Cp4.1LG08g12590 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG08g12590
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptioninfluenza virus NS1A-binding protein homolog
LocationCp4.1LG08: 9003275 .. 9010089 (-)
RNA-Seq ExpressionCp4.1LG08g12590
SyntenyCp4.1LG08g12590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGTAATTCCAGGGGATGAATTTGTTGTGCGGGATGACACGTGTGACTTTGGTTACAATGTGCAGTGTATTATTTTAGTTTATGATTTTGACTAGATTTTTTTTTTTCACTCCTATATATGCCTGAATGAATTCAGGAAAGAGAGCTCTATATTTCAAGGCCGGATCTTCTGCTTGATTGAATGCTGCTGCAGTGTCCAGAATTTTGAGCTAGTGTGACCTTGGAAGCGTAACATTTGGATGTACAAACAGCATATGAAGGAGTGTCTTTCCAGCCAGCTTTTTGGTTCGTATCCCCAACTCAATTGATATTTTCTGCTTTTCTTTCCCTTTTTCTTTTACTTCTTTTACTGGTTTATATTTACACTTCAGCGCTTTGTTAGCTTAAAGAACATCATTTATTTTATTGGAAATTACACGGTGATATCCAATACTTTGTTCTTCTTCCAATTTTCCTTCCCTCTTCACTCTATGATTATCCTCTTGTTTTGTTTCGTTTCGTTTTTCTGCCCTTTGATACTAACATCTCTATTTTCCATCTGTATAGGTTTGCCTTCCCAACACTTTTCATATGTGTAGAATATCGATCCTGGTTTGCCTTTGTTTCTATTCAACTATAGGGAGAGAAACTTTTCATATGTGTAGAATATCAATCCTGGTCAGACGAATATTAATCCATATGGGTGGACTACTGATGGTTCAGAGAGAACACTTTATCCAGCTCAGGTTTGACCAGAAAATTTCCATACTTGTGTTGTCTCTCCTAAGTCGCACGATTTTAAAGATACTCAATGGTCATCACCAAGAAAATGCGGTTCACAGTCTTGTTCGGAAGCAGTGCCAACCTTTGTTAGAAAATCTGTTCAGACCTATAATTACAACTATGCCCCATTCATTTCTGGTTTGGGCTAGACCATGCTCAGACAAATAAGTTTATCTCTTTATTAGCATCTCAAGCCGTGGCTCCACATGTACCACAATTTACAATGAGGTGGAGACTTTTTGTACAGGCCTCCCCTCCTTGGAAATAAGGGATGAAAGTGAAAGATCAAACCACAAAATTCGGAGGAGCACTTTGACTTGGCAAGTCAAGTATCAGATGCTGTAGATGTTACTTCCTCATTAGACGCAGAAAACAGTGCATTTGGTGCTCATTCTGATGCAAATGAGGCCAATGGAGAGGAGAACTACCGAGTATTGCATAAACTACAACTGCCTATAATCATGAAAATCCAGTGTTGCCTTTAACAAGTGAGACAGATCATACTACCCTTAATAAGGACATGAATTTGGAGAATAATGGTAGTTTCGGTGAACCAATAAAGTCCATAGAGAGCAATGAAGAGGACTTTGGTTCTGTGACTGAACTTCAGTCTCTCATTGCTAAGGTAGTTACGGTATTGCATATATGATTTATATTTTTACGTATCTCTGAATCACGGCGTCTAATGTGTATTTTAATACTTCATCTCTCTGGTTGTAATTGGTTCAGGAGATACAAGAGCTAAAAAATTCTAAAGCAGATCAAGCTAAGAAAATAGTTTTCTTGGAGGAAAAGCTGGTACGTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCTTTATCTCTCTTCTGCTTGTACGTGCATATGCTTCTGTTGCGTGGTTGAATAGTGAGCTTTACGTTTTTGGCGGTGGTTATGGTAGTGCATGGCATAACACTGGTATTGACTTTTGCTCATATTATCGGATGTCTTTGTTTGTGTAGTAAAATAATTTCTCTCATTTTCATTTTTTGTTGTTGAAGTTGGATCATATAACCCGGAAACCGATGATTGGACTATGTGCCCTTCTGTAAATTTGGCCAAGGGAAGCCTTGGAGGAGTTAGCATTGGTAACAAACTATTTGCTGTTGGTGGTGGAAATGGCATTGAATCCTACTTAGATGTTGAAATGCTTGACTTAGATCTTGGACTATGGATTTAGACAAGGTCCATGCTACAAAAGGTAAAATGGTTATTTCTGCACGTCTCTTATGTTTAATTTTAAGTTTATCCACCTTCTATCTTGTTCCAAAAAATAAAAATAAGTTTATCCACCTCTTTCATAACACATGTTTCATTCGGTTAATTTTGCAAAATAGTTCTACCAAGTGTTGATTATGAGAAACAAATTTGCTTGGAGTTTTCTTTTCTAGCTTAATGGTAGGTCATTTGCCATGCTCGACTTAACCTCGGATATAAATCCATGCGAGGTCAATGCTACCGAGTGAAAACATATTCTTTGGCCAATTTGTCTACTTACCTTCTTAACCATTGCAGTTGCATTTTATCTGTTCACAATTTTTTATTCTCTTTTCTTATGAGATGTCAACAATTTATTTTCACTGCTTGATTATTTTCTTCCGCGATTTGCTGTTTCGGCAGTGGAGCTCAATGGCGTGCTTAGGTGGGCTTGATGGCAATGACTATTTGAAGTAAGATATCAGGACTTCTTATCTTTTTTTCTTTTCTTATCCATAAGAGATTTAATCAACGATCTCATTTGTTGCCCTTTGCATTCAAACTTGAGTTGGCTTGAAAGGTACAAAAATAGTTTTCATGGTCTCCCAATCTCTGCCTTTTCAGAACTGCTGACAGATTTGATATCCGAGAACATTCGTGGACCCAAATCCTCAGTATGAATGCAAAATGAGGATAGGCCATTCTTTGGTTACTTCAACGAGAAACCGTAAGCCATTTCTTGCACTACATTTTCCATGTTTTGTTTACTAGCTTGTGTTTAATATCTAGCATGTGGTAAGTTCTTTTTTCTTTCTTTCTTTGTTACATATAACTCTCCTGTGAAAAATACTTGCACTCTTTATTTAGATCAATCGAGAAGAGATTACACTCTGTAGAATACTACTATACTTTGCTACTTGAGACTAAAAATTTCTAGAATTTCTAGGGGTGATAAAAACATGGGTAGGGTAGAGGAGTATTTATAATAGATGGTACACAATTTATTCCTAAAATTTTAGTTATCTCTATTTCATTTTCTTAAAATATTTACATCATTTTTCTAAAATATATAAATAATAGGCTCATACAATTATTGGGTAAATCTCTAAAATATATAAATAATAGGCTCATATAATTATTGGCTAAATCTAATTGGGTTAGGGAAGATATCTGAACAATGAATAGATTAATGCTACACTTGCAAGCATAGTTTATAAATTTTCACATCCATGTTGGTAAATTTGTCAGGCCCGTATTTAATATTCTATACCGTACTTCGTAGTTATGGTCTTGGGGGATTCGATGGAGATTCCATGGCTTCGAGCGTTCGAGTATCTCATCCACCTTCGAAATTGTGGATCGTTGAGGAACCCATGAAAAAGACACGAGGATTGATATGCAGCAGCTGGAGGCATCAATGAATCCATGTGCATAATTGTGGCGGTAAGTTAATGATCTACCATATCCCTTCGTTCAGTAACTCCGAAAAATCAGATTTTCTTATAAAATAATCACAGCGATACTTCAAAGTACATTGCTCTGCTTACCATGAGGTTTGAATTTAAATTAGAATTTTTTGTATTAAAATATTTAAACCATAGATTATTATTATTATTTTTTATACGGTTATAAATTATTATTTAAAAAAACGAATATGTGCTGTGCCATAAATGGAAGTGGAAGACCCTACTGCTATTTTGCTATATAGGTTGAGAGTTAAAGGGTGTGGCTGGCAGGAAAAGACGTCGAGGGTTCTAAAGAAAAGCTCTACTTGCACGGTAATTTGGTAAATAATACTGAAATTCGATAGCTATGAAGATTTTCTCTTGAATAGAAAAGAGGCGGAGGCGTAAGTTACCGACTATTGATCTCACACATATTTGACTAGTAAAGTTTAGTCAAAATTGTTTGACAACTATTTTTATTTTTTATTTTGAAAAGTTAAAAGCCCATCTGATTTAGAAAATGTTTGTTTTTTGTTTTTTATTTTGAAAAGTTAAGCCTATGTGATTTAGAAAATGTTTGTTTTTATTTTTTTTTATTTGTTGAGTAGAAAATTTTGGGTTATGGAGTAGGCCTATATATAATATATATAGTAAATGACTATTTATGATAAAAAAAACAAATAATAGAAATATATATGTTATCTAGTAAAACTATATATACTATAGGCACGCATCTATTGTTTATACATAGCTGAAGTTTTCTACACGGTACATACGAAGTTTATATATATTTGAAGTTTTTTTGCTAGGTTATAGTACCATATTTGTTACGGTACATACTTGAAGTTTTTTTGCTAGGTTATAGTACCATATTTGTTACCGTACATACTTGAAGTTTTTTGTTATGCTATGATACCATATTTGTTACCGTACATACTTGAAGTTTTGTGCTATGTTATACTGGAAGAGTTTTTGCTATGTTATGGTACCATATTTGTTACCGTACATACTTGAAGTTTTGTGCTATGTTATACTGGAAGGGTTTTTGCTATGTTATGGTACCATATTTGTTACCGTACATACTTGAAGCTTTCTGCATTCTCTTTTATTATACATACTTGAAGTTTTTTTGCATTCTTTTTGTACATACCTAATTATTTATCTCTTCTTTTTCTATATTATCTCTTCCTAAGTTTACTCAGTTTTCTGCTTTCTTTGTATTCTCTGTATTTTCAATTCATGTATTCTCAGTTACTTGCTGCTTTTCTTGCTTTTTCTGTATTCTCAGTTACTTGCGACTTTTCTTACTTTTCCTGTATTCTCAGTTACTAGTTGATTTATTTTCTTGTTTTTCCTGTATTCTCAGTTACTAGTTGATTTATTTTCTTGTTTTTCCTGTATTCTCAGTTACTAGTTGATTTATTTTCTTGTTTTTCCTGTATTCTCAGTTACTAGTTGATTTATTTTCTTGCTTTTCCTGTATTCTCAGTTCCTGCTTTTCCTGTATTCTCAGTTCCTGCTTTTCCTGTATTTTCAGTTCCTGCTTTTCCTGTATTCTCAGTTCCTGCTTTTCCTGTATTCTCAGTTACTTGCTTCCTGTATTCATGTATTCTCAGTTCTTGTTTTTCCTGTATTCTTAGTTACTGCTTTTCCTGTATTCTCAGTTCCTGCTTTTCCTGTATTCTCGCTTTTCCTGTATTCTCAGTTACTTGCTTCCTGTATTCATGTATTCTCAGTTCCTGCTTTTCCTGTATTCTCAGTTACTTGCTTCCTGTATTCATGTATTCTCAGTTCTTGTTTTTCCTGTATTCTTAGTTACTGCTTTTCCTGTATTCCTGTATTCTCAGTTACTGCTTTTTCTGTATTCCTGTATTCTCAGTTACTGCTTTTTCTGTATTCCTGTATTCTCAGTTACTGCTTTTCCTGTATTCTCGTATTCTTAGTTACTGCTTTTCCTGTATTCTCGGTTCCTGCTTTTCCTGTATTCTTGTATTCTTAGTTACTGCTTTTCCTGTATTCCTGTATTCTCGATTCCTGCTTTTCCTGTATTCTCGGTTCCTGCTTTTCCTGTATTCTCGGTTCTTGCTTTCTTAATTACTGCTTATTCTCAGTTCTTGCTTTTCCTGTATTCCTGTATTCTCATTTACGTATTCTCAATATCTATATTTTCAGTTTTTGCTTTTTCTATATTCTTAGTTTCTGCTTCAGTTTCTTTTTGTATTCTGTTTTCTCTGTATTCTCAGTTTCTGCTTTGCTCTTCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTTCTTGTATTCTGAGTTTCTACTTTGCTCTGCCTGTATTCTCAGTTACTGCTTTTCCTATATTCAGTTTCTTTCCATTTGTGCTTTCCTGCATTCTCAGTTTCAAAGTATTTTATGAAAATGAGTTGGGTAAATAATTTCATAAAATTGATAATAAATAATGTTATCAAATATGCTCCTGACAATTTATCTTGTAATTTTTTAAACTCCACAAAAAAAAATTAATAATTTTATTTATAACGTTGACAAATGATGCTTACCCAATTAAATGACAAAAGGTTATGTGTGTGAGAGAGATATGCTTAGGCTTAGGGTAAAAATGATAAATAAAGTGTATTTCATTATTAAATTATAAATTAAGAGGTTTGAAATGAAAACATTCTAAAATGTTTTCTCCCGTATAATATCGGTAACGACTTCAATTTTTCTTCCAAAGCCCATATATAGAAACAAACTGAATCATCCTTAGCTAGCTAAAGGTTCTAAGCAAGCCCACATGTAATTGAAATTGAACAAAATTATGATAGTGCTGTACTCATTTAATCATGAACCTATTAGCACACAATCTTTTTAATGATTTATCCTGTCAGTGCCTCTAGCCAACCACTGCTTAATTAATTGTGCATAAAAAATTATATTGAAAAAAATCGATAGATTGTGTTGAGGAAGCAAACAAAGAAAAGTCCAAGTTTATATATACGTGTGTATGTATGAATATGTATATATAAATCTAAAAATTAGACGCGATTGCTCTAA

mRNA sequence

ATGAATAATATCAATCCTGGTCAGACGAATATTAATCCATATGGGTGGACTACTGATGGTTCAGAGAGAACACTTTATCCAGCTCAGATCAAACCACAAAATTCGGAGGAGCACTTTGACTTGGCAAGTCAAGTATCAGATGCTGTAGATGTTACTTCCTCATTAGACGCAGAAAACAGTGCATTTGGTGCTCATTCTGATGCAAATGAGGCCAATGGAGAGGAGAACTACCGAAATAATGGTAGTTTCGGTGAACCAATAAAGTCCATAGAGAGCAATGAAGAGGACTTTGGTTCTGTGACTGAACTTCAGTCTCTCATTGCTAAGATGTCAACAATTTATTTTCACTGCTTGATTATTTTCTTCCGCGATTTGCTGTTTCGGCAGTGGAGCTCAATGGCGTGCTTAGGTGGGCTTGATGGCAATGACTATTTGAATTATGGTCTTGGGGGATTCGATGGAGATTCCATGGCTTCGAGCGTTCGAGTATCTCATCCACCTTCGAAATTGTGGATCGTTGAGGAACCCATGAAAAAGACACGAGGATTGATATGCAGCAGCTGGAGGCATCAATGAATCCATGTGCATAATTGTGGCGGTTGAGAGTTAAAGGGTGTGGCTGGCAGGAAAAGACGTCGAGGGTTCTAAAGAAAAGCTCTACTTGCACGGTAATTTGGTAAATAATACTGAAATTCGATAGCTATGAAGATTTTCTCTTGAATAGAAAAGAGGCGGAGGCGTAAGTTACCGACTATTGATCTCACACATATTTGACTAGTAAAGTTTAGTCAAAATTGTTTGACAACTATTTTTATTTTTTATTTTGAAAAGTTAAAAGCCCATCTGATTTAGAAAATGTTTGTTTTTTGTTTTTTATTTTGAAAAGTTAAGCCTATGTGATTTAGAAAATGTTTGTTTTTATTTTTTTTTATTTGTTGAGTAGAAAATTTTGGGTTATGGAGTAGGCCTATATATAATATATATAGTAAATGACTATTTATGATAAAAAAAACAAATAATAGAAATATATATGTTATCTAGTAAAACTATATATACTATAGGCACGCATCTATTGTTTATACATAGCTGAAGTTTTCTACACGGTACATACGAAGTTTATATATATTTGAAGTTTTTTTGCTAGGTTATAGTACCATATTTGTTACGGTACATACTTGAAGTTTTTTTGCTAGGTTATAGTACCATATTTGTTACCGTACATACTTGAAGTTTTTTGTTATGCTATGATACCATATTTGTTACCGTACATACTTGAAGTTTTGTGCTATGTTATACTGGAAGAGTTTTTGCTATGTTATGGTACCATATTTGTTACCGTACATACTTGAAGTTTTGTGCTATGTTATACTGGAAGGGTTTTTGCTATGTTATGGTACCATATTTGTTACCGTACATACTTGAAGCTTTCTGCATTCTCTTTTATTATACATACTTGAAGTTTTTTTGCATTCTTTTTGTACATACCTAATTATTTATCTCTTCTTTTTCTATATTATCTCTTCCTAAGTTTACTCAGTTTTCTGCTTTCTTTGTATTCTCTGTATTTTCAATTCATGTATTCTCAGTTACTTGCTGCTTTTCTTGCTTTTTCTGTATTCTCAGTTACTTGCGACTTTTCTTACTTTTCCTGTATTCTCAGTTACTAGTTGATTTATTTTCTTGTTTTTCCTGTATTCTCAGTTACTAGTTGATTTATTTTCTTGTTTTTCCTGTATTCTCAGTTACTAGTTGATTTATTTTCTTGTTTTTCCTGTATTCTCAGTTACTAGTTGATTTATTTTCTTGCTTTTCCTGTATTCTCAGTTCCTGCTTTTCCTGTATTCTCAGTTCCTGCTTTTCCTGTATTTTCAGTTCCTGCTTTTCCTGTATTCTCAGTTCCTGCTTTTCCTGTATTCTCAGTTACTTGCTTCCTGTATTCATGTATTCTCAGTTCTTGTTTTTCCTGTATTCTTAGTTACTGCTTTTCCTGTATTCTCAGTTCCTGCTTTTCCTGTATTCTCGCTTTTCCTGTATTCTCAGTTACTTGCTTCCTGTATTCATGTATTCTCAGTTCCTGCTTTTCCTGTATTCTCAGTTACTTGCTTCCTGTATTCATGTATTCTCAGTTCTTGTTTTTCCTGTATTCTTAGTTACTGCTTTTCCTGTATTCCTGTATTCTCAGTTACTGCTTTTTCTGTATTCCTGTATTCTCAGTTACTGCTTTTTCTGTATTCCTGTATTCTCAGTTACTGCTTTTCCTGTATTCTCGTATTCTTAGTTACTGCTTTTCCTGTATTCTCGGTTCCTGCTTTTCCTGTATTCTTGTATTCTTAGTTACTGCTTTTCCTGTATTCCTGTATTCTCGATTCCTGCTTTTCCTGTATTCTCGGTTCCTGCTTTTCCTGTATTCTCGGTTCTTGCTTTCTTAATTACTGCTTATTCTCAGTTCTTGCTTTTCCTGTATTCCTGTATTCTCATTTACGTATTCTCAATATCTATATTTTCAGTTTTTGCTTTTTCTATATTCTTAGTTTCTGCTTCAGTTTCTTTTTGTATTCTGTTTTCTCTGTATTCTCAGTTTCTGCTTTGCTCTTCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTGCCTGTATTCTCAGTTTCTGCTTTGCTCTTCTTGTATTCTGAGTTTCTACTTTGCTCTGCCTGTATTCTCAGTTACTGCTTTTCCTATATTCAGTTTCTTTCCATTTGTGCTTTCCTGCATTCTCAGTTTCAAAGTATTTTATGAAAATGAGTTGGGTAAATAATTTCATAAAATTGATAATAAATAATGTTATCAAATATGCTCCTGACAATTTATCTTGTAATTTTTTAAACTCCACAAAAAAAAATTAATAATTTTATTTATAACGTTGACAAATGATGCTTACCCAATTAAATGACAAAAGGTTATGTGTGTGAGAGAGATATGCTTAGGCTTAGGGTAAAAATGATAAATAAAGTGTATTTCATTATTAAATTATAAATTAAGAGGTTTGAAATGAAAACATTCTAAAATGTTTTCTCCCGTATAATATCGGTAACGACTTCAATTTTTCTTCCAAAGCCCATATATAGAAACAAACTGAATCATCCTTAGCTAGCTAAAGGTTCTAAGCAAGCCCACATGTAATTGAAATTGAACAAAATTATGATAGTGCTGTACTCATTTAATCATGAACCTATTAGCACACAATCTTTTTAATGATTTATCCTGTCAGTGCCTCTAGCCAACCACTGCTTAATTAATTGTGCATAAAAAATTATATTGAAAAAAATCGATAGATTGTGTTGAGGAAGCAAACAAAGAAAAGTCCAAGTTTATATATACGTGTGTATGTATGAATATGTATATATAAATCTAAAAATTAGACGCGATTGCTCTAA

Coding sequence (CDS)

ATGAATAATATCAATCCTGGTCAGACGAATATTAATCCATATGGGTGGACTACTGATGGTTCAGAGAGAACACTTTATCCAGCTCAGATCAAACCACAAAATTCGGAGGAGCACTTTGACTTGGCAAGTCAAGTATCAGATGCTGTAGATGTTACTTCCTCATTAGACGCAGAAAACAGTGCATTTGGTGCTCATTCTGATGCAAATGAGGCCAATGGAGAGGAGAACTACCGAAATAATGGTAGTTTCGGTGAACCAATAAAGTCCATAGAGAGCAATGAAGAGGACTTTGGTTCTGTGACTGAACTTCAGTCTCTCATTGCTAAGATGTCAACAATTTATTTTCACTGCTTGATTATTTTCTTCCGCGATTTGCTGTTTCGGCAGTGGAGCTCAATGGCGTGCTTAGGTGGGCTTGATGGCAATGACTATTTGAATTATGGTCTTGGGGGATTCGATGGAGATTCCATGGCTTCGAGCGTTCGAGTATCTCATCCACCTTCGAAATTGTGGATCGTTGAGGAACCCATGAAAAAGACACGAGGATTGATATGCAGCAGCTGGAGGCATCAATGA

Protein sequence

MNNINPGQTNINPYGWTTDGSERTLYPAQIKPQNSEEHFDLASQVSDAVDVTSSLDAENSAFGAHSDANEANGEENYRNNGSFGEPIKSIESNEEDFGSVTELQSLIAKMSTIYFHCLIIFFRDLLFRQWSSMACLGGLDGNDYLNYGLGGFDGDSMASSVRVSHPPSKLWIVEEPMKKTRGLICSSWRHQ
Homology
[Close]
BLAST of Cp4.1LG08g12590 vs. NCBI nr
Match: KAG7027877.1 (Influenza virus NS1A-binding protein-like A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 111 bits (278), Expect = 1.25e-26
Identity = 68/98 (69.39%), Postives = 70/98 (71.43%), Query Frame = 0 

Query: 41  LASQVSDAVDVTSSLDAENSAFGAHSDANEANGEENYR---------------------- 100
           +ASQVSDAVDVTSSLDAENSAFGAHSDANEANGEE YR                      
Sbjct: 1   MASQVSDAVDVTSSLDAENSAFGAHSDANEANGEEKYRVLHKLQLPIIMKIQDHTTLSKD 60

Query: 101 ----NNGSFGEPIKSIESNEEDFGSVTELQSLIAKMST 112
               NNGSFGEPIKSIESNEEDFGSVTELQSLIAK+ T
Sbjct: 61  MNLENNGSFGEPIKSIESNEEDFGSVTELQSLIAKVVT 98

[Close]
BLAST of Cp4.1LG08g12590 vs. NCBI nr
Match: XP_022157257.1 (influenza virus NS1A-binding protein homolog [Momordica charantia])

HSP 1 Score: 98.6 bits (244), Expect = 4.72e-20
Identity = 80/220 (36.36%), Postives = 87/220 (39.55%), Query Frame = 0 

Query: 7   GQTNINPYGWTTDGSERTLYPAQ------------------------------------- 66
           GQ NINPYGWTTDGSERTLYPAQ                                     
Sbjct: 92  GQMNINPYGWTTDGSERTLYPAQVQIHVRMECQPLLENQFKPIITDNYYGPSHFWFELDH 151

Query: 67  --------------------------------------------IKPQNSEEHFDLASQV 110
                                                       IKP+  EEHFDLASQV
Sbjct: 152 AQTNKLISLLASQAVASRVPQFTTKWRTFCTGLSSLETSDGSDKIKPEILEEHFDLASQV 211

[Close]
BLAST of Cp4.1LG08g12590 vs. NCBI nr
Match: XP_038905252.1 (kelch-like protein 36 [Benincasa hispida] >XP_038905253.1 kelch-like protein 36 [Benincasa hispida] >XP_038905254.1 kelch-like protein 36 [Benincasa hispida] >XP_038905255.1 kelch-like protein 36 [Benincasa hispida] >XP_038905256.1 kelch-like protein 36 [Benincasa hispida] >XP_038905257.1 kelch-like protein 36 [Benincasa hispida])

HSP 1 Score: 97.4 bits (241), Expect = 1.19e-19
Identity = 81/221 (36.65%), Postives = 85/221 (38.46%), Query Frame = 0 

Query: 7   GQTNINPYGWTTDGSERTLYPAQ------------------------------------- 66
           GQ NINPYGWTTDGSERTLYPAQ                                     
Sbjct: 92  GQMNINPYGWTTDGSERTLYPAQVQILVRKQCQPLLENQFKPIITDNYYGPNHFWFELDH 151

Query: 67  --------------------------------------------IKPQNSEEHFDLASQV 110
                                                       IKPQ  E  FDLASQV
Sbjct: 152 SQTKKLISLLASQAMTPNVPQSSTNCRPFCTVLPSLETTEGSEKIKPQIMEVDFDLASQV 211

[Close]
BLAST of Cp4.1LG08g12590 vs. NCBI nr
Match: XP_023527355.1 (influenza virus NS1A-binding protein homolog [Cucurbita pepo subsp. pepo] >XP_023527356.1 influenza virus NS1A-binding protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 95.9 bits (237), Expect = 4.08e-19
Identity = 81/221 (36.65%), Postives = 86/221 (38.91%), Query Frame = 0 

Query: 7   GQTNINPYGWTTDGSERTLYPAQ------------------------------------- 66
           GQ NINPYGWTTDGSERTLYPAQ                                     
Sbjct: 92  GQININPYGWTTDGSERTLYPAQVQILVRKLCQPLLENQFKPIIKDNYYSPNHFWFELDH 151

Query: 67  --------------------------------------------IKPQNSEEHFDLASQV 110
                                                       IK Q  EEHFDL SQV
Sbjct: 152 AQTNKLISLLSSQAMTPHVPQFTTNCKPCCTVLPSLESRDEGEKIKSQIMEEHFDLESQV 211

[Close]
BLAST of Cp4.1LG08g12590 vs. NCBI nr
Match: XP_022982773.1 (influenza virus NS1A-binding protein homolog [Cucurbita maxima] >XP_022982774.1 influenza virus NS1A-binding protein homolog [Cucurbita maxima])

HSP 1 Score: 95.5 bits (236), Expect = 5.56e-19
Identity = 100/335 (29.85%), Postives = 119/335 (35.52%), Query Frame = 0 

Query: 7   GQTNINPYGWTTDGSERTLYPAQ------------------------------------- 66
           GQ NINPYGWTTDGSERTLYPAQ                                     
Sbjct: 92  GQININPYGWTTDGSERTLYPAQVQILVRKLCQPLLENQFKPIIKDNYYSPNHFWFELDH 151

Query: 67  --------------------------------------------IKPQNSEEHFDLASQV 126
                                                       IK Q  EEHFDL SQV
Sbjct: 152 AQTNKLISLLSSQAMTPHVPQFTTNCRPCCTVLPSLESRDEGEKIKSQIMEEHFDLESQV 211

Query: 127 SDAVDVTSSLDAENSAFGAHSDANEANGE------------------------------- 186
            DAVDVTSSLDA NS+ GAH  ANE++ E                               
Sbjct: 212 VDAVDVTSSLDAGNSSLGAHCYANESDEELKCRILHKLQQFAIKHHESSMLPLTSDMNHT 271

Query: 187 -----ENYRNNGSFGEPIKSIESNEEDFGSVTELQSLIAKM---------STIYFHCLII 188
                 N  NNGS GEPIKS ESNEEDFG++T LQS IAK+         S       I+
Sbjct: 272 TINKGNNLVNNGSSGEPIKSKESNEEDFGTLTGLQSPIAKLVQELQELKDSNAEQARRIV 331

[Close]
BLAST of Cp4.1LG08g12590 vs. ExPASy TrEMBL
Match: A0A6J1DU24 (influenza virus NS1A-binding protein homolog OS=Momordica charantia OX=3673 GN=LOC111024010 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.29e-20
Identity = 80/220 (36.36%), Postives = 87/220 (39.55%), Query Frame = 0 

Query: 7   GQTNINPYGWTTDGSERTLYPAQ------------------------------------- 66
           GQ NINPYGWTTDGSERTLYPAQ                                     
Sbjct: 92  GQMNINPYGWTTDGSERTLYPAQVQIHVRMECQPLLENQFKPIITDNYYGPSHFWFELDH 151

Query: 67  --------------------------------------------IKPQNSEEHFDLASQV 110
                                                       IKP+  EEHFDLASQV
Sbjct: 152 AQTNKLISLLASQAVASRVPQFTTKWRTFCTGLSSLETSDGSDKIKPEILEEHFDLASQV 211

[Close]
BLAST of Cp4.1LG08g12590 vs. ExPASy TrEMBL
Match: A0A6J1J5H4 (influenza virus NS1A-binding protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111481533 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.69e-19
Identity = 100/335 (29.85%), Postives = 119/335 (35.52%), Query Frame = 0 

Query: 7   GQTNINPYGWTTDGSERTLYPAQ------------------------------------- 66
           GQ NINPYGWTTDGSERTLYPAQ                                     
Sbjct: 92  GQININPYGWTTDGSERTLYPAQVQILVRKLCQPLLENQFKPIIKDNYYSPNHFWFELDH 151

Query: 67  --------------------------------------------IKPQNSEEHFDLASQV 126
                                                       IK Q  EEHFDL SQV
Sbjct: 152 AQTNKLISLLSSQAMTPHVPQFTTNCRPCCTVLPSLESRDEGEKIKSQIMEEHFDLESQV 211

Query: 127 SDAVDVTSSLDAENSAFGAHSDANEANGE------------------------------- 186
            DAVDVTSSLDA NS+ GAH  ANE++ E                               
Sbjct: 212 VDAVDVTSSLDAGNSSLGAHCYANESDEELKCRILHKLQQFAIKHHESSMLPLTSDMNHT 271

Query: 187 -----ENYRNNGSFGEPIKSIESNEEDFGSVTELQSLIAKM---------STIYFHCLII 188
                 N  NNGS GEPIKS ESNEEDFG++T LQS IAK+         S       I+
Sbjct: 272 TINKGNNLVNNGSSGEPIKSKESNEEDFGTLTGLQSPIAKLVQELQELKDSNAEQARRIV 331

[Close]
BLAST of Cp4.1LG08g12590 vs. ExPASy TrEMBL
Match: A0A6J1F1G5 (influenza virus NS1A-binding protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441514 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 9.22e-19
Identity = 80/221 (36.20%), Postives = 86/221 (38.91%), Query Frame = 0 

Query: 7   GQTNINPYGWTTDGSERTLYPAQ------------------------------------- 66
           GQ NINPYGWTTDGSERTLYPAQ                                     
Sbjct: 92  GQININPYGWTTDGSERTLYPAQVQILVRKLCQPLLENQFKPIIKDNYYSPNHFWFELDH 151

Query: 67  --------------------------------------------IKPQNSEEHFDLASQV 110
                                                       IK Q  EEHFDL SQV
Sbjct: 152 AQTNKLISLLSSQAMTLHVPQFTTNCKPCCTVLPSLESRDEGEKIKSQIMEEHFDLESQV 211

[Close]
BLAST of Cp4.1LG08g12590 vs. ExPASy TrEMBL
Match: A0A0A0L9S8 (DCD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G730840 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.87e-14
Identity = 57/143 (39.86%), Postives = 68/143 (47.55%), Query Frame = 0 

Query: 4   INPGQTNINPYGWTTDGSERTLYPAQIKPQNSEEHFDLASQVSDAVDVTSSLDAENSAFG 63
           + P  TN  P+       E      +IKPQN +  +DLASQV+D +DVTSSLDA NSAF 
Sbjct: 170 VRPSTTNHRPFCTVLPSLETREGSEKIKPQNMDVQWDLASQVADTIDVTSSLDAGNSAFE 229

Query: 64  AHSDANEANGEE------------------------------------NYRNNGSFGEPI 110
            H D NE N EE                                    N  N+  + EPI
Sbjct: 230 VHCDENEVNEEEKNRLLHKLQELARNHHESPMLPLTSDTDHTALNKDKNLENSDRYVEPI 289

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BLAST of Cp4.1LG08g12590 vs. ExPASy TrEMBL
Match: A0A1S3B528 (kelch-like protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486256 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.24e-12
Identity = 61/148 (41.22%), Postives = 70/148 (47.30%), Query Frame = 0 

Query: 4   INPGQTNINPYGW------TTDGSERTLYPAQIKPQNSEEHFDLASQVSDAVDVTSSLDA 63
           + P  TN  P+        T DGSE+      IKPQ  +   DLASQ +D +DVTSSLDA
Sbjct: 170 VRPSTTNRRPFCTVLPSLETRDGSEK------IKPQIMDVQCDLASQEADTIDVTSSLDA 229

Query: 64  ENSAFGAHSDANEANGEE-----------------------------------NYRNNGS 110
            NSAFGAH DANE N EE                                   N  NN  
Sbjct: 230 GNSAFGAHCDANEVNEEESLLLHKLEQLARNLHASPMLPLTSDTDHTALNKDENLENNDR 289

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BLAST of Cp4.1LG08g12590 vs. TAIR 10
Match: AT5G01660.1 (CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 1.5e-05
Identity = 27/86 (31.40%), Postives = 36/86 (41.86%), Query Frame = 0 

Query: 131 SSMACLGGLDGNDYLN----------------------------------YGLGGFDGDS 183
           SS+  +GG DG +YLN                                  Y +GGFDG++
Sbjct: 515 SSIYAVGGYDGKEYLNTAERFDPREHSWMNIASMKSRRGCHSLVVLNEKLYAIGGFDGET 574


HSP 2 Score: 46.6 bits (109), Expect = 2.6e-05
Identity = 18/24 (75.00%), Postives = 21/24 (87.50%), Query Frame = 0 

Query: 7   GQTNINPYGWTTDGSERTLYPAQI 31
           GQ N +PYGWT+DGSERT YPAQ+
Sbjct: 78  GQLNFDPYGWTSDGSERTSYPAQV 101

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g12590 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG08g12590 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7027877.11.25e-2669.39Influenza virus NS1A-binding protein-like A, partial [Cucurbita argyrosperma sub... [more]
XP_022157257.14.72e-2036.36influenza virus NS1A-binding protein homolog [Momordica charantia][more]
XP_038905252.11.19e-1936.65kelch-like protein 36 [Benincasa hispida] >XP_038905253.1 kelch-like protein 36 ... [more]
XP_023527355.14.08e-1936.65influenza virus NS1A-binding protein homolog [Cucurbita pepo subsp. pepo] >XP_02... [more]
XP_022982773.15.56e-1929.85influenza virus NS1A-binding protein homolog [Cucurbita maxima] >XP_022982774.1 ... [more]
BLAST of Cp4.1LG08g12590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DU242.29e-2036.36influenza virus NS1A-binding protein homolog OS=Momordica charantia OX=3673 GN=L... [more]
A0A6J1J5H42.69e-1929.85influenza virus NS1A-binding protein homolog OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1F1G59.22e-1936.20influenza virus NS1A-binding protein homolog OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A0A0L9S85.87e-1439.86DCD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G730840 PE=4 SV... [more]
A0A1S3B5282.24e-1241.22kelch-like protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486256 PE=4 SV=... [more]
BLAST of Cp4.1LG08g12590 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G01660.11.5e-0531.40CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IP... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..85
NoneNo IPR availablePANTHERPTHR46034:SF7INFLUENZA VIRUS NS1A-BINDING PROTEINcoord: 6..31
IPR044832DCD domain-containing protein NRP-likePANTHERPTHR46034FAMILY NOT NAMEDcoord: 6..31

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g12590.1Cp4.1LG08g12590.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034976 response to endoplasmic reticulum stress