Cp4.1LG08g11260 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g11260
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	60S ribosomal protein L4-like
Location	Cp4.1LG08: 8460182 .. 8463076 (-)
RNA-Seq Expression	Cp4.1LG08g11260
Synteny	Cp4.1LG08g11260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTATAAATTGACCAGCATTTCTCCCCCTCGTTTTCCAAGAGGTAAAAACCCTAGTTTGCTCCGGCTACCACACACCCGTCCAAAATGGCCGCCGCAGCTGCTCGCCCTTTGGTCGCCGTCCAATCTCTCGAAGGAGATATGGCCACTGATGCTGCCCCGACTGTGCCGTTGCCCGATGTTATGAAAGCTTCCATTCGACCGGATATCGTCAATTTTGTCCACGCCAATATCTCCAAGAACCGCCGCCAACCCTATGCTGTGAGCAAGCGTGCCGGTCATCAAACTTCCGCAGAGTCATGGGGTACAGGACGAGCTGTTTCTCGTATTCCTCGTGTTCCTGGTGGTGGTACTCACCGCGCTGGTCAAGGAGCTTTTGGAAACATGTGTCGAGGAGGACGCATGTTTGCTCCAACTAAGATCTGGCGCCGATGGCACCGAAAGATCAACGTGAATCAAAAGAGGTACGCCGTTGTTTCTGCCATTGCTGCTTCTGCTGTTCCTTCTTTGGTTTTGGCTCGTGGTCACCGGATCGAGTCTGTTCCGGAACTGCCCCTTGTAATTAGCGACTCGGCTGAGGGAATCGAGAAGACCTCTTCTGCGATTAAGGTTTTGAAGCAGGTTGGTGCGTTTCCTGATGCTGAGAAGGCGAAGGACAGTCACGCCATCCGCCCTGGTAAGGGTAAGATGAGGAATCGTCGCTACATTTCGCGGAAGGGTCCATTGATTGTGTATGGTACTGAAGGTGCTAAGCTTGTGAAGGCCTTCCGTAACATTCCTGGTATCGAGGTTGTGAATGTCGAGAGGCTGAATCTTTTGAAGTTAGCCCCTGGAGGTCATCTTGGAAGATTTGTTATCTGGACTAAAACTGCTTTTGAGAAGCTCGATTCCATCTATGGATCGTTTGAGAAGTCATCTGAGAAGAAGAAGGGTTACGTTCTTCCGAGAGCAAAGATGGTCAATGCTGATTTGTCTAGGATTATAAACTCTGATGAGGTTCAATCTGTCGTTAATCCCATCAAGAAGGCTGTGAAGAGACCTTCTCTAAAGAAGAACCCACTCAAGAACCTTAATGCCATGTTGAAGCTTAACCCATATGCTAAAACTGCAAGGAGAATGTCTTTATTGGCTGAGGCACAACGTGTGAAAGCTAAGAAGGAGAAGCTCGACAAGAAGAGGAACATTATCCCGAAGGTATCTTTTGAATTTCTCTCTGTGGATTTAGAATTTTTAATTACTCTCTGCTTGGTTTCAATATTTAGGTGGTAGCTTTGTTTTATCAACCAAATATGTGGTAGTTCACAATATTTCAAATGTTAAAAGTGCCAAGATTTTTAAATGGGATTTGATATAATGTAGTGATATGATAGGTTTAGAGTATTGAATTCACCTCTTTCATTTTGAGCGATGCATTCAACTGTTGATTATAATGCTTTAGCCTGGGCTTTATTATTATTATTTTTTTTTGGCTAGATTTTAGATTATGGTTATATAATTTGTATGTATGACATCATGTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTGCAACTTGGTAGATGAGTATTGGGTGCTGTATAGCTTTATTTGTCACGTCTCTCTTAGATATCAAGTGATCATTTCCTTTCTTTCAATTTTATGTTGGTAAATTCCTTTTATGCTTGATACATAGCATATTTTTTATGACATTGATGAAGTGTCTGTGAATTTGTGGTCCATTATTTTCTTGGAACTGATTGCTTAATTTATTAGTTTTCTAAGTTTATTCACTTGTTGTATAGTTGTATCAGACTTTGTAGTTTTCGTGTATAGCTTGGAACTGTAATTTTTTTCAGCTCGAATAGGTCACCTGATTGTGGCTTTGCATATGTGATATTGAGACCCATATTGACCCTTGTGGTGGCCATTTTTTTTTTCAGGAGGAGGCTTCAGGAATAAGGGCAGCAGGCAAAGCATGGTATCAGACAATGATTTCAGACAGTGATTACACCGAGTTTGACAACTTCTCCAAGTGGCTTGGTGTCTCTCAGTGATTTCGTTTCTGTTTGACAAAAATTTCCATAGACCTTAGTTTAATTAAATTTTGTACGCGCTGCTGTTTCTGCTGCTTTTCTGTTTTGCGTCATGGAAGAAAGTAGGCGGGGTGAGTATACTGAATGGGATGTTGAGTTCCCCCTATTCTCTTGCCTACCTTGTCCTTGTGGAGGATTATTTCTTTTTGGAAATGGAATTGAACATCTGAAGAGCTTAGAAGGTGAGTTTAGTAATTTGGACTGAGATTTACACTTCAAAACTTTTGTTTAAATTTTGAATCTACTGTTTTCTTTTTTTTTATGATTAGTTATATAGATAGCCTGGTATACTTTGCGATTGATTGAACATAGTATGATTTTGAAGTTCTAACGGCATGGGTGGAGAAGCCTTAGATCTTGAACCATTTCCCTACTACTTCTGCCAGCGTGTTCTCGTGCCCCTAGGTATTCTCTACATACATACCCACCTGTGTTAGTTTTGGGTACAGGTACCCTTTTGTTAGGTCATTCAAGCTTTTCGTGAGAATTTGAAATGGGTTACTTCAGCGTCGTAGCGCTTGGTACTCAAACATTGGTTCGAGTTATTTTTTCAACCCCTT

mRNA sequence

CACTATAAATTGACCAGCATTTCTCCCCCTCGTTTTCCAAGAGGTAAAAACCCTAGTTTGCTCCGGCTACCACACACCCGTCCAAAATGGCCGCCGCAGCTGCTCGCCCTTTGGTCGCCGTCCAATCTCTCGAAGGAGATATGGCCACTGATGCTGCCCCGACTGTGCCGTTGCCCGATGTTATGAAAGCTTCCATTCGACCGGATATCGTCAATTTTGTCCACGCCAATATCTCCAAGAACCGCCGCCAACCCTATGCTGTGAGCAAGCGTGCCGGTCATCAAACTTCCGCAGAGTCATGGGGTACAGGACGAGCTGTTTCTCGTATTCCTCGTGTTCCTGGTGGTGGTACTCACCGCGCTGGTCAAGGAGCTTTTGGAAACATGTGTCGAGGAGGACGCATGTTTGCTCCAACTAAGATCTGGCGCCGATGGCACCGAAAGATCAACGTGAATCAAAAGAGGTACGCCGTTGTTTCTGCCATTGCTGCTTCTGCTGTTCCTTCTTTGGTTTTGGCTCGTGGTCACCGGATCGAGTCTGTTCCGGAACTGCCCCTTGTAATTAGCGACTCGGCTGAGGGAATCGAGAAGACCTCTTCTGCGATTAAGGTTTTGAAGCAGGTTGGTGCGTTTCCTGATGCTGAGAAGGCGAAGGACAGTCACGCCATCCGCCCTGGTAAGGGTAAGATGAGGAATCGTCGCTACATTTCGCGGAAGGGTCCATTGATTGTGTATGGTACTGAAGGTGCTAAGCTTGTGAAGGCCTTCCGTAACATTCCTGGTATCGAGGTTGTGAATGTCGAGAGGCTGAATCTTTTGAAGTTAGCCCCTGGAGGTCATCTTGGAAGATTTGTTATCTGGACTAAAACTGCTTTTGAGAAGCTCGATTCCATCTATGGATCGTTTGAGAAGTCATCTGAGAAGAAGAAGGGTTACGTTCTTCCGAGAGCAAAGATGGTCAATGCTGATTTGTCTAGGATTATAAACTCTGATGAGGTTCAATCTGTCGTTAATCCCATCAAGAAGGCTGTGAAGAGACCTTCTCTAAAGAAGAACCCACTCAAGAACCTTAATGCCATGTTGAAGCTTAACCCATATGCTAAAACTGCAAGGAGAATGTCTTTATTGGCTGAGGCACAACGTGTGAAAGCTAAGAAGGAGAAGCTCGACAAGAAGAGGAACATTATCCCGAAGGAGGAGGCTTCAGGAATAAGGGCAGCAGGCAAAGCATGGTATCAGACAATGATTTCAGACAGTGATTACACCGAGTTTGACAACTTCTCCAAGTGGCTTGGTGTCTCTCAGTGATTTCGTTTCTGTTTGACAAAAATTTCCATAGACCTTAGTTTAATTAAATTTTGTACGCGCTGCTGTTTCTGCTGCTTTTCTGTTTTGCGTCATGGAAGAAAGTAGGCGGGGTGAGTATACTGAATGGGATGTTGAGTTCCCCCTATTCTCTTGCCTACCTTGTCCTTGTGGAGGATTATTTCTTTTTGGAAATGGAATTGAACATCTGAAGAGCTTAGAAGGTGAGTTTAGTAATTTGGACTGAGATTTACACTTCAAAACTTTTGTTTAAATTTTGAATCTACTGTTTTCTTTTTTTTTATGATTAGTTATATAGATAGCCTGGTATACTTTGCGATTGATTGAACATAGTATGATTTTGAAGTTCTAACGGCATGGGTGGAGAAGCCTTAGATCTTGAACCATTTCCCTACTACTTCTGCCAGCGTGTTCTCGTGCCCCTAGGTATTCTCTACATACATACCCACCTGTGTTAGTTTTGGGTACAGGTACCCTTTTGTTAGGTCATTCAAGCTTTTCGTGAGAATTTGAAATGGGTTACTTCAGCGTCGTAGCGCTTGGTACTCAAACATTGGTTCGAGTTATTTTTTCAACCCCTT

Coding sequence (CDS)

ATGGCCGCCGCAGCTGCTCGCCCTTTGGTCGCCGTCCAATCTCTCGAAGGAGATATGGCCACTGATGCTGCCCCGACTGTGCCGTTGCCCGATGTTATGAAAGCTTCCATTCGACCGGATATCGTCAATTTTGTCCACGCCAATATCTCCAAGAACCGCCGCCAACCCTATGCTGTGAGCAAGCGTGCCGGTCATCAAACTTCCGCAGAGTCATGGGGTACAGGACGAGCTGTTTCTCGTATTCCTCGTGTTCCTGGTGGTGGTACTCACCGCGCTGGTCAAGGAGCTTTTGGAAACATGTGTCGAGGAGGACGCATGTTTGCTCCAACTAAGATCTGGCGCCGATGGCACCGAAAGATCAACGTGAATCAAAAGAGGTACGCCGTTGTTTCTGCCATTGCTGCTTCTGCTGTTCCTTCTTTGGTTTTGGCTCGTGGTCACCGGATCGAGTCTGTTCCGGAACTGCCCCTTGTAATTAGCGACTCGGCTGAGGGAATCGAGAAGACCTCTTCTGCGATTAAGGTTTTGAAGCAGGTTGGTGCGTTTCCTGATGCTGAGAAGGCGAAGGACAGTCACGCCATCCGCCCTGGTAAGGGTAAGATGAGGAATCGTCGCTACATTTCGCGGAAGGGTCCATTGATTGTGTATGGTACTGAAGGTGCTAAGCTTGTGAAGGCCTTCCGTAACATTCCTGGTATCGAGGTTGTGAATGTCGAGAGGCTGAATCTTTTGAAGTTAGCCCCTGGAGGTCATCTTGGAAGATTTGTTATCTGGACTAAAACTGCTTTTGAGAAGCTCGATTCCATCTATGGATCGTTTGAGAAGTCATCTGAGAAGAAGAAGGGTTACGTTCTTCCGAGAGCAAAGATGGTCAATGCTGATTTGTCTAGGATTATAAACTCTGATGAGGTTCAATCTGTCGTTAATCCCATCAAGAAGGCTGTGAAGAGACCTTCTCTAAAGAAGAACCCACTCAAGAACCTTAATGCCATGTTGAAGCTTAACCCATATGCTAAAACTGCAAGGAGAATGTCTTTATTGGCTGAGGCACAACGTGTGAAAGCTAAGAAGGAGAAGCTCGACAAGAAGAGGAACATTATCCCGAAGGAGGAGGCTTCAGGAATAAGGGCAGCAGGCAAAGCATGGTATCAGACAATGATTTCAGACAGTGATTACACCGAGTTTGACAACTTCTCCAAGTGGCTTGGTGTCTCTCAGTGA

Protein sequence

MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVERLNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINSDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ

Homology

[Close]

BLAST of Cp4.1LG08g11260 vs. ExPASy Swiss-Prot
Match: Q9XF97 (60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 5.8e-201
Identity = 356/405 (87.90%), Postives = 384/405 (94.81%), Query Frame = 0


Query: 2   AAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSK 61
           AAAAARPLV VQSLEGDMATD   TV LPDVMKASIRPDIV FVH+NISKN RQPYAVSK
Sbjct: 4   AAAAARPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYAVSK 63

Query: 62  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 121
           +AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 64  KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 123

Query: 122 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGA 181
           VNQKRYAVVSAIAASAVPSLVLARGH+IE+VPELPLV+SDS EG+E+TS+A+KVLKQ+GA
Sbjct: 124 VNQKRYAVVSAIAASAVPSLVLARGHKIETVPELPLVVSDSIEGVEETSAALKVLKQIGA 183

Query: 182 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVERL 241
           + DAEKAKDSH+IRPGKGKMRNRRYI+RKGPLIVYGTEGAKLVKAFRNIPGI+++NVERL
Sbjct: 184 YSDAEKAKDSHSIRPGKGKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERL 243

Query: 242 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS 301
           NLLKLAPGGHLGRFV+WTK+AFEKLDSIYGSF+K SEKK GYVLPR+KMVNADL+RIINS
Sbjct: 244 NLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVNADLARIINS 303

Query: 302 DEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 361
           DEVQSVV+PI++  KR  LKKNPL+ LN MLKLNPYAKTARRMSLLAEA+RVKAKKEKLD
Sbjct: 304 DEVQSVVSPIQEGSKRAPLKKNPLRILNTMLKLNPYAKTARRMSLLAEAERVKAKKEKLD 363

Query: 362 KKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 407
           KKR  I KEEAS I+AAGKAWYQTMISDSDYTEFDNF+KWLGVSQ
Sbjct: 364 KKRKPISKEEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGVSQ 408

[Close]

BLAST of Cp4.1LG08g11260 vs. ExPASy Swiss-Prot
Match: Q9SF40 (60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 2.6e-193
Identity = 337/406 (83.00%), Postives = 377/406 (92.86%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLV +Q+L+GDM+TD + TV LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQ+G
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PG+E+ +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPRAKMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDE+QSVVNPIKK  KR  LKKNPLKNLN MLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 407
            KKR  + KEEA  I+AAGK+WY+TMISDSDYTEFDNF+KWLG SQ
Sbjct: 361 AKKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of Cp4.1LG08g11260 vs. ExPASy Swiss-Prot
Match: P49691 (60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2)

HSP 1 Score: 674.5 bits (1739), Expect = 7.6e-193
Identity = 336/406 (82.76%), Postives = 375/406 (92.36%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           +A+AAARPLV VQ L+GDM+TD + TV LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQ+G
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PG+E+ +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPRAKMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVVNPIK   KR  LKKNPLKNLN M KLNPYAKTA+RMSLLAEA RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 407
           +KKR ++ KEEA  I+AAGKAWYQTMISDSDYTEFDNF+KWLG SQ
Sbjct: 362 EKKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]

BLAST of Cp4.1LG08g11260 vs. ExPASy Swiss-Prot
Match: P08429 (60S ribosomal protein L4-A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2)

HSP 1 Score: 437.6 bits (1124), Expect = 1.6e-121
Identity = 219/361 (60.66%), Postives = 279/361 (77.29%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           ++ A ARPL++V S +G+    +   V +P V +A IRPDIVNFVH N+ KN RQPYAVS
Sbjct: 3   VSMACARPLISVYSEKGE---SSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYAVS 62

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++
Sbjct: 63  KLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRV 122

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180
           N  QKRYAV SA+AASA+P+L++++GHRIE +PE+PLV+ D  E  +KT  A+ +LK++ 
Sbjct: 123 NTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLK 182

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240
           A+ D +K   S  +R GKGKMRNRR I R+GP ++Y  E   LVKAFRNIPGI ++NV +
Sbjct: 183 AWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGLVKAFRNIPGITLLNVSK 242

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLL+LAPGGH+GRF IWT++AF KLD +YG++ KS++ K  Y LP  KM N DL+RI+ 
Sbjct: 243 LNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILK 302

Query: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           S E+Q  +    K VKR  LKKNPLKNL  M++LNPYAKTARR ++L + + +KAK++K 
Sbjct: 303 SQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKP 359

Query: 361 D 362
           D
Sbjct: 363 D 359

[Close]

BLAST of Cp4.1LG08g11260 vs. ExPASy Swiss-Prot
Match: P02385 (60S ribosomal protein L4-B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=2 SV=2)

HSP 1 Score: 437.2 bits (1123), Expect = 2.0e-121
Identity = 218/361 (60.39%), Postives = 279/361 (77.29%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           ++ A ARPL++V S +G+    +   V +P V KA IRPDIVNFVH N+ KN RQPYAVS
Sbjct: 3   VSMACARPLISVYSEKGE---TSGKNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 62

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++
Sbjct: 63  KLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRV 122

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180
           N  QKRYAV SA+AASA+P+L++++GHRIE +PE+PLV+ D  E  +KT  A+ +LK++ 
Sbjct: 123 NTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLK 182

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240
           A+ D +K   S  +R GKGKMRNRR I R+GP ++Y  E   ++KAFRNIPGI ++NV +
Sbjct: 183 AWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGIIKAFRNIPGITLLNVSK 242

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLL+LAPGGH+GRF IWT++AF KLD +YG++ KS++ K  Y LP  KM N DL+RI+ 
Sbjct: 243 LNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILK 302

Query: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           S E+Q  +    K VKR  LKKNPLKNL  M++LNPYAKTARR ++L + + +KAK++K 
Sbjct: 303 SQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKP 359

Query: 361 D 362
           D
Sbjct: 363 D 359

[Close]

BLAST of Cp4.1LG08g11260 vs. NCBI nr
Match: XP_023539772.1 (60S ribosomal protein L4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 785 bits (2026), Expect = 8.12e-286
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Cp4.1LG08g11260 vs. NCBI nr
Match: XP_023005914.1 (60S ribosomal protein L4-like [Cucurbita maxima])

HSP 1 Score: 784 bits (2025), Expect = 1.15e-285
Identity = 405/406 (99.75%), Postives = 406/406 (100.00%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180
           NVNQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Cp4.1LG08g11260 vs. NCBI nr
Match: XP_022944562.1 (60S ribosomal protein L4-like [Cucurbita moschata] >KAG6596446.1 60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027987.1 60S ribosomal protein L4-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 782 bits (2019), Expect = 9.48e-285
Identity = 404/406 (99.51%), Postives = 405/406 (99.75%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180
           NVNQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240
           A PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER
Sbjct: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Cp4.1LG08g11260 vs. NCBI nr
Match: KAG6580580.1 (60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017334.1 60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 768 bits (1982), Expect = 4.13e-279
Identity = 394/406 (97.04%), Postives = 401/406 (98.77%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIK LKQ+G
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQIG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240
           A PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGI++VNVER
Sbjct: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIKK VKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           DKKRNIIPKEEA+ ++AAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406

[Close]

BLAST of Cp4.1LG08g11260 vs. NCBI nr
Match: XP_023528888.1 (60S ribosomal protein L4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 768 bits (1982), Expect = 4.13e-279
Identity = 394/406 (97.04%), Postives = 401/406 (98.77%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIK LKQ+G
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQIG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240
           A PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIE+VNVER
Sbjct: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEIVNVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIKK VKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           DKKRNIIPKE+A+ ++AAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEDATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406

[Close]

BLAST of Cp4.1LG08g11260 vs. ExPASy TrEMBL
Match: A0A6J1L0N2 (60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111498775 PE=3 SV=1)

HSP 1 Score: 784 bits (2025), Expect = 5.59e-286
Identity = 405/406 (99.75%), Postives = 406/406 (100.00%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180
           NVNQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Cp4.1LG08g11260 vs. ExPASy TrEMBL
Match: A0A6J1FVZ1 (60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111448977 PE=3 SV=1)

HSP 1 Score: 782 bits (2019), Expect = 4.59e-285
Identity = 404/406 (99.51%), Postives = 405/406 (99.75%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180
           NVNQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240
           A PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER
Sbjct: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Cp4.1LG08g11260 vs. ExPASy TrEMBL
Match: A0A6J1F3R9 (60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111442111 PE=3 SV=1)

HSP 1 Score: 764 bits (1974), Expect = 3.44e-278
Identity = 393/405 (97.04%), Postives = 400/405 (98.77%), Query Frame = 0


Query: 2   AAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSK 61
           AAAAARPLVAVQSLEGD+ATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSK
Sbjct: 3   AAAAARPLVAVQSLEGDIATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSK 62

Query: 62  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 121
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 63  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 122

Query: 122 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGA 181
           VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIK LKQVGA
Sbjct: 123 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQVGA 182

Query: 182 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVERL 241
            PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGI++VNVERL
Sbjct: 183 LPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 242

Query: 242 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS 301
           NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS
Sbjct: 243 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS 302

Query: 302 DEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 361
           DEVQSVV PIKK VKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD
Sbjct: 303 DEVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 362

Query: 362 KKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KKRNIIPKEEA+ ++AAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 363 KKRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407

[Close]

BLAST of Cp4.1LG08g11260 vs. ExPASy TrEMBL
Match: A0A6J1J5G3 (60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111481914 PE=3 SV=1)

HSP 1 Score: 763 bits (1970), Expect = 1.30e-277
Identity = 391/404 (96.78%), Postives = 399/404 (98.76%), Query Frame = 0


Query: 3   AAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSKR 62
           AAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSKR
Sbjct: 2   AAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSKR 61

Query: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 122
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121

Query: 123 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAF 182
           NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIK LKQ+GA 
Sbjct: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQIGAL 181

Query: 183 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVERLN 242
           PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGI++VNVERLN
Sbjct: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241

Query: 243 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINSD 302
           LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINSD
Sbjct: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINSD 301

Query: 303 EVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 362
           EVQSVV PIKK VKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAK+EKLDK
Sbjct: 302 EVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKQEKLDK 361

Query: 363 KRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KRNIIPKEEA+ ++AAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 362 KRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of Cp4.1LG08g11260 vs. ExPASy TrEMBL
Match: A0A6J1CWH7 (60S ribosomal protein L4 OS=Momordica charantia OX=3673 GN=LOC111015034 PE=3 SV=1)

HSP 1 Score: 757 bits (1954), Expect = 3.70e-275
Identity = 387/406 (95.32%), Postives = 400/406 (98.52%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLVAVQSLEGDMATD+APTV LPDVMKASIRPDIVNFVHANISKN RQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDSAPTVHLPDVMKASIRPDIVNFVHANISKNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180
           NVNQKRYAVVSAIAASA+PSLV+ARGHRIESVPE+PLVISDSAEGIEKTS+AIKVLKQ+G
Sbjct: 121 NVNQKRYAVVSAIAASAIPSLVMARGHRIESVPEMPLVISDSAEGIEKTSAAIKVLKQIG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEK SEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIIN 300

Query: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIKK VKRPSLKKNPLKNLN+ML+LNPYAKTARRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKDVKRPSLKKNPLKNLNSMLRLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           DKKRNIIPKE+AS I+AAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEDASAIKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406

[Close]

BLAST of Cp4.1LG08g11260 vs. TAIR 10
Match: AT3G09630.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 676.0 bits (1743), Expect = 1.9e-194
Identity = 337/406 (83.00%), Postives = 377/406 (92.86%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLV +Q+L+GDM+TD + TV LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQ+G
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PG+E+ +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPRAKMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDE+QSVVNPIKK  KR  LKKNPLKNLN MLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 407
            KKR  + KEEA  I+AAGK+WY+TMISDSDYTEFDNF+KWLG SQ
Sbjct: 361 AKKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of Cp4.1LG08g11260 vs. TAIR 10
Match: AT5G02870.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 674.5 bits (1739), Expect = 5.4e-194
Identity = 336/406 (82.76%), Postives = 375/406 (92.36%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           +A+AAARPLV VQ L+GDM+TD + TV LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQ+G
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PG+E+ +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPRAKMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVVNPIK   KR  LKKNPLKNLN M KLNPYAKTA+RMSLLAEA RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 407
           +KKR ++ KEEA  I+AAGKAWYQTMISDSDYTEFDNF+KWLG SQ
Sbjct: 362 EKKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]

BLAST of Cp4.1LG08g11260 vs. TAIR 10
Match: AT3G09630.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 669.5 bits (1726), Expect = 1.7e-192
Identity = 336/406 (82.76%), Postives = 376/406 (92.61%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLV +Q+L+GDM+TD + TV LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQ+G
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PG+E+ +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPRAKMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDE+QSVVNPIKK  KR  LKKNPLKNLN MLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 407
            KKR  + K EA  I+AAGK+WY+TMISDSDYTEFDNF+KWLG SQ
Sbjct: 361 AKKRKTVTK-EALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 405

[Close]

BLAST of Cp4.1LG08g11260 vs. TAIR 10
Match: AT5G02870.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 667.9 bits (1722), Expect = 5.1e-192
Identity = 335/406 (82.51%), Postives = 374/406 (92.12%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           +A+AAARPLV VQ L+GDM+TD + TV LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQ+G
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PG+E+ +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPRAKMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVVNPIK   KR  LKKNPLKNLN M KLNPYAKTA+RMSLLAEA RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 407
           +KKR ++ K EA  I+AAGKAWYQTMISDSDYTEFDNF+KWLG SQ
Sbjct: 362 EKKRKVVTK-EAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 406

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g11260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF97	5.8e-201	87.90	60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1	[more]
Q9SF40	2.6e-193	83.00	60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1	[more]
P49691	7.6e-193	82.76	60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2	[more]
P08429	1.6e-121	60.66	60S ribosomal protein L4-A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2	[more]
P02385	2.0e-121	60.39	60S ribosomal protein L4-B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=2 SV=2	[more]

BLAST of Cp4.1LG08g11260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539772.1	8.12e-286	100.00	60S ribosomal protein L4-like [Cucurbita pepo subsp. pepo]	[more]
XP_023005914.1	1.15e-285	99.75	60S ribosomal protein L4-like [Cucurbita maxima]	[more]
XP_022944562.1	9.48e-285	99.51	60S ribosomal protein L4-like [Cucurbita moschata] >KAG6596446.1 60S ribosomal p...	[more]
KAG6580580.1	4.13e-279	97.04	60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_023528888.1	4.13e-279	97.04	60S ribosomal protein L4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG08g11260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L0N2	5.59e-286	99.75	60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111498775 PE=3 S...	[more]
A0A6J1FVZ1	4.59e-285	99.51	60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111448977 PE=3...	[more]
A0A6J1F3R9	3.44e-278	97.04	60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111442111 PE=3...	[more]
A0A6J1J5G3	1.30e-277	96.78	60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111481914 PE=3 S...	[more]
A0A6J1CWH7	3.70e-275	95.32	60S ribosomal protein L4 OS=Momordica charantia OX=3673 GN=LOC111015034 PE=3 SV=...	[more]

BLAST of Cp4.1LG08g11260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09630.1	1.9e-194	83.00	Ribosomal protein L4/L1 family	[more]
AT5G02870.1	5.4e-194	82.76	Ribosomal protein L4/L1 family	[more]
AT3G09630.2	1.7e-192	82.76	Ribosomal protein L4/L1 family	[more]
AT5G02870.2	5.1e-192	82.51	Ribosomal protein L4/L1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 343..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..96
None	No IPR available	PANTHER	PTHR19431	60S RIBOSOMAL PROTEIN L4	coord: 3..406
None	No IPR available	PANTHER	PTHR19431:SF6	BNAC03G35890D PROTEIN	coord: 3..406
IPR025755	60S ribosomal protein L4, C-terminal domain	PFAM	PF14374	Ribos_L4_asso_C	coord: 281..353 e-value: 4.8E-28 score: 97.0
IPR002136	Ribosomal protein L4/L1e	PFAM	PF00573	Ribosomal_L4	coord: 27..267 e-value: 1.9E-40 score: 138.6
IPR023574	Ribosomal protein L4 domain superfamily	GENE3D	3.40.1370.10		coord: 4..309 e-value: 1.1E-142 score: 476.6
IPR023574	Ribosomal protein L4 domain superfamily	SUPERFAMILY	52166	Ribosomal protein L4	coord: 21..268
IPR013000	Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site	PROSITE	PS00939	RIBOSOMAL_L1E	coord: 121..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g11260.1	Cp4.1LG08g11260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome