Cp4.1LG08g10130 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g10130
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	CASP-like protein
Location	Cp4.1LG08: 7734832 .. 7735104 (-)
RNA-Seq Expression	Cp4.1LG08g10130
Synteny	Cp4.1LG08g10130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACTCGAACGACTCGACCGTCATCGACGTGCCCCCGACCGCTGGCAGCAGCAAAAGCAAAGCAGCTGCTTCCGTCGCTTCCCGGCAAGTAAATGCTGGCAGGATGAAGCGGGGGCTCGGGGTGTTCGACTTTGTTTTGAGACTTGGTGCTTTGGGTGCTGCCTTGGCAGCCGCCGCGACTATGGGAACAAGCGATGAAACTCTCCCTTTCTTTACTCAATTCTTCCAATTTGAAGCTAGTTATGAAGATCTCCCCACTTTTCAGTAA

mRNA sequence

ATGAAGAACTCGAACGACTCGACCGTCATCGACGTGCCCCCGACCGCTGGCAGCAGCAAAAGCAAAGCAGCTGCTTCCGTCGCTTCCCGGCAAGTAAATGCTGGCAGGATGAAGCGGGGGCTCGGGGTGTTCGACTTTGTTTTGAGACTTGGTGCTTTGGGTGCTGCCTTGGCAGCCGCCGCGACTATGGGAACAAGCGATGAAACTCTCCCTTTCTTTACTCAATTCTTCCAATTTGAAGCTAGTTATGAAGATCTCCCCACTTTTCAGTAA

Coding sequence (CDS)

ATGAAGAACTCGAACGACTCGACCGTCATCGACGTGCCCCCGACCGCTGGCAGCAGCAAAAGCAAAGCAGCTGCTTCCGTCGCTTCCCGGCAAGTAAATGCTGGCAGGATGAAGCGGGGGCTCGGGGTGTTCGACTTTGTTTTGAGACTTGGTGCTTTGGGTGCTGCCTTGGCAGCCGCCGCGACTATGGGAACAAGCGATGAAACTCTCCCTTTCTTTACTCAATTCTTCCAATTTGAAGCTAGTTATGAAGATCTCCCCACTTTTCAGTAA

Protein sequence

MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAAAATMGTSDETLPFFTQFFQFEASYEDLPTFQ

Homology

[Close]

BLAST of Cp4.1LG08g10130 vs. ExPASy Swiss-Prot
Match: P0DI43 (Casparian strip membrane protein 1 OS=Theobroma cacao OX=3641 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.3e-22
Identity = 57/86 (66.28%), Postives = 67/86 (77.91%), Query Frame = 0


Query: 4  SNDSTVIDVPPTAGSSKSKAAASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAAAATM 63
          S D   IDVP ++  +K KA      R+  +G  K+GLG+FDF+LRLGA+ AALAAAATM
Sbjct: 3  SGDHAAIDVPESSAVAKGKAPLIATPREQKSG-FKKGLGIFDFLLRLGAIIAALAAAATM 62

Query: 64 GTSDETLPFFTQFFQFEASYEDLPTF 90
          GTSDETLPFFTQFFQFEASY+DLPTF
Sbjct: 63 GTSDETLPFFTQFFQFEASYDDLPTF 87

[Close]

BLAST of Cp4.1LG08g10130 vs. ExPASy Swiss-Prot
Match: B9SX13 (Casparian strip membrane protein 2 OS=Ricinus communis OX=3988 GN=RCOM_1259260 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.2e-20
Identity = 53/86 (61.63%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 5  NDSTVIDVPPTAGSSKSKAAASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAAAATMG 64
          +DS  IDVP ++  +K KA      R  N G  K+GL +FDF+LRLGA+ AAL AA+TMG
Sbjct: 4  SDSVAIDVPESSSVAKRKAPFMANIRDENGG-YKKGLAIFDFILRLGAIAAALGAASTMG 63

Query: 65 TSDETLPFFTQFFQFEASYEDLPTFQ 91
          TSDETLPFFTQFFQF A Y+D PTFQ
Sbjct: 64 TSDETLPFFTQFFQFNAGYDDFPTFQ 88

[Close]

BLAST of Cp4.1LG08g10130 vs. ExPASy Swiss-Prot
Match: B9HBX2 (Casparian strip membrane protein 1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_763057 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 8.5e-20
Identity = 50/86 (58.14%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 5  NDSTVIDVPPTAGSSKSKAAASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAAAATMG 64
          ++S  ID+P ++  +K KA     SR    G  ++G+ +FDF+LRL A+  ALAAAA MG
Sbjct: 3  SESAAIDIPESSSVAKGKAPLIAVSRNEKGG-YRKGIAIFDFILRLAAIATALAAAAAMG 62

Query: 65 TSDETLPFFTQFFQFEASYEDLPTFQ 91
          TSDETLPFFTQFFQF+ASY+DLPTFQ
Sbjct: 63 TSDETLPFFTQFFQFQASYDDLPTFQ 87

[Close]

BLAST of Cp4.1LG08g10130 vs. ExPASy Swiss-Prot
Match: D7LZ50 (Casparian strip membrane protein 4 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_660474 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 8.5e-20
Identity = 56/88 (63.64%), Postives = 66/88 (75.00%), Query Frame = 0


Query: 5  NDSTVIDVPPTAGSS-KSKA-AASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAAAAT 64
          +DS  +DVP  + S+ K KA    +A     +G  KRGL +FDF+LRL A+ AALAAAAT
Sbjct: 3  SDSIAVDVPAESSSAIKGKAPLLGLARDHTGSGGYKRGLSIFDFLLRLAAIVAALAAAAT 62

Query: 65 MGTSDETLPFFTQFFQFEASYEDLPTFQ 91
          MGTSDETLPFFTQF QFEASY+DLPTFQ
Sbjct: 63 MGTSDETLPFFTQFLQFEASYDDLPTFQ 90

[Close]

BLAST of Cp4.1LG08g10130 vs. ExPASy Swiss-Prot
Match: D7LAP2 (Casparian strip membrane protein 2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_478496 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.5e-19
Identity = 57/90 (63.33%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 5  NDSTVIDVPPTAGSS-KSKAAASVASRQ---VNAGRMKRGLGVFDFVLRLGALGAALAAA 64
          N+ST IDVP  + S+ K KA     +R      +G   RGL +FDF+LRL A+ AALAAA
Sbjct: 3  NESTTIDVPAESSSAMKGKAPLIGVARDHTTSGSGGYNRGLSIFDFLLRLAAIVAALAAA 62

Query: 65 ATMGTSDETLPFFTQFFQFEASYEDLPTFQ 91
          ATMGTSDETLPFFTQF QFEASY+DLPTFQ
Sbjct: 63 ATMGTSDETLPFFTQFLQFEASYDDLPTFQ 92

[Close]

BLAST of Cp4.1LG08g10130 vs. NCBI nr
Match: XP_023538909.1 (casparian strip membrane protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169 bits (427), Expect = 5.42e-51
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAAA 60
          MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAAA
Sbjct: 1  MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAAA 60

Query: 61 ATMGTSDETLPFFTQFFQFEASYEDLPTFQ 90
          ATMGTSDETLPFFTQFFQFEASYEDLPTFQ
Sbjct: 61 ATMGTSDETLPFFTQFFQFEASYEDLPTFQ 90

[Close]

BLAST of Cp4.1LG08g10130 vs. NCBI nr
Match: XP_022945176.1 (casparian strip membrane protein 1-like [Cucurbita moschata] >KAG6596587.1 Casparian strip membrane protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028124.1 Casparian strip membrane protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166 bits (420), Expect = 6.26e-50
Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAAA 60
          MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNAG MKRGLGVFDFVLRLGALGAALAAA
Sbjct: 1  MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNAGGMKRGLGVFDFVLRLGALGAALAAA 60

Query: 61 ATMGTSDETLPFFTQFFQFEASYEDLPTFQ 90
          ATMGTSDETLPFFTQFFQFEASYEDLPTFQ
Sbjct: 61 ATMGTSDETLPFFTQFFQFEASYEDLPTFQ 90

[Close]

BLAST of Cp4.1LG08g10130 vs. NCBI nr
Match: XP_023005173.1 (casparian strip membrane protein 1-like [Cucurbita maxima])

HSP 1 Score: 159 bits (402), Expect = 3.38e-47
Identity = 86/90 (95.56%), Postives = 86/90 (95.56%), Query Frame = 0


Query: 1  MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAAA 60
          MKNSNDSTVIDVP T GSSKSKAAASVASRQ NAG MKRGLGVFDFVLRLGALGAALAAA
Sbjct: 1  MKNSNDSTVIDVPLTTGSSKSKAAASVASRQANAGGMKRGLGVFDFVLRLGALGAALAAA 60

Query: 61 ATMGTSDETLPFFTQFFQFEASYEDLPTFQ 90
          ATMGTSDETLPFFTQFFQFEASYEDLPTFQ
Sbjct: 61 ATMGTSDETLPFFTQFFQFEASYEDLPTFQ 90

[Close]

BLAST of Cp4.1LG08g10130 vs. NCBI nr
Match: XP_038905871.1 (casparian strip membrane protein 2 [Benincasa hispida])

HSP 1 Score: 138 bits (347), Expect = 7.15e-39
Identity = 74/90 (82.22%), Postives = 78/90 (86.67%), Query Frame = 0


Query: 1  MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAAA 60
          MKNS DSTVIDVPPTAGSSK KA  S A RQ   G +KRGL +FDFVLRLGALGAAL AA
Sbjct: 1  MKNSGDSTVIDVPPTAGSSKKKAVVSTAPRQAGGG-VKRGLAIFDFVLRLGALGAALGAA 60

Query: 61 ATMGTSDETLPFFTQFFQFEASYEDLPTFQ 90
          A+MGTSDETLPFFTQFFQFEASY+DLPTFQ
Sbjct: 61 ASMGTSDETLPFFTQFFQFEASYDDLPTFQ 89

[Close]

BLAST of Cp4.1LG08g10130 vs. NCBI nr
Match: XP_004149191.1 (casparian strip membrane protein 2 [Cucumis sativus] >KGN59158.1 hypothetical protein Csa_001066 [Cucumis sativus])

HSP 1 Score: 133 bits (335), Expect = 4.82e-37
Identity = 71/90 (78.89%), Postives = 76/90 (84.44%), Query Frame = 0


Query: 1  MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAAA 60
          MKNS DSTVIDVPPTA SSK KA  S A+    +G +KRGL +FDFVLRLGALGAAL AA
Sbjct: 1  MKNSGDSTVIDVPPTAASSKKKAVVSTAAPGQASGGVKRGLSIFDFVLRLGALGAALGAA 60

Query: 61 ATMGTSDETLPFFTQFFQFEASYEDLPTFQ 90
          A MGTSDETLPFFTQFFQFEASY+DLPTFQ
Sbjct: 61 AAMGTSDETLPFFTQFFQFEASYDDLPTFQ 90

[Close]

BLAST of Cp4.1LG08g10130 vs. ExPASy TrEMBL
Match: A0A6J1G046 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449494 PE=3 SV=1)

HSP 1 Score: 166 bits (420), Expect = 3.03e-50
Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAAA 60
          MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNAG MKRGLGVFDFVLRLGALGAALAAA
Sbjct: 1  MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNAGGMKRGLGVFDFVLRLGALGAALAAA 60

Query: 61 ATMGTSDETLPFFTQFFQFEASYEDLPTFQ 90
          ATMGTSDETLPFFTQFFQFEASYEDLPTFQ
Sbjct: 61 ATMGTSDETLPFFTQFFQFEASYEDLPTFQ 90

[Close]

BLAST of Cp4.1LG08g10130 vs. ExPASy TrEMBL
Match: A0A6J1L1G0 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111498282 PE=3 SV=1)

HSP 1 Score: 159 bits (402), Expect = 1.64e-47
Identity = 86/90 (95.56%), Postives = 86/90 (95.56%), Query Frame = 0


Query: 1  MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAAA 60
          MKNSNDSTVIDVP T GSSKSKAAASVASRQ NAG MKRGLGVFDFVLRLGALGAALAAA
Sbjct: 1  MKNSNDSTVIDVPLTTGSSKSKAAASVASRQANAGGMKRGLGVFDFVLRLGALGAALAAA 60

Query: 61 ATMGTSDETLPFFTQFFQFEASYEDLPTFQ 90
          ATMGTSDETLPFFTQFFQFEASYEDLPTFQ
Sbjct: 61 ATMGTSDETLPFFTQFFQFEASYEDLPTFQ 90

[Close]

BLAST of Cp4.1LG08g10130 vs. ExPASy TrEMBL
Match: A0A0A0LBG8 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G777660 PE=3 SV=1)

HSP 1 Score: 133 bits (335), Expect = 2.33e-37
Identity = 71/90 (78.89%), Postives = 76/90 (84.44%), Query Frame = 0


Query: 1  MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAAA 60
          MKNS DSTVIDVPPTA SSK KA  S A+    +G +KRGL +FDFVLRLGALGAAL AA
Sbjct: 1  MKNSGDSTVIDVPPTAASSKKKAVVSTAAPGQASGGVKRGLSIFDFVLRLGALGAALGAA 60

Query: 61 ATMGTSDETLPFFTQFFQFEASYEDLPTFQ 90
          A MGTSDETLPFFTQFFQFEASY+DLPTFQ
Sbjct: 61 AAMGTSDETLPFFTQFFQFEASYDDLPTFQ 90

[Close]

BLAST of Cp4.1LG08g10130 vs. ExPASy TrEMBL
Match: A0A5D3DPU1 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004150 PE=3 SV=1)

HSP 1 Score: 133 bits (334), Expect = 3.40e-37
Identity = 72/91 (79.12%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 1  MKNSNDSTVIDVPPTAGSS-KSKAAASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAA 60
          MKNS DSTVIDVPPTAGSS K KA  S A+ Q  +G +KRGL +FDFV+RLGALGAAL A
Sbjct: 1  MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60

Query: 61 AATMGTSDETLPFFTQFFQFEASYEDLPTFQ 90
          AA MGTSDETLPFFTQFFQFEASY+DLPTFQ
Sbjct: 61 AAAMGTSDETLPFFTQFFQFEASYDDLPTFQ 91

[Close]

BLAST of Cp4.1LG08g10130 vs. ExPASy TrEMBL
Match: A0A1S3B7G3 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103486637 PE=3 SV=1)

HSP 1 Score: 133 bits (334), Expect = 3.40e-37
Identity = 72/91 (79.12%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 1  MKNSNDSTVIDVPPTAGSS-KSKAAASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAA 60
          MKNS DSTVIDVPPTAGSS K KA  S A+ Q  +G +KRGL +FDFV+RLGALGAAL A
Sbjct: 1  MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60

Query: 61 AATMGTSDETLPFFTQFFQFEASYEDLPTFQ 90
          AA MGTSDETLPFFTQFFQFEASY+DLPTFQ
Sbjct: 61 AAAMGTSDETLPFFTQFFQFEASYDDLPTFQ 91

[Close]

BLAST of Cp4.1LG08g10130 vs. TAIR 10
Match: AT3G11550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 96.3 bits (238), Expect = 1.3e-20
Identity = 57/90 (63.33%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 5  NDSTVIDVPPTAGSS-KSKAAASVASRQ---VNAGRMKRGLGVFDFVLRLGALGAALAAA 64
          N+ST IDVP  + S+ K KA     +R      +G   RGL +FDF+LRL A+ AALAAA
Sbjct: 3  NESTFIDVPAESSSAMKGKAPLIGVARDHTTSGSGGYNRGLAIFDFLLRLAAIVAALAAA 62

Query: 65 ATMGTSDETLPFFTQFFQFEASYEDLPTFQ 91
          ATMGTSDETLPFFTQF QFEASY+DLPTFQ
Sbjct: 63 ATMGTSDETLPFFTQFLQFEASYDDLPTFQ 92

[Close]

BLAST of Cp4.1LG08g10130 vs. TAIR 10
Match: AT5G06200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 96.3 bits (238), Expect = 1.3e-20
Identity = 56/88 (63.64%), Postives = 65/88 (73.86%), Query Frame = 0


Query: 5  NDSTVIDVPPTAGS-SKSKA-AASVASRQVNAGRMKRGLGVFDFVLRLGALGAALAAAAT 64
          +DS  +DVP  + S  K KA    +A     +G  KRGL +FDF+LRL A+ AALAAAAT
Sbjct: 3  SDSIAVDVPAESSSVIKGKAPLLGLARDHTGSGGYKRGLSIFDFLLRLAAIVAALAAAAT 62

Query: 65 MGTSDETLPFFTQFFQFEASYEDLPTFQ 91
          MGTSDETLPFFTQF QFEASY+DLPTFQ
Sbjct: 63 MGTSDETLPFFTQFLQFEASYDDLPTFQ 90

[Close]

BLAST of Cp4.1LG08g10130 vs. TAIR 10
Match: AT2G36100.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 76.3 bits (186), Expect = 1.4e-14
Identity = 48/97 (49.48%), Postives = 60/97 (61.86%), Query Frame = 0


Query: 4  SNDSTVIDV--PPTAGSS--------KSKAAASVASRQVNAGRMKRGLGVFDFVLRLGAL 63
          + +ST IDV  P T   S        K K   +VASR    G  KRGL +FDF+LRL A+
Sbjct: 2  AKESTTIDVGEPSTVTKSSSHVVKDAKKKGFVAVASR----GGAKRGLAIFDFLLRLAAI 61

Query: 64 GAALAAAATMGTSDETLPFFTQFFQFEASYEDLPTFQ 91
             + AA+ M T++ETLPFFTQF QF+A Y+DLP FQ
Sbjct: 62 AVTIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQ 94

[Close]

BLAST of Cp4.1LG08g10130 vs. TAIR 10
Match: AT2G27370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 70.5 bits (171), Expect = 7.9e-13
Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 0


Query: 38  KRGLGVFDFVLRLGALGAALAAAATMGTSDETLPFFTQFFQFEASYEDLPT 89
           KRG+ +FDFVLRL A   A+AAAA M T++ETLPFFTQF QF+A Y DLPT
Sbjct: 56  KRGVAIFDFVLRLIAAITAMAAAAKMATTEETLPFFTQFLQFQADYTDLPT 106

[Close]

BLAST of Cp4.1LG08g10130 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 56.6 bits (135), Expect = 1.2e-08
Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 34 AGRMKRGLGVFDFVLRLGALGAALAAAATMGTSDETLPFFTQFFQFEASYEDLP 88
          +G M R + + +F+LR+ A    + +A  MGT+ ETLPFFTQF +F+A Y DLP
Sbjct: 18 SGLMSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLP 71

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g10130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DI43	5.3e-22	66.28	Casparian strip membrane protein 1 OS=Theobroma cacao OX=3641 PE=2 SV=1	[more]
B9SX13	2.2e-20	61.63	Casparian strip membrane protein 2 OS=Ricinus communis OX=3988 GN=RCOM_1259260 P...	[more]
B9HBX2	8.5e-20	58.14	Casparian strip membrane protein 1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_...	[more]
D7LZ50	8.5e-20	63.64	Casparian strip membrane protein 4 OS=Arabidopsis lyrata subsp. lyrata OX=81972 ...	[more]
D7LAP2	1.5e-19	63.33	Casparian strip membrane protein 2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 ...	[more]

BLAST of Cp4.1LG08g10130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538909.1	5.42e-51	100.00	casparian strip membrane protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022945176.1	6.26e-50	98.89	casparian strip membrane protein 1-like [Cucurbita moschata] >KAG6596587.1 Caspa...	[more]
XP_023005173.1	3.38e-47	95.56	casparian strip membrane protein 1-like [Cucurbita maxima]	[more]
XP_038905871.1	7.15e-39	82.22	casparian strip membrane protein 2 [Benincasa hispida]	[more]
XP_004149191.1	4.82e-37	78.89	casparian strip membrane protein 2 [Cucumis sativus] >KGN59158.1 hypothetical pr...	[more]

BLAST of Cp4.1LG08g10130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G046	3.03e-50	98.89	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449494 PE=3 SV=1	[more]
A0A6J1L1G0	1.64e-47	95.56	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111498282 PE=3 SV=1	[more]
A0A0A0LBG8	2.33e-37	78.89	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G777660 PE=3 SV=1	[more]
A0A5D3DPU1	3.40e-37	79.12	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00...	[more]
A0A1S3B7G3	3.40e-37	79.12	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103486637 PE=3 SV=1	[more]

BLAST of Cp4.1LG08g10130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11550.1	1.3e-20	63.33	Uncharacterised protein family (UPF0497)	[more]
AT5G06200.1	1.3e-20	63.64	Uncharacterised protein family (UPF0497)	[more]
AT2G36100.1	1.4e-14	49.48	Uncharacterised protein family (UPF0497)	[more]
AT2G27370.1	7.9e-13	68.63	Uncharacterised protein family (UPF0497)	[more]
AT5G15290.1	1.2e-08	48.15	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 39..89 e-value: 3.8E-10 score: 39.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 14..90
None	No IPR available	PANTHER	PTHR11615:SF332	CASP-LIKE PROTEIN	coord: 14..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g10130.1	Cp4.1LG08g10130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007043	cell-cell junction assembly
biological_process	GO:0042545	cell wall modification
cellular_component	GO:0048226	Casparian strip
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding