Cp4.1LG08g10530 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g10530
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	homeobox-leucine zipper protein ATHB-22-like
Location	Cp4.1LG08: 8066394 .. 8068079 (+)
RNA-Seq Expression	Cp4.1LG08g10530
Synteny	Cp4.1LG08g10530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATATAGAAAAATAGAGAGGAGGGAAGAAAAAAGAAAAGTGATAAACAGTAGAGAGCAAAGGCATATGAACACTTTTCAACACTGATGACTCTCAACCTCCTCATTTGTAGCCCTAATTTTCAATTGCCCTAAAGTTCACTTTCTCTCTCCTCTCTCTGTTTCTCTCTCTATTTGTAGCTTCAATTCCCACTCAAAACCCTCACTTCCATCTTCCACATTTGAAGCTAATCTGATCGGAAAATTTCACCGGAGACCGGAAAACATGGAGTGGGCCACCGGAAGTTTCAGACCCTTTGTTTCTCGAGCGCCGGAATCTTCATTTGGGTTTCTCTATAACTATAATCTTGAACAGTATCAGGGTAATATTCAGTGTTCTTGAGGGTTTTTTTTTTTTTTTTTTTAATNTTTTTTGTTTATTTGATTTGTTCTAGTGGTTATAAACTTAAAAATAATGACACCCAGATCAGAAAAATCTGATCTTTCCACTTTTTTAGGTGTTTTTTTTTTTTTTTTTTCCGACAAGTAACTGTCACTAAACGAACGGATAATCGAAGATCTGAAACGGAGGTGGTTTTTTTTAATGAATGTTTCATGTTTTTCGAACATGATTCTCTTGCAGATCCATGGAGGATATAATTAATTATATAAAATAGTTGAAAGATTTGTAGAGTTTTGTTAATCTTGTCTCTGGGGTTTTGCTTCCATGAGCAGGCATAGATGTGAAGCATTCGGCGATGGCGGGGGCGTCGGAGACGGTATTGCAAGGGCTGGTTCCAGGGATGGACATGAACAGCTATGGAAATTTGGAGAAGAAGAAGCGGCTGAGCAGCGAGCAGCTCGACTCACTCGAACAAAGCTTCCAGGAGGAGATCAAGCTCGATCCCGACCGGAAGCAGAAGCTGGCCAAGGAGCTTGGTCTGCAGCCGCGCCAGATCGCCGTTTGGTTCCAGAACCGCCGTGCGCGGTGGAAGGCGAAGCAACTCGAGCACCTCTACGACACTCTCAAACAAGAGTTCGATGCCATTTCTAGAGAGAAACATAAGCTTCAAGAGGAGGTATGCTTTTTTTCCCTTGATCTATGAAGTTTAATTTTTTTTTCAGATCTTTTTAAGATCTCAACTTAATTAGTGAACTAAATTATGGGCTTTTTTATAACAAAATTACTTGTAATATATCTCATAAATCATTAATAAGTGGTTTTTAATCATCAAAAGTAATTCAACTTTTTAGAGAATTGAATTAGGGTTTGTCTATACTTGGTTCGATCTTGAGTATATCTCATAAATCGTTCGTTTTTACACAAATTCATTGCATTTGAAATAGAAAGTTCGGGGCTTTTTTAGTCAATGTGATTGGCAGTTTTGAACCGTTGGATGTAGAAAAGATGAATATCGTCTTTAACCCTCGTAGGTAATGAAACTGAAAAGCATGCTGAGAGAGCTTCAAACTGCGAGGAACCAAGTGTCGACGGTGTACACTGAATTGTCGGGGGAGGAGACGGTGGAGAGCACCTCGGTCGGAGCTGGCTGCTCGAGCAAGCCGAGTGCGGCGGCGGTGGCGGCAGCAGCAGCAAATCAATACCCGACGCCACCGGAGCAGTGCAACTATGTGTTCAACACTGAGGAGTACAACCCCATGTCTCCAACATTCTGGGGGACACTCCCATCGTCTTATCATCCTCAG

mRNA sequence

TATATATAGAAAAATAGAGAGGAGGGAAGAAAAAAGAAAAGTGATAAACAGTAGAGAGCAAAGGCATATGAACACTTTTCAACACTGATGACTCTCAACCTCCTCATTTGTAGCCCTAATTTTCAATTGCCCTAAAGTTCACTTTCTCTCTCCTCTCTCTGTTTCTCTCTCTATTTGTAGCTTCAATTCCCACTCAAAACCCTCACTTCCATCTTCCACATTTGAAGCTAATCTGATCGGAAAATTTCACCGGAGACCGGAAAACATGGAGTGGGCCACCGGAAGTTTCAGACCCTTTGTTTCTCGAGCGCCGGAATCTTCATTTGGGTTTCTCTATAACTATAATCTTGAACAGTATCAGGGCATAGATGTGAAGCATTCGGCGATGGCGGGGGCGTCGGAGACGGTATTGCAAGGGCTGGTTCCAGGGATGGACATGAACAGCTATGGAAATTTGGAGAAGAAGAAGCGGCTGAGCAGCGAGCAGCTCGACTCACTCGAACAAAGCTTCCAGGAGGAGATCAAGCTCGATCCCGACCGGAAGCAGAAGCTGGCCAAGGAGCTTGGTCTGCAGCCGCGCCAGATCGCCGTTTGGTTCCAGAACCGCCGTGCGCGGTGGAAGGCGAAGCAACTCGAGCACCTCTACGACACTCTCAAACAAGAGTTCGATGCCATTTCTAGAGAGAAACATAAGCTTCAAGAGGAGGAGACGGTGGAGAGCACCTCGGTCGGAGCTGGCTGCTCGAGCAAGCCGAGTGCGGCGGCGGTGGCGGCAGCAGCAGCAAATCAATACCCGACGCCACCGGAGCAGTGCAACTATGTGTTCAACACTGAGGAGTACAACCCCATGTCTCCAACATTCTGGGGGACACTCCCATCGTCTTATCATCCTCAG

Coding sequence (CDS)

ATGGAGTGGGCCACCGGAAGTTTCAGACCCTTTGTTTCTCGAGCGCCGGAATCTTCATTTGGGTTTCTCTATAACTATAATCTTGAACAGTATCAGGGCATAGATGTGAAGCATTCGGCGATGGCGGGGGCGTCGGAGACGGTATTGCAAGGGCTGGTTCCAGGGATGGACATGAACAGCTATGGAAATTTGGAGAAGAAGAAGCGGCTGAGCAGCGAGCAGCTCGACTCACTCGAACAAAGCTTCCAGGAGGAGATCAAGCTCGATCCCGACCGGAAGCAGAAGCTGGCCAAGGAGCTTGGTCTGCAGCCGCGCCAGATCGCCGTTTGGTTCCAGAACCGCCGTGCGCGGTGGAAGGCGAAGCAACTCGAGCACCTCTACGACACTCTCAAACAAGAGTTCGATGCCATTTCTAGAGAGAAACATAAGCTTCAAGAGGAGGAGACGGTGGAGAGCACCTCGGTCGGAGCTGGCTGCTCGAGCAAGCCGAGTGCGGCGGCGGTGGCGGCAGCAGCAGCAAATCAATACCCGACGCCACCGGAGCAGTGCAACTATGTGTTCAACACTGAGGAGTACAACCCCATGTCTCCAACATTCTGGGGGACACTCCCATCGTCTTATCATCCTCAG

Protein sequence

MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNSYGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEETVESTSVGAGCSSKPSAAAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ

Homology

[Close]

BLAST of Cp4.1LG08g10530 vs. ExPASy Swiss-Prot
Match: Q9LZR0 (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana OX=3702 GN=ATHB-51 PE=2 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 2.3e-31
Identity = 88/162 (54.32%), Postives = 108/162 (66.67%), Query Frame = 0


Query: 1   MEWATGSFRPFVSRA------PE-SSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLV 60
           MEW+T S    V  A      PE SSF  L+++N + Y G    +S   G ++T     V
Sbjct: 1   MEWSTTSNVENVRVAFMPPPWPESSSFNSLHSFNFDPYAG----NSYTPGDTQTGPVISV 60

Query: 61  PGMD--MNSY------GNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPR 120
           P  +  MN+Y        + KKKRL+S QL SLE+SFQEEIKLD DRK KL++ELGLQPR
Sbjct: 61  PESEKIMNAYRFPNNNNEMIKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPR 120

Query: 121 QIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEE 148
           QIAVWFQNRRARWKAKQLE LYD+L+QE+D +SREK  L +E
Sbjct: 121 QIAVWFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQMLHDE 158

[Close]

BLAST of Cp4.1LG08g10530 vs. ExPASy Swiss-Prot
Match: Q4PSR7 (Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana OX=3702 GN=ATHB-22 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.1e-29
Identity = 82/156 (52.56%), Postives = 102/156 (65.38%), Query Frame = 0


Query: 11  FVSRAPESSFGFLYNYNLEQYQGIDVKH--SAMAGASETVLQGLVP--------GMDMNS 70
           F+  A  SSF   + YN + + G         M GA + +L   VP        G + NS
Sbjct: 8   FIDGASSSSFISPF-YNFDHFSGNQDNRCLGTMMGAQQDILH--VPLAMVESGYGEESNS 67

Query: 71  Y-GNLEKKKRLSSEQLDSLEQSFQEEI--------KLDPDRKQKLAKELGLQPRQIAVWF 130
           + G  +KKK+++SEQL  LE+SFQEEI        KL+PDRK KL+KELGLQPRQIAVWF
Sbjct: 68  FNGQEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWF 127

Query: 131 QNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEE 148
           QNR+ARWK KQLEHLY++L+QEFD +SREK  LQEE
Sbjct: 128 QNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEE 160

[Close]

BLAST of Cp4.1LG08g10530 vs. ExPASy Swiss-Prot
Match: P46667 (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana OX=3702 GN=ATHB-5 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.1e-21
Identity = 50/83 (60.24%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 65  EKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKAKQLE 124
           EKK+RL  EQ+ +LE++F+ + KL+P+RK KLA+ELGLQPRQ+A+WFQNRRARWK KQLE
Sbjct: 71  EKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLE 130

Query: 125 HLYDTLKQEFDAISREKHKLQEE 148
             Y  LK  FDA+ R +  LQ +
Sbjct: 131 RDYGVLKSNFDALKRNRDSLQRD 153

[Close]

BLAST of Cp4.1LG08g10530 vs. ExPASy Swiss-Prot
Match: Q9XH36 (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica OX=39946 GN=HOX5 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-20
Identity = 55/114 (48.25%), Postives = 78/114 (68.42%), Query Frame = 0


Query: 65  EKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKAKQLE 124
           EKK+RL++EQ+  LE+SF+EE KL+P+RK +LA+ LG+ PRQ+AVWFQNRRARWK KQLE
Sbjct: 85  EKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLE 144

Query: 125 HLYDTLKQEFDAISREKHKLQEE------ETVESTSVGAGCSSKPSAAAVAAAA 173
           H +D LK  +DA++ + H L  +      + +  T       + PS+A +  AA
Sbjct: 145 HDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEKLQDKETSPSSATITTAA 198

[Close]

BLAST of Cp4.1LG08g10530 vs. ExPASy Swiss-Prot
Match: Q6ZA74 (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX5 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-20
Identity = 55/114 (48.25%), Postives = 78/114 (68.42%), Query Frame = 0


Query: 65  EKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKAKQLE 124
           EKK+RL++EQ+  LE+SF+EE KL+P+RK +LA+ LG+ PRQ+AVWFQNRRARWK KQLE
Sbjct: 85  EKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLE 144

Query: 125 HLYDTLKQEFDAISREKHKLQEE------ETVESTSVGAGCSSKPSAAAVAAAA 173
           H +D LK  +DA++ + H L  +      + +  T       + PS+A +  AA
Sbjct: 145 HDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEKLQDKETSPSSATITTAA 198

[Close]

BLAST of Cp4.1LG08g10530 vs. NCBI nr
Match: XP_023540702.1 (homeobox-leucine zipper protein ATHB-22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398 bits (1023), Expect = 4.38e-139
Identity = 210/238 (88.24%), Postives = 210/238 (88.24%), Query Frame = 0


Query: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS 60
           MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS 60

Query: 61  YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA 120
           YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEE----------------------------ETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEE                            ETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQTARNQVSTVYTELSGEETVES 180

Query: 181 TSVGAGCSSKPSAAAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ 210
           TSVGAGCSSKPSAAAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ
Sbjct: 181 TSVGAGCSSKPSAAAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ 238

[Close]

BLAST of Cp4.1LG08g10530 vs. NCBI nr
Match: XP_022944654.1 (homeobox-leucine zipper protein ATHB-22-like [Cucurbita moschata])

HSP 1 Score: 397 bits (1020), Expect = 1.25e-138
Identity = 209/238 (87.82%), Postives = 210/238 (88.24%), Query Frame = 0


Query: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS 60
           MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQG+DVKHSAMAGASETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGMDVKHSAMAGASETVLQGLVPGMDMNS 60

Query: 61  YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA 120
           YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEE----------------------------ETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEE                            ETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQTARNQVSTVYTELSGEETVES 180

Query: 181 TSVGAGCSSKPSAAAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ 210
           TSVGAGCSSKPSAAAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ
Sbjct: 181 TSVGAGCSSKPSAAAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ 238

[Close]

BLAST of Cp4.1LG08g10530 vs. NCBI nr
Match: KAG6596528.1 (putative homeobox-leucine zipper protein ATHB-51, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028062.1 putative homeobox-leucine zipper protein ATHB-51, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 397 bits (1019), Expect = 1.78e-138
Identity = 209/238 (87.82%), Postives = 209/238 (87.82%), Query Frame = 0


Query: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS 60
           MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS 60

Query: 61  YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA 120
           YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEE----------------------------ETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEE                            ETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQTARNQVSTVYTELSGEETVES 180

Query: 181 TSVGAGCSSKPSAAAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ 210
           TSVGAGCSSKPS AAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ
Sbjct: 181 TSVGAGCSSKPSGAAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ 238

[Close]

BLAST of Cp4.1LG08g10530 vs. NCBI nr
Match: XP_023005743.1 (homeobox-leucine zipper protein ATHB-22-like [Cucurbita maxima])

HSP 1 Score: 396 bits (1018), Expect = 2.53e-138
Identity = 209/238 (87.82%), Postives = 209/238 (87.82%), Query Frame = 0


Query: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS 60
           MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS 60

Query: 61  YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA 120
           YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEE----------------------------ETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEE                            ETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQTARNQVSTVYTELSGEETVES 180

Query: 181 TSVGAGCSSKPSAAAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ 210
           TSVGAGCSSKPSAAAVA AAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ
Sbjct: 181 TSVGAGCSSKPSAAAVAEAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ 238

[Close]

BLAST of Cp4.1LG08g10530 vs. NCBI nr
Match: KAG6580652.1 (putative homeobox-leucine zipper protein ATHB-51, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 374 bits (959), Expect = 2.57e-129
Identity = 197/239 (82.43%), Postives = 205/239 (85.77%), Query Frame = 0


Query: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS 60
           MEWATGSFRPF+SR PESSFGFLYNYNLEQYQGIDVKHSAMAG SETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60

Query: 61  YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA 120
           YGNL+KKKRLSSEQL+SLE+SFQEEIKLDP+RKQKL+KELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEE----------------------------ETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEE                            ETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES 180

Query: 181 TSVGAGCSSKPSA-AAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ 210
           TSVGAGCSSKP A AA AAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWG+LP +YHPQ
Sbjct: 181 TSVGAGCSSKPRAVAAAAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ 239

[Close]

BLAST of Cp4.1LG08g10530 vs. ExPASy TrEMBL
Match: A0A6J1FX30 (homeobox-leucine zipper protein ATHB-22-like OS=Cucurbita moschata OX=3662 GN=LOC111449045 PE=4 SV=1)

HSP 1 Score: 397 bits (1020), Expect = 6.07e-139
Identity = 209/238 (87.82%), Postives = 210/238 (88.24%), Query Frame = 0


Query: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS 60
           MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQG+DVKHSAMAGASETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGMDVKHSAMAGASETVLQGLVPGMDMNS 60

Query: 61  YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA 120
           YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEE----------------------------ETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEE                            ETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQTARNQVSTVYTELSGEETVES 180

Query: 181 TSVGAGCSSKPSAAAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ 210
           TSVGAGCSSKPSAAAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ
Sbjct: 181 TSVGAGCSSKPSAAAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ 238

[Close]

BLAST of Cp4.1LG08g10530 vs. ExPASy TrEMBL
Match: A0A6J1L311 (homeobox-leucine zipper protein ATHB-22-like OS=Cucurbita maxima OX=3661 GN=LOC111498652 PE=4 SV=1)

HSP 1 Score: 396 bits (1018), Expect = 1.23e-138
Identity = 209/238 (87.82%), Postives = 209/238 (87.82%), Query Frame = 0


Query: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS 60
           MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS 60

Query: 61  YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA 120
           YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEE----------------------------ETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEE                            ETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQTARNQVSTVYTELSGEETVES 180

Query: 181 TSVGAGCSSKPSAAAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ 210
           TSVGAGCSSKPSAAAVA AAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ
Sbjct: 181 TSVGAGCSSKPSAAAVAEAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ 238

[Close]

BLAST of Cp4.1LG08g10530 vs. ExPASy TrEMBL
Match: A0A0A0LED8 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G748220 PE=4 SV=1)

HSP 1 Score: 374 bits (959), Expect = 1.29e-129
Identity = 198/240 (82.50%), Postives = 204/240 (85.00%), Query Frame = 0


Query: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS 60
           MEWATGSFRPFVSRAPESSFGFLYNYNLEQ+QG+DVKHSAMAGASETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQFQGVDVKHSAMAGASETVLQGLVPGMDMNS 60

Query: 61  YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA 120
           YGNLEKKKRLSSEQL+SLE+SFQEEIKLDPDRKQKL+KELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLEKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEE----------------------------ETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEE                            ETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQAARNQVSTVYTDLSGEETVES 180

Query: 181 TSVGAGCSSKPS--AAAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ 210
           TSVGAGCSSKP   AAA A AAAN Y TPPEQCNYVFNTEEYNPMSP FWG+LPSSYHPQ
Sbjct: 181 TSVGAGCSSKPRPVAAAAAVAAANHYTTPPEQCNYVFNTEEYNPMSPAFWGSLPSSYHPQ 240

[Close]

BLAST of Cp4.1LG08g10530 vs. ExPASy TrEMBL
Match: A0A1S3B777 (homeobox-leucine zipper protein ATHB-22-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486558 PE=4 SV=1)

HSP 1 Score: 374 bits (959), Expect = 1.29e-129
Identity = 198/240 (82.50%), Postives = 204/240 (85.00%), Query Frame = 0


Query: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS 60
           MEWATGSFRPFVSRAPESSFGFLYNYNLEQ+QG+DVKHSAMAGASETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQFQGVDVKHSAMAGASETVLQGLVPGMDMNS 60

Query: 61  YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA 120
           YGNLEKKKRLSSEQL+SLE+SFQEEIKLDPDRKQKL+KELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLEKKKRLSSEQLESLERSFQEEIKLDPDRKQKLSKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEE----------------------------ETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEE                            ETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQAARNQVSTVYTDLSGEETVES 180

Query: 181 TSVGAGCSSKPS--AAAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSYHPQ 210
           TSVGAGCSSKP   AAA A AAAN Y TPPEQCNYVFNTEEYNPMSP FWG+LPSSYHPQ
Sbjct: 181 TSVGAGCSSKPRPVAAAAAVAAANHYTTPPEQCNYVFNTEEYNPMSPAFWGSLPSSYHPQ 240

[Close]

BLAST of Cp4.1LG08g10530 vs. ExPASy TrEMBL
Match: A0A6J1J4Q7 (homeobox-leucine zipper protein ATHB-22-like OS=Cucurbita maxima OX=3661 GN=LOC111481737 PE=4 SV=1)

HSP 1 Score: 373 bits (957), Expect = 2.89e-129
Identity = 197/243 (81.07%), Postives = 206/243 (84.77%), Query Frame = 0


Query: 1   MEWATGSFRPFVSRAPESSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLVPGMDMNS 60
           MEWATGSFRPF+SR PESSFGFLYNYNLEQYQGIDVKHSAMAG SETVLQGLVPGMDMNS
Sbjct: 1   MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNS 60

Query: 61  YGNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKA 120
           YGNL+KKKRLSSEQL+SLE+SFQEEIKLDP+RKQKL+KELGLQPRQIAVWFQNRRARWKA
Sbjct: 61  YGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKA 120

Query: 121 KQLEHLYDTLKQEFDAISREKHKLQEE----------------------------ETVES 180
           KQLEHLYDTLKQEFDAISREKHKLQEE                            ETVES
Sbjct: 121 KQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVES 180

Query: 181 TSVGAGCSSKP-----SAAAVAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGTLPSSY 210
           TSVGAGCSSKP     +AAA AAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWG+LP +Y
Sbjct: 181 TSVGAGCSSKPRAVATAAAAAAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTY 240

[Close]

BLAST of Cp4.1LG08g10530 vs. TAIR 10
Match: AT5G03790.1 (homeobox 51 )

HSP 1 Score: 137.1 bits (344), Expect = 1.6e-32
Identity = 88/162 (54.32%), Postives = 108/162 (66.67%), Query Frame = 0


Query: 1   MEWATGSFRPFVSRA------PE-SSFGFLYNYNLEQYQGIDVKHSAMAGASETVLQGLV 60
           MEW+T S    V  A      PE SSF  L+++N + Y G    +S   G ++T     V
Sbjct: 1   MEWSTTSNVENVRVAFMPPPWPESSSFNSLHSFNFDPYAG----NSYTPGDTQTGPVISV 60

Query: 61  PGMD--MNSY------GNLEKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPR 120
           P  +  MN+Y        + KKKRL+S QL SLE+SFQEEIKLD DRK KL++ELGLQPR
Sbjct: 61  PESEKIMNAYRFPNNNNEMIKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPR 120

Query: 121 QIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEE 148
           QIAVWFQNRRARWKAKQLE LYD+L+QE+D +SREK  L +E
Sbjct: 121 QIAVWFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQMLHDE 158

[Close]

BLAST of Cp4.1LG08g10530 vs. TAIR 10
Match: AT2G36610.1 (homeobox protein 22 )

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-30
Identity = 82/156 (52.56%), Postives = 102/156 (65.38%), Query Frame = 0


Query: 11  FVSRAPESSFGFLYNYNLEQYQGIDVKH--SAMAGASETVLQGLVP--------GMDMNS 70
           F+  A  SSF   + YN + + G         M GA + +L   VP        G + NS
Sbjct: 8   FIDGASSSSFISPF-YNFDHFSGNQDNRCLGTMMGAQQDILH--VPLAMVESGYGEESNS 67

Query: 71  Y-GNLEKKKRLSSEQLDSLEQSFQEEI--------KLDPDRKQKLAKELGLQPRQIAVWF 130
           + G  +KKK+++SEQL  LE+SFQEEI        KL+PDRK KL+KELGLQPRQIAVWF
Sbjct: 68  FNGQEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWF 127

Query: 131 QNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEE 148
           QNR+ARWK KQLEHLY++L+QEFD +SREK  LQEE
Sbjct: 128 QNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEE 160

[Close]

BLAST of Cp4.1LG08g10530 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 )

HSP 1 Score: 102.1 bits (253), Expect = 5.7e-22
Identity = 50/83 (60.24%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 65  EKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKAKQLE 124
           EKK+RL  EQ+ +LE++F+ + KL+P+RK KLA+ELGLQPRQ+A+WFQNRRARWK KQLE
Sbjct: 71  EKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLE 130

Query: 125 HLYDTLKQEFDAISREKHKLQEE 148
             Y  LK  FDA+ R +  LQ +
Sbjct: 131 RDYGVLKSNFDALKRNRDSLQRD 153

[Close]

BLAST of Cp4.1LG08g10530 vs. TAIR 10
Match: AT5G65310.2 (homeobox protein 5 )

HSP 1 Score: 102.1 bits (253), Expect = 5.7e-22
Identity = 50/83 (60.24%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 65  EKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKAKQLE 124
           EKK+RL  EQ+ +LE++F+ + KL+P+RK KLA+ELGLQPRQ+A+WFQNRRARWK KQLE
Sbjct: 53  EKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLE 112

Query: 125 HLYDTLKQEFDAISREKHKLQEE 148
             Y  LK  FDA+ R +  LQ +
Sbjct: 113 RDYGVLKSNFDALKRNRDSLQRD 135

[Close]

BLAST of Cp4.1LG08g10530 vs. TAIR 10
Match: AT1G69780.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-21
Identity = 50/81 (61.73%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 65  EKKKRLSSEQLDSLEQSFQEEIKLDPDRKQKLAKELGLQPRQIAVWFQNRRARWKAKQLE 124
           EKK+RL+ EQ+ +LE++F+   KL+P+RK +LA+ LGLQPRQIA+WFQNRRARWK KQLE
Sbjct: 84  EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLE 143

Query: 125 HLYDTLKQEFDAISREKHKLQ 146
             YDTLK++FD +  E   LQ
Sbjct: 144 KDYDTLKRQFDTLKAENDLLQ 164

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g10530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZR0	2.3e-31	54.32	Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana OX=3702...	[more]
Q4PSR7	2.1e-29	52.56	Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
P46667	8.1e-21	60.24	Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana OX=3702 GN=ATHB-5...	[more]
Q9XH36	1.1e-20	48.25	Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica OX=39946 GN=H...	[more]
Q6ZA74	1.1e-20	48.25	Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of Cp4.1LG08g10530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540702.1	4.38e-139	88.24	homeobox-leucine zipper protein ATHB-22-like [Cucurbita pepo subsp. pepo]	[more]
XP_022944654.1	1.25e-138	87.82	homeobox-leucine zipper protein ATHB-22-like [Cucurbita moschata]	[more]
KAG6596528.1	1.78e-138	87.82	putative homeobox-leucine zipper protein ATHB-51, partial [Cucurbita argyrosperm...	[more]
XP_023005743.1	2.53e-138	87.82	homeobox-leucine zipper protein ATHB-22-like [Cucurbita maxima]	[more]
KAG6580652.1	2.57e-129	82.43	putative homeobox-leucine zipper protein ATHB-51, partial [Cucurbita argyrosperm...	[more]

BLAST of Cp4.1LG08g10530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FX30	6.07e-139	87.82	homeobox-leucine zipper protein ATHB-22-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1L311	1.23e-138	87.82	homeobox-leucine zipper protein ATHB-22-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A0A0LED8	1.29e-129	82.50	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G748220 PE...	[more]
A0A1S3B777	1.29e-129	82.50	homeobox-leucine zipper protein ATHB-22-like isoform X2 OS=Cucumis melo OX=3656 ...	[more]
A0A6J1J4Q7	2.89e-129	81.07	homeobox-leucine zipper protein ATHB-22-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of Cp4.1LG08g10530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03790.1	1.6e-32	54.32	homeobox 51	[more]
AT2G36610.1	1.5e-30	52.56	homeobox protein 22	[more]
AT5G65310.1	5.7e-22	60.24	homeobox protein 5	[more]
AT5G65310.2	5.7e-22	60.24	homeobox protein 5	[more]
AT1G69780.1	1.3e-21	61.73	Homeobox-leucine zipper protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 113..147
None	No IPR available	COILS	Coil	Coil	coord: 61..81
None	No IPR available	GENE3D	1.10.10.60		coord: 59..128 e-value: 8.8E-21 score: 75.2
None	No IPR available	PANTHER	PTHR24326:SF593	HOMEODOMAIN-LIKE PROTEIN-RELATED	coord: 1..163
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 1..163
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 92..101 score: 48.74 coord: 101..117 score: 55.68
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 63..125 e-value: 3.4E-18 score: 76.5
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 66..119 e-value: 1.2E-17 score: 63.5
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 61..121 score: 17.345591
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 66..122 e-value: 1.03911E-17 score: 71.8908
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 96..119
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 55..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g10530.1	Cp4.1LG08g10530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding