Cp4.1LG08g11640 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g11640
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein FAR-RED ELONGATED HYPOCOTYL 1-like
Location	Cp4.1LG08: 8672956 .. 8676953 (-)
RNA-Seq Expression	Cp4.1LG08g11640
Synteny	Cp4.1LG08g11640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGGTTGGTTGGGGGAATGGAGGAAGCAACTCCCTCGGGCCACCCACGTGAACTCGATATGGACGTGTCTATATCTCTCAGTGCCGCGCACCAATTACCCCCAACTCTCTCCCCCTTTTCTGGGTCTGATTTGATTTGAAATGATCGCAAAGCACTCTCCTGCCAACTGACCCATAATAATATCAACCAATCACACAAATCTTCGACCCTCTAAACACCCACAACTCGCCTCATCTTCTTCCACTGAAATCGGATTTCATTTCTGGGCTTCTGGGTTTCTGGGTTTCTGGGTTTGCGTCTCTGAATCTGATCGATTTTCTTGTCTTCCGGATTGAGATGGAGGAGAAGGAACATAACCCAACTGAGATCAACAGGTTTGCCATCTGGGTTTTTAAAGATTCTTGCTCTAACCGACTCTTTTATCAGTTTTCGAATCTGTTTCTTGTACTGTTTAATGTCTCTTTAATGTCGGTCTAGTTCTAAAACGGTGGATGTGGATCGAGATGGGGTTTTTGATTCATTTCTGTTGCTTAATCTTTTTAGTGTCTGATCATTGGATTTCACTTATTCCCCGTTCTAGAACTTCCCTCAACCCTATATTCATCAAGTAATTTTGTGAGAGATTGAAGCATTTTCTCTTGTAGTTCCTGTCTTGCATCTTTTGTCCTGTTTCTTGTCTGATGAATTATGTTGTTTTTTTGTTAAAACTTTTGCAGTTTCTATGCGATTTCCAAGAAAAGAAAACTGCCAGCTGAACACTTGGGCTTGCCTTCACCAAAACATAAACACAGCAATGAAGCCTCCCCTTCCAAATCTGTCTTTCTTCATGCTGGCCTACCCGAAACAGAGCTTATGACTGTGCAATTCTCAAAGGGTAATCCAAATGTAATGTGTATCGACAAGGGGTCGACGCCTGAATCGGTAAAAGATAGCAATAGCTTCAGCGACGAGTCCGATTCTGTGACGTCGGTGTTCTGTGGAGTAAAATTGGAACTGAACCAGGCTTTATCTTGCACACATGATAGTTCTGAAAGCAACCATTTCTCTGTTGGAAGTTCCACAGCAATGGAATCGAGCTCGACCGAACAGGAAGTAGCGTTTGCGAGAGGGGAGAACGAAATGGAAGCAATTCACAAAATTCAGAAGCATATGCTAGAATTGGATAGCCATGAAGAACATGTAAATGATGATCTTGAGCAATGTACAGAGAAGGAACTTGAGGATCTTTTCCATTCGAACCAGTTGAACACGAATACGTATGTTCTTTCGTCGGGAAGATGGACAGTAAACCACGGTAATAAACACATGATCCATAAGAATTTTGATCGGTTGAATTGAATTGGTTTTTACCATGTGCATTCATATTTATCCATTTACTAAATCACACTCATTCTCTTGATGCAGAGGCTCAATCAAGAGCTAGAACCGCAACGATCGATCAAGAATTCGAGCAGTTCTTCTCCATGTTAATGCTGTAACTCCGAATTGTCCCTCTTTTAGCTAGCTAAAGAGTTGCAGTGGCTGAATCAAACTTTACAGAAACAACAAAAAAGGCAGGTTTTATTTGTTCTTTAGAAAACAGAGAAGGAAACAGAGTAAAGGAAGCCCACTCTGTTTCCTTAAAACAGAGCACACACGACAAAGAGGAATAAAGAAAGGAATCTGGGGATGTTTTAAGTTTACAAAGATTGAAGAAAGAACAAAAGGAAAACCCAGAAATCAACACTTTGGAAGATCGGCTGGCGGCGGCCGTAGTTTCTGGTCGGATTTTGGGCCGTCGAGGACAATCCATGCCATTCTCAGCCCCCAGCTCGTGTGGACGTCAAAATGGCAGTGCATGAACCAAACCCCTGTTAACCAAAATTTGAATGTCATATAAAAATGGAACACATTTTGAATGGTGAAAGAGAAATTGTTATCTCACCTGGGTTATCGGCGAAGAAACGGAAGGCCAACCAGCCGCCGGCGGGAACGCCGGCAGTGTTCCTCTCAACCGGGTCAACCAGATTGAAATTAGCTGGATCCTTATTCATGTCGAAATTCCCAAAACCTTCTCCGACAATAAAGAAATTATATCCATGAAGATGGAGTGGATGACTCTCCGCCCCCAAAATACTCGTCCCCTGCAAAACGACTTCCACGCTCGCATTAAACGGCAGCACTACCACACTCGTACTGTTACTCACAAATGTATTATTGAGCGGCACTCCGGTGTAGTTGAAGGGAAAAACCGGCTTGGCCGGAAAATTAGTTCGGTAAACCCCATTAGTCCGGCGGGAGAAATACGCCTGCAGAATCGCCGTCTTCGGCAGAGCAAAAGAGACATTATTAACAGAGGCAGCGAATTTCGTACCGTTGGGACCTTGACACGTGACGTTTTTCGGACATGGCGCAGTTCCAAGTCCGACAGTGAAGAAAAATTTCCTGTCGACGGTTTGTGGGACATTTGCAGGGAATTTAGCATTGGCAAGAGACCGGAATTTTCTCGAGAAATTGGCGACGAAATTCGTGTCGTTAATTGCCGGGAGATTGGGAAGTTGAGTGGCCGGAGTTCGGGTGGTGGGTGAGTCGCCGTACTGGAGGATTCCGACGGTGGTGGAATTGTCGAAAGTACCCTGGCCAGTGAAGTACGGTCGAGCCGCCATGAGGAAACTTCCGTTGGTGAAATTGGGATTTGTTTTAAGAAGAACATTGGAGGTTTGGCCGGGAGTGAGCAATATCACGTCGGTTTGAAAGGGCTTGACGTAAACGGCGTCGGCGTCGACGACGGTCAGAGAATGGCCGGCAATAGTGAAGAAAAGCTCGTCGTTGAGTGCAGCGTTGATCAATCGGAGTAGGTACGTTTTACCAGGCTTCACTTTTAGCTTAAATGTATCTGAAAATCAAAATTTAATCATTTTTAGTGTTAATTAAACAAAATTAATAGAGGGATTAAAGTGATTACCATTAGAAGAGGAGCAATTATAAAGAGGACCAGGGAGTCCATTAATGGTGTACGCATCGGAAACATTCGGCGCTGCTCCGGTCTGCAGCGCCTGCTGAATCACACTCTCCGGCCTCACATTGAACCACTCACCCAAAATGATTGGGACTTCTCTGTGGGGCTTCTCGAACGGATATGACTCATTCCGGCGAGGGAGGATGATAATGGCGCCGTGAATTGTGGCTCTCAGCCACGAGATATGGCCGTGCCAAAGCAGAGTCCCTCTTTGGCCGTCGAGTGAAAAATTATAGGTGTAAGCTTGGCCGGTCTGGATCGGACATTGGGTCACATAAGCCGGTCCGTCGGCCCAACCGGTTCGGATCTGCCGGACGCCGTGCCAGTGGATGGTGACGTTCTCAGCCACGTGGTTGACGACCTTGATCAAGACTCTGTCGCCTTCTCTGGCCACCACTGGCGGCCCGGGGAGCTGCCGGTTGACGGTTAGAAGGTTCACCGTATGGCACAGCCTCGTTACGTTCTGGTACCCTATCTGTAAAACCCGCCGCCAGTCATTATTCCACGCTGTTCCGGTCACCTTTTTTTAATTTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGGCCATACATTGAAAGTGTAGTGTCTGGTTACCCCGAACGCAAGCTCCGGCAAGAAACACGACAGAAGTGAGAGAAAAACAGTCAGAGCCGCCATTGATGAAGGCTCTGAAGGGCGGAAGGCGGCCATGGAAATTCAGTAGCTGTGGAAGAAGATGAATAAATGGGGGTTAATAAATNTTTTTTTTAATTTTATAATTTGACACAGTTTAATTTGAACAACCATGATTATGCTTTATATTTCTTTAAAATTAAGGAATTTCTTTTTGAATTGTTTCATTTCATCACACTGTTCTTCTTTTTGTCCCTTGTTCTTTTGTAGTTATACATTCAAGTTTAAGTCAAGTTAATTATAGAATATATGTCATTTATATTTATACGTAATTATTTCTATATGTTCGTGTTAAAAAGAATATTACATGAAAT

mRNA sequence

TGGGGTTGGTTGGGGGAATGGAGGAAGCAACTCCCTCGGGCCACCCACGTGAACTCGATATGGACGTGTCTATATCTCTCAGTGCCGCGCACCAATTACCCCCAACTCTCTCCCCCTTTTCTGGGTCTGATTTGATTTGAAATGATCGCAAAGCACTCTCCTGCCAACTGACCCATAATAATATCAACCAATCACACAAATCTTCGACCCTCTAAACACCCACAACTCGCCTCATCTTCTTCCACTGAAATCGGATTTCATTTCTGGGCTTCTGGGTTTCTGGGTTTCTGGGTTTGCGTCTCTGAATCTGATCGATTTTCTTGTCTTCCGGATTGAGATGGAGGAGAAGGAACATAACCCAACTGAGATCAACAGTTTCTATGCGATTTCCAAGAAAAGAAAACTGCCAGCTGAACACTTGGGCTTGCCTTCACCAAAACATAAACACAGCAATGAAGCCTCCCCTTCCAAATCTGTCTTTCTTCATGCTGGCCTACCCGAAACAGAGCTTATGACTGTGCAATTCTCAAAGGGTAATCCAAATGTAATGTGTATCGACAAGGGGTCGACGCCTGAATCGGTAAAAGATAGCAATAGCTTCAGCGACGAGTCCGATTCTGTGACGTCGGTGTTCTGTGGAGTAAAATTGGAACTGAACCAGGCTTTATCTTGCACACATGATAGTTCTGAAAGCAACCATTTCTCTGTTGGAAGTTCCACAGCAATGGAATCGAGCTCGACCGAACAGGAAGTAGCGTTTGCGAGAGGGGAGAACGAAATGGAAGCAATTCACAAAATTCAGAAGCATATGCTAGAATTGGATAGCCATGAAGAACATGTAAATGATGATCTTGAGCAATGTACAGAGAAGGAACTTGAGGATCTTTTCCATTCGAACCAGTTGAACACGAATACGTATGTTCTTTCGTCGGGAAGATGGACAGTAAACCACGAGGCTCAATCAAGAGCTAGAACCGCAACGATCGATCAAGAATTCGAGCAGTTCTTCTCCATGTTAATGCTGTAACTCCGAATTGTCCCTCTTTTAGCTAGCTAAAGAGTTGCAGTGGCTGAATCAAACTTTACAGAAACAACAAAAAAGGCAGGTTTTATTTGTTCTTTAGAAAACAGAGAAGGAAACAGAGTAAAGGAAGCCCACTCTGTTTCCTTAAAACAGAGCACACACGACAAAGAGGAATAAAGAAAGGAATCTGGGGATGTTTTAAGTTTACAAAGATTGAAGAAAGAACAAAAGGAAAACCCAGAAATCAACACTTTGGAAGATCGGCTGGCGGCGGCCGTAGTTTCTGGTCGGATTTTGGGCCGTCGAGGACAATCCATGCCATTCTCAGCCCCCAGCTCGTGTGGACGTCAAAATGGCAGTGCATGAACCAAACCCCTGTTAACCAAAATTTGAATGTCATATAAAAATGGAACACATTTTGAATGGTGAAAGAGAAATTGTTATCTCACCTGGGTTATCGGCGAAGAAACGGAAGGCCAACCAGCCGCCGGCGGGAACGCCGGCAGTGTTCCTCTCAACCGGGTCAACCAGATTGAAATTAGCTGGATCCTTATTCATGTCGAAATTCCCAAAACCTTCTCCGACAATAAAGAAATTATATCCATGAAGATGGAGTGGATGACTCTCCGCCCCCAAAATACTCGTCCCCTGCAAAACGACTTCCACGCTCGCATTAAACGGCAGCACTACCACACTCGTACTGTTACTCACAAATGTATTATTGAGCGGCACTCCGGTGTAGTTGAAGGGAAAAACCGGCTTGGCCGGAAAATTAGTTCGGTAAACCCCATTAGTCCGGCGGGAGAAATACGCCTGCAGAATCGCCGTCTTCGGCAGAGCAAAAGAGACATTATTAACAGAGGCAGCGAATTTCGTACCGTTGGGACCTTGACACGTGACGTTTTTCGGACATGGCGCAGTTCCAAGTCCGACAGTGAAGAAAAATTTCCTGTCGACGGTTTGTGGGACATTTGCAGGGAATTTAGCATTGGCAAGAGACCGGAATTTTCTCGAGAAATTGGCGACGAAATTCGTGTCGTTAATTGCCGGGAGATTGGGAAGTTGAGTGGCCGGAGTTCGGGTGGTGGGTGAGTCGCCGTACTGGAGGATTCCGACGGTGGTGGAATTGTCGAAAGTACCCTGGCCAGTGAAGTACGGTCGAGCCGCCATGAGGAAACTTCCGTTGGTGAAATTGGGATTTGTTTTAAGAAGAACATTGGAGGTTTGGCCGGGAGTGAGCAATATCACGTCGGTTTGAAAGGGCTTGACGTAAACGGCGTCGGCGTCGACGACGGTCAGAGAATGGCCGGCAATAGTGAAGAAAAGCTCGTCGTTGAGTGCAGCGTTGATCAATCGGAGTAGGTACGTTTTACCAGGCTTCACTTTTAGCTTAAATGTATCTGAAAATCAAAATTTAATCATTTTTAGTGTTAATTAAACAAAATTAATAGAGGGATTAAAGTGATTACCATTAGAAGAGGAGCAATTATAAAGAGGACCAGGGAGTCCATTAATGGTGTACGCATCGGAAACATTCGGCGCTGCTCCGGTCTGCAGCGCCTGCTGAATCACACTCTCCGGCCTCACATTGAACCACTCACCCAAAATGATTGGGACTTCTCTGTGGGGCTTCTCGAACGGATATGACTCATTCCGGCGAGGGAGGATGATAATGGCGCCGTGAATTGTGGCTCTCAGCCACGAGATATGGCCGTGCCAAAGCAGAGTCCCTCTTTGGCCGTCGAGTGAAAAATTATAGGTGTAAGCTTGGCCGGTCTGGATCGGACATTGGGTCACATAAGCCGGTCCGTCGGCCCAACCGGTTCGGATCTGCCGGACGCCGTGCCAGTGGATGGTGACGTTCTCAGCCACGTGGTTGACGACCTTGATCAAGACTCTGTCGCCTTCTCTGGCCACCACTGGCGGCCCGGGGAGCTGCCGGTTGACGGTTAGAAGGTTCACCGTATGGCACAGCCTCGTTACGTTCTGGTACCCTATCTGTAAAACCCGCCGCCAGTCATTATTCCACGCTGTTCCGGTCACCTTTTTTTAATTTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGGCCATACATTGAAAGTGTAGTGTCTGGTTACCCCGAACGCAAGCTCCGGCAAGAAACACGACAGAAGTGAGAGAAAAACAGTCAGAGCCGCCATTGATGAAGGCTCTGAAGGGCGGAAGGCGGCCATGGAAATTCAGTAGCTGTGGAAGAAGATGAATAAATGGGGGTTAATAAATNTTTTTTTTAATTTTATAATTTGACACAGTTTAATTTGAACAACCATGATTATGCTTTATATTTCTTTAAAATTAAGGAATTTCTTTTTGAATTGTTTCATTTCATCACACTGTTCTTCTTTTTGTCCCTTGTTCTTTTGTAGTTATACATTCAAGTTTAAGTCAAGTTAATTATAGAATATATGTCATTTATATTTATACGTAATTATTTCTATATGTTCGTGTTAAAAAGAATATTACATGAAAT

Coding sequence (CDS)

ATGGAGGAGAAGGAACATAACCCAACTGAGATCAACAGTTTCTATGCGATTTCCAAGAAAAGAAAACTGCCAGCTGAACACTTGGGCTTGCCTTCACCAAAACATAAACACAGCAATGAAGCCTCCCCTTCCAAATCTGTCTTTCTTCATGCTGGCCTACCCGAAACAGAGCTTATGACTGTGCAATTCTCAAAGGGTAATCCAAATGTAATGTGTATCGACAAGGGGTCGACGCCTGAATCGGTAAAAGATAGCAATAGCTTCAGCGACGAGTCCGATTCTGTGACGTCGGTGTTCTGTGGAGTAAAATTGGAACTGAACCAGGCTTTATCTTGCACACATGATAGTTCTGAAAGCAACCATTTCTCTGTTGGAAGTTCCACAGCAATGGAATCGAGCTCGACCGAACAGGAAGTAGCGTTTGCGAGAGGGGAGAACGAAATGGAAGCAATTCACAAAATTCAGAAGCATATGCTAGAATTGGATAGCCATGAAGAACATGTAAATGATGATCTTGAGCAATGTACAGAGAAGGAACTTGAGGATCTTTTCCATTCGAACCAGTTGAACACGAATACGTATGTTCTTTCGTCGGGAAGATGGACAGTAAACCACGAGGCTCAATCAAGAGCTAGAACCGCAACGATCGATCAAGAATTCGAGCAGTTCTTCTCCATGTTAATGCTGTAA

Protein sequence

MEEKEHNPTEINSFYAISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHAGLPETELMTVQFSKGNPNVMCIDKGSTPESVKDSNSFSDESDSVTSVFCGVKLELNQALSCTHDSSESNHFSVGSSTAMESSSTEQEVAFARGENEMEAIHKIQKHMLELDSHEEHVNDDLEQCTEKELEDLFHSNQLNTNTYVLSSGRWTVNHEAQSRARTATIDQEFEQFFSMLML

Homology

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BLAST of Cp4.1LG08g11640 vs. ExPASy Swiss-Prot
Match: Q8S4Q6 (Protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Arabidopsis thaliana OX=3702 GN=FHY1 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.5e-07
Identity = 65/235 (27.66%), Postives = 99/235 (42.13%), Query Frame = 0


Query: 1   MEEKEHNPTEINSFYAI---SKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHAGLPETE 60
           ++     P+EINSF+ +   S K  L  E + + S K K   + S            E  
Sbjct: 6   VDNNNEKPSEINSFHHMIISSSKNVLKMEEVEV-SKKRKFQTDQS-----------DELS 65

Query: 61  LMTVQFSKGNPNVMCIDKGSTPESVKDSNSFSDESDSVTSVFCGVKLELNQALSCTHDSS 120
           L+ +       NV C +  +    +    S S   +S TS+ C   +E+ +         
Sbjct: 66  LLPLSKHTCFANVACSENTNGNSEIDTEYSMSSYVNSTTSMECNNDIEMKEE-------- 125

Query: 121 ESNHFSVGSSTAMESSSTEQEVAFARGENEMEAI-HKIQKHMLELDSHEEHVNDDLEQCT 180
                S GS    +  S E  + +  G   +E    K+ +++L LD  EE   +D + C+
Sbjct: 126 -----SSGSCGEDKMISFESHLDYIYGTQNLEDFSEKVIENILYLDEQEEE-EEDAKGCS 185

Query: 181 EKELEDLFHSNQLNTNTYVLSSGRWTVNHEAQS--RARTATIDQEFEQFFSMLML 230
                        N   +VLSSGRWTVN +  +    +  TIDQEFEQ+FS LML
Sbjct: 186 S------------NAAKFVLSSGRWTVNQDDSTLHETKKPTIDQEFEQYFSTLML 202

[Close]

BLAST of Cp4.1LG08g11640 vs. ExPASy Swiss-Prot
Match: A8MR65 (Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE OS=Arabidopsis thaliana OX=3702 GN=FHL PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.2e-04
Identity = 59/214 (27.57%), Postives = 99/214 (46.26%), Query Frame = 0


Query: 18  SKKRKLPAEHLG-LPSPKHKHSNEASPSKSVFLHAGLPETELMTVQFSKGNPNVMCIDKG 77
           SKKRKL AE    LP PKH      S  ++  +++  P + +   + S    N    D+ 
Sbjct: 31  SKKRKLHAEESDLLPLPKH----FCSEHQASLVNSSCPSSVIDYAECSYAMENTKTSDEA 90

Query: 78  STPESVKDSNSFSDESDSVTSVFCGVKLELNQALSCTHDSSESNHFSVGSSTAMESSSTE 137
           S+  S                 F G  L +           + + +S GSS++  ++++ 
Sbjct: 91  SSSAS-----------------FTGPSLYM----------FKDSIYSTGSSSSGYAATSS 150

Query: 138 QEVAFARGENEMEAIHKIQKHMLELDSHEEHVNDDLEQCTEKELEDLFHSNQLNTNTYVL 197
            E  F++ +      HK Q+   +  +H E +  D E   E +L+++ +       +Y+L
Sbjct: 151 IEQCFSKVD------HKTQEDTQDF-THMEFIYHDSEFAVE-DLQEVLNP----VESYIL 201

Query: 198 SSGRWTVNHEAQSRART-ATIDQEFEQFFSMLML 230
           SS RW+V+++    A T  TIDQEFEQ+FS LM+
Sbjct: 211 SSARWSVSNQDSKEATTKPTIDQEFEQYFSTLMM 201

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BLAST of Cp4.1LG08g11640 vs. NCBI nr
Match: XP_023540032.1 (protein FAR-RED ELONGATED HYPOCOTYL 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 442 bits (1138), Expect = 2.02e-156
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MEEKEHNPTEINSFYAISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHAGLPETELMT 60
           MEEKEHNPTEINSFYAISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHAGLPETELMT
Sbjct: 1   MEEKEHNPTEINSFYAISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHAGLPETELMT 60

Query: 61  VQFSKGNPNVMCIDKGSTPESVKDSNSFSDESDSVTSVFCGVKLELNQALSCTHDSSESN 120
           VQFSKGNPNVMCIDKGSTPESVKDSNSFSDESDSVTSVFCGVKLELNQALSCTHDSSESN
Sbjct: 61  VQFSKGNPNVMCIDKGSTPESVKDSNSFSDESDSVTSVFCGVKLELNQALSCTHDSSESN 120

Query: 121 HFSVGSSTAMESSSTEQEVAFARGENEMEAIHKIQKHMLELDSHEEHVNDDLEQCTEKEL 180
           HFSVGSSTAMESSSTEQEVAFARGENEMEAIHKIQKHMLELDSHEEHVNDDLEQCTEKEL
Sbjct: 121 HFSVGSSTAMESSSTEQEVAFARGENEMEAIHKIQKHMLELDSHEEHVNDDLEQCTEKEL 180

Query: 181 EDLFHSNQLNTNTYVLSSGRWTVNHEAQSRARTATIDQEFEQFFSMLML 229
           EDLFHSNQLNTNTYVLSSGRWTVNHEAQSRARTATIDQEFEQFFSMLML
Sbjct: 181 EDLFHSNQLNTNTYVLSSGRWTVNHEAQSRARTATIDQEFEQFFSMLML 229

[Close]

BLAST of Cp4.1LG08g11640 vs. NCBI nr
Match: KAG6596403.1 (Protein FAR-RED ELONGATED HYPOCOTYL 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027944.1 Protein FAR-RED ELONGATED HYPOCOTYL 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 409 bits (1051), Expect = 3.69e-143
Identity = 212/229 (92.58%), Postives = 217/229 (94.76%), Query Frame = 0


Query: 1   MEEKEHNPTEINSFYAISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHAGLPETELMT 60
           MEEKEHNPTEINSFY ISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLH GLPETELMT
Sbjct: 1   MEEKEHNPTEINSFYEISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHDGLPETELMT 60

Query: 61  VQFSKGNPNVMCIDKGSTPESVKDSNSFSDESDSVTSVFCGVKLELNQALSCTHDSSESN 120
           VQFSKGNPNVMCID+G TPESVKDSNSFSDESDS TSVFCG KLELNQALSCTHDSSES 
Sbjct: 61  VQFSKGNPNVMCIDEGLTPESVKDSNSFSDESDSATSVFCGAKLELNQALSCTHDSSEST 120

Query: 121 HFSVGSSTAMESSSTEQEVAFARGENEMEAIHKIQKHMLELDSHEEHVNDDLEQCTEKEL 180
           HF VGSSTAMESSSTEQEVAFARGEN+MEAIHKIQ+HMLELDSHEEHVNDDLEQCTE+EL
Sbjct: 121 HFCVGSSTAMESSSTEQEVAFARGENQMEAIHKIQEHMLELDSHEEHVNDDLEQCTEQEL 180

Query: 181 EDLFHSNQLNTNTYVLSSGRWTVNHEAQSRARTATIDQEFEQFFSMLML 229
           EDLF SN LN NTYVLSSGRWTVNHEAQSR RT TID+EFEQFFSMLML
Sbjct: 181 EDLFRSNGLNPNTYVLSSGRWTVNHEAQSRDRTPTIDREFEQFFSMLML 229

[Close]

BLAST of Cp4.1LG08g11640 vs. NCBI nr
Match: XP_022948410.1 (protein FAR-RED ELONGATED HYPOCOTYL 1-like [Cucurbita moschata] >XP_022948418.1 protein FAR-RED ELONGATED HYPOCOTYL 1-like [Cucurbita moschata])

HSP 1 Score: 400 bits (1027), Expect = 1.68e-139
Identity = 208/229 (90.83%), Postives = 215/229 (93.89%), Query Frame = 0


Query: 1   MEEKEHNPTEINSFYAISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHAGLPETELMT 60
           MEEKEHNPTEINSFY ISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLH GLPETELMT
Sbjct: 1   MEEKEHNPTEINSFYEISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHDGLPETELMT 60

Query: 61  VQFSKGNPNVMCIDKGSTPESVKDSNSFSDESDSVTSVFCGVKLELNQALSCTHDSSESN 120
           VQFSKGNPNV+CID+G TPESVKDSNSFSDES+S TSVFCG KLELNQALSCT DSSES 
Sbjct: 61  VQFSKGNPNVICIDEGLTPESVKDSNSFSDESNSATSVFCGAKLELNQALSCTRDSSEST 120

Query: 121 HFSVGSSTAMESSSTEQEVAFARGENEMEAIHKIQKHMLELDSHEEHVNDDLEQCTEKEL 180
           HF VGSSTAMESSSTEQEVAFARGEN+MEAIHKIQ+HML LDSHEEHVNDDLEQCTE+EL
Sbjct: 121 HFCVGSSTAMESSSTEQEVAFARGENQMEAIHKIQEHMLVLDSHEEHVNDDLEQCTEQEL 180

Query: 181 EDLFHSNQLNTNTYVLSSGRWTVNHEAQSRARTATIDQEFEQFFSMLML 229
           EDLF SN LN NTYVLSSGRWTVNHEAQSR RT TID+EFEQFFSMLML
Sbjct: 181 EDLFRSNGLNPNTYVLSSGRWTVNHEAQSRDRTPTIDREFEQFFSMLML 229

[Close]

BLAST of Cp4.1LG08g11640 vs. NCBI nr
Match: XP_022971458.1 (protein FAR-RED ELONGATED HYPOCOTYL 1-like isoform X1 [Cucurbita maxima] >XP_022971459.1 protein FAR-RED ELONGATED HYPOCOTYL 1-like isoform X2 [Cucurbita maxima] >XP_022971460.1 protein FAR-RED ELONGATED HYPOCOTYL 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 385 bits (989), Expect = 1.04e-133
Identity = 202/229 (88.21%), Postives = 209/229 (91.27%), Query Frame = 0


Query: 1   MEEKEHNPTEINSFYAISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHAGLPETELMT 60
           MEEKEHNPTEINSFY ISKKRKLPAEHLGLPSPKHKH NEA  SKSVFLH GLPETELMT
Sbjct: 1   MEEKEHNPTEINSFYEISKKRKLPAEHLGLPSPKHKHINEAFSSKSVFLHGGLPETELMT 60

Query: 61  VQFSKGNPNVMCIDKGSTPESVKDSNSFSDESDSVTSVFCGVKLELNQALSCTHDSSESN 120
           VQFSK N NVMCID+GSTPES+KDSNSFSD+SDS TSVFCG KLELNQALSCTHDSSES 
Sbjct: 61  VQFSKSNLNVMCIDEGSTPESLKDSNSFSDQSDSATSVFCGAKLELNQALSCTHDSSEST 120

Query: 121 HFSVGSSTAMESSSTEQEVAFARGENEMEAIHKIQKHMLELDSHEEHVNDDLEQCTEKEL 180
           HF VGSSTAMESSSTEQEVAFA  E++MEAIHKIQ+HMLELDSHEEHVNDD EQCTE+EL
Sbjct: 121 HFCVGSSTAMESSSTEQEVAFASVESKMEAIHKIQEHMLELDSHEEHVNDDREQCTEQEL 180

Query: 181 EDLFHSNQLNTNTYVLSSGRWTVNHEAQSRARTATIDQEFEQFFSMLML 229
           EDLF SN LN NTY LSSGRWTVNHEAQSRART TID EFEQFFSMLML
Sbjct: 181 EDLFRSNGLNPNTYALSSGRWTVNHEAQSRARTPTIDLEFEQFFSMLML 229

[Close]

BLAST of Cp4.1LG08g11640 vs. NCBI nr
Match: XP_004137783.2 (protein FAR-RED ELONGATED HYPOCOTYL 1 [Cucumis sativus] >KGN58861.1 hypothetical protein Csa_002447 [Cucumis sativus])

HSP 1 Score: 305 bits (782), Expect = 1.76e-100
Identity = 172/256 (67.19%), Postives = 191/256 (74.61%), Query Frame = 0


Query: 1   MEEKEHNPTEINSFYAISK----------KRKLPAEHLGLPSPKHKHSNEASPSKSVFLH 60
           MEEKE NP EINSFY ISK          KRKLPAEHLGLPSPKHKH +E   SKS FL+
Sbjct: 92  MEEKEQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEEFASKSAFLY 151

Query: 61  AGLPETELMTVQFSKGNPNVMCIDKGSTPESVKDSNSFSDESDSVTSVFCGVKLELNQAL 120
            GLPETE M VQF K N NV+C D+ S PESVKDSNS S+ESDS TSVF G K ELNQA+
Sbjct: 152 GGLPETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAI 211

Query: 121 SCTHD------------SSESNHFSVGSSTAMESSSTEQEVAFARGENEMEAIHKIQKHM 180
           +CTHD            SSES HFSV SSTAMESSSTEQE AF  GEN ME I K+Q+ +
Sbjct: 212 TCTHDTSTTRSMSFGGASSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQL 271

Query: 181 LELDSHE-----EHVNDDLEQCTEKELEDLFHSNQLNTNTYVLSSGRWTVNHEAQSRART 229
           LELDSHE     E+ NDD +QCT++ELE+LF+SN LN NTY+LSSGRW +NHEAQSRAR 
Sbjct: 272 LELDSHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINHEAQSRARA 331

[Close]

BLAST of Cp4.1LG08g11640 vs. ExPASy TrEMBL
Match: A0A6J1G9S1 (protein FAR-RED ELONGATED HYPOCOTYL 1-like OS=Cucurbita moschata OX=3662 GN=LOC111452097 PE=4 SV=1)

HSP 1 Score: 400 bits (1027), Expect = 8.13e-140
Identity = 208/229 (90.83%), Postives = 215/229 (93.89%), Query Frame = 0


Query: 1   MEEKEHNPTEINSFYAISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHAGLPETELMT 60
           MEEKEHNPTEINSFY ISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLH GLPETELMT
Sbjct: 1   MEEKEHNPTEINSFYEISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHDGLPETELMT 60

Query: 61  VQFSKGNPNVMCIDKGSTPESVKDSNSFSDESDSVTSVFCGVKLELNQALSCTHDSSESN 120
           VQFSKGNPNV+CID+G TPESVKDSNSFSDES+S TSVFCG KLELNQALSCT DSSES 
Sbjct: 61  VQFSKGNPNVICIDEGLTPESVKDSNSFSDESNSATSVFCGAKLELNQALSCTRDSSEST 120

Query: 121 HFSVGSSTAMESSSTEQEVAFARGENEMEAIHKIQKHMLELDSHEEHVNDDLEQCTEKEL 180
           HF VGSSTAMESSSTEQEVAFARGEN+MEAIHKIQ+HML LDSHEEHVNDDLEQCTE+EL
Sbjct: 121 HFCVGSSTAMESSSTEQEVAFARGENQMEAIHKIQEHMLVLDSHEEHVNDDLEQCTEQEL 180

Query: 181 EDLFHSNQLNTNTYVLSSGRWTVNHEAQSRARTATIDQEFEQFFSMLML 229
           EDLF SN LN NTYVLSSGRWTVNHEAQSR RT TID+EFEQFFSMLML
Sbjct: 181 EDLFRSNGLNPNTYVLSSGRWTVNHEAQSRDRTPTIDREFEQFFSMLML 229

[Close]

BLAST of Cp4.1LG08g11640 vs. ExPASy TrEMBL
Match: A0A6J1I6X2 (protein FAR-RED ELONGATED HYPOCOTYL 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470174 PE=4 SV=1)

HSP 1 Score: 385 bits (989), Expect = 5.02e-134
Identity = 202/229 (88.21%), Postives = 209/229 (91.27%), Query Frame = 0


Query: 1   MEEKEHNPTEINSFYAISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHAGLPETELMT 60
           MEEKEHNPTEINSFY ISKKRKLPAEHLGLPSPKHKH NEA  SKSVFLH GLPETELMT
Sbjct: 1   MEEKEHNPTEINSFYEISKKRKLPAEHLGLPSPKHKHINEAFSSKSVFLHGGLPETELMT 60

Query: 61  VQFSKGNPNVMCIDKGSTPESVKDSNSFSDESDSVTSVFCGVKLELNQALSCTHDSSESN 120
           VQFSK N NVMCID+GSTPES+KDSNSFSD+SDS TSVFCG KLELNQALSCTHDSSES 
Sbjct: 61  VQFSKSNLNVMCIDEGSTPESLKDSNSFSDQSDSATSVFCGAKLELNQALSCTHDSSEST 120

Query: 121 HFSVGSSTAMESSSTEQEVAFARGENEMEAIHKIQKHMLELDSHEEHVNDDLEQCTEKEL 180
           HF VGSSTAMESSSTEQEVAFA  E++MEAIHKIQ+HMLELDSHEEHVNDD EQCTE+EL
Sbjct: 121 HFCVGSSTAMESSSTEQEVAFASVESKMEAIHKIQEHMLELDSHEEHVNDDREQCTEQEL 180

Query: 181 EDLFHSNQLNTNTYVLSSGRWTVNHEAQSRARTATIDQEFEQFFSMLML 229
           EDLF SN LN NTY LSSGRWTVNHEAQSRART TID EFEQFFSMLML
Sbjct: 181 EDLFRSNGLNPNTYALSSGRWTVNHEAQSRARTPTIDLEFEQFFSMLML 229

[Close]

BLAST of Cp4.1LG08g11640 vs. ExPASy TrEMBL
Match: A0A0A0LFJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734140 PE=4 SV=1)

HSP 1 Score: 305 bits (782), Expect = 8.54e-101
Identity = 172/256 (67.19%), Postives = 191/256 (74.61%), Query Frame = 0


Query: 1   MEEKEHNPTEINSFYAISK----------KRKLPAEHLGLPSPKHKHSNEASPSKSVFLH 60
           MEEKE NP EINSFY ISK          KRKLPAEHLGLPSPKHKH +E   SKS FL+
Sbjct: 92  MEEKEQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEEFASKSAFLY 151

Query: 61  AGLPETELMTVQFSKGNPNVMCIDKGSTPESVKDSNSFSDESDSVTSVFCGVKLELNQAL 120
            GLPETE M VQF K N NV+C D+ S PESVKDSNS S+ESDS TSVF G K ELNQA+
Sbjct: 152 GGLPETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAI 211

Query: 121 SCTHD------------SSESNHFSVGSSTAMESSSTEQEVAFARGENEMEAIHKIQKHM 180
           +CTHD            SSES HFSV SSTAMESSSTEQE AF  GEN ME I K+Q+ +
Sbjct: 212 TCTHDTSTTRSMSFGGASSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQL 271

Query: 181 LELDSHE-----EHVNDDLEQCTEKELEDLFHSNQLNTNTYVLSSGRWTVNHEAQSRART 229
           LELDSHE     E+ NDD +QCT++ELE+LF+SN LN NTY+LSSGRW +NHEAQSRAR 
Sbjct: 272 LELDSHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINHEAQSRARA 331

[Close]

BLAST of Cp4.1LG08g11640 vs. ExPASy TrEMBL
Match: A0A1S3B5W9 (uncharacterized protein LOC103486380 OS=Cucumis melo OX=3656 GN=LOC103486380 PE=4 SV=1)

HSP 1 Score: 299 bits (766), Expect = 9.49e-100
Identity = 166/250 (66.40%), Postives = 186/250 (74.40%), Query Frame = 0


Query: 5   EHNPTEINSFYAISK--------KRKLPAEHLGLPSPKHKHSNEASPSKSVFLHAGLPET 64
           E NPTEINSFY ISK        KRKLPAEHLGLPSPKHKH +E   SKS FL+ GLPET
Sbjct: 2   EENPTEINSFYIISKLNPYDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLYGGLPET 61

Query: 65  ELMTVQFSKGNPNVMCIDKGSTPESVKDSNSFSDESDSVTSVFCGVKLELNQALSCTHD- 124
             M VQF K N NV+C D+GS PESVKDSNS S+ESDS TSVF G K ELNQA++CTHD 
Sbjct: 62  GHMNVQFIKENANVLCFDEGSRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTHDT 121

Query: 125 -----------SSESNHFSVGSSTAMESSSTEQEVAFARGENEMEAIHKIQKHMLELDSH 184
                      SSES HFSV SSTAME  STEQE AF  GEN +E IHK+Q+H+LELD H
Sbjct: 122 STTQSMSFGGASSESTHFSVESSTAMELISTEQETAFPSGENRIETIHKLQEHLLELDGH 181

Query: 185 E-----EHVNDDLEQCTEKELEDLFHSNQLNTNTYVLSSGRWTVNHEAQSRARTATIDQE 229
           E     E+ N D +QCT++ELE+LF+SN LN NTY+LSSGRW +NHEAQSRAR  TIDQE
Sbjct: 182 EDYDCAEYENGDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINHEAQSRARAPTIDQE 241

[Close]

BLAST of Cp4.1LG08g11640 vs. ExPASy TrEMBL
Match: A0A6J1F8W9 (uncharacterized protein LOC111441892 OS=Cucurbita moschata OX=3662 GN=LOC111441892 PE=4 SV=1)

HSP 1 Score: 297 bits (760), Expect = 8.58e-99
Identity = 169/256 (66.02%), Postives = 190/256 (74.22%), Query Frame = 0


Query: 1   MEEKEHNPTEINSFYAISK----------KRKLPAEHLGLPSPKHKHSNEASPSKSVFLH 60
           MEEK+ NP EINSFY ISK          KRKLPAEHLGLPSPKHKH NE  PSK  FL+
Sbjct: 1   MEEKKQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLY 60

Query: 61  AGLPETELMTVQFSKGNPNVMCIDKGSTPESVKDSNSFSDESDSVTSVFCGVKLELNQAL 120
            G PETE M VQF KG+ NV+  D GS+PES KDSNSF +ESDS TSVF G K ELNQA 
Sbjct: 61  DGFPETEHMNVQFIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQA- 120

Query: 121 SCTHDSS------------ESNHFSVGSSTAMESSSTEQEVAFARGENEMEAIHKIQKHM 180
            CT+DSS            ES HFSV SSTAMESSSTEQEVAFA GEN +E +HK+Q+H+
Sbjct: 121 -CTYDSSSTQCMSFGGASSESTHFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHL 180

Query: 181 LELDSHE-----EHVNDDLEQCTEKELEDLFHSNQLNTNTYVLSSGRWTVNHEAQSRART 229
           LELDS E     E+ +D+ EQCT++ELEDLF+SN L+ N Y+LSSGRWTVNHEAQS AR 
Sbjct: 181 LELDSREDYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNHEAQSSARA 240

[Close]

BLAST of Cp4.1LG08g11640 vs. TAIR 10
Match: AT2G37678.1 (far-red elongated hypocotyl 1 )

HSP 1 Score: 55.5 bits (132), Expect = 6.7e-08
Identity = 65/235 (27.66%), Postives = 99/235 (42.13%), Query Frame = 0


Query: 1   MEEKEHNPTEINSFYAI---SKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHAGLPETE 60
           ++     P+EINSF+ +   S K  L  E + + S K K   + S            E  
Sbjct: 6   VDNNNEKPSEINSFHHMIISSSKNVLKMEEVEV-SKKRKFQTDQS-----------DELS 65

Query: 61  LMTVQFSKGNPNVMCIDKGSTPESVKDSNSFSDESDSVTSVFCGVKLELNQALSCTHDSS 120
           L+ +       NV C +  +    +    S S   +S TS+ C   +E+ +         
Sbjct: 66  LLPLSKHTCFANVACSENTNGNSEIDTEYSMSSYVNSTTSMECNNDIEMKEE-------- 125

Query: 121 ESNHFSVGSSTAMESSSTEQEVAFARGENEMEAI-HKIQKHMLELDSHEEHVNDDLEQCT 180
                S GS    +  S E  + +  G   +E    K+ +++L LD  EE   +D + C+
Sbjct: 126 -----SSGSCGEDKMISFESHLDYIYGTQNLEDFSEKVIENILYLDEQEEE-EEDAKGCS 185

Query: 181 EKELEDLFHSNQLNTNTYVLSSGRWTVNHEAQS--RARTATIDQEFEQFFSMLML 230
                        N   +VLSSGRWTVN +  +    +  TIDQEFEQ+FS LML
Sbjct: 186 S------------NAAKFVLSSGRWTVNQDDSTLHETKKPTIDQEFEQYFSTLML 202

[Close]

BLAST of Cp4.1LG08g11640 vs. TAIR 10
Match: AT5G02200.1 (far-red-elongated hypocotyl1-like )

HSP 1 Score: 48.5 bits (114), Expect = 8.2e-06
Identity = 59/214 (27.57%), Postives = 99/214 (46.26%), Query Frame = 0


Query: 18  SKKRKLPAEHLG-LPSPKHKHSNEASPSKSVFLHAGLPETELMTVQFSKGNPNVMCIDKG 77
           SKKRKL AE    LP PKH      S  ++  +++  P + +   + S    N    D+ 
Sbjct: 11  SKKRKLHAEESDLLPLPKH----FCSEHQASLVNSSCPSSVIDYAECSYAMENTKTSDEA 70

Query: 78  STPESVKDSNSFSDESDSVTSVFCGVKLELNQALSCTHDSSESNHFSVGSSTAMESSSTE 137
           S+  S                 F G  L +           + + +S GSS++  ++++ 
Sbjct: 71  SSSAS-----------------FTGPSLYM----------FKDSIYSTGSSSSGYAATSS 130

Query: 138 QEVAFARGENEMEAIHKIQKHMLELDSHEEHVNDDLEQCTEKELEDLFHSNQLNTNTYVL 197
            E  F++ +      HK Q+   +  +H E +  D E   E +L+++ +       +Y+L
Sbjct: 131 IEQCFSKVD------HKTQEDTQDF-THMEFIYHDSEFAVE-DLQEVLNP----VESYIL 181

Query: 198 SSGRWTVNHEAQSRART-ATIDQEFEQFFSMLML 230
           SS RW+V+++    A T  TIDQEFEQ+FS LM+
Sbjct: 191 SSARWSVSNQDSKEATTKPTIDQEFEQYFSTLMM 181

[Close]

BLAST of Cp4.1LG08g11640 vs. TAIR 10
Match: AT5G02200.2 (far-red-elongated hypocotyl1-like )

HSP 1 Score: 48.5 bits (114), Expect = 8.2e-06
Identity = 59/214 (27.57%), Postives = 99/214 (46.26%), Query Frame = 0


Query: 18  SKKRKLPAEHLG-LPSPKHKHSNEASPSKSVFLHAGLPETELMTVQFSKGNPNVMCIDKG 77
           SKKRKL AE    LP PKH      S  ++  +++  P + +   + S    N    D+ 
Sbjct: 31  SKKRKLHAEESDLLPLPKH----FCSEHQASLVNSSCPSSVIDYAECSYAMENTKTSDEA 90

Query: 78  STPESVKDSNSFSDESDSVTSVFCGVKLELNQALSCTHDSSESNHFSVGSSTAMESSSTE 137
           S+  S                 F G  L +           + + +S GSS++  ++++ 
Sbjct: 91  SSSAS-----------------FTGPSLYM----------FKDSIYSTGSSSSGYAATSS 150

Query: 138 QEVAFARGENEMEAIHKIQKHMLELDSHEEHVNDDLEQCTEKELEDLFHSNQLNTNTYVL 197
            E  F++ +      HK Q+   +  +H E +  D E   E +L+++ +       +Y+L
Sbjct: 151 IEQCFSKVD------HKTQEDTQDF-THMEFIYHDSEFAVE-DLQEVLNP----VESYIL 201

Query: 198 SSGRWTVNHEAQSRART-ATIDQEFEQFFSMLML 230
           SS RW+V+++    A T  TIDQEFEQ+FS LM+
Sbjct: 211 SSARWSVSNQDSKEATTKPTIDQEFEQYFSTLMM 201

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g11640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S4Q6	9.5e-07	27.66	Protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Arabidopsis thaliana OX=3702 GN=FHY1 PE...	[more]
A8MR65	1.2e-04	27.57	Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE OS=Arabidopsis thaliana OX=3702 GN=FH...	[more]

BLAST of Cp4.1LG08g11640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540032.1	2.02e-156	100.00	protein FAR-RED ELONGATED HYPOCOTYL 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6596403.1	3.69e-143	92.58	Protein FAR-RED ELONGATED HYPOCOTYL 1, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022948410.1	1.68e-139	90.83	protein FAR-RED ELONGATED HYPOCOTYL 1-like [Cucurbita moschata] >XP_022948418.1 ...	[more]
XP_022971458.1	1.04e-133	88.21	protein FAR-RED ELONGATED HYPOCOTYL 1-like isoform X1 [Cucurbita maxima] >XP_022...	[more]
XP_004137783.2	1.76e-100	67.19	protein FAR-RED ELONGATED HYPOCOTYL 1 [Cucumis sativus] >KGN58861.1 hypothetical...	[more]

BLAST of Cp4.1LG08g11640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G9S1	8.13e-140	90.83	protein FAR-RED ELONGATED HYPOCOTYL 1-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1I6X2	5.02e-134	88.21	protein FAR-RED ELONGATED HYPOCOTYL 1-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A0A0LFJ8	8.54e-101	67.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734140 PE=4 SV=1	[more]
A0A1S3B5W9	9.49e-100	66.40	uncharacterized protein LOC103486380 OS=Cucumis melo OX=3656 GN=LOC103486380 PE=...	[more]
A0A6J1F8W9	8.58e-99	66.02	uncharacterized protein LOC111441892 OS=Cucurbita moschata OX=3662 GN=LOC1114418...	[more]

BLAST of Cp4.1LG08g11640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37678.1	6.7e-08	27.66	far-red elongated hypocotyl 1	[more]
AT5G02200.1	8.2e-06	27.57	far-red-elongated hypocotyl1-like	[more]
AT5G02200.2	8.2e-06	27.57	far-red-elongated hypocotyl1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..138
None	No IPR available	PANTHER	PTHR37723:SF1	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 1..229
IPR037766	Protein FAR-RED ELONGATED HYPOCOTYL 1	PANTHER	PTHR37723	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 1..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g11640.1	Cp4.1LG08g11640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051457	maintenance of protein location in nucleus
biological_process	GO:0009639	response to red or far red light
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus