Cp4.1LG08g12270 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG08g12270
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionprotein SIEL
LocationCp4.1LG08: 8999455 .. 9006264 (+)
RNA-Seq ExpressionCp4.1LG08g12270
SyntenyCp4.1LG08g12270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATCAATGGCGGAGCGGGATCCGGAACTCGTTTATGTCATTGACGAACTCGACGATCAGTCATTCTTCTCGCTTTGCTTTGTTCCTTCAGCGTCCATCAGACCTTGGCCTCACAATAACACCGAGAGGTTCCAAATAAGGCCATCGCAGTTATTCACTGTTTTCCTAGGGTTTACGAAGGATCCGTATCATTATGTTAGAAAAGCTGTTACAGATTGCAGGTTTGTGGAATAGAGTTCTCGAAGACGGCAGCATGATTGAAGGTTTCTATTGCGTGCTATTGAGCTTCTAAACGACGTGGAACATTTTGTTAGATCATCTGCGATACGCATTATAAGACACTCGTTCTCCAGATCTCTCTTCATTGATTCTGTTTTTACAACATGAAGATTGTTATGAAGTGATTTCAGTTCGGTAGTAAGTCGCTGTTCCTTAAGATTCATAGTCCTCTATTTGATATATACATAGATGTTTGATGAGTTGATGACGAACACTAATTATTTACTGTGATATATACACGGAATATCATGTTCCTTTAGCAGTAACACCTCTTCGAGATTGATACAGGTCATCACCTGAGATCTAATGGTTGCGGCGCATAGTCCAGAGAGGAAACTATTTGTCTGATGAAATATTCGGTAACGTAAGTTTAAAGTGTACTATGCTGTTGATTTCTCTGGATTGTTGATATTTACTCATTTGAAGAAGTTATCATTTATTGTTTACGGTGCTGTTCTTAACTAGATTTTGAGATATCATTTTCATCTAGAGTTGTATTGATACATAATATTTCTCCGTAACTCGTTAGATTGCTTGGTTGAGATTATCCATTCCATATAGGTAGTTCCATCTCTTGCACTCATCCATTCGATGAAGCTGGTTTCTCATTCACGAAGATTGAGAACAAAAATATGAAGAATTTAGAGTACATTGTGACTTTTTCACATGTTCACGACTGTCTCTGTCTTTTCAATGCTCATGTATGAATACTCTTACTGTTACTATTAGAACAAAGTTGTTTGGATACCATTAGTGTGGTGTGCAGATTGACAAACTTACTTGGACCTAGTCCTGGTTTGTCTCTGGATAGGCTTTTTCTCTTTGCTTGCGGTGAAACGACTCGGTTTTAGGTATTCATTCCTTGGTTGTGTGTAACTTTAGATGCGATTTCTCTTTTCCATGTCCGTCTCTCTCAGTTCTCATGTTTAGTGTTTAGAACTTTACACTTTGAATAGTGTTTACACGTGGACAGGTCACATTTCCTTAGGAGAACTTTAAGGAAGTGATCGCTATTTTCCCATGCTAACTGAACTTTAGGAAGTGCTTTCCTTGAGTTAAGGCTTAAAGTGAGTGCTTCGATTTTCGAACTTGTAGCTACAAAGTGACTCTTCCGATATCTGTATTGGTAATATCATCTTTGTTCCATGACGAGAGATATGAGCATGAAGGTCAGGGCTAATGCGTTTTATGCAATAAAGAAGTTTGAAATTGTTTCCGAGGATCTCCTTCTATAAAGCTTCTCCTAGAGAGTCTTGAGTAGAAGATGAATTCTATCAGGTAACTTATGTTTGTATATATGATTGAAATGTACCCCTATATCTCCAAAATCGTTGTAATCAATCATTCTTGTCACGCTTTTCTTTTCTAAATTTAATCTTGTAGTTTCTTCATGTTTTACGCCACGAGGCCTTCGTTGATAGTTTTTCATCTTGCTTGTTTAAGCACCTTACCATTACCATAATGATTCTCAGTATCCTCCTGCAAACGCATTATCTTATTAGATTGCAGTGTTAAATGATTTTAAGTGGACAATCACTGGCTTTTTTTTTTTTCGAGAGAGAGATAAAAGACAATCCAGGAAATGAATAGAAGCTTTACAGAATGAAATCCCGTCTTGTAAATCAGATATACTTGCCATTGCTTCTCTTAAGACGCCTGCAAGATACATGTGCAGCAGCTCAAAGATGGTGATGCCATAGAATCTATCAAGACTATGGTGCAAGACTTTGAGGTTTGTATATCAATTACTTTGCTGAACTTTTTTTGAGGTCATACACTAAATGAATTGTTCTTTACGTATGGTAATACTATGAAGCTTTTATTAGAACGTACAAGGTCAGTTGCCTATGCTGATAAAGTCAATGTTCCTTTTTTTTTTTTTTTTTGAAAAAAGATAAACAATCCAATGCCCTGAAAATTTTGAGCTATTGAAATTTTGTTCTTATCTTAGGTGGAAAGAAAAATTTAGTGTTCGGTGATAAGGCAAAATAACAGAGTGGATAGATCATAGAAGTTTTTGAGCTACCTATGTTCTGTTCTGCCCTTTGGTTGCATTAAATCGTGCCTTTAGTCACTATACTCCAAGTGTATCAAACACTTGTTGGGGTGGCTTTTGGAAGTTAATTGGGGTGGGGGATGTTTGTTTTTGCGTAGTGTCGGTACAGTTTTTCCATGGAATGGAGGTTTACTTTTATTCTGTTCATCATTCCAAAAAATGCTTTATCCTTTTCTCTTTAGTTCTCATCCTAATCATTGGCAGGCAAGTATTCATATTTGACCATCTTTGGTCTTACTTCCTCATATTTTCGTCGTTGCAGATTTTGCAAGGAAGCATTGGGAGTATTCACGTATCAAACGGACAGATACAGTGGTTCCTTAGCTTTTACAATGCAGTATCTCAAGATAAAGAAGCTGGCTGCAAAGGTATGGAATTTGATGTCTTCAAAACATTAGTCCTCGTAGAATTGAAGAATGGGAACTCTTATTGGGAAAGCTAGCATGGGGAGATATAGGGGTACATTTCGATCAACTTTTGTATCTGAAGTTCAAATAGGATTGTCGAAGCTAGGCACCATTACTCCTAAATCTTCTTGCAATTCACTTGACTTGGGAAAACTGGTTAAATCTTTCACCCTTAACCATCTAGAAATTTCCGAAAAACTTGAGCCCGTCAAGGCAGAACTAGTGATTCCAGATAATAATGACTATGAAAACCCCCTCTATTTTGTTCCAGGACTACTACCCGTTGGTATTCCTTGCCAAATTATCCTACACAATGTTCCAAGTGAGAGGAAGTTGTGGCTTAGAATCACTTTAGATAACATGACAAGCCAGTTTATCTTTTGGATTTCCTTCCCTTGGGAGGCTGTGACGAGGTTAGAGATTTTACATATATTGTTCCATTCTATAGAAACTCCAAAAGCTTCTCATTTTATAGCTAGGACTTGAATGTTGGTTTGAGAATGCTGAAGTTAATGAACGCCGTGGAGGTCCAAAACGTGATCCAGCACACATTTGTAAAGAGAAGGACGTATATCTTTCCATGATCAACGAAGGTTGGTTTTGCGTAGGGCTCAATTAGAATATCAGTCTGTAATATTTAAAGAACGATGATTCCGTCATGCAGAAATTGTTATGGAGATTCGAAGAAAATCAGCAATATCAAGTGTAAGGCATCCATCTTATCCATCTTATATATAGTTCAAATGCTTACTGCTCCTGGAGATACCTTGGACATCCAAAGCTCTGCGTATTAATCATTCTTTTAAAGGTATTTCCTTTTTCCATCTTCAAATATTTTATTCTCGAGAACAACATAAAAGAAACCTACACACTTGGTTGTTTTTGTTTCTAAAGGCTTTGCTAACCTTGACACTTGTCATTTATAAATAGCGTTGACATGAGAGTGCATAACCTTGGCAATAACTGATGCAATAAAGGCAATATGTTCCCAGGTATGTGAATTCGCTATTCCTTGGTAATTTTGGTTGCACTTTTATTATTATTACTCGAACTCATTATAGAAAGAAACATGGAATTAATTAGAGCAATCGCGTCTAATTTTTAGATTTATATATACATATTCATACATACACACGTATATATAAACTTGGACTTTTCTTTGTTTGCTTCCTCAACACAATCTATCGATTTTTTTCAATATAATTTTTTATGCACAATTAATTAAGCAGTGGTTGGCTAGAGGCACTGACAGGATAAATCATTAAAAAGATTGTGTGCTAATAGGTTCATGATTAAATGAGTACAGCACTATCATAATTTTGTTCAATTTCAATTACATGTGGGCTTGCTTAGAACCTTTAGCTAGCTAAGGATGATTCAGTTTGTTTCTATATATGGGCTTTGGAAGAAAAATTGAAGTCGTTACCGATATTATACGGGAGAAAACATTTTAGAATGTTTTCATTTCAAACCTCTTAATTTATAATTTAATAATGAAATACACTTTATTTATCATTTTTACCCTAAGCCTAAGCATATCTCTCTCACACACATAACCTTTTGTCATTTAATTGGGTAAGCATCATTTGTCAACGTTATAAATAAAATTATTAATTTTTTTTTGTGGAGTTTAAAAAATTACAAGATAAATTGTCAGGAGCATATTTGATAACATTATTTATTATCAATTTTATGAAATTATTTACCCAACTCATTTTCATAAAATACTTTGAAACTGAGAATGCAGGAAAGCACAAATGGAAAGAAACTGAATATAGGAAAAGCAGTAACTGAGAATACAGGCAGAGCAAAGTAGAAACTCAGAATACAAGAAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGAAGAGCAAAGCAGAAACTGAGAATACAGAGAAAACAGAATACAAAAAGAAACTGAAGCAGAAACTAAGAATATAGAAAAAGCAAAAACTGAAAATATAGATATTGAGAATACGTAAATGAGAATACAGGAATACAGGAAAAGCAAGAACTGAGAATAAGCAGTAATTAAGAAAGCAAGAACCGAGAATACAGGAAAAGCAGGAACCGAGAATACAGGAAAAGCAGGAATCGAGAATACAGGAATACAGGAAAAGCAGTAACTAAGAATACAAGAATACAGGAAAAGCAGGAACCGAGAATACAGGAAAAGCAGTAACTAAGAATACGAGAATACAGGAAAAGCAGTAACTGAGAATACAGGAATACAGAAAAAGCAGTAACTGAGAATACAGGAATACAGAAAAAGCAGTAACTGAGAATACAGGAATACAGGAAAAGCAGTAACTAAGAATACAGGAAAAACAAGAACTGAGAATACATGAATACAGGAAGCAAGTAACTGAGAATACAGGAAAAGCAGGAACTGAGAATACATGAATACAGGAAGCAAGTAACTGAGAATACAGGAAAAGCGAGAATACAGGAAAAGCAGGAACTGAGAATACAGGAAAAGCAGTAACTAAGAATACAGGAAAAACAAGAACTGAGAATACATGAATACAGGAAGCAAGTAACTGAGAATACAGGAAAAGCAGGAACTGAGAATACAGGAAAAGCAGGAACTGAAAATACAGGAAAAGCAGGAACTGAGAATACAGGAAAAGCAGGAACTGAGAATACAGGAAAAGCAAGAAAATAAATCAACTAGTAACTGAGAATACAGGAAAAACAAGAAAATAAATCAACTAGTAACTGAGAATACAGGAAAAACAAGAAAATAAATCAACTAGTAACTGAGAATACAGGAAAAACAAGAAAATAAATCAACTAGTAACTGAGAATACAGGAAAAGTAAGAAAAGTCGCAAGTAACTGAGAATACAGAAAAAGCAAGAAAAGCAGCAAGTAACTGAGAATACATGAATTGAAAATACAGAGAATACAAAGAAAGCAGAAAACTGAGTAAACTTAGGAAGAGATAATATAGAAAAAGAAGAGATAAATAATTAGGTATGTACAAAAAGAATGCAAAAAAACTTCAAGTATGTATAATAAAAGAGAATGCAGAAAGCTTCAAGTATGTACGGTAACAAATATGGTACCATAACATAGCAAAAACCCTTCCAGTATAACATAGCACAAAACTTCAAGTATGTACGGTAACAAATATGGTACCATAACATAGCAAAAACTCTTCCAGTATAACATAGCACAAAACTTCAAGTATGTACGGTAACAAATATGGTATCATAGCATAACAAAAAACTTCAAGTATGTACGGTAACAAATATGGTACTATAACCTAGCAAAAAAACTTCAAGTATGTACCGTAACAAATATGGTACTATAACCTAGCAAAAAAACTTCAAATATATATAAACTTCGTATGTACCGTGTAGAAAACTTCAGCTATGTATAAACAATAGATGCGTGCCTATAGTATATATAGTTTTACTAGATAACATATATATTTCTATTATTTGTTTTTTTTATCATAAATAGTCATTTACTATATATATTATATATAGGCCTACTCCATAACCCAAAATTTTCTACTCAACAAATAAAAAAAAATAAAAACAAACATTTTCTAAATCACATAGGCTTAACTTTTCAAAATAAAAAACAAAAAACAAACATTTTCTAAATCAGATGGGCTTTTAACTTTTCAAAATAAAAAATAAAAATAGTTGTCAAACAATTTTGACTAAACTTTACTAGTCAAATATGTGTGAGATCAATAGTCGGTAACTTACGCCTCCGCCTCTTTTCTATTCAAGAGAAAATCTTCATAGCTATCGAATTTCAGTATTATTTAC

mRNA sequence

CATCAATGGCGGAGCGGGATCCGGAACTCGTTTATGTCATTGACGAACTCGACGATCAGTCATTCTTCTCGCTTTGCTTTGTTCCTTCAGCGTCCATCAGACCTTGGCCTCACAATAACACCGAGAGGTTCCAAATAAGGCCATCGCAGTTATTCACTGTTTTCCTAGGGTTTACGAAGGATCCGTATCATTATGTTAGAAAAGCTGTTACAGATTGCAGGTTTCTATTGCGTGCTATTGAGCTTCTAAACGACGTGGAACATTTTGTTAGATCATCTGCGATACGCATTATAAGACACTCCTACAAAGTGACTCTTCCGATATCTGTATTGGTAATATCATCTTTGTTCCATGACGAGAGATATGAGCATGAAGACGCCTGCAAGATACATGTGCAGCAGCTCAAAGATGGTGATGCCATAGAATCTATCAAGACTATGGTGCAAGACTTTGAGATTTTGCAAGGAAGCATTGGGAGTATTCACGTATCAAACGGACAGATACAGTGGTTCCTTAGCTTTTACAATGCAGTATCTCAAGATAAAGAAGCTGGCTGCAAAGGTATGGAATTTGATGTCTTCAAAACATTAGTCCTCGTAGAATTGAAGAATGGGAACTCTTATTGGGAAAGCTAGCATGGGGAGATATAGGGGTACATTTCGATCAACTTTTGTATCTGAAGTTCAAATAGGATTGTCGAAGCTAGGCACCATTACTCCTAAATCTTCTTGCAATTCACTTGACTTGGGAAAACTGGTTAAATCTTTCACCCTTAACCATCTAGAAATTTCCGAAAAACTTGAGCCCGTCAAGGCAGAACTAGTGATTCCAGATAATAATGACTATGAAAACCCCCTCTATTTTGTTCCAGGACTACTACCCGTTGGTATTCCTTGCCAAATTATCCTACACAATGTTCCAAGTGAGAGGAAGTTGTGGCTTAGAATCACTTTAGATAACATGACAAGCCAGTTTATCTTTTGGATTTCCTTCCCTTGGGAGGCTGTGACGAGGTTAGAGATTTTACATATATTGTTCCATTCTATAGAAACTCCAAAAGCTTCTCATTTTATAGCTAGGACTTGAATGTTGGTTTGAGAATGCTGAAGTTAATGAACGCCGTGGAGGTCCAAAACGTGATCCAGCACACATTTGTAAAGAGAAGGACGTATATCTTTCCATGATCAACGAAGAAATTGTTATGGAGATTCGAAGAAAATCAGCAATATCAAGTGTAAGGCATCCATCTTATCCATCTTATATATAGTTCAAATGCTTACTGCTCCTGGAGATACCTTGGACATCCAAAGCTCTGCGTATTAATCATTCTTTTAAAGCGTTGACATGAGAGTGCATAACCTTGGCAATAACTGATGCAATAAAGGCAATATGTTCCCAGGAAAGCACAAATGGAAAGAAACTGAATATAGGAAAAGCAGTAACTGAGAATACAGGCAGAGCAAAGTAGAAACTCAGAATACAAGAAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGCAGAGCAAAGCAGAAACTGAGAATACAGGAAGAGCAAAGCAGAAACTGAGAATACAGAGAAAACAGAATACAAAAAGAAACTGAAGCAGAAACTAAGAATATAGAAAAAGCAAAAACTGAAAATATAGATATTGAGAATACGTAAATGAGAATACAGGAATACAGGAAAAGCAAGAACTGAGAATAAGCAGTAATTAAGAAAGCAAGAACCGAGAATACAGGAAAAGCAGGAACCGAGAATACAGGAAAAGCAGGAATCGAGAATACAGGAATACAGGAAAAGCAGTAACTAAGAATACAAGAATACAGGAAAAGCAGGAACCGAGAATACAGGAAAAGCAGTAACTAAGAATACGAGAATACAGGAAAAGCAGTAACTGAGAATACAGGAATACAGAAAAAGCAGTAACTGAGAATACAGGAATACAGAAAAAGCAGTAACTGAGAATACAGGAATACAGGAAAAGCAGTAACTAAGAATACAGGAAAAACAAGAACTGAGAATACATGAATACAGGAAGCAAGTAACTGAGAATACAGGAAAAGCAGGAACTGAGAATACATGAATACAGGAAGCAAGTAACTGAGAATACAGGAAAAGCGAGAATACAGGAAAAGCAGGAACTGAGAATACAGGAAAAGCAGTAACTAAGAATACAGGAAAAACAAGAACTGAGAATACATGAATACAGGAAGCAAGTAACTGAGAATACAGGAAAAGCAGGAACTGAGAATACAGGAAAAGCAGGAACTGAAAATACAGGAAAAGCAGGAACTGAGAATACAGGAAAAGCAGGAACTGAGAATACAGGAAAAGCAAGAAAATAAATCAACTAGTAACTGAGAATACAGGAAAAACAAGAAAATAAATCAACTAGTAACTGAGAATACAGGAAAAACAAGAAAATAAATCAACTAGTAACTGAGAATACAGGAAAAACAAGAAAATAAATCAACTAGTAACTGAGAATACAGGAAAAGTAAGAAAAGTCGCAAGTAACTGAGAATACAGAAAAAGCAAGAAAAGCAGCAAGTAACTGAGAATACATGAATTGAAAATACAGAGAATACAAAGAAAGCAGAAAACTGAGTAAACTTAGGAAGAGATAATATAGAAAAAGAAGAGATAAATAATTAGGTATGTACAAAAAGAATGCAAAAAAACTTCAAGTATGTATAATAAAAGAGAATGCAGAAAGCTTCAAGTATGTACGGTAACAAATATGGTACCATAACATAGCAAAAACCCTTCCAGTATAACATAGCACAAAACTTCAAGTATGTACGGTAACAAATATGGTACTATAACCTAGCAAAAAAACTTCAAGTATGTACCGTAACAAATATGGTACTATAACCTAGCAAAAAAACTTCAAATATATATAAACTTCGTATGTACCGTGTAGAAAACTTCAGCTATGTATAAACAATAGATGCGTGCCTATAGTATATATAGTTTTACTAGATAACATATATATTTCTATTATTTGTTTTTTTTATCATAAATAGTCATTTACTATATATATTATATATAGGCCTACTCCATAACCCAAAATTTTCTACTCAACAAATAAAAAAAAATAAAAACAAACATTTTCTAAATCACATAGGCTTAACTTTTCAAAATAAAAAACAAAAAACAAACATTTTCTAAATCAGATGGGCTTTTAACTTTTCAAAATAAAAAATAAAAATAGTTGTCAAACAATTTTGACTAAACTTTACTAGTCAAATATGTGTGAGATCAATAGTCGGTAACTTACGCCTCCGCCTCTTTTCTATTCAAGAGAAAATCTTCATAGCTATCGAATTTCAGTATTATTTAC

Coding sequence (CDS)

ATGGCGGAGCGGGATCCGGAACTCGTTTATGTCATTGACGAACTCGACGATCAGTCATTCTTCTCGCTTTGCTTTGTTCCTTCAGCGTCCATCAGACCTTGGCCTCACAATAACACCGAGAGGTTCCAAATAAGGCCATCGCAGTTATTCACTGTTTTCCTAGGGTTTACGAAGGATCCGTATCATTATGTTAGAAAAGCTGTTACAGATTGCAGGTTTCTATTGCGTGCTATTGAGCTTCTAAACGACGTGGAACATTTTGTTAGATCATCTGCGATACGCATTATAAGACACTCCTACAAAGTGACTCTTCCGATATCTGTATTGGTAATATCATCTTTGTTCCATGACGAGAGATATGAGCATGAAGACGCCTGCAAGATACATGTGCAGCAGCTCAAAGATGGTGATGCCATAGAATCTATCAAGACTATGGTGCAAGACTTTGAGATTTTGCAAGGAAGCATTGGGAGTATTCACGTATCAAACGGACAGATACAGTGGTTCCTTAGCTTTTACAATGCAGTATCTCAAGATAAAGAAGCTGGCTGCAAAGGTATGGAATTTGATGTCTTCAAAACATTAGTCCTCGTAGAATTGAAGAATGGGAACTCTTATTGGGAAAGCTAG

Protein sequence

MAERDPELVYVIDELDDQSFFSLCFVPSASIRPWPHNNTERFQIRPSQLFTVFLGFTKDPYHYVRKAVTDCRFLLRAIELLNDVEHFVRSSAIRIIRHSYKVTLPISVLVISSLFHDERYEHEDACKIHVQQLKDGDAIESIKTMVQDFEILQGSIGSIHVSNGQIQWFLSFYNAVSQDKEAGCKGMEFDVFKTLVLVELKNGNSYWES
Homology
[Close]
BLAST of Cp4.1LG08g12270 vs. ExPASy Swiss-Prot
Match: Q8VZA0 (Protein SIEL OS=Arabidopsis thaliana OX=3702 GN=SIEL PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.9e-15
Identity = 44/113 (38.94%), Postives = 61/113 (53.98%), Query Frame = 0 

Query: 1   MAERDPELVYVIDELDDQSFFSLCFVPSASIRPWPHNNTERFQIRPSQLFTVFLGFTKDP 60
           ++ER P +   + ++DD+ F S+C     S R W   N +RF +  S LFT+FLGF+KDP
Sbjct: 112 LSERTPSIAAALSKIDDEVFASICLGAPISSRLWLLRNADRFNVPSSVLFTLFLGFSKDP 171

Query: 61  YHYVRKAVTD-----CR------------FLLRAIELLNDVEHFVRSSAIRII 97
           Y Y+RK   D     C                RA+ELL+D E  VRSSA+R +
Sbjct: 172 YPYIRKVALDGLINICNAGDFNHTHAVEGCYTRAVELLSDAEDSVRSSAVRAV 224

[Close]
BLAST of Cp4.1LG08g12270 vs. NCBI nr
Match: KAG6596326.1 (Protein SIEL, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355 bits (910), Expect = 9.61e-123
Identity = 178/209 (85.17%), Postives = 180/209 (86.12%), Query Frame = 0 

Query: 1   MAERDPELVYVIDELDDQSFFSLCFVPSASIRPWPHNNTERFQIRPSQLFTVFLGFTKDP 60
           MAERDPELVYVIDELDDQSFFSLCFVPSASIR W HNNTERFQIRPSQLFTVFLGFTKDP
Sbjct: 1   MAERDPELVYVIDELDDQSFFSLCFVPSASIRTWLHNNTERFQIRPSQLFTVFLGFTKDP 60

Query: 61  YHYVRKAVTDCRFLLRAIELLNDVEHFVRSSAIRIIRHSYKVTLPISVLVISSLFHDERY 120
           YHYVRKAVTDC                           SYKVTLPISVLVISSLFHDERY
Sbjct: 61  YHYVRKAVTDC---------------------------SYKVTLPISVLVISSLFHDERY 120

Query: 121 EHEDACKIHVQQLKDGDAIESIKTMVQDFEILQGSIGSIHVSNGQIQWFLSFYNAVSQDK 180
           EHEDACKIHVQQLKDGDA+ESIKTMVQDFEILQGSIGSIHVSNGQIQWFLSFYNAVSQDK
Sbjct: 121 EHEDACKIHVQQLKDGDALESIKTMVQDFEILQGSIGSIHVSNGQIQWFLSFYNAVSQDK 180

Query: 181 EAGCKGMEFDVFKTLVLVELKNGNSYWES 209
           EAGCKGM+FDVFKTLVLVELKNGNSYWES
Sbjct: 181 EAGCKGMKFDVFKTLVLVELKNGNSYWES 182

[Close]
BLAST of Cp4.1LG08g12270 vs. NCBI nr
Match: KAG6580449.1 (Protein SIEL, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 123 bits (309), Expect = 5.07e-32
Identity = 69/114 (60.53%), Postives = 75/114 (65.79%), Query Frame = 0 

Query: 1   MAERDPELVYVIDELDDQSFFSLCFVPSASIRPWPHNNTERFQIRPSQLFTVFLGFTKDP 60
           MAERD ELV  I+ELDD+SF SLCF PS SIR W   N ERFQIRPS L TVFLGFTKDP
Sbjct: 1   MAERDSELVSAINELDDRSFLSLCFGPSVSIRIWLLKNAERFQIRPSLLLTVFLGFTKDP 60

Query: 61  YHYVRKAVTD------------------CRFLLRAIELLNDVEHFVRSSAIRII 96
           Y YVRKA  D                  C F  RAIELLNDVE  VRS+A+R++
Sbjct: 61  YPYVRKAALDGLAGLGNTVVEDGSMIECCYF--RAIELLNDVEDCVRSAAVRVV 112

[Close]
BLAST of Cp4.1LG08g12270 vs. NCBI nr
Match: XP_008463333.1 (PREDICTED: protein SIEL isoform X2 [Cucumis melo])

HSP 1 Score: 124 bits (310), Expect = 1.26e-28
Identity = 65/112 (58.04%), Postives = 77/112 (68.75%), Query Frame = 0 

Query: 1   MAERDPELVYVIDELDDQSFFSLCFVPSASIRPWPHNNTERFQIRPSQLFTVFLGFTKDP 60
           MAE+D EL+  ++E+D+QSF SLCF PS SIR W  NN ERFQ+RPS LFTVFLGFTKDP
Sbjct: 1   MAEQDLELISTLNEIDEQSFLSLCFGPSVSIRTWLLNNAERFQLRPSLLFTVFLGFTKDP 60

Query: 61  YHYVRKAVTDCRFLL----------------RAIELLNDVEHFVRSSAIRII 96
           Y YVRKA  D    L                RAIELLND+E +VRS+AIR++
Sbjct: 61  YPYVRKAALDGLSSLGNTVFEDGGMIEGCYCRAIELLNDMEDYVRSAAIRVV 112

[Close]
BLAST of Cp4.1LG08g12270 vs. NCBI nr
Match: XP_022157325.1 (protein SIEL isoform X1 [Momordica charantia])

HSP 1 Score: 124 bits (310), Expect = 1.28e-28
Identity = 69/114 (60.53%), Postives = 75/114 (65.79%), Query Frame = 0 

Query: 1   MAERDPELVYVIDELDDQSFFSLCFVPSASIRPWPHNNTERFQIRPSQLFTVFLGFTKDP 60
           MAERD ELV  IDELDD SF SLCF PS SIR W  NN ERFQIRPS LFTVFLGFTKDP
Sbjct: 1   MAERDRELVSAIDELDDGSFLSLCFGPSVSIRTWLLNNAERFQIRPSLLFTVFLGFTKDP 60

Query: 61  YHYVRKAVTD------------------CRFLLRAIELLNDVEHFVRSSAIRII 96
           Y YVR A  D                  C +  RAIELLND+E  VRS+A+R++
Sbjct: 61  YPYVRIAALDGLVGLGNNVFEDGGMIEGCYY--RAIELLNDMEDCVRSAAVRVV 112

[Close]
BLAST of Cp4.1LG08g12270 vs. NCBI nr
Match: XP_008463329.1 (PREDICTED: protein SIEL isoform X1 [Cucumis melo] >XP_016903038.1 PREDICTED: protein SIEL isoform X1 [Cucumis melo] >KAA0051891.1 protein SIEL isoform X1 [Cucumis melo var. makuwa] >TYK17144.1 protein SIEL isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (310), Expect = 1.28e-28
Identity = 65/112 (58.04%), Postives = 77/112 (68.75%), Query Frame = 0 

Query: 1   MAERDPELVYVIDELDDQSFFSLCFVPSASIRPWPHNNTERFQIRPSQLFTVFLGFTKDP 60
           MAE+D EL+  ++E+D+QSF SLCF PS SIR W  NN ERFQ+RPS LFTVFLGFTKDP
Sbjct: 1   MAEQDLELISTLNEIDEQSFLSLCFGPSVSIRTWLLNNAERFQLRPSLLFTVFLGFTKDP 60

Query: 61  YHYVRKAVTDCRFLL----------------RAIELLNDVEHFVRSSAIRII 96
           Y YVRKA  D    L                RAIELLND+E +VRS+AIR++
Sbjct: 61  YPYVRKAALDGLSSLGNTVFEDGGMIEGCYCRAIELLNDMEDYVRSAAIRVV 112

[Close]
BLAST of Cp4.1LG08g12270 vs. ExPASy TrEMBL
Match: A0A1S3CIY4 (protein SIEL isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501508 PE=4 SV=1)

HSP 1 Score: 124 bits (310), Expect = 6.10e-29
Identity = 65/112 (58.04%), Postives = 77/112 (68.75%), Query Frame = 0 

Query: 1   MAERDPELVYVIDELDDQSFFSLCFVPSASIRPWPHNNTERFQIRPSQLFTVFLGFTKDP 60
           MAE+D EL+  ++E+D+QSF SLCF PS SIR W  NN ERFQ+RPS LFTVFLGFTKDP
Sbjct: 1   MAEQDLELISTLNEIDEQSFLSLCFGPSVSIRTWLLNNAERFQLRPSLLFTVFLGFTKDP 60

Query: 61  YHYVRKAVTDCRFLL----------------RAIELLNDVEHFVRSSAIRII 96
           Y YVRKA  D    L                RAIELLND+E +VRS+AIR++
Sbjct: 61  YPYVRKAALDGLSSLGNTVFEDGGMIEGCYCRAIELLNDMEDYVRSAAIRVV 112

[Close]
BLAST of Cp4.1LG08g12270 vs. ExPASy TrEMBL
Match: A0A6J1DSR4 (protein SIEL isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024055 PE=4 SV=1)

HSP 1 Score: 124 bits (310), Expect = 6.19e-29
Identity = 69/114 (60.53%), Postives = 75/114 (65.79%), Query Frame = 0 

Query: 1   MAERDPELVYVIDELDDQSFFSLCFVPSASIRPWPHNNTERFQIRPSQLFTVFLGFTKDP 60
           MAERD ELV  IDELDD SF SLCF PS SIR W  NN ERFQIRPS LFTVFLGFTKDP
Sbjct: 1   MAERDRELVSAIDELDDGSFLSLCFGPSVSIRTWLLNNAERFQIRPSLLFTVFLGFTKDP 60

Query: 61  YHYVRKAVTD------------------CRFLLRAIELLNDVEHFVRSSAIRII 96
           Y YVR A  D                  C +  RAIELLND+E  VRS+A+R++
Sbjct: 61  YPYVRIAALDGLVGLGNNVFEDGGMIEGCYY--RAIELLNDMEDCVRSAAVRVV 112

[Close]
BLAST of Cp4.1LG08g12270 vs. ExPASy TrEMBL
Match: A0A1S3CKJ8 (protein SIEL isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501508 PE=4 SV=1)

HSP 1 Score: 124 bits (310), Expect = 6.19e-29
Identity = 65/112 (58.04%), Postives = 77/112 (68.75%), Query Frame = 0 

Query: 1   MAERDPELVYVIDELDDQSFFSLCFVPSASIRPWPHNNTERFQIRPSQLFTVFLGFTKDP 60
           MAE+D EL+  ++E+D+QSF SLCF PS SIR W  NN ERFQ+RPS LFTVFLGFTKDP
Sbjct: 1   MAEQDLELISTLNEIDEQSFLSLCFGPSVSIRTWLLNNAERFQLRPSLLFTVFLGFTKDP 60

Query: 61  YHYVRKAVTDCRFLL----------------RAIELLNDVEHFVRSSAIRII 96
           Y YVRKA  D    L                RAIELLND+E +VRS+AIR++
Sbjct: 61  YPYVRKAALDGLSSLGNTVFEDGGMIEGCYCRAIELLNDMEDYVRSAAIRVV 112

[Close]
BLAST of Cp4.1LG08g12270 vs. ExPASy TrEMBL
Match: A0A5A7UEC0 (Protein SIEL isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2273G00030 PE=4 SV=1)

HSP 1 Score: 124 bits (310), Expect = 6.19e-29
Identity = 65/112 (58.04%), Postives = 77/112 (68.75%), Query Frame = 0 

Query: 1   MAERDPELVYVIDELDDQSFFSLCFVPSASIRPWPHNNTERFQIRPSQLFTVFLGFTKDP 60
           MAE+D EL+  ++E+D+QSF SLCF PS SIR W  NN ERFQ+RPS LFTVFLGFTKDP
Sbjct: 1   MAEQDLELISTLNEIDEQSFLSLCFGPSVSIRTWLLNNAERFQLRPSLLFTVFLGFTKDP 60

Query: 61  YHYVRKAVTDCRFLL----------------RAIELLNDVEHFVRSSAIRII 96
           Y YVRKA  D    L                RAIELLND+E +VRS+AIR++
Sbjct: 61  YPYVRKAALDGLSSLGNTVFEDGGMIEGCYCRAIELLNDMEDYVRSAAIRVV 112

[Close]
BLAST of Cp4.1LG08g12270 vs. ExPASy TrEMBL
Match: A0A6J1F7A9 (protein SIEL OS=Cucurbita moschata OX=3662 GN=LOC111441512 PE=4 SV=1)

HSP 1 Score: 123 bits (309), Expect = 8.43e-29
Identity = 69/114 (60.53%), Postives = 75/114 (65.79%), Query Frame = 0 

Query: 1   MAERDPELVYVIDELDDQSFFSLCFVPSASIRPWPHNNTERFQIRPSQLFTVFLGFTKDP 60
           MAERD ELV  I+ELDD+SF SLCF PS SIR W   N ERFQIRPS L TVFLGFTKDP
Sbjct: 1   MAERDSELVSAINELDDRSFLSLCFGPSVSIRIWLLKNAERFQIRPSLLLTVFLGFTKDP 60

Query: 61  YHYVRKAVTD------------------CRFLLRAIELLNDVEHFVRSSAIRII 96
           Y YVRKA  D                  C F  RAIELLNDVE  VRS+A+R++
Sbjct: 61  YPYVRKAALDGLAGLGNTVVEDGSMIECCYF--RAIELLNDVEDCVRSAAVRVV 112

[Close]
BLAST of Cp4.1LG08g12270 vs. TAIR 10
Match: AT3G08800.1 (ARM repeat superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 2.7e-16
Identity = 44/113 (38.94%), Postives = 61/113 (53.98%), Query Frame = 0 

Query: 1   MAERDPELVYVIDELDDQSFFSLCFVPSASIRPWPHNNTERFQIRPSQLFTVFLGFTKDP 60
           ++ER P +   + ++DD+ F S+C     S R W   N +RF +  S LFT+FLGF+KDP
Sbjct: 112 LSERTPSIAAALSKIDDEVFASICLGAPISSRLWLLRNADRFNVPSSVLFTLFLGFSKDP 171

Query: 61  YHYVRKAVTD-----CR------------FLLRAIELLNDVEHFVRSSAIRII 97
           Y Y+RK   D     C                RA+ELL+D E  VRSSA+R +
Sbjct: 172 YPYIRKVALDGLINICNAGDFNHTHAVEGCYTRAVELLSDAEDSVRSSAVRAV 224

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g12270 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VZA03.9e-1538.94Protein SIEL OS=Arabidopsis thaliana OX=3702 GN=SIEL PE=1 SV=1[more]
BLAST of Cp4.1LG08g12270 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6596326.19.61e-12385.17Protein SIEL, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG6580449.15.07e-3260.53Protein SIEL, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_008463333.11.26e-2858.04PREDICTED: protein SIEL isoform X2 [Cucumis melo][more]
XP_022157325.11.28e-2860.53protein SIEL isoform X1 [Momordica charantia][more]
XP_008463329.11.28e-2858.04PREDICTED: protein SIEL isoform X1 [Cucumis melo] >XP_016903038.1 PREDICTED: pro... [more]
BLAST of Cp4.1LG08g12270 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CIY46.10e-2958.04protein SIEL isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501508 PE=4 SV=1[more]
A0A6J1DSR46.19e-2960.53protein SIEL isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024055 PE=4 SV=1[more]
A0A1S3CKJ86.19e-2958.04protein SIEL isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501508 PE=4 SV=1[more]
A0A5A7UEC06.19e-2958.04Protein SIEL isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1F7A98.43e-2960.53protein SIEL OS=Cucurbita moschata OX=3662 GN=LOC111441512 PE=4 SV=1[more]
BLAST of Cp4.1LG08g12270 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G08800.12.7e-1638.94ARM repeat superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g12270.1Cp4.1LG08g12270.1mRNA