Cp4.1LG08g12660 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g12660
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	elongation factor P
Location	Cp4.1LG08: 9111939 .. 9116525 (+)
RNA-Seq Expression	Cp4.1LG08g12660
Synteny	Cp4.1LG08g12660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTAAAGAATGGCGGTAAAGGTGAAATCCTGCCCTCCCAGGCCTTATCCCCGAACGACGCCTTACTCCTTTCCTGTCATTCTGCGCAAGGCTTGAGGGGGAAAGCTCAGAGAAACCACTTACAGTTGCCGAGACGCTCCCAGACATGGCTGACGCTCTCCTCTGTAATGCCTCGTTCTCTTCTGCTTTTCTCGCCCGCCGCTCATCGTCAATGGCCTCGCTTTCGCTCTCTTCGAAGCCGTCTGTTCTCCGAACCCGGCGGTTTTCTTCCTCGGCTAATTCGCGTACCAGATTTTCGAGTAAACCCTTCGATTATGGCATTGCTCCGTGTCATTTCTGAATGTTCGGTTGAATTTCATTCCTCGGGTTTAGCATTGTAATTTTTGTTGCACTTTCAGGGATTTATGCGTTAACTAGCAACGACATCAAGGTTGGCACCAATATTGAAGTGGATGGAGCTCCTTGGCGGGTTTTAGGTTGTTTCTCTACCCCTTGTCTAATTTCCCCTTCCCCAATCATTATTTATTGCTGCTCGATTTTTCAAACCGGAGTGAGTGTTCTTGAATTGTTGTTTTTTGGATAGAGTTCCTTCATGTTAAACCCGGCAAAGGAGCAGCGTTTGTAAGGACCAAAATTCGCAATTATGTATCAGGAAATACGGTTGAGAGAACTTTTCGAGCAGGAAGCTCGGTGAGTAGCAGAATTATTATCTAGTCATGCATGCGAGAATTTGCTGTTCATATATATTTCAAACCTATAATCACTGCTGAATGGTTCAATATCATCCACTTTGTTTCCCATTGATTTTGGTAGATATCGTCCCTCTTGTTTAAATTGAACTCAGATATCTGTTTCAGCTTTTATTTCATTGATATCCCCACCGTATTAAACGGGCTAGAAAGTTATGTGGGAGCTTTTAGCTACTCATATAATGGGAGATTCGAGGGAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAACCGTGAGGCCAACGACGATATGTAACGGGTCATAACGGACAATTTCTGCTAGCGGTGGGTTTGGGCTGTTACAAATGGTATCAGGTCAGACACCGGGTGGTGTGCCAGCGAGGACACTGGTCCCCAAGGGGGTGGATTGTGAGATCTCACATCGGTTGGAGAGGGGAATGAAACATTCCTTATAAGGGTATGGAAACCTCTCCCTAGTAGACGTGTTTTAAAATCGTGAGGCCAACGACGATATGTAACGGGTCATAACGGACAATTTCTGCTAGCGGTGGGTTTGGGCTGTTACAAATGGTATCAGGTCAGACACCGGGTGGTGTGCCAGCGAGGACACTGGTCCCCAAGGGGGTGGATTGTGAGATCTCACATCGGTTGGAGAGGGGAATGAAACATTCCTTATAAGGGTATGGAAACCTCTCCCTAGTAGACGTGTTTTAAAATCGTGAGGCTGACGACAATACGTACGGGCAAAAGCGGACAATATCTGCTGGCGGTGGATTTGGGCTATTACAAATGGTATCAGGGTCAGACACCGAACGGTATGCCAGCTAGGACGGTGGCCCCCAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAATGAAACATTCCTTATAAGGGTGTAGAAACCTCTCCCTAGTAGTCGCATTTTAAAATCGTGAGGCAGACGACGATATATAACGAGCCAAAGCGGACAATATCTGCTAGCGGTGGGCTTAGGCGGCTTGCCAGAAGAAGTGAAAAAGGAAATTTTCCTAGGGCGTAAAATGTGCATTACCAGCAGGTTATATAATGTAATTTGCAACTATTACTTCGGATCTCATGTAATAATCAAAACAGATTTATCTGCTAGATTTCAAGAACTATGTAGAAAATGGGATGCTATACCCAACCACACTTTATGCCCTCAAATGCTTTCTCAAAACCTTGATTCTGTAAAAGATTTGCTACAAATATGATGTTCTTTCTCTCATATTTTCTTCCTCGTCCATAATTATTTGTCTATAATTGTCTTTCCAGCTTGATGAGGCCAATGTATACAAGGAAGTCAAGCAGTTCACATACAAAGATGGTTCTCAGTTTGTTTTCATGGATCTGGTATATAAATACACACATGCACACACGCACACGCACACGCGTATATGTAGTTATGATTTGGTCGTTATTGTCTCCTTTCTCATAATTCACAAAGAATTTCTCTTTAGACAACTTGATATATGGGGTAGCTCTTCTCATAGTCACGTTCTATACGAAGCTAGTTAGCGAATAAATTTTAGTTTGCTAGTCCTCAACTGCATCAAATGAGTTGAAATGGCTCACTTTTCAGAGTACGTATGAAGAAATACGCCTAAATGCAGCCGACGTTGGTGATAGGACAAAGTGGCTGAAAGAAGGAATGGACTGCATCGTATTGTTTTGGAATGGGAAGGTAATCCGATCACTTAGACAGCTTTTTACAGGCATTTTTTTACTATGTTTCCCGAATAGAGTTCATAACGCGGTTCTTAAATGGTTCGCTCTCGAAAAAATACGATAAGATTTAGCAGCTTTCCTATTTCTTGATGAACGAGTCACATGTCATGAACATTGCTTCCAAGTTTCTACAAAGTGTCAGTGTGGCATCAGTTATAAGAACTGAAATATGATGATAGTAATTCTTGAGTCGTCTCATTTCTCTGTTCTCCCATCTTTTAGGTTATTGATTTTGAGGTTCCCAACACAATTCAATTGACTGTGGTTGACGTTGATCCTGGGCTGAAAGGGGACACTGCACAAGGTACCACACTTTTCCTTGTCTTTTAGGACCAAAAATCTTCTTTTAATGCTTTGTTAATGATTTGCAGCGAGATAAGGTTCTTTGTATTTAAGTGGGCTAAAATTTCCATAACATATTTGAGCATGATTAGATTAGTGTACAAAACCAATATCTTGTTGATGAAGATCCAAGTACCCAAAAATAATAAGGAATTAACCCTTTTAGAACGGATTACCTTGATGATCAAGATCAAGAGTAAAAAAAACTCGTTTCTAAGCTCGTAATTCGAATCACTTCACTAGATAGTTTAATCAAAACGACTTGAATGACTAATCTAAACCCAAGAAATGTAAAGGAACAAGCTGATGGCATGCATAATATGAAACTTTCATTATAATTTCTAAAATTTTCATACTAAAGCAACAACATGAATGACTATTTATAGCTTTGAAAATAAACATTACAGCAACCTATGGTTAATTGAAGGATTGTAACTTTTATGGCCATCAATACCATAATGATCACTATCTAAATGTAACTTATAATCTTAAAGATAATTCTCTGTAACTTAAAAAAATACAATAAAACCTCCATAAATCCAAGCAACACCCATGGATCTTGTCATCAACCATAAAATGTTTGTGGCATCATCAAGACACTTTATTTCGTATCACTTAGATTTACGAAATTTATGTTGTGTACTGTTTAGAAAAGCAACTGTAACCGTCTCAATCTGTATAGTTTGTTTTTAGCTTGTGAGTTTATAACTTGTTTAAGGTTCATTTCATAACTTGTATTTATGTAATTTGAGTTCATGTAGTCCCTGAGATTATTAAGTCCTTAATTTAGAATAAACAAACCTACATTCTAATGTGTATGATTTCCTAATCTTTAAGTTGCAGAGATCTAATTCATAGACTAAACATTCCTTAAAAGTGGAACATTTATGTTAATTTCCATGTGAGGCCCCACATTGAGGATGCTAGTGATGCTAGCGGGTGGTGTGCCAGGGAGGATGTTGGGCCTTCAAGGGGGCTGGATTGTAAAATCCCATGTCGGTTGGAGAGGGAACCGGGAACGAAACATTTCTTATAAGGGTGTGGAAAAAACCTCTCCCTAGTAGACATATTTTAAAACCGTGAGGTTGACGGTGAACGTAAACGGGCTAAAACAGACAATATCTGCTAGTGGTGGGTTTGGGCTATTACATTCCATTACCCACGTGATATATTGGAATCAACAATTTCCTCCCTTCAAGCGACAACGTCGTTAACCTCGATTCCCTCGATCCTCAACCATAGGGTTTGTGTCTGCATCATGGTCGACATAGATTTCCTGGTCTTAGTCATACGGATTGGTTCTTTTTCATCCAAGCCACAATATTTTTTCTTAATAATTACATTGGCAGCCTTCTAATTGAAGATGAAATTTGATTGGCAGGTGGATCAAAGCCCGCAACTCTTGAAACTGGAGCCGTTGTTAATGTCCCTCTGTTTGTAAACGTTGGCGATAGCATAGTGGTAGATACCAGGACTGGCCAATACACTAGCCGGGCGTGAAATTTGACACACACTTGACACTCATCGGCGGCAGGTTTTGTCAGTACTCTTCTAAAGAGCAATTATTTTGGTCTCTGTTGTAGATTCCTCTCCCTCCTACTCTTTTCACTATTAAGATTTGGATTCCTTAGTTAGTGCTGAAGTATCTCTAAGTATATACCAAATTATCGACCAGCTAAATTCATGTTTGTTACACAATTTTCAATACTTTAAGAAATAACTCGTTATCGGACAGCATCATAGATTTGTCTGCA

mRNA sequence

CAATTAAAGAATGGCGGTAAAGGTGAAATCCTGCCCTCCCAGGCCTTATCCCCGAACGACGCCTTACTCCTTTCCTGTCATTCTGCGCAAGGCTTGAGGGGGAAAGCTCAGAGAAACCACTTACAGTTGCCGAGACGCTCCCAGACATGGCTGACGCTCTCCTCTGTAATGCCTCGTTCTCTTCTGCTTTTCTCGCCCGCCGCTCATCGTCAATGGCCTCGCTTTCGCTCTCTTCGAAGCCGTCTGTTCTCCGAACCCGGCGGTTTTCTTCCTCGGCTAATTCGCGTACCAGATTTTCGAGGATTTATGCGTTAACTAGCAACGACATCAAGGTTGGCACCAATATTGAAGTGGATGGAGCTCCTTGGCGGGTTTTAGAGTTCCTTCATGTTAAACCCGGCAAAGGAGCAGCGTTTGTAAGGACCAAAATTCGCAATTATGTATCAGGAAATACGGTTGAGAGAACTTTTCGAGCAGGAAGCTCGAGTACGTATGAAGAAATACGCCTAAATGCAGCCGACGTTGGTGATAGGACAAAGTGGCTGAAAGAAGGAATGGACTGCATCGTATTGTTTTGGAATGGGAAGGTTATTGATTTTGAGGTTCCCAACACAATTCAATTGACTGTGGTTGACGTTGATCCTGGGCTGAAAGGGGACACTGCACAAGGTGGATCAAAGCCCGCAACTCTTGAAACTGGAGCCGTTGTTAATGTCCCTCTGTTTGTAAACGTTGGCGATAGCATAGTGGTAGATACCAGGACTGGCCAATACACTAGCCGGGCGTGAAATTTGACACACACTTGACACTCATCGGCGGCAGGTTTTGTCAGTACTCTTCTAAAGAGCAATTATTTTGGTCTCTGTTGTAGATTCCTCTCCCTCCTACTCTTTTCACTATTAAGATTTGGATTCCTTAGTTAGTGCTGAAGTATCTCTAAGTATATACCAAATTATCGACCAGCTAAATTCATGTTTGTTACACAATTTTCAATACTTTAAGAAATAACTCGTTATCGGACAGCATCATAGATTTGTCTGCA

Coding sequence (CDS)

ATGGCTGACGCTCTCCTCTGTAATGCCTCGTTCTCTTCTGCTTTTCTCGCCCGCCGCTCATCGTCAATGGCCTCGCTTTCGCTCTCTTCGAAGCCGTCTGTTCTCCGAACCCGGCGGTTTTCTTCCTCGGCTAATTCGCGTACCAGATTTTCGAGGATTTATGCGTTAACTAGCAACGACATCAAGGTTGGCACCAATATTGAAGTGGATGGAGCTCCTTGGCGGGTTTTAGAGTTCCTTCATGTTAAACCCGGCAAAGGAGCAGCGTTTGTAAGGACCAAAATTCGCAATTATGTATCAGGAAATACGGTTGAGAGAACTTTTCGAGCAGGAAGCTCGAGTACGTATGAAGAAATACGCCTAAATGCAGCCGACGTTGGTGATAGGACAAAGTGGCTGAAAGAAGGAATGGACTGCATCGTATTGTTTTGGAATGGGAAGGTTATTGATTTTGAGGTTCCCAACACAATTCAATTGACTGTGGTTGACGTTGATCCTGGGCTGAAAGGGGACACTGCACAAGGTGGATCAAAGCCCGCAACTCTTGAAACTGGAGCCGTTGTTAATGTCCCTCTGTTTGTAAACGTTGGCGATAGCATAGTGGTAGATACCAGGACTGGCCAATACACTAGCCGGGCGTGA

Protein sequence

MADALLCNASFSSAFLARRSSSMASLSLSSKPSVLRTRRFSSSANSRTRFSRIYALTSNDIKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSSTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPNTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA

Homology

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BLAST of Cp4.1LG08g12660 vs. ExPASy Swiss-Prot
Match: Q54760 (Elongation factor P OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=efp PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.2e-50
Identity = 97/183 (53.01%), Postives = 126/183 (68.85%), Query Frame = 0


Query: 56  LTSNDIKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS-- 115
           ++SND + GT IE+DGA WRV+EFLHVKPGKG+AFVRTK++N  +GN VE+TFRAG +  
Sbjct: 2   ISSNDFRTGTTIEIDGAVWRVVEFLHVKPGKGSAFVRTKLKNAKTGNVVEKTFRAGETVP 61

Query: 116 ------------------------STYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVI 175
                                    TYEE RL AA +GDR K+LKEGM+  V+ WNG+VI
Sbjct: 62  QAVLEKSTLQYTYKDGDDFVFMDMETYEEGRLTAATIGDRVKYLKEGMEANVITWNGQVI 121

Query: 176 DFEVPNTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQY 213
           + E+PN++ L V++ DPG+KGDTA GG+KPA +ETGA V VPLF++VG+ I +DTR   Y
Sbjct: 122 EVELPNSVVLEVIETDPGVKGDTATGGTKPAKVETGAQVMVPLFISVGERIKIDTRNDSY 181

[Close]

BLAST of Cp4.1LG08g12660 vs. ExPASy Swiss-Prot
Match: Q5N1T5 (Elongation factor P OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=efp PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.2e-50
Identity = 97/183 (53.01%), Postives = 126/183 (68.85%), Query Frame = 0


Query: 56  LTSNDIKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS-- 115
           ++SND + GT IE+DGA WRV+EFLHVKPGKG+AFVRTK++N  +GN VE+TFRAG +  
Sbjct: 2   ISSNDFRTGTTIEIDGAVWRVVEFLHVKPGKGSAFVRTKLKNAKTGNVVEKTFRAGETVP 61

Query: 116 ------------------------STYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVI 175
                                    TYEE RL AA +GDR K+LKEGM+  V+ WNG+VI
Sbjct: 62  QAVLEKSTLQYTYKDGDDFVFMDMETYEEGRLTAATIGDRVKYLKEGMEANVITWNGQVI 121

Query: 176 DFEVPNTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQY 213
           + E+PN++ L V++ DPG+KGDTA GG+KPA +ETGA V VPLF++VG+ I +DTR   Y
Sbjct: 122 EVELPNSVVLEVIETDPGVKGDTATGGTKPAKVETGAQVMVPLFISVGERIKIDTRNDSY 181

[Close]

BLAST of Cp4.1LG08g12660 vs. ExPASy Swiss-Prot
Match: Q2JP65 (Elongation factor P OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=efp PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-48
Identity = 94/183 (51.37%), Postives = 123/183 (67.21%), Query Frame = 0


Query: 56  LTSNDIKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS-- 115
           ++SND++ G ++E+DGAP++V+EFLHVKPGKGAAFVRTK++N  +GN VE+TFRAG +  
Sbjct: 2   ISSNDLRPGVSVEIDGAPYKVIEFLHVKPGKGAAFVRTKLKNMQTGNVVEKTFRAGETLP 61

Query: 116 ------------------------STYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVI 175
                                    TYE+  + AA +G   K+LKE M   +L WNG+VI
Sbjct: 62  AATIEKVEMQYLYAEGNNLVFMDMETYEQAPITAAQIGSAVKYLKENMQVSILRWNGQVI 121

Query: 176 DFEVPNTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQY 213
           D E+PNT+ L VV+ DPG+KGDTA GG+KPA LETGA + VPLF+ VG+ I VDTRT  Y
Sbjct: 122 DVELPNTVVLEVVETDPGVKGDTATGGTKPAKLETGAEIQVPLFIKVGERIRVDTRTDTY 181

[Close]

BLAST of Cp4.1LG08g12660 vs. ExPASy Swiss-Prot
Match: Q2JUZ8 (Elongation factor P OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=efp PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 6.0e-48
Identity = 92/183 (50.27%), Postives = 123/183 (67.21%), Query Frame = 0


Query: 56  LTSNDIKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAG---- 115
           ++SND++ G ++E+DGAP++V+EFLHVKPGKGAAFVRTK++N  +GN VE+TFRAG    
Sbjct: 2   ISSNDLRPGVSVEIDGAPYKVIEFLHVKPGKGAAFVRTKLKNMQTGNVVEKTFRAGEMLP 61

Query: 116 ----------------------SSSTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVI 175
                                    TYE+  L+AA +G   K+LKE M+  +L W G+VI
Sbjct: 62  AATIEKVNMQYLYSEGDNFVFMDMETYEQAPLSAAQIGSAVKYLKENMEVAILRWKGQVI 121

Query: 176 DFEVPNTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQY 213
           D E+PNT+ L VV+ DPG++GDTA GG+KPA LETGA + VPLF+ VG+ + VDTRT  Y
Sbjct: 122 DVELPNTVVLEVVETDPGVRGDTATGGTKPAKLETGAEIQVPLFIKVGERVRVDTRTDTY 181

[Close]

BLAST of Cp4.1LG08g12660 vs. ExPASy Swiss-Prot
Match: Q7V9B9 (Elongation factor P OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=efp PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.7e-47
Identity = 93/183 (50.82%), Postives = 121/183 (66.12%), Query Frame = 0


Query: 56  LTSNDIKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAG---- 115
           ++SND + GT+IE+DG+ WRV+EFLHVKPGKG+AFVRTK++   SGN VE+TFRAG    
Sbjct: 2   ISSNDFRTGTSIELDGSVWRVVEFLHVKPGKGSAFVRTKLKAVQSGNVVEKTFRAGEMLP 61

Query: 116 ----------------------SSSTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVI 175
                                   S+YEE RL A  +GD  K+LKEGM+  V+ WNG  +
Sbjct: 62  QALLEKSTLQHTYMESGDYVFMDMSSYEETRLTAQQIGDSRKYLKEGMEVNVVSWNGNPL 121

Query: 176 DFEVPNTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQY 213
           + E+PN++ L + + DPG+KGDTA GG+KPA LETGA V VPLF++VG+ I VDTR   Y
Sbjct: 122 EVELPNSVVLEITETDPGVKGDTATGGTKPAILETGAQVMVPLFLSVGEKIKVDTRNDSY 181

[Close]

BLAST of Cp4.1LG08g12660 vs. NCBI nr
Match: XP_023538922.1 (uncharacterized protein LOC111799706 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395 bits (1015), Expect = 8.49e-138
Identity = 213/239 (89.12%), Postives = 213/239 (89.12%), Query Frame = 0


Query: 1   MADALLCNASFSSAFLARRSSSMASLSLSSKPSVLRTRRFSSSANSRTRFSRIYALTSND 60
           MADALLCNASFSSAFLARRSSSMASLSLSSKPSVLRTRRFSSSANSRTRFSRIYALTSND
Sbjct: 1   MADALLCNASFSSAFLARRSSSMASLSLSSKPSVLRTRRFSSSANSRTRFSRIYALTSND 60

Query: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS------- 120
           IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS       
Sbjct: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 120

Query: 121 -------------------STYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180
                              STYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP
Sbjct: 121 KEVKQFTYKDGSQFVFMDLSTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180

Query: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 213
           NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA
Sbjct: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239

[Close]

BLAST of Cp4.1LG08g12660 vs. NCBI nr
Match: XP_022938045.1 (uncharacterized protein LOC111444251 [Cucurbita moschata])

HSP 1 Score: 389 bits (1000), Expect = 1.64e-135
Identity = 210/239 (87.87%), Postives = 211/239 (88.28%), Query Frame = 0


Query: 1   MADALLCNASFSSAFLARRSSSMASLSLSSKPSVLRTRRFSSSANSRTRFSRIYALTSND 60
           MADALLCNASFSSAFLARRSSS ASLSLSSKPSVLRTRRFSSSANSRTRF RIYALTSND
Sbjct: 1   MADALLCNASFSSAFLARRSSSTASLSLSSKPSVLRTRRFSSSANSRTRFLRIYALTSND 60

Query: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS------- 120
           IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS       
Sbjct: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 120

Query: 121 -------------------STYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180
                              +TYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP
Sbjct: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180

Query: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 213
           NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA
Sbjct: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239

[Close]

BLAST of Cp4.1LG08g12660 vs. NCBI nr
Match: KAG6596305.1 (hypothetical protein SDJN03_09485, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 387 bits (994), Expect = 1.35e-134
Identity = 209/239 (87.45%), Postives = 210/239 (87.87%), Query Frame = 0


Query: 1   MADALLCNASFSSAFLARRSSSMASLSLSSKPSVLRTRRFSSSANSRTRFSRIYALTSND 60
           MADALLCNAS SSAFLARRSSSMASLSLSSKPSVLRTRRFS SANSRTRF RIYALTSND
Sbjct: 1   MADALLCNASLSSAFLARRSSSMASLSLSSKPSVLRTRRFSFSANSRTRFLRIYALTSND 60

Query: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS------- 120
           IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS       
Sbjct: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 120

Query: 121 -------------------STYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180
                              +TYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP
Sbjct: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180

Query: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 213
           NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA
Sbjct: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239

[Close]

BLAST of Cp4.1LG08g12660 vs. NCBI nr
Match: KAG7027859.1 (efp, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 386 bits (992), Expect = 8.74e-134
Identity = 209/239 (87.45%), Postives = 210/239 (87.87%), Query Frame = 0


Query: 1   MADALLCNASFSSAFLARRSSSMASLSLSSKPSVLRTRRFSSSANSRTRFSRIYALTSND 60
           MADALLCNAS SSAFLARRSSSMASLSLSSK SVLRTRRFSSSANSRTRF RIYALTSND
Sbjct: 34  MADALLCNASLSSAFLARRSSSMASLSLSSKSSVLRTRRFSSSANSRTRFLRIYALTSND 93

Query: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS------- 120
           IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS       
Sbjct: 94  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 153

Query: 121 -------------------STYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180
                              +TYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP
Sbjct: 154 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 213

Query: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 213
           NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA
Sbjct: 214 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 272

[Close]

BLAST of Cp4.1LG08g12660 vs. NCBI nr
Match: XP_022971212.1 (uncharacterized protein LOC111470003 [Cucurbita maxima])

HSP 1 Score: 382 bits (981), Expect = 1.24e-132
Identity = 208/239 (87.03%), Postives = 209/239 (87.45%), Query Frame = 0


Query: 1   MADALLCNASFSSAFLARRSSSMASLSLSSKPSVLRTRRFSSSANSRTRFSRIYALTSND 60
           MADALLCNAS SSAFLARRSSSM SLSLSSKPSVLRTRRFSS ANSRTRFSRIYALTSND
Sbjct: 1   MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRFSS-ANSRTRFSRIYALTSND 60

Query: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS------- 120
           IKVGTNIEVDG PWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS       
Sbjct: 61  IKVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 120

Query: 121 -------------------STYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180
                              +TYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP
Sbjct: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180

Query: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 213
           NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA
Sbjct: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 238

[Close]

BLAST of Cp4.1LG08g12660 vs. ExPASy TrEMBL
Match: A0A6J1FIJ6 (uncharacterized protein LOC111444251 OS=Cucurbita moschata OX=3662 GN=LOC111444251 PE=3 SV=1)

HSP 1 Score: 389 bits (1000), Expect = 7.94e-136
Identity = 210/239 (87.87%), Postives = 211/239 (88.28%), Query Frame = 0


Query: 1   MADALLCNASFSSAFLARRSSSMASLSLSSKPSVLRTRRFSSSANSRTRFSRIYALTSND 60
           MADALLCNASFSSAFLARRSSS ASLSLSSKPSVLRTRRFSSSANSRTRF RIYALTSND
Sbjct: 1   MADALLCNASFSSAFLARRSSSTASLSLSSKPSVLRTRRFSSSANSRTRFLRIYALTSND 60

Query: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS------- 120
           IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS       
Sbjct: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 120

Query: 121 -------------------STYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180
                              +TYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP
Sbjct: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180

Query: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 213
           NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA
Sbjct: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239

[Close]

BLAST of Cp4.1LG08g12660 vs. ExPASy TrEMBL
Match: A0A6J1I1D0 (uncharacterized protein LOC111470003 OS=Cucurbita maxima OX=3661 GN=LOC111470003 PE=3 SV=1)

HSP 1 Score: 382 bits (981), Expect = 6.02e-133
Identity = 208/239 (87.03%), Postives = 209/239 (87.45%), Query Frame = 0


Query: 1   MADALLCNASFSSAFLARRSSSMASLSLSSKPSVLRTRRFSSSANSRTRFSRIYALTSND 60
           MADALLCNAS SSAFLARRSSSM SLSLSSKPSVLRTRRFSS ANSRTRFSRIYALTSND
Sbjct: 1   MADALLCNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRFSS-ANSRTRFSRIYALTSND 60

Query: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS------- 120
           IKVGTNIEVDG PWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS       
Sbjct: 61  IKVGTNIEVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVY 120

Query: 121 -------------------STYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180
                              +TYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP
Sbjct: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180

Query: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 213
           NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA
Sbjct: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 238

[Close]

BLAST of Cp4.1LG08g12660 vs. ExPASy TrEMBL
Match: A0A1S3B5F0 (elongation factor P OS=Cucumis melo OX=3656 GN=LOC103486227 PE=3 SV=1)

HSP 1 Score: 341 bits (875), Expect = 8.42e-117
Identity = 186/239 (77.82%), Postives = 195/239 (81.59%), Query Frame = 0


Query: 1   MADALLCNASFSSAFLARRSSSMASLSLSSKPSVLRTRRFSSSANSRTRFSRIYALTSND 60
           MA  LLCNAS  SAFLAR SSS  SLSL  K  V RT R SSS +SRT F RIYALTSND
Sbjct: 1   MAGTLLCNASLVSAFLARTSSSKTSLSLPLKSPVFRTSR-SSSPSSRTGFFRIYALTSND 60

Query: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS------- 120
           IKVGTN+EVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYV+GNTVE+TFRAGSS       
Sbjct: 61  IKVGTNLEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLEEANVY 120

Query: 121 -------------------STYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180
                              +TYEEIRLNAADVGDRTKWLKEGMDC+VLFWNGKVIDFEVP
Sbjct: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCVVLFWNGKVIDFEVP 180

Query: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 213
            TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLF+NVGDSI++DTRTGQYTSRA
Sbjct: 181 ITIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIMIDTRTGQYTSRA 238

[Close]

BLAST of Cp4.1LG08g12660 vs. ExPASy TrEMBL
Match: A0A0A0LD89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G728090 PE=3 SV=1)

HSP 1 Score: 339 bits (869), Expect = 6.22e-116
Identity = 186/239 (77.82%), Postives = 194/239 (81.17%), Query Frame = 0


Query: 1   MADALLCNASFSSAFLARRSSSMASLSLSSKPSVLRTRRFSSSANSRTRFSRIYALTSND 60
           MA  LLCNAS +SAFLAR SSS  SLSL  KP  LR    S S +SRT F RIYALTSND
Sbjct: 1   MAGTLLCNASSASAFLARTSSSKTSLSLPLKPLALR----SFSPSSRTGFFRIYALTSND 60

Query: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS------- 120
           IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYV+GNTVE+TFRAGSS       
Sbjct: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLEEANVY 120

Query: 121 -------------------STYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180
                              +TYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP
Sbjct: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180

Query: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 213
            TIQLTVVDVDPGLKGDTAQGGSKPATLETGAVV+VPLF+NVGDSIV+DTRTGQYTSRA
Sbjct: 181 ITIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVSVPLFINVGDSIVIDTRTGQYTSRA 235

[Close]

BLAST of Cp4.1LG08g12660 vs. ExPASy TrEMBL
Match: A0A6J1DSR9 (uncharacterized protein LOC111024058 OS=Momordica charantia OX=3673 GN=LOC111024058 PE=3 SV=1)

HSP 1 Score: 328 bits (840), Expect = 1.79e-111
Identity = 178/239 (74.48%), Postives = 195/239 (81.59%), Query Frame = 0


Query: 1   MADALLCNASFSSAFLARRSSSMASLSLSSKPSVLRTRRFSSSANSRTRFSRIYALTSND 60
           MAD ++C+AS +SAFL RRSSS  SLSL  KPS+L  R+ S  A+SR  FSRIYAL+SND
Sbjct: 1   MADIVVCSASSASAFLGRRSSSTTSLSLPFKPSLLPIRQVSL-ASSRPGFSRIYALSSND 60

Query: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS------- 120
           IKVGTN+EVDGAPWRVL  L VKPGKGAAFVRTK+RNYV+GNTVE+TFRAGSS       
Sbjct: 61  IKVGTNVEVDGAPWRVLGCLXVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVY 120

Query: 121 -------------------STYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180
                              +TYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP
Sbjct: 121 KEVKQFTYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180

Query: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 213
            T+QLTVV+VDPGLKGDTAQGGSKPATLETGAVVNVPLF+NVGDSIV+DTRTGQYTSRA
Sbjct: 181 ITVQLTVVEVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA 238

[Close]

BLAST of Cp4.1LG08g12660 vs. TAIR 10
Match: AT3G08740.1 (elongation factor P (EF-P) family protein )

HSP 1 Score: 251.5 bits (641), Expect = 5.9e-67
Identity = 135/232 (58.19%), Postives = 168/232 (72.41%), Query Frame = 0


Query: 9   ASFSSAFLARRSSSMASLSLSSKPSVLRTRRFSSSANSRTRFSRIY-ALTSNDIKVGTNI 68
           +S  S  +   ++S +S++  + P+V    R S   N   RF RI+ ++++NDIK GTNI
Sbjct: 12  SSTPSLCIPYSTASFSSMNRLALPAV----RISPRTN---RFPRIHCSMSANDIKAGTNI 71

Query: 69  EVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSS-------------- 128
           EVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYV+G+TVERTFRAG S              
Sbjct: 72  EVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVNGSTVERTFRAGISVEEANIYKETKQFT 131

Query: 129 ------------STYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPNTIQLTV 188
                       +TYEE RLN +D+G++TKWLKEGMDCI+L+W  KVIDF++P T++L V
Sbjct: 132 YKDGSQFVFMDLTTYEETRLNESDMGEKTKWLKEGMDCILLYWKDKVIDFDLPITVKLKV 191

Query: 189 VDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 214
           VDVDPGL+GDT QGGSKPAT+ETGA+V VPLF+NVG+ I VDTRTG Y +RA
Sbjct: 192 VDVDPGLRGDTVQGGSKPATMETGAIVAVPLFINVGEEIFVDTRTGAYMNRA 236

[Close]

BLAST of Cp4.1LG08g12660 vs. TAIR 10
Match: AT4G26310.1 (elongation factor P (EF-P) family protein )

HSP 1 Score: 72.8 bits (177), Expect = 3.8e-13
Identity = 45/178 (25.28%), Postives = 83/178 (46.63%), Query Frame = 0


Query: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGN----------TVERTFRA 120
           ++ G  IE  G  +RV+E  H + G+G A ++ ++R+  +GN          +VE+ F  
Sbjct: 78  LRAGNVIERTGRTFRVVEAEHKQQGRGGASIQVELRDVDTGNKLNLRFGSEESVEKVFVE 137

Query: 121 GSS----------------STYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180
             S                +T+E++ +     G    +LKE M   +  ++G+ +   +P
Sbjct: 138 EKSFTCLYAEGDTAYLIEPNTFEQVEVPLDIFGKAAVYLKEEMKVQLQLYDGRALSASIP 197

Query: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSR 213
             I  TVV+    +KG T+    K A L+ G+ + VP ++  G+ IV++T    +  R
Sbjct: 198 KHITCTVVETQLPMKGLTSAPRYKRALLDNGSTIQVPSYLEAGEKIVINTEDDSFVKR 255

[Close]

BLAST of Cp4.1LG08g12660 vs. TAIR 10
Match: AT4G26310.2 (elongation factor P (EF-P) family protein )

HSP 1 Score: 55.8 bits (133), Expect = 4.8e-08
Identity = 38/154 (24.68%), Postives = 70/154 (45.45%), Query Frame = 0


Query: 61  IKVGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGN----------TVERTFRA 120
           ++ G  IE  G  +RV+E  H + G+G A ++ ++R+  +GN          +VE+ F  
Sbjct: 78  LRAGNVIERTGRTFRVVEAEHKQQGRGGASIQVELRDVDTGNKLNLRFGSEESVEKVFVE 137

Query: 121 GSS----------------STYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVP 180
             S                +T+E++ +     G    +LKE M   +  ++G+ +   +P
Sbjct: 138 EKSFTCLYAEGDTAYLIEPNTFEQVEVPLDIFGKAAVYLKEEMKVQLQLYDGRALSASIP 197

Query: 181 NTIQLTVVDVDPGLKGDTAQGGSKPATLETGAVV 189
             I  TVV+    +KG T+    K A L+ G+ +
Sbjct: 198 KHITCTVVETQLPMKGLTSAPRYKRALLDNGSTI 231

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g12660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54760	2.2e-50	53.01	Elongation factor P OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=...	[more]
Q5N1T5	2.2e-50	53.01	Elongation factor P OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 14...	[more]
Q2JP65	1.2e-48	51.37	Elongation factor P OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=e...	[more]
Q2JUZ8	6.0e-48	50.27	Elongation factor P OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=efp PE=3...	[more]
Q7V9B9	6.7e-47	50.82	Elongation factor P OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=efp...	[more]

BLAST of Cp4.1LG08g12660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538922.1	8.49e-138	89.12	uncharacterized protein LOC111799706 [Cucurbita pepo subsp. pepo]	[more]
XP_022938045.1	1.64e-135	87.87	uncharacterized protein LOC111444251 [Cucurbita moschata]	[more]
KAG6596305.1	1.35e-134	87.45	hypothetical protein SDJN03_09485, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7027859.1	8.74e-134	87.45	efp, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022971212.1	1.24e-132	87.03	uncharacterized protein LOC111470003 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG08g12660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FIJ6	7.94e-136	87.87	uncharacterized protein LOC111444251 OS=Cucurbita moschata OX=3662 GN=LOC1114442...	[more]
A0A6J1I1D0	6.02e-133	87.03	uncharacterized protein LOC111470003 OS=Cucurbita maxima OX=3661 GN=LOC111470003...	[more]
A0A1S3B5F0	8.42e-117	77.82	elongation factor P OS=Cucumis melo OX=3656 GN=LOC103486227 PE=3 SV=1	[more]
A0A0A0LD89	6.22e-116	77.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G728090 PE=3 SV=1	[more]
A0A6J1DSR9	1.79e-111	74.48	uncharacterized protein LOC111024058 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of Cp4.1LG08g12660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08740.1	5.9e-67	58.19	elongation factor P (EF-P) family protein	[more]
AT4G26310.1	3.8e-13	25.28	elongation factor P (EF-P) family protein	[more]
AT4G26310.2	4.8e-08	24.68	elongation factor P (EF-P) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015365	Elongation factor P, C-terminal	SMART	SM00841	Elong_fact_P_C_2	coord: 157..212 e-value: 2.0E-31 score: 120.4
IPR015365	Elongation factor P, C-terminal	PFAM	PF09285	Elong-fact-P_C	coord: 157..212 e-value: 1.4E-27 score: 95.2
IPR015365	Elongation factor P, C-terminal	CDD	cd05794	S1_EF-P_repeat_2	coord: 157..212 e-value: 2.38019E-27 score: 96.8242
IPR001059	Translation elongation factor P/YeiP, central	SMART	SM01185	EFP_2	coord: 101..149 e-value: 3.7E-5 score: 31.7
IPR001059	Translation elongation factor P/YeiP, central	PFAM	PF01132	EFP	coord: 114..149 e-value: 1.2E-11 score: 44.4
IPR001059	Translation elongation factor P/YeiP, central	CDD	cd04470	S1_EF-P_repeat_1	coord: 115..154 e-value: 2.31199E-15 score: 65.9423
IPR013185	Translation elongation factor, KOW-like	PFAM	PF08207	EFP_N	coord: 58..111 e-value: 3.0E-24 score: 84.8
None	No IPR available	GENE3D	2.40.50.140		coord: 156..213 e-value: 2.1E-26 score: 93.3
None	No IPR available	GENE3D	2.40.50.140		coord: 114..155 e-value: 9.4E-13 score: 50.0
None	No IPR available	PANTHER	PTHR30053:SF12	ELONGATION FACTOR P (EF-P) FAMILY PROTEIN	coord: 14..113 coord: 114..213
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 47..113 e-value: 1.4E-25 score: 90.5
IPR020599	Translation elongation factor P/YeiP	PANTHER	PTHR30053	ELONGATION FACTOR P	coord: 14..113 coord: 114..213
IPR013852	Translation elongation factor P/YeiP, conserved site	PROSITE	PS01275	EFP	coord: 178..197
IPR011768	Translation elongation factor P	HAMAP	MF_00141	EF_P	coord: 55..213 score: 39.600998
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 156..213
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 114..157
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 52..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g12660.1	Cp4.1LG08g12660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
biological_process	GO:0043043	peptide biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003746	translation elongation factor activity