGVGSKRKFDLNRSPPPDGDEEN 270

[Close]

BLAST of Cp4.1LG08g12740 vs. TAIR 10
Match: AT4G35610.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.9e-11
Identity = 55/149 (36.91%), Postives = 72/149 (48.32%), Query Frame = 0


Query: 80  GSSEGEPGKKRGRGGGEEEEEQQ--PPPQQVKAAKKKGELTEVPKGEPRCATCNKVFKSW 139
           GS  G   K R R   + ++E       +  K  KK  ELT  PKG P C  C + F SW
Sbjct: 91  GSGSGGKKKSRPRISTQTDDEGDGLGEGEAKKPKKKAKELTHPPKGPPVCHICGRGFGSW 150

Query: 140 KALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTVAQEVAASRRGLDI---D 199
           KA+FGH+R+H +R Y+G LPPPT +    R     L S   T+A     S  G+ +    
Sbjct: 151 KAVFGHMRAHRDRNYQGFLPPPTFSAGAERFVIPGLRSA-FTIATVGGGSSGGVAVGGRS 210

Query: 200 LNQPSTADDGDSPEKTG--GVGFDLNADP 222
               S +  GD+P   G  G G DLN +P
Sbjct: 211 SGDFSGSGGGDAPGSEGGRGSGIDLNVEP 238

[Close]

BLAST of Cp4.1LG08g12740 vs. TAIR 10
Match: AT4G35280.1 (C2H2-like zinc finger protein )

HSP 1 Score: 55.1 bits (131), Expect = 8.8e-08
Identity = 40/115 (34.78%), Postives = 54/115 (46.96%), Query Frame = 0


Query: 49  SYSDR---LPVPPAAETSRRDGL-FDVGTSYENIVGSSEGEPGKKRGRGGGEEEEEQQPP 108
           SY DR   +P+ P+  ++    L F + +SY++        P KKR +            
Sbjct: 6   SYDDRSFHIPLHPSNTSNPNPNLQFALSSSYDH-------SPKKKRTKTVASSSSSSPKS 65

Query: 109 PQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPP 160
             + K  KK       PK    C  C + F SWKALFGH+R HPER +RG  PPP
Sbjct: 66  ASKPKYTKKPD--PNAPKITRPCTECGRKFWSWKALFGHMRCHPERQWRGINPPP 111

[Close]

BLAST of Cp4.1LG08g12740 vs. TAIR 10
Match: AT2G26940.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.6e-07
Identity = 19/45 (42.22%), Postives = 32/45 (71.11%), Query Frame = 0


Query: 122 KGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI 167
           +G+ RC  C K F++  +LFGH+R HP+RT++G  PPP + + ++
Sbjct: 116 EGKIRCCLCGKEFQTMHSLFGHMRRHPDRTWKGIRPPPPSEKFNL 160

[Close]

BLAST of Cp4.1LG08g12740 vs. TAIR 10
Match: AT5G56200.1 (C2H2 type zinc finger transcription factor family )

HSP 1 Score: 49.7 bits (117), Expect = 3.7e-06
Identity = 29/85 (34.12%), Postives = 41/85 (48.24%), Query Frame = 0


Query: 124 EPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTVAQE 183
           E  C  C K F S KAL+GH+R HP+R ++G LPPP      +       +S+ L    E
Sbjct: 129 EVACCVCYKKFTSMKALYGHMRFHPDRGWKGVLPPPPLLPHPLGNS----SSSTLDHDDE 188

Query: 184 VAASRRGLDIDLNQPSTADDGDSPE 209
             +S    D D +     DD ++ E
Sbjct: 189 FISSDYDDDDDFDDDDDDDDDENSE 209

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g12740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65499	1.2e-06	34.78	Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1	[more]

BLAST of Cp4.1LG08g12740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539548.1	6.29e-160	100.00	uncharacterized protein LOC111800191 [Cucurbita pepo subsp. pepo]	[more]
KAG6596278.1	9.10e-149	94.81	Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022962440.1	7.21e-148	95.22	uncharacterized protein LOC111462854 [Cucurbita moschata]	[more]
KAG7027829.1	7.75e-148	94.40	Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022971305.1	3.30e-146	93.01	uncharacterized protein LOC111470063 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG08g12740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HF26	3.49e-148	95.22	uncharacterized protein LOC111462854 OS=Cucurbita moschata OX=3662 GN=LOC1114628...	[more]
A0A6J1I5D3	1.60e-146	93.01	uncharacterized protein LOC111470063 OS=Cucurbita maxima OX=3661 GN=LOC111470063...	[more]
A0A5D3CLS0	1.96e-92	67.21	Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BLF2	1.96e-92	67.21	uncharacterized protein LOC103491103 OS=Cucumis melo OX=3656 GN=LOC103491103 PE=...	[more]
A0A0A0L0X7	1.75e-88	64.78	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G001720 P...	[more]

BLAST of Cp4.1LG08g12740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35700.1	4.8e-14	38.82	zinc finger (C2H2 type) family protein	[more]
AT4G35610.1	2.9e-11	36.91	zinc finger (C2H2 type) family protein	[more]
AT4G35280.1	8.8e-08	34.78	C2H2-like zinc finger protein	[more]
AT2G26940.1	2.6e-07	42.22	C2H2-type zinc finger family protein	[more]
AT5G56200.1	3.7e-06	34.12	C2H2 type zinc finger transcription factor family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 126..149 e-value: 8.1E-8 score: 32.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	PANTHER	PTHR47591:SF4	TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE	coord: 11..229
None	No IPR available	PANTHER	PTHR47591	ZINC FINGER PROTEIN ZAT2-RELATED	coord: 11..229
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 127..147
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 125..147 score: 8.64193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g12740.1	Cp4.1LG08g12740.1	mRNA