Cp4.1LG08g10350 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g10350
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	trihelix transcription factor PTL-like
Location	Cp4.1LG08: 7959995 .. 7963252 (+)
RNA-Seq Expression	Cp4.1LG08g10350
Synteny	Cp4.1LG08g10350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTGACATCAAAAGTTGAAGAGCTTGAGAGATTAATAGCATAGCATTAGATGAAGAGAACATATGGATATGGGTCCATCTCCCTGACTCCGACTGCGTGTAAAATCTAGCTTTTTCGTGGACGACACGATCCGAGTCTACCGCTACTCTCTCCCTTTTCCCTTTTATCTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCGTCCTCGTCCTCTCCTGGAAATGGATGATCAATATTCCCTTTCCGATCTCCGCCACCTCATCACTGCCCCGCCTCGCTCTCATTTCCCTTCTTCCTCAATTCCCCACCACGATCTTGCTTCTACCGCCTTTCGCCACCACCATACCCCCTATGATCTCATTCGCTCTCAACCCACCGCCGTTCTTGGTTCCGCTTCCCCTACTAGCTTCGATGCTCAAACCACCACTGCTCGGTGGCCTCGCCAAGAGACTCTCACTCTCTTGGATGTCAGATCTCGCCTCGATTCTAAGTTTAAAGAAGCTAACCAAAAAGGACCCCTTTGGGATGAAGTTTCTAGGTATCTATCTATTTATGTTTTTTTTTTTCTGGGTTGAGTGAATTAAACCTCGTTATTTTAAAAAAAACATGATTTATGAACAAGTTCCAGAATTCAAGATTGGGTTTTTTTTTATTTTTTTTTTATTAATTTTGAAAATGACCATACACTCTACATGAATTCAGCTGCTTTCTTGCTTAATTTTGTCTTGGAATCTACTTTTTAGAAAGAAGTGAGAGATGAGAGAAAGGAATTATGACAATATCTTTATTTTTAGTCCAAAATTTTGAAAATTTTGTGTTTTTTTTTCTTCAAAAGTAACTTTTCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAANTTTTAATGCTTCAAGAACATTGTTAAGAAAAATACCCCAAAAATAAAATTACCCAATTTTCTAAACTCAAAATTAATGAAAAATTTCGTCTTGTTCGTTGATTAAACGCAAAAAGATGATGAATTTGTAACAATTTTGGTATAAATCTATAATCTTTGAATGTTATTTTGAAATCTAGGGCTTTTTTCGTGGAAATTAATGAAATTATTATTATTATTATTTTTTCAGAATTATGGGTGAGGAACACAATTATCAAAGAAGTGGAAAGAAATGCAGAGAAAAGTTTGAGAATTTATATAAATATTACAAAAAAACAAAGGATGGCAAAGCTGGACGACAAGATGGCAAAAACTACAGATTCTTCAGGCAGCTTGAAGCTCTCTATGGTGAAACCAGCAATGCCACTTCACTTCCAGACTCCCATTTTGTTGGAGATGGCAACCTTATGTTCCAATAAGATGGGACTAATAATCCAACCTCCGGTCACATGAGCTATGATGCTCAGCTGAAGCACTACTGTGACAGTCTCAGCTTCTCGAACACGTCCGAGTTTGAAACCTCGGCGTCGTCTGATGGTAACGATGAGTTTGGTTCGGTCAATGATTCGGTGGAGAAGAGGAAGAGGCGAGCTGGGAAATGCTGGAAGGTGAAGATCAAGCAGTTCATTGACTTGCAAATGAGGAAGCTAATTGATAAGCAAGAGGCTGGGTTGGAGAAGCTCATGAAGACTCTTGAACAAAAGGAGAAGGAAAGAATGGTATGGTTCATCATTGCCTTCAACTTAAATTTTTAATCTCCGATAATCATGAGAGATGATATAACGGTCAAAGCCTACCGCTAGCAGATCTTATCCTATTTGAGTTTTTTCTTTCGAGTCTCCCCTCGTGTTCGGGAGAGGTTTCCACACCCTTATAAAGTGTGATCTCACAATCTACCCGCTTTCGGGGCTCAGCATCCTCGCTGGCACACGCCCAGTCTCCACCCTCTAATACCAACTATAACGAGTCAATCCCACCACTAGTAGATATTGTCTTCTCTGGAGTTTCCCCTTTCGGGCTTCCCCTCAAGGTTTTTAAAACGTGTCTGCTAGGGGGAGATCGTCACACCCTTATAAAAAATGTTTCGTTTTCCTCTTCAACTGACGTGGGATCTCACAATCTACCTCCTTTCGAGTCCCAGTATCCTTATTAGCATACCGTCTAATGTCTGGCTATGATACCATTTGTAACAGCTCAAACTCACCACTAGCATATATTATCCTCTCTGAAATTTCCCTTCAAGGTTTTTAAAGGAAGAAGTTTTCACACCCTTATAAATAATGTTTCGTTCTCCTTTCCAACCGATTTGAGATCTCACATATTACGAAAGTGATATTGAGATGATCGTATCTTAACTAAGTGGTATCAGAGTCATATCTTTGAACAAAGAAGTAAACTCTGAAGGTCTAGTCATTAGAGATGTCTATTTAACCTACATGACCAATTCTCGTGAAGAATTTCGTGGACATCTGTAGCATCGATATCATAAATACTAATAGATTCTCGTATCGATGATTCATCCGGGGTTGTTCGGTCGGTTTTCAGGTATGGGAAGAGGAATGGAGGAAACAAGAAGTGTCAAGAATTGAGAGAGAAAGAAGCTTTTGGGCAAAGGAGAGAGCATGGATAGAAGCTAGAGATGCAGCGTTAATGGAGGCATTACAAAAGCTAACAGGCAAAGAGTTAATCACAGCGGAGCCTCATCAAAATGAAGATGGTAGTGAGATACTCAACAATTACCAAACAAAAACAATGGATCAAACCAACAAGAAACGCAAGGACAATTCAAGATCACCCACCACAACCTACAATCTTTACTTCCAAACTGATTCCTCCGTCTACGGCGGCGGTGGTCGTGGCGCCGAGATGAAAGAACAAAGTCCGAACAGCTCGAACGCCGGGGGCAGTGGCGGTGGCAGCCAAGTGGTGCAAGATAGCTGCTTTTTCTTGATGGGTGAAGGAGATCAATCTCAATCTGGTTTGTGGGAGAATTTTGGACTCAAACTCAACAATGGAAGCCATCAAACTTGAAACACTTCGATCTAGCTTATCTAGCCTCGGTTGTAGCAGGGAACGAATCATTCCTTATAAAGACGTAGAAATCTCTTTATATAGAAACCTCTCATTAGCAGACACATTTAAAATTGTGATCATGACGGCTATGCATAACAGATCAAAGTGGACAATATCGGTTAACACGTGTCTGCATGGTCAAATTTTGCTGCCATTTATGTGTTTTTTAATTTATTCCTAATTTTCTATCTTAAAACTCTAAATATTATTAAATACTGTAATTTTTTTCATTTACTTTATCATATTATCATACGTTTAGAATTGATTT

mRNA sequence

TGTTGACATCAAAAGTTGAAGAGCTTGAGAGATTAATAGCATAGCATTAGATGAAGAGAACATATGGATATGGGTCCATCTCCCTGACTCCGACTGCGTGTAAAATCTAGCTTTTTCGTGGACGACACGATCCGAGTCTACCGCTACTCTCTCCCTTTTCCCTTTTATCTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCGTCCTCGTCCTCTCCTGGAAATGGATGATCAATATTCCCTTTCCGATCTCCGCCACCTCATCACTGCCCCGCCTCGCTCTCATTTCCCTTCTTCCTCAATTCCCCACCACGATCTTGCTTCTACCGCCTTTCGCCACCACCATACCCCCTATGATCTCATTCGCTCTCAACCCACCGCCGTTCTTGGTTCCGCTTCCCCTACTAGCTTCGATGCTCAAACCACCACTGCTCGGTGGCCTCGCCAAGAGACTCTCACTCTCTTGGATGTCAGATCTCGCCTCGATTCTAAGTTTAAAGAAGCTAACCAAAAAGGACCCCTTTGGGATGAAGTTTCTAGTCTCAGCTTCTCGAACACGTCCGAGTTTGAAACCTCGGCGTCGTCTGATGGTAACGATGAGTTTGGTTCGGTCAATGATTCGGTGGAGAAGAGGAAGAGGCGAGCTGGGAAATGCTGGAAGGTGAAGATCAAGCAGTTCATTGACTTGCAAATGAGGAAGCTAATTGATAAGCAAGAGGCTGGGTTGGAGAAGCTCATGAAGACTCTTGAACAAAAGGAGAAGGAAAGAATGGTATGGGAAGAGGAATGGAGGAAACAAGAAGTGTCAAGAATTGAGAGAGAAAGAAGCTTTTGGGCAAAGGAGAGAGCATGGATAGAAGCTAGAGATGCAGCGTTAATGGAGGCATTACAAAAGCTAACAGGCAAAGAGTTAATCACAGCGGAGCCTCATCAAAATGAAGATGGTAGTGAGATACTCAACAATTACCAAACAAAAACAATGGATCAAACCAACAAGAAACGCAAGGACAATTCAAGATCACCCACCACAACCTACAATCTTTACTTCCAAACTGATTCCTCCGTCTACGGCGGCGGTGGTCGTGGCGCCGAGATGAAAGAACAAAGTCCGAACAGCTCGAACGCCGGGGGCAGTGGCGGTGGCAGCCAAGTGGTGCAAGATAGCTGCTTTTTCTTGATGGGTGAAGGAGATCAATCTCAATCTGGTTTGTGGGAGAATTTTGGACTCAAACTCAACAATGGAAGCCATCAAACTTGAAACACTTCGATCTAGCTTATCTAGCCTCGGTTGTAGCAGGGAACGAATCATTCCTTATAAAGACGTAGAAATCTCTTTATATAGAAACCTCTCATTAGCAGACACATTTAAAATTGTGATCATGACGGCTATGCATAACAGATCAAAGTGGACAATATCGGTTAACACGTGTCTGCATGGTCAAATTTTGCTGCCATTTATGTGTTTTTTAATTTATTCCTAATTTTCTATCTTAAAACTCTAAATATTATTAAATACTGTAATTTTTTTCATTTACTTTATCATATTATCATACGTTTAGAATTGATTT

Coding sequence (CDS)

ATGGATGATCAATATTCCCTTTCCGATCTCCGCCACCTCATCACTGCCCCGCCTCGCTCTCATTTCCCTTCTTCCTCAATTCCCCACCACGATCTTGCTTCTACCGCCTTTCGCCACCACCATACCCCCTATGATCTCATTCGCTCTCAACCCACCGCCGTTCTTGGTTCCGCTTCCCCTACTAGCTTCGATGCTCAAACCACCACTGCTCGGTGGCCTCGCCAAGAGACTCTCACTCTCTTGGATGTCAGATCTCGCCTCGATTCTAAGTTTAAAGAAGCTAACCAAAAAGGACCCCTTTGGGATGAAGTTTCTAGTCTCAGCTTCTCGAACACGTCCGAGTTTGAAACCTCGGCGTCGTCTGATGGTAACGATGAGTTTGGTTCGGTCAATGATTCGGTGGAGAAGAGGAAGAGGCGAGCTGGGAAATGCTGGAAGGTGAAGATCAAGCAGTTCATTGACTTGCAAATGAGGAAGCTAATTGATAAGCAAGAGGCTGGGTTGGAGAAGCTCATGAAGACTCTTGAACAAAAGGAGAAGGAAAGAATGGTATGGGAAGAGGAATGGAGGAAACAAGAAGTGTCAAGAATTGAGAGAGAAAGAAGCTTTTGGGCAAAGGAGAGAGCATGGATAGAAGCTAGAGATGCAGCGTTAATGGAGGCATTACAAAAGCTAACAGGCAAAGAGTTAATCACAGCGGAGCCTCATCAAAATGAAGATGGTAGTGAGATACTCAACAATTACCAAACAAAAACAATGGATCAAACCAACAAGAAACGCAAGGACAATTCAAGATCACCCACCACAACCTACAATCTTTACTTCCAAACTGATTCCTCCGTCTACGGCGGCGGTGGTCGTGGCGCCGAGATGAAAGAACAAAGTCCGAACAGCTCGAACGCCGGGGGCAGTGGCGGTGGCAGCCAAGTGGTGCAAGATAGCTGCTTTTTCTTGATGGGTGAAGGAGATCAATCTCAATCTGGTTTGTGGGAGAATTTTGGACTCAAACTCAACAATGGAAGCCATCAAACTTGA

Protein sequence

MDDQYSLSDLRHLITAPPRSHFPSSSIPHHDLASTAFRHHHTPYDLIRSQPTAVLGSASPTSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVSSLSFSNTSEFETSASSDGNDEFGSVNDSVEKRKRRAGKCWKVKIKQFIDLQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERERSFWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQTKTMDQTNKKRKDNSRSPTTTYNLYFQTDSSVYGGGGRGAEMKEQSPNSSNAGGSGGGSQVVQDSCFFLMGEGDQSQSGLWENFGLKLNNGSHQT

Homology

[Close]

BLAST of Cp4.1LG08g10350 vs. ExPASy Swiss-Prot
Match: Q9LZS0 (Trihelix transcription factor PTL OS=Arabidopsis thaliana OX=3702 GN=PTL PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.5e-32
Identity = 117/325 (36.00%), Postives = 149/325 (45.85%), Query Frame = 0


Query: 69  TARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVS----------------------- 128
           T RWPRQETLTLL++RSRLD KFKEANQKGPLWDEVS                       
Sbjct: 117 TGRWPRQETLTLLEIRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENL 176

Query: 129 ------------------------------------------------------------ 188
                                                                       
Sbjct: 177 YKYYRKTKEGKAGRQDGKHYRFFRQLEALYGDSNNLVSCPNHNTQFMSSALHGFHTQNPM 236

Query: 189 --------------------SLSFS---NTSEFETSASSDGNDEFGSVNDSVEKRKRRAG 248
                               SLS S   N+SE E   SS         NDS  +RK+R+ 
Sbjct: 237 NVTTTTSNIHNVDSVHGFHQSLSLSNNYNSSELELMTSSSEG------NDSSSRRKKRS- 296

Query: 249 KCWKVKIKQFIDLQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERERS 284
             WK KIK+FID  M++LI++Q+  LEKL K +E KE++RM+ EEEWRK E +RI++E  
Sbjct: 297 --WKAKIKEFIDTNMKRLIERQDVWLEKLTKVIEDKEEQRMMKEEEWRKIEAARIDKEHL 356

[Close]

BLAST of Cp4.1LG08g10350 vs. ExPASy Swiss-Prot
Match: Q9C6K3 (Trihelix transcription factor DF1 OS=Arabidopsis thaliana OX=3702 GN=DF1 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.1e-10
Identity = 55/152 (36.18%), Postives = 86/152 (56.58%), Query Frame = 0


Query: 102 DEVSSLSFSNTSEFETSASSDGNDEFGSVNDSVEKRKRRAGKCWKVKIKQFIDLQMRKLI 161
           D +S  S S++S + TS+  +     G    + +KRKR+    WKV    F +  M++++
Sbjct: 218 DFLSDNSTSSSSSYSTSSDMEMG---GGTATTRKKRKRK----WKV----FFERLMKQVV 277

Query: 162 DKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERERSFWAKERAWIEARDAALMEA 221
           DKQE    K ++ +E++E ER+V EE WR QE++RI RE    A+ER+   A+DAA+M  
Sbjct: 278 DKQEELQRKFLEAVEKREHERLVREESWRVQEIARINREHEILAQERSMSAAKDAAVMAF 337

Query: 222 LQKLTGKE----LITAEPHQNEDGSEILNNYQ 250
           LQKL+ K+        +P Q     ++ NN Q
Sbjct: 338 LQKLSEKQPNQPQPQPQPQQVRPSMQLNNNNQ 358

[Close]

BLAST of Cp4.1LG08g10350 vs. ExPASy Swiss-Prot
Match: Q9C882 (Trihelix transcription factor GTL1 OS=Arabidopsis thaliana OX=3702 GN=GTL1 PE=1 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 3.7e-07
Identity = 38/133 (28.57%), Postives = 79/133 (59.40%), Query Frame = 0


Query: 98  GPLWDEVSSLSFSNTSEFETSASSDGND---EFGSVNDSVEKRKRRAGKCWKVKIKQFID 157
           GP++  V+  S S+++     +  D +D   +  ++  S  ++++R  +    K+ +  +
Sbjct: 212 GPIFTGVTFSSHSSSTASGMGSDDDDDDMDVDQANIAGSSSRKRKRGNRGGGGKMMELFE 271

Query: 158 LQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERERSFWAKERAWIEAR 217
             +R+++ KQ A     ++ LE++E+ER+  EE W++QE++R+ RE    ++ERA   +R
Sbjct: 272 GLVRQVMQKQAAMQRSFLEALEKREQERLDREEAWKRQEMARLAREHEVMSQERAASASR 331

Query: 218 DAALMEALQKLTG 228
           DAA++  +QK+TG
Sbjct: 332 DAAIISLIQKITG 344

[Close]

BLAST of Cp4.1LG08g10350 vs. ExPASy Swiss-Prot
Match: Q39117 (Trihelix transcription factor GT-2 OS=Arabidopsis thaliana OX=3702 GN=GT-2 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.9e-07
Identity = 66/228 (28.95%), Postives = 106/228 (46.49%), Query Frame = 0


Query: 24  SSSIPHHDLASTAFRHHH-TPYDLIRSQPTAVLGSASPTSFDAQTTTARWPRQETLTLLD 83
           SSS P  + +S+  +HHH      I + PT +    S T     T    +    T T+  
Sbjct: 161 SSSNPSTEKSSSPLKHHHQVSVQPITTNPTFLAKQPSST-----TPFPFYSSNNTTTV-- 220

Query: 84  VRSRLDSKFKEANQKGPLWDEVSSLSFSNTSEFETSASSDGNDEFGSVNDSVEKRKRRAG 143
                     +      L + VSSL+  ++S   +S +SD  ++   V  S +KRK   G
Sbjct: 221 ---------SQPPISNDLMNNVSSLNLFSSST-SSSTASDEEEDHHQVKSSRKKRKYWKG 280

Query: 144 KCWKVKIKQFIDLQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERERS 203
              K+          ++L++KQE   ++ ++TLE +EKER+  EE WR QE+ RI RE  
Sbjct: 281 LFTKL---------TKELMEKQEKMQKRFLETLEYREKERISREEAWRVQEIGRINREHE 340

Query: 204 FWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQT 251
               ER+   A+DAA++  L K++G +    +P Q+         YQ+
Sbjct: 341 TLIHERSNAAAKDAAIISFLHKISGGQ--PQQPQQHNHKPSQRKQYQS 360

[Close]

BLAST of Cp4.1LG08g10350 vs. NCBI nr
Match: XP_022952492.1 (trihelix transcription factor PTL-like [Cucurbita moschata])

HSP 1 Score: 609 bits (1571), Expect = 5.42e-217
Identity = 338/443 (76.30%), Postives = 339/443 (76.52%), Query Frame = 0


Query: 1   MDDQYSLSDLRHLITAPPRSHFPSSSIPHHDLASTAFRHHHTPYDLIRSQPTAVLGSASP 60
           MDDQYSLSDLRHLITAPPRSHFPSSSIPHHDLASTAFRHHHTPYDLIRSQPT VLGSASP
Sbjct: 1   MDDQYSLSDLRHLITAPPRSHFPSSSIPHHDLASTAFRHHHTPYDLIRSQPTTVLGSASP 60

Query: 61  TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVS--------------- 120
           TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVS               
Sbjct: 61  TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKK 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 CREKFENLYKYYKKTKDGKAGRQDGKNYRFFRQLEALYGETSNATSLPDSHFVGDGNLIF 180

Query: 181 ------------------------SLSFSNTSEFETSASSDGNDEFGSVNDSVEKRKRRA 240
                                   SLS SNTSEFETS SSDGNDEFGSVNDSVEKRKRRA
Sbjct: 181 QQDGTSNPTSGHMSYDAQLKHYCDSLSLSNTSEFETSVSSDGNDEFGSVNDSVEKRKRRA 240

Query: 241 GKCWKVKIKQFIDLQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERER 300
           GKCWKVKIKQFI LQMRKLIDKQEAGLEKLMKTLEQKEK RMVWEEEWRKQEVSRIERER
Sbjct: 241 GKCWKVKIKQFIGLQMRKLIDKQEAGLEKLMKTLEQKEKARMVWEEEWRKQEVSRIERER 300

Query: 301 SFWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQTKTMDQTNKKRK 344
           SFWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQTKTMDQTNKKRK
Sbjct: 301 SFWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQTKTMDQTNKKRK 360

[Close]

BLAST of Cp4.1LG08g10350 vs. NCBI nr
Match: KAG6596550.1 (Trihelix transcription factor PTL, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 600 bits (1548), Expect = 1.85e-213
Identity = 338/445 (75.96%), Postives = 340/445 (76.40%), Query Frame = 0


Query: 1   MDDQYSLSDLRHLITAPPRSHFPSSSIPHHDLASTAFRHHHTPYDLIRSQPTAVLGSASP 60
           MDDQYSLSDLRHLITAP RSHFPSSSIPH DLASTAFRHHHTPYDLIRSQPTAVLGSASP
Sbjct: 1   MDDQYSLSDLRHLITAPLRSHFPSSSIPHRDLASTAFRHHHTPYDLIRSQPTAVLGSASP 60

Query: 61  TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVS--------------- 120
           TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVS               
Sbjct: 61  TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKK 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 CREKFENLYKYYKKTKDGKAGRQDGKNYRFFRQLEALYGETSNATSLPDSHFVGDGNLIF 180

Query: 181 ------------------------SLSFSNTSEFETSASSDGNDEFGSVNDSVEKRKRRA 240
                                   SLS SNTSEFETSASSDGNDEFGSVNDSVEKRKR+A
Sbjct: 181 QQDRTSNPTSGHMSYDAQLKHYCDSLSLSNTSEFETSASSDGNDEFGSVNDSVEKRKRQA 240

Query: 241 GKCWKVKIKQFIDLQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERER 300
           GKCWKVKIKQFIDLQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERER
Sbjct: 241 GKCWKVKIKQFIDLQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERER 300

Query: 301 SFWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQTKTMDQTNKKRK 344
           SFWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQTKTMDQT KKRK
Sbjct: 301 SFWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQTKTMDQTIKKRK 360

[Close]

BLAST of Cp4.1LG08g10350 vs. NCBI nr
Match: XP_023005857.1 (trihelix transcription factor PTL-like [Cucurbita maxima])

HSP 1 Score: 587 bits (1512), Expect = 6.65e-208
Identity = 333/450 (74.00%), Postives = 334/450 (74.22%), Query Frame = 0


Query: 1   MDDQYSLSDLRHLITAPPRSHFPSSSIPHHDLASTAFRHHHTPYDLIRSQPTAVLGSASP 60
           MDDQYSLSDLRHLITAPPRSHF SSSIPHHDLASTAFRHHHTPYDLIRSQPT VLGS SP
Sbjct: 1   MDDQYSLSDLRHLITAPPRSHFLSSSIPHHDLASTAFRHHHTPYDLIRSQPTTVLGSTSP 60

Query: 61  TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVS--------------- 120
           TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVS               
Sbjct: 61  TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKK 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 CREKFENLYKYYKKTKDGKAGRQDGKNYRFFRQLEALYGETSNATSLPDSHFVGDGNLIF 180

Query: 181 ------------------------SLSFSNTSEFETSASSDGNDEFGSVNDSVEKR-KRR 240
                                   SLS SNTSEFETSASSDGNDEFGSVNDSVEKR KRR
Sbjct: 181 QPDGTNNPTSGHMSYDAQLKHYCDSLSLSNTSEFETSASSDGNDEFGSVNDSVEKRRKRR 240

Query: 241 AGKCWKVKIKQFIDLQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERE 300
           AGKCWKVKIKQFID QMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIE E
Sbjct: 241 AGKCWKVKIKQFIDSQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIESE 300

Query: 301 RSFWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQTKTMDQTNKKR 344
           RSFWAKERAWIEARDAALMEALQKLTGKELITAEPH NEDGSEILNNYQTKT+DQ NKKR
Sbjct: 301 RSFWAKERAWIEARDAALMEALQKLTGKELITAEPHPNEDGSEILNNYQTKTIDQNNKKR 360

[Close]

BLAST of Cp4.1LG08g10350 vs. NCBI nr
Match: KAG7028086.1 (Trihelix transcription factor PTL, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 573 bits (1478), Expect = 4.18e-203
Identity = 323/426 (75.82%), Postives = 323/426 (75.82%), Query Frame = 0


Query: 1   MDDQYSLSDLRHLITAPPRSHFPSSSIPHHDLASTAFRHHHTPYDLIRSQPTAVLGSASP 60
           MDDQYSLSDLRHLITAP RSHFPSSSIPHHDLASTAFRHHHTPYDLIRSQPTAVLGSASP
Sbjct: 1   MDDQYSLSDLRHLITAPLRSHFPSSSIPHHDLASTAFRHHHTPYDLIRSQPTAVLGSASP 60

Query: 61  TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVS--------------- 120
           TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVS               
Sbjct: 61  TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKK 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 CREKFENLYKYYKKTKDGKAGRQDGKNYRFFRQLEALYGETSNATSLPDSHFVGDGNLIF 180

Query: 181 ------------------------SLSFSNTSEFETSASSDGNDEFGSVNDSVEKRKRRA 240
                                   SLS SNTSEFETS SSDGNDEFGSVNDSVEKRKRRA
Sbjct: 181 QQDGTSNPTSGHMSYDAQLKHYCDSLSLSNTSEFETSVSSDGNDEFGSVNDSVEKRKRRA 240

Query: 241 GKCWKVKIKQFIDLQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERER 300
           GKCWKVKIKQFIDLQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERER
Sbjct: 241 GKCWKVKIKQFIDLQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERER 300

Query: 301 SFWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQTKTMDQTNKKRK 327
           SFWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQTKTMDQT KKRK
Sbjct: 301 SFWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQTKTMDQTIKKRK 360

[Close]

BLAST of Cp4.1LG08g10350 vs. NCBI nr
Match: XP_022982905.1 (trihelix transcription factor PTL [Cucurbita maxima])

HSP 1 Score: 424 bits (1090), Expect = 9.13e-143
Identity = 288/521 (55.28%), Postives = 311/521 (59.69%), Query Frame = 0


Query: 1   MDDQYSLSDLRHLITAPP-RSHFPSSS-IPHHDLAST--------AFRHH-----HTPYD 60
           MDDQY+LSDLRHL+T PP RSHFPSSS IPHHDL S+        AFRHH     HTPYD
Sbjct: 3   MDDQYALSDLRHLMTTPPSRSHFPSSSSIPHHDLFSSSSTSSSAAAFRHHLHHHHHTPYD 62

Query: 61  LIR----------------SQPTAVLGSASPTSFDAQTT-------TARWPRQETLTLLD 120
           LI                 + P  V    +PT+F+ +T        T RWPRQETLTLLD
Sbjct: 63  LIMMMPRDPLPDFRSDSAATPPAVVSAPTAPTAFELETASLAADCATPRWPRQETLTLLD 122

Query: 121 VRSRLDSKFKEANQKGPLWDEVS------------------------------------- 180
           +RSRLDSKFKEANQKGPLWDEVS                                     
Sbjct: 123 IRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKKCREKFENLYKYYKKTKEGKAGR 182

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 183 QDGKNYRFFRQLEALYGETTNSAQLPDSHFVGDSNLSFQQNGTNNPTTALPMSYETQQKH 242

Query: 241 ---SLSFSNTSEFETSASSDGNDEFGSV----NDSVEKR-KRRAGKCWKVKIKQFIDLQM 300
              SLS SNTSEFETSASSD ND+ GSV    NDSVEKR KRR GKCWK KIKQFID QM
Sbjct: 243 YCDSLSLSNTSEFETSASSDDNDDLGSVGIMDNDSVEKRRKRRGGKCWKAKIKQFIDSQM 302

Query: 301 RKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERERSFWAKERAWIEARDAA 344
           RKLIDKQEA LEKLMKTLEQKEK+RM+ EEEWR+QEVSR++RERSFWAKERAWIEARDAA
Sbjct: 303 RKLIDKQEAWLEKLMKTLEQKEKDRMIREEEWRRQEVSRMDRERSFWAKERAWIEARDAA 362

[Close]

BLAST of Cp4.1LG08g10350 vs. ExPASy TrEMBL
Match: A0A6J1GKK1 (trihelix transcription factor PTL-like OS=Cucurbita moschata OX=3662 GN=LOC111455137 PE=4 SV=1)

HSP 1 Score: 609 bits (1571), Expect = 2.63e-217
Identity = 338/443 (76.30%), Postives = 339/443 (76.52%), Query Frame = 0


Query: 1   MDDQYSLSDLRHLITAPPRSHFPSSSIPHHDLASTAFRHHHTPYDLIRSQPTAVLGSASP 60
           MDDQYSLSDLRHLITAPPRSHFPSSSIPHHDLASTAFRHHHTPYDLIRSQPT VLGSASP
Sbjct: 1   MDDQYSLSDLRHLITAPPRSHFPSSSIPHHDLASTAFRHHHTPYDLIRSQPTTVLGSASP 60

Query: 61  TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVS--------------- 120
           TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVS               
Sbjct: 61  TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKK 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 CREKFENLYKYYKKTKDGKAGRQDGKNYRFFRQLEALYGETSNATSLPDSHFVGDGNLIF 180

Query: 181 ------------------------SLSFSNTSEFETSASSDGNDEFGSVNDSVEKRKRRA 240
                                   SLS SNTSEFETS SSDGNDEFGSVNDSVEKRKRRA
Sbjct: 181 QQDGTSNPTSGHMSYDAQLKHYCDSLSLSNTSEFETSVSSDGNDEFGSVNDSVEKRKRRA 240

Query: 241 GKCWKVKIKQFIDLQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERER 300
           GKCWKVKIKQFI LQMRKLIDKQEAGLEKLMKTLEQKEK RMVWEEEWRKQEVSRIERER
Sbjct: 241 GKCWKVKIKQFIGLQMRKLIDKQEAGLEKLMKTLEQKEKARMVWEEEWRKQEVSRIERER 300

Query: 301 SFWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQTKTMDQTNKKRK 344
           SFWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQTKTMDQTNKKRK
Sbjct: 301 SFWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQTKTMDQTNKKRK 360

[Close]

BLAST of Cp4.1LG08g10350 vs. ExPASy TrEMBL
Match: A0A6J1KUB2 (trihelix transcription factor PTL-like OS=Cucurbita maxima OX=3661 GN=LOC111498734 PE=4 SV=1)

HSP 1 Score: 587 bits (1512), Expect = 3.22e-208
Identity = 333/450 (74.00%), Postives = 334/450 (74.22%), Query Frame = 0


Query: 1   MDDQYSLSDLRHLITAPPRSHFPSSSIPHHDLASTAFRHHHTPYDLIRSQPTAVLGSASP 60
           MDDQYSLSDLRHLITAPPRSHF SSSIPHHDLASTAFRHHHTPYDLIRSQPT VLGS SP
Sbjct: 1   MDDQYSLSDLRHLITAPPRSHFLSSSIPHHDLASTAFRHHHTPYDLIRSQPTTVLGSTSP 60

Query: 61  TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVS--------------- 120
           TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVS               
Sbjct: 61  TSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKK 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 CREKFENLYKYYKKTKDGKAGRQDGKNYRFFRQLEALYGETSNATSLPDSHFVGDGNLIF 180

Query: 181 ------------------------SLSFSNTSEFETSASSDGNDEFGSVNDSVEKR-KRR 240
                                   SLS SNTSEFETSASSDGNDEFGSVNDSVEKR KRR
Sbjct: 181 QPDGTNNPTSGHMSYDAQLKHYCDSLSLSNTSEFETSASSDGNDEFGSVNDSVEKRRKRR 240

Query: 241 AGKCWKVKIKQFIDLQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERE 300
           AGKCWKVKIKQFID QMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIE E
Sbjct: 241 AGKCWKVKIKQFIDSQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIESE 300

Query: 301 RSFWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQTKTMDQTNKKR 344
           RSFWAKERAWIEARDAALMEALQKLTGKELITAEPH NEDGSEILNNYQTKT+DQ NKKR
Sbjct: 301 RSFWAKERAWIEARDAALMEALQKLTGKELITAEPHPNEDGSEILNNYQTKTIDQNNKKR 360

[Close]

BLAST of Cp4.1LG08g10350 vs. ExPASy TrEMBL
Match: A0A6J1J465 (trihelix transcription factor PTL OS=Cucurbita maxima OX=3661 GN=LOC111481611 PE=4 SV=1)

HSP 1 Score: 424 bits (1090), Expect = 4.42e-143
Identity = 288/521 (55.28%), Postives = 311/521 (59.69%), Query Frame = 0


Query: 1   MDDQYSLSDLRHLITAPP-RSHFPSSS-IPHHDLAST--------AFRHH-----HTPYD 60
           MDDQY+LSDLRHL+T PP RSHFPSSS IPHHDL S+        AFRHH     HTPYD
Sbjct: 3   MDDQYALSDLRHLMTTPPSRSHFPSSSSIPHHDLFSSSSTSSSAAAFRHHLHHHHHTPYD 62

Query: 61  LIR----------------SQPTAVLGSASPTSFDAQTT-------TARWPRQETLTLLD 120
           LI                 + P  V    +PT+F+ +T        T RWPRQETLTLLD
Sbjct: 63  LIMMMPRDPLPDFRSDSAATPPAVVSAPTAPTAFELETASLAADCATPRWPRQETLTLLD 122

Query: 121 VRSRLDSKFKEANQKGPLWDEVS------------------------------------- 180
           +RSRLDSKFKEANQKGPLWDEVS                                     
Sbjct: 123 IRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKKCREKFENLYKYYKKTKEGKAGR 182

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 183 QDGKNYRFFRQLEALYGETTNSAQLPDSHFVGDSNLSFQQNGTNNPTTALPMSYETQQKH 242

Query: 241 ---SLSFSNTSEFETSASSDGNDEFGSV----NDSVEKR-KRRAGKCWKVKIKQFIDLQM 300
              SLS SNTSEFETSASSD ND+ GSV    NDSVEKR KRR GKCWK KIKQFID QM
Sbjct: 243 YCDSLSLSNTSEFETSASSDDNDDLGSVGIMDNDSVEKRRKRRGGKCWKAKIKQFIDSQM 302

Query: 301 RKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERERSFWAKERAWIEARDAA 344
           RKLIDKQEA LEKLMKTLEQKEK+RM+ EEEWR+QEVSR++RERSFWAKERAWIEARDAA
Sbjct: 303 RKLIDKQEAWLEKLMKTLEQKEKDRMIREEEWRRQEVSRMDRERSFWAKERAWIEARDAA 362

[Close]

BLAST of Cp4.1LG08g10350 vs. ExPASy TrEMBL
Match: A0A6J1F1R1 (trihelix transcription factor PTL OS=Cucurbita moschata OX=3662 GN=LOC111441376 PE=4 SV=1)

HSP 1 Score: 424 bits (1090), Expect = 4.71e-143
Identity = 288/523 (55.07%), Postives = 311/523 (59.46%), Query Frame = 0


Query: 1   MDDQYSLSDLRHLITAPP-RSHFPSSS-IPHHDL----------ASTAFRHHH----TPY 60
           MDDQY+LSDLRHL+T PP RSHFPSSS IPHHDL          A+ AFRHHH    TPY
Sbjct: 3   MDDQYALSDLRHLMTTPPSRSHFPSSSSIPHHDLFSSSSTSSAAAAAAFRHHHHHHHTPY 62

Query: 61  DLIR----------------SQPTAVLGSASPTSFDAQTT-------TARWPRQETLTLL 120
           DLI                 + P  V    +PT+F+ +T        T RWPRQETLTLL
Sbjct: 63  DLIMMMPRDTLPDFRSDSAATPPAVVSAPTAPTAFELETASLAADCATPRWPRQETLTLL 122

Query: 121 DVRSRLDSKFKEANQKGPLWDEVS------------------------------------ 180
           D+RSRLDSKFKEANQKGPLWDEVS                                    
Sbjct: 123 DIRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKKCREKFENLYKYYKKTKEGKAG 182

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 183 RQDGKNYRFFRQLEALYGETTNSAQLPDSHFVGDSNLSFQQNGTNNPNTALPMSYEAQQK 242

Query: 241 ----SLSFSNTSEFETSASSDGNDEFGSV----NDSVEKR-KRRAGKCWKVKIKQFIDLQ 300
               SLS SNTSEFETSASSD ND+ GSV    NDSVEKR KRR GKCWK KIKQFID Q
Sbjct: 243 HYCDSLSLSNTSEFETSASSDDNDDLGSVGIMDNDSVEKRRKRRGGKCWKAKIKQFIDSQ 302

Query: 301 MRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERERSFWAKERAWIEARDA 344
           MRKLIDKQEA LEKLMKTLEQKEK+RM+ EEEWR+QEVSR++RERSFWAKERAWIEARDA
Sbjct: 303 MRKLIDKQEAWLEKLMKTLEQKEKDRMIREEEWRRQEVSRMDRERSFWAKERAWIEARDA 362

[Close]

BLAST of Cp4.1LG08g10350 vs. ExPASy TrEMBL
Match: A0A0A0LEF7 (Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G750930 PE=4 SV=1)

HSP 1 Score: 415 bits (1067), Expect = 1.14e-139
Identity = 282/518 (54.44%), Postives = 310/518 (59.85%), Query Frame = 0


Query: 1   MDDQYSLSDLRHLITAPP-RSHFPSSS-IPHHDLASTAFRHHHTPYDLIR---------- 60
           MDDQY LSDLRHL++ PP RSHFPSSS IPHHDL+S+AFRHHHTPYDLI           
Sbjct: 1   MDDQYPLSDLRHLLSTPPSRSHFPSSSSIPHHDLSSSAFRHHHTPYDLIMMMPRDTPLPD 60

Query: 61  ------SQPTAVLGSASPT--SFDAQTT-------TARWPRQETLTLLDVRSRLDSKFKE 120
                 + P+A + S  P   +FD +T        TARWPRQETLTLL++RSRLDSKFKE
Sbjct: 61  FRSDSTTTPSASILSPHPVHNAFDPETASIAADCATARWPRQETLTLLEIRSRLDSKFKE 120

Query: 121 ANQKGPLWDEVS------------------------------------------------ 180
           ANQKGPLWDEVS                                                
Sbjct: 121 ANQKGPLWDEVSRIMAEEHNYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKNYRFFRQ 180

Query: 181 ----------------------------------------------------SLSFSNTS 240
                                                               SLS SNTS
Sbjct: 181 LEALYGETSNSPSLPDSHFVGDTNLRFQQNGTNNPTASAPMSHEAHQKHYCDSLSLSNTS 240

Query: 241 EFETSASSDGNDEFGSV----NDSVEKR-KRRAGKCWKVKIKQFIDLQMRKLIDKQEAGL 300
           EFETSASSDGND+ GSV    NDS+EKR K+R GKCWK KIKQFID QMRKLIDKQEA L
Sbjct: 241 EFETSASSDGNDDLGSVGVMDNDSMEKRRKKRGGKCWKAKIKQFIDSQMRKLIDKQEAWL 300

Query: 301 EKLMKTLEQKEKERMVWEEEWRKQEVSRIERERSFWAKERAWIEARDAALMEALQKLTGK 344
           EKLMKTLEQKEKERM+ +EEWR+QEVSR++RERSFWAKERAWIE+RDAALM+ALQ+LTG+
Sbjct: 301 EKLMKTLEQKEKERMIRDEEWRRQEVSRMDRERSFWAKERAWIESRDAALMDALQRLTGR 360

[Close]

BLAST of Cp4.1LG08g10350 vs. TAIR 10
Match: AT5G03680.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-33
Identity = 117/325 (36.00%), Postives = 149/325 (45.85%), Query Frame = 0


Query: 69  TARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVS----------------------- 128
           T RWPRQETLTLL++RSRLD KFKEANQKGPLWDEVS                       
Sbjct: 117 TGRWPRQETLTLLEIRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENL 176

Query: 129 ------------------------------------------------------------ 188
                                                                       
Sbjct: 177 YKYYRKTKEGKAGRQDGKHYRFFRQLEALYGDSNNLVSCPNHNTQFMSSALHGFHTQNPM 236

Query: 189 --------------------SLSFS---NTSEFETSASSDGNDEFGSVNDSVEKRKRRAG 248
                               SLS S   N+SE E   SS         NDS  +RK+R+ 
Sbjct: 237 NVTTTTSNIHNVDSVHGFHQSLSLSNNYNSSELELMTSSSEG------NDSSSRRKKRS- 296

Query: 249 KCWKVKIKQFIDLQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERERS 284
             WK KIK+FID  M++LI++Q+  LEKL K +E KE++RM+ EEEWRK E +RI++E  
Sbjct: 297 --WKAKIKEFIDTNMKRLIERQDVWLEKLTKVIEDKEEQRMMKEEEWRKIEAARIDKEHL 356

[Close]

BLAST of Cp4.1LG08g10350 vs. TAIR 10
Match: AT3G10000.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 5.3e-33
Identity = 134/381 (35.17%), Postives = 171/381 (44.88%), Query Frame = 0


Query: 69  TARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVSSLS-------------FSNTSEF 128
           T RWPRQETL LL+VRSRLD KFKEANQKGPLWDEVS                +  T E 
Sbjct: 86  TGRWPRQETLMLLEVRSRLDHKFKEANQKGPLWDEVSRSGKKCREKFENLYKYYKKTKEG 145

Query: 129 ETSASSDGNDE---------FGSVNDSV-------------------------------- 188
           ++    DG +          +G   DSV                                
Sbjct: 146 KSGRRQDGKNYRFFRQLEAIYGESKDSVSCYNNTQFIMTNALHSNFRASNIHNIVPHHQN 205

Query: 189 ---------------------------------EKRKRRAGKCWKVKIKQFIDLQMRKLI 248
                                             +  +R G  WK KIK+FI + M +LI
Sbjct: 206 PLMTNTNTQSQSLSISNNFNSSSDLDLTSSSEGNETTKREGMHWKEKIKEFIGVHMERLI 265

Query: 249 DKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERERSFWAKERAWIEARDAALMEA 308
           +KQ+  LEKLMK +E KE +RM+ EEEWR+ E  RI++ERSFW KER  IEARD A++ A
Sbjct: 266 EKQDFWLEKLMKIVEDKEHQRMLREEEWRRIEAERIDKERSFWTKERERIEARDVAVINA 325

Query: 309 LQKLTGKELI---TAEPHQNEDG---------SEILNNYQTKTMD--QTNKKRKDNSRS- 337
           LQ LTG+ LI   ++ P +  +G         +E  +      MD  Q NKKRK+   S 
Sbjct: 326 LQYLTGRALIRPDSSSPTERINGNGSDKMMADNEFADEGNKGKMDKKQMNKKRKEKWSSH 385

[Close]

BLAST of Cp4.1LG08g10350 vs. TAIR 10
Match: AT3G10000.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 136.7 bits (343), Expect = 3.4e-32
Identity = 134/391 (34.27%), Postives = 172/391 (43.99%), Query Frame = 0


Query: 69  TARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVSSLS-------------------- 128
           T RWPRQETL LL+VRSRLD KFKEANQKGPLWDEVS +                     
Sbjct: 86  TGRWPRQETLMLLEVRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYTRSGKKCREKFENL 145

Query: 129 ---FSNTSEFETSASSDGNDE---------FGSVNDSV---------------------- 188
              +  T E ++    DG +          +G   DSV                      
Sbjct: 146 YKYYKKTKEGKSGRRQDGKNYRFFRQLEAIYGESKDSVSCYNNTQFIMTNALHSNFRASN 205

Query: 189 -------------------------------------------EKRKRRAGKCWKVKIKQ 248
                                                       +  +R G  WK KIK+
Sbjct: 206 IHNIVPHHQNPLMTNTNTQSQSLSISNNFNSSSDLDLTSSSEGNETTKREGMHWKEKIKE 265

Query: 249 FIDLQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERERSFWAKERAWI 308
           FI + M +LI+KQ+  LEKLMK +E KE +RM+ EEEWR+ E  RI++ERSFW KER  I
Sbjct: 266 FIGVHMERLIEKQDFWLEKLMKIVEDKEHQRMLREEEWRRIEAERIDKERSFWTKERERI 325

Query: 309 EARDAALMEALQKLTGKELI---TAEPHQNEDG---------SEILNNYQTKTMD--QTN 337
           EARD A++ ALQ LTG+ LI   ++ P +  +G         +E  +      MD  Q N
Sbjct: 326 EARDVAVINALQYLTGRALIRPDSSSPTERINGNGSDKMMADNEFADEGNKGKMDKKQMN 385

[Close]

BLAST of Cp4.1LG08g10350 vs. TAIR 10
Match: AT1G76880.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-11
Identity = 55/152 (36.18%), Postives = 86/152 (56.58%), Query Frame = 0


Query: 102 DEVSSLSFSNTSEFETSASSDGNDEFGSVNDSVEKRKRRAGKCWKVKIKQFIDLQMRKLI 161
           D +S  S S++S + TS+  +     G    + +KRKR+    WKV    F +  M++++
Sbjct: 218 DFLSDNSTSSSSSYSTSSDMEMG---GGTATTRKKRKRK----WKV----FFERLMKQVV 277

Query: 162 DKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERERSFWAKERAWIEARDAALMEA 221
           DKQE    K ++ +E++E ER+V EE WR QE++RI RE    A+ER+   A+DAA+M  
Sbjct: 278 DKQEELQRKFLEAVEKREHERLVREESWRVQEIARINREHEILAQERSMSAAKDAAVMAF 337

Query: 222 LQKLTGKE----LITAEPHQNEDGSEILNNYQ 250
           LQKL+ K+        +P Q     ++ NN Q
Sbjct: 338 LQKLSEKQPNQPQPQPQPQQVRPSMQLNNNNQ 358

[Close]

BLAST of Cp4.1LG08g10350 vs. TAIR 10
Match: AT1G76890.2 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 3.5e-08
Identity = 66/228 (28.95%), Postives = 106/228 (46.49%), Query Frame = 0


Query: 24  SSSIPHHDLASTAFRHHH-TPYDLIRSQPTAVLGSASPTSFDAQTTTARWPRQETLTLLD 83
           SSS P  + +S+  +HHH      I + PT +    S T     T    +    T T+  
Sbjct: 161 SSSNPSTEKSSSPLKHHHQVSVQPITTNPTFLAKQPSST-----TPFPFYSSNNTTTV-- 220

Query: 84  VRSRLDSKFKEANQKGPLWDEVSSLSFSNTSEFETSASSDGNDEFGSVNDSVEKRKRRAG 143
                     +      L + VSSL+  ++S   +S +SD  ++   V  S +KRK   G
Sbjct: 221 ---------SQPPISNDLMNNVSSLNLFSSST-SSSTASDEEEDHHQVKSSRKKRKYWKG 280

Query: 144 KCWKVKIKQFIDLQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERERS 203
              K+          ++L++KQE   ++ ++TLE +EKER+  EE WR QE+ RI RE  
Sbjct: 281 LFTKL---------TKELMEKQEKMQKRFLETLEYREKERISREEAWRVQEIGRINREHE 340

Query: 204 FWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQT 251
               ER+   A+DAA++  L K++G +    +P Q+         YQ+
Sbjct: 341 TLIHERSNAAAKDAAIISFLHKISGGQ--PQQPQQHNHKPSQRKQYQS 360

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g10350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZS0	1.5e-32	36.00	Trihelix transcription factor PTL OS=Arabidopsis thaliana OX=3702 GN=PTL PE=1 SV...	[more]
Q9C6K3	2.1e-10	36.18	Trihelix transcription factor DF1 OS=Arabidopsis thaliana OX=3702 GN=DF1 PE=4 SV...	[more]
Q9C882	3.7e-07	28.57	Trihelix transcription factor GTL1 OS=Arabidopsis thaliana OX=3702 GN=GTL1 PE=1 ...	[more]
Q39117	4.9e-07	28.95	Trihelix transcription factor GT-2 OS=Arabidopsis thaliana OX=3702 GN=GT-2 PE=1 ...	[more]

BLAST of Cp4.1LG08g10350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952492.1	5.42e-217	76.30	trihelix transcription factor PTL-like [Cucurbita moschata]	[more]
KAG6596550.1	1.85e-213	75.96	Trihelix transcription factor PTL, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023005857.1	6.65e-208	74.00	trihelix transcription factor PTL-like [Cucurbita maxima]	[more]
KAG7028086.1	4.18e-203	75.82	Trihelix transcription factor PTL, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022982905.1	9.13e-143	55.28	trihelix transcription factor PTL [Cucurbita maxima]	[more]

BLAST of Cp4.1LG08g10350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GKK1	2.63e-217	76.30	trihelix transcription factor PTL-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1KUB2	3.22e-208	74.00	trihelix transcription factor PTL-like OS=Cucurbita maxima OX=3661 GN=LOC1114987...	[more]
A0A6J1J465	4.42e-143	55.28	trihelix transcription factor PTL OS=Cucurbita maxima OX=3661 GN=LOC111481611 PE...	[more]
A0A6J1F1R1	4.71e-143	55.07	trihelix transcription factor PTL OS=Cucurbita moschata OX=3662 GN=LOC111441376 ...	[more]
A0A0A0LEF7	1.14e-139	54.44	Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G750930 PE...	[more]

BLAST of Cp4.1LG08g10350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03680.1	1.1e-33	36.00	Duplicated homeodomain-like superfamily protein	[more]
AT3G10000.2	5.3e-33	35.17	Homeodomain-like superfamily protein	[more]
AT3G10000.1	3.4e-32	34.27	Homeodomain-like superfamily protein	[more]
AT1G76880.1	1.5e-11	36.18	Duplicated homeodomain-like superfamily protein	[more]
AT1G76890.2	3.5e-08	28.95	Duplicated homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 161..188
None	No IPR available	GENE3D	1.10.10.60		coord: 72..117 e-value: 1.5E-8 score: 36.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 282..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..270
None	No IPR available	PANTHER	PTHR21654	FAMILY NOT NAMED	coord: 243..331
None	No IPR available	PANTHER	PTHR21654:SF60	TRIHELIX TRANSCRIPTION FACTOR PTL	coord: 60..105
None	No IPR available	PANTHER	PTHR21654	FAMILY NOT NAMED	coord: 60..105 coord: 106..238
None	No IPR available	PANTHER	PTHR21654:SF60	TRIHELIX TRANSCRIPTION FACTOR PTL	coord: 243..331
None	No IPR available	PANTHER	PTHR21654:SF60	TRIHELIX TRANSCRIPTION FACTOR PTL	coord: 106..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g10350.1	Cp4.1LG08g10350.1	mRNA