Cp4.1LG08g11380 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

BLAST of Cp4.1LG08g11380 vs. ExPASy Swiss-Prot
Match: Q9ZUT5 (Pentatricopeptide repeat-containing protein At2g37310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E49 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.5e-11
Identity = 28/62 (45.16%), Postives = 45/62 (72.58%), Query Frame = 0

Query: 77  REILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVIVLQACAQLNYLILGME 136
           R+++SWN+M++  SQ   + +CK++YKAML+  + +PN +T + V QAC Q + LI G+E
Sbjct: 196 RDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLE 255

Query: 137 VH 139
           VH
Sbjct: 256 VH 257

BLAST of Cp4.1LG08g11380 vs. ExPASy Swiss-Prot
Match: Q9C501 (Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E57 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 9.7e-07
Identity = 25/62 (40.32%), Postives = 38/62 (61.29%), Query Frame = 0

Query: 77  REILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVIVLQACAQLNYLILGME 136
           R++ SWNA++A C+Q   + E   L++ M++   +RPN +T V VL ACAQ   L L   
Sbjct: 222 RDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKG 281

Query: 137 VH 139
           +H
Sbjct: 282 IH 283

BLAST of Cp4.1LG08g11380 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 5.3e-05
Identity = 24/63 (38.10%), Postives = 40/63 (63.49%), Query Frame = 0

Query: 76  LREILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVIVLQACAQLNYLILGM 135
           +++++SWNAM++  ++   Y E  EL+K M+    +RP+  T V V+ ACAQ   + LG 
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMK-TNVRPDESTMVTVVSACAQSGSIELGR 287

Query: 136 EVH 139
           +VH
Sbjct: 288 QVH 289

BLAST of Cp4.1LG08g11380 vs. ExPASy Swiss-Prot
Match: O49399 (Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E101 PE=3 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 3.5e-04
Identity = 25/63 (39.68%), Postives = 34/63 (53.97%), Query Frame = 0

Query: 76  LREILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVIVLQACAQLNYLILGM 135
           +R+++SWNAMV   +    Y E  E++  ML     +P+  T V VL ACA L  L  G 
Sbjct: 265 VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE 324

Query: 136 EVH 139
            VH
Sbjct: 325 WVH 327

BLAST of Cp4.1LG08g11380 vs. NCBI nr
Match: XP_023539538.1 (pentatricopeptide repeat-containing protein At2g37310-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268 bits (686), Expect = 3.02e-87
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query: 1   MTNAKPTSLQISVPASALYPWSLQAIRRDDGMNYGAYGRFIQLAPTSSSSASATASRSSC 60
           MTNAKPTSLQISVPASALYPWSLQAIRRDDGMNYGAYGRFIQLAPTSSSSASATASRSSC
Sbjct: 1   MTNAKPTSLQISVPASALYPWSLQAIRRDDGMNYGAYGRFIQLAPTSSSSASATASRSSC 60

Query: 61  SMFCRSREFPRIEECLREILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVI 120
           SMFCRSREFPRIEECLREILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVI
Sbjct: 61  SMFCRSREFPRIEECLREILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVI 120

Query: 121 VLQACAQLNYLILGME 136
           VLQACAQLNYLILGME
Sbjct: 121 VLQACAQLNYLILGME 136

BLAST of Cp4.1LG08g11380 vs. NCBI nr
Match: KAG7027978.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 138 bits (347), Expect = 4.75e-36
Identity = 77/112 (68.75%), Postives = 83/112 (74.11%), Query Frame = 0

Query: 1   MTNAKPTSLQISVPASALYPWSLQAIRRDDGMNYGAYGRFIQLAPTSSSSASATASRSSC 60
           MTNAKPTSLQISVPASALYPW LQAIRR+DGMNYGAYGRFIQ  P SSSSASATASRSSC
Sbjct: 1   MTNAKPTSLQISVPASALYPWVLQAIRRNDGMNYGAYGRFIQHVPASSSSASATASRSSC 60

Query: 61  SMFCRSREFPRIEECLREILSWNAM-VAECSQGWFYGECKELYKAMLSLVEL 111
           SMFCRSREFPRIE     I  W      +C +  F+    ++ K  LSL  L
Sbjct: 61  SMFCRSREFPRIEGHRLLIKIWQPWRCLQCVRYTFHNMQSDMLKLFLSLFNL 112

BLAST of Cp4.1LG08g11380 vs. NCBI nr
Match: XP_022145703.1 (pentatricopeptide repeat-containing protein At2g37310 [Momordica charantia])

HSP 1 Score: 94.0 bits (232), Expect = 3.43e-19
Identity = 51/70 (72.86%), Postives = 56/70 (80.00%), Query Frame = 0

Query: 69  FPRIEECLREILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVIVLQACAQL 128
           F R+ E  R+I+SWNAMVA  SQG FY ECKEL+K MLS VEL+PNALTAV VLQACAQ 
Sbjct: 190 FGRMPE--RDIVSWNAMVAGFSQGGFYEECKELFKEMLSSVELKPNALTAVSVLQACAQS 249

Query: 129 NYLILGMEVH 138
           N LI GMEVH
Sbjct: 250 NDLIFGMEVH 257

BLAST of Cp4.1LG08g11380 vs. NCBI nr
Match: XP_038905794.1 (pentatricopeptide repeat-containing protein At2g37310 [Benincasa hispida] >XP_038905795.1 pentatricopeptide repeat-containing protein At2g37310 [Benincasa hispida] >XP_038905796.1 pentatricopeptide repeat-containing protein At2g37310 [Benincasa hispida] >XP_038905797.1 pentatricopeptide repeat-containing protein At2g37310 [Benincasa hispida])

HSP 1 Score: 93.6 bits (231), Expect = 4.68e-19
Identity = 50/70 (71.43%), Postives = 56/70 (80.00%), Query Frame = 0

Query: 69  FPRIEECLREILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVIVLQACAQL 128
           F R+ E  ++I+SWNAMVA  SQG FY ECKEL+KAMLS VEL+PNALT V VLQACAQ 
Sbjct: 195 FDRMPE--KDIVSWNAMVAGYSQGGFYEECKELFKAMLSSVELKPNALTTVSVLQACAQS 254

Query: 129 NYLILGMEVH 138
           N LI GMEVH
Sbjct: 255 NDLIFGMEVH 262

BLAST of Cp4.1LG08g11380 vs. NCBI nr
Match: XP_022983956.1 (pentatricopeptide repeat-containing protein At2g37310 [Cucurbita maxima] >XP_022983957.1 pentatricopeptide repeat-containing protein At2g37310 [Cucurbita maxima])

HSP 1 Score: 87.4 bits (215), Expect = 6.63e-17
Identity = 45/62 (72.58%), Postives = 50/62 (80.65%), Query Frame = 0

Query: 77  REILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVIVLQACAQLNYLILGME 136
           R+I+SWNAMVA  SQG FY +CKEL+KAML   E +PNALTAV VLQACAQ N LI GME
Sbjct: 172 RDIVSWNAMVAGYSQGGFYEDCKELFKAMLGSGEPKPNALTAVSVLQACAQSNDLIFGME 231

Query: 137 VH 138
           VH
Sbjct: 232 VH 233

BLAST of Cp4.1LG08g11380 vs. ExPASy TrEMBL
Match: A0A6J1CWN9 (pentatricopeptide repeat-containing protein At2g37310 OS=Momordica charantia OX=3673 GN=LOC111015095 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.66e-19
Identity = 51/70 (72.86%), Postives = 56/70 (80.00%), Query Frame = 0

Query: 69  FPRIEECLREILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVIVLQACAQL 128
           F R+ E  R+I+SWNAMVA  SQG FY ECKEL+K MLS VEL+PNALTAV VLQACAQ 
Sbjct: 190 FGRMPE--RDIVSWNAMVAGFSQGGFYEECKELFKEMLSSVELKPNALTAVSVLQACAQS 249

Query: 129 NYLILGMEVH 138
           N LI GMEVH
Sbjct: 250 NDLIFGMEVH 257

BLAST of Cp4.1LG08g11380 vs. ExPASy TrEMBL
Match: A0A6J1J0S5 (pentatricopeptide repeat-containing protein At2g37310 OS=Cucurbita maxima OX=3661 GN=LOC111482423 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.21e-17
Identity = 45/62 (72.58%), Postives = 50/62 (80.65%), Query Frame = 0

Query: 77  REILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVIVLQACAQLNYLILGME 136
           R+I+SWNAMVA  SQG FY +CKEL+KAML   E +PNALTAV VLQACAQ N LI GME
Sbjct: 172 RDIVSWNAMVAGYSQGGFYEDCKELFKAMLGSGEPKPNALTAVSVLQACAQSNDLIFGME 231

Query: 137 VH 138
           VH
Sbjct: 232 VH 233

BLAST of Cp4.1LG08g11380 vs. ExPASy TrEMBL
Match: A0A2P5DHP6 (Tetratricopeptide-like helical domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_062650 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 8.09e-17
Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 0

Query: 76  LREILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVIVLQACAQLNYLILGM 135
           +R+I+SWN+M+A  SQG FY ECK+LY+ ML LVELRPNA+T V VLQAC Q   LI GM
Sbjct: 184 VRDIVSWNSMIAGYSQGGFYEECKKLYREMLGLVELRPNAVTMVSVLQACGQSKDLIFGM 243

Query: 136 EVH 138
           EVH
Sbjct: 244 EVH 246

BLAST of Cp4.1LG08g11380 vs. ExPASy TrEMBL
Match: A0A2P5FXD7 (Tetratricopeptide-like helical domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_014460 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 8.09e-17
Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 0

Query: 76  LREILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVIVLQACAQLNYLILGM 135
           +R+I+SWN+M+A  SQG FY ECK+LY+ ML LVELRPNA+T V VLQAC Q   LI GM
Sbjct: 184 VRDIVSWNSMIAGYSQGGFYEECKKLYREMLGLVELRPNAVTMVSVLQACGQSKDLIFGM 243

Query: 136 EVH 138
           EVH
Sbjct: 244 EVH 246

BLAST of Cp4.1LG08g11380 vs. ExPASy TrEMBL
Match: A0A803PU43 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.50e-16
Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = 0

Query: 76  LREILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVIVLQACAQLNYLILGM 135
           LR+I+SWN+M+A  SQG FY ECKEL+K ML  VEL+PNA+T V VLQAC Q   LI GM
Sbjct: 183 LRDIVSWNSMIAGYSQGGFYDECKELFKEMLGSVELKPNAVTLVSVLQACGQSKDLIFGM 242

Query: 136 EVH 138
           EVH
Sbjct: 243 EVH 245

BLAST of Cp4.1LG08g11380 vs. TAIR 10
Match: AT2G37310.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 6.0e-12
Identity = 28/62 (45.16%), Postives = 45/62 (72.58%), Query Frame = 0

Query: 77  REILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVIVLQACAQLNYLILGME 136
           R+++SWN+M++  SQ   + +CK++YKAML+  + +PN +T + V QAC Q + LI G+E
Sbjct: 196 RDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLE 255

Query: 137 VH 139
           VH
Sbjct: 256 VH 257

BLAST of Cp4.1LG08g11380 vs. TAIR 10
Match: AT1G33350.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 6.9e-08
Identity = 25/62 (40.32%), Postives = 38/62 (61.29%), Query Frame = 0

Query: 77  REILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVIVLQACAQLNYLILGME 136
           R++ SWNA++A C+Q   + E   L++ M++   +RPN +T V VL ACAQ   L L   
Sbjct: 222 RDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKG 281

Query: 137 VH 139
           +H
Sbjct: 282 IH 283

BLAST of Cp4.1LG08g11380 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 3.8e-06
Identity = 24/63 (38.10%), Postives = 40/63 (63.49%), Query Frame = 0

Query: 76  LREILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVIVLQACAQLNYLILGM 135
           +++++SWNAM++  ++   Y E  EL+K M+    +RP+  T V V+ ACAQ   + LG 
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMK-TNVRPDESTMVTVVSACAQSGSIELGR 287

Query: 136 EVH 139
           +VH
Sbjct: 288 QVH 289

BLAST of Cp4.1LG08g11380 vs. TAIR 10
Match: AT4G18840.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 46.2 bits (108), Expect = 2.5e-05
Identity = 25/63 (39.68%), Postives = 34/63 (53.97%), Query Frame = 0

Query: 76  LREILSWNAMVAECSQGWFYGECKELYKAMLSLVELRPNALTAVIVLQACAQLNYLILGM 135
           +R+++SWNAMV   +    Y E  E++  ML     +P+  T V VL ACA L  L  G 
Sbjct: 265 VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE 324

Query: 136 EVH 139
            VH
Sbjct: 325 WVH 327

BLAST of Cp4.1LG08g11380 vs. TAIR 10
Match: AT2G39620.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 44.7 bits (104), Expect = 7.1e-05
Identity = 27/90 (30.00%), Postives = 47/90 (52.22%), Query Frame = 0

Query: 54  TASRSSCSMFCRSREFPRIEECL-----REILSWNAMVAECSQGWFYGECKELYKAMLSL 113
           + + S  SM+ +  E    E+       R+++SW+AM+A   Q   + E   L++ M+  
Sbjct: 336 SVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMR- 395

Query: 114 VELRPNALTAVIVLQACAQLNYLILGMEVH 139
           + ++PNA+T   VLQ CA +    LG  +H
Sbjct: 396 IHIKPNAVTLTSVLQGCAGVAASRLGKSIH 424