Cp4.1LG08g09880 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g09880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Protein GL2-INTERACTING REPRESSOR 1
Location	Cp4.1LG08: 7690695 .. 7691238 (-)
RNA-Seq Expression	Cp4.1LG08g09880
Synteny	Cp4.1LG08g09880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTCCCCACAAACTCACTCATACATTCTCACTCTCCTCCGCCTTCCTCCGCCGTCGTCGCCGCCGTCTGATTTTCCAATTCTCAAGGTACAAATACAATAATGTTCAAGTTCTGTTTTTTTTTTTTTTTTTAATTTTGAATTTTGATGAATTTTGATTTATGATAACAGAAAAGGGAGAGACAATGAGCAGAAGAAGCAATGGAAGTGTTCCAAAGCTTGAATTGAAGCTGAACCTGTCACCACCACGGTCACATTCACTGATGTCATCACCAAGCCGATCGGCGACAGTGTCACCCACATCGCCACCAAGCTCTTGCGTGTCGTTGGAGCTAAACCAAGACGATGGTACCGCACTAAGATACTCAAGCAGTCCGGAAGCCACCTCAATGGTGCTGGTGGGGTGCCCTCGCTGTCTTATGTACGTAATGCTGTCGGAGAATGACCCCAAATGCCCGAAATGCAAAAGCTCTGTTTTGCTGGATTTTCTCCATGATGGCGGCGCCACCGCACCTCCGCCGTCCACGGCCGTCGCCCGGAAGATC

mRNA sequence

TGTTCCCCACAAACTCACTCATACATTCTCACTCTCCTCCGCCTTCCTCCGCCGTCGTCGCCGCCGTCTGATTTTCCAATTCTCAAGGGAGAGACAATGAGCAGAAGAAGCAATGGAAGTGTTCCAAAGCTTGAATTGAAGCTGAACCTGTCACCACCACGGTCACATTCACTGATGTCATCACCAAGCCGATCGGCGACAGTGTCACCCACATCGCCACCAAGCTCTTGCGTGTCGTTGGAGCTAAACCAAGACGATGGTACCGCACTAAGATACTCAAGCAGTCCGGAAGCCACCTCAATGGTGCTGGTGGGGTGCCCTCGCTGTCTTATGTACGTAATGCTGTCGGAGAATGACCCCAAATGCCCGAAATGCAAAAGCTCTGTTTTGCTGGATTTTCTCCATGATGGCGGCGCCACCGCACCTCCGCCGTCCACGGCCGTCGCCCGGAAGATC

Coding sequence (CDS)

TGTTCCCCACAAACTCACTCATACATTCTCACTCTCCTCCGCCTTCCTCCGCCGTCGTCGCCGCCGTCTGATTTTCCAATTCTCAAGGGAGAGACAATGAGCAGAAGAAGCAATGGAAGTGTTCCAAAGCTTGAATTGAAGCTGAACCTGTCACCACCACGGTCACATTCACTGATGTCATCACCAAGCCGATCGGCGACAGTGTCACCCACATCGCCACCAAGCTCTTGCGTGTCGTTGGAGCTAAACCAAGACGATGGTACCGCACTAAGATACTCAAGCAGTCCGGAAGCCACCTCAATGGTGCTGGTGGGGTGCCCTCGCTGTCTTATGTACGTAATGCTGTCGGAGAATGACCCCAAATGCCCGAAATGCAAAAGCTCTGTTTTGCTGGATTTTCTCCATGATGGCGGCGCCACCGCACCTCCGCCGTCCACGGCCGTCGCCCGGAAGATC

Protein sequence

CSPQTHSYILTLLRLPPPSSPPSDFPILKGETMSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI

Homology

[Close]

BLAST of Cp4.1LG08g09880 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.2e-36
Identity = 83/119 (69.75%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 33  MSRRSNGSVPKLELKLNLSPPRS--HSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTAL 92
           MSRRS    PKLELKLNLSPP S    ++ SPSRSAT SPTSPPSSCVS E+NQD+  ++
Sbjct: 1   MSRRS----PKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDE-PSV 60

Query: 93  RYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVA 150
           RYS+SPE TSMVLVGCPRCLMYVMLSE+DPKCPKCKS+VLLDFLH+    A   + A +
Sbjct: 61  RYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNANANAAAAS 114

[Close]

BLAST of Cp4.1LG08g09880 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.0e-25
Identity = 67/119 (56.30%), Postives = 80/119 (67.23%), Query Frame = 0


Query: 33  MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 92
           MSRR N + PKLEL+LNLSPP S +   S  RS   S T+ PSSCVS E NQ++   +  
Sbjct: 1   MSRR-NKNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEENETI-- 60

Query: 93  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARK 152
                 TSMVLVGCPRCLMYVMLS++DPKCPKCKS+VLLDFL +    A   + A  R+
Sbjct: 61  ------TSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATTATAANTRR 110

[Close]

BLAST of Cp4.1LG08g09880 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.6e-10
Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 44  LELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRYSSSPEATSMVL 103
           L+LKLN+SP    SL++  S S+  S  +                        EA SMV+
Sbjct: 11  LDLKLNISPSLDSSLLTESSSSSLCSEEAE-------------------GGGGEAKSMVV 70

Query: 104 VGCPRCLMYVMLS-ENDPKCPKCKSSVLLDFL 135
           VGCP C+MY++ S ENDP+CP+C S VLLDFL
Sbjct: 71  VGCPNCIMYIITSLENDPRCPRCNSHVLLDFL 83

[Close]

BLAST of Cp4.1LG08g09880 vs. NCBI nr
Match: XP_023539011.1 (uncharacterized protein LOC111799770 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237 bits (605), Expect = 3.66e-78
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 33  MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 92
           MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60

Query: 93  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 152
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 120

[Close]

BLAST of Cp4.1LG08g09880 vs. NCBI nr
Match: XP_022958318.1 (uncharacterized protein LOC111459550 [Cucurbita moschata])

HSP 1 Score: 236 bits (601), Expect = 1.49e-77
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 33  MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 92
           MSRRSNGSVPKLELKLNLSPP+SHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPQSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60

Query: 93  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 152
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 120

[Close]

BLAST of Cp4.1LG08g09880 vs. NCBI nr
Match: XP_023005134.1 (uncharacterized protein LOC111498264 [Cucurbita maxima])

HSP 1 Score: 235 bits (600), Expect = 2.12e-77
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 33  MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 92
           MSRRSNGSVPKLELKLNLSPPR HSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60

Query: 93  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 152
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 120

[Close]

BLAST of Cp4.1LG08g09880 vs. NCBI nr
Match: KAG6596596.1 (Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028133.1 hypothetical protein SDJN02_09313, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 233 bits (593), Expect = 2.47e-76
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 33  MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 92
           MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGT LRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTTLRY 60

Query: 93  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 152
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATA PPSTAVARKI
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATASPPSTAVARKI 120

[Close]

BLAST of Cp4.1LG08g09880 vs. NCBI nr
Match: XP_023528090.1 (early nodulin-20-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219 bits (557), Expect = 2.18e-70
Identity = 118/147 (80.27%), Postives = 125/147 (85.03%), Query Frame = 0


Query: 10  LTLLRLPPPSSPPS---DFPILKGETMSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSA 69
           LT    PPP SPPS    F +L+ E MSRRS+GSVPKLELKLNLSPPR H L SSPSRSA
Sbjct: 7   LTFSHPPPPPSPPSAFQHFKVLEEEKMSRRSSGSVPKLELKLNLSPPRQHPLGSSPSRSA 66

Query: 70  TVSPTSPPSSCVSLELNQDD-GTALRYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKC 129
           T+SPTSPPSSCVSLELNQDD G ALRYSSSPEATSMVLVGCPRCLMYVMLSEN+PKCPKC
Sbjct: 67  TLSPTSPPSSCVSLELNQDDSGAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC 126

Query: 130 KSSVLLDFLHDGGATAPPPSTAVARKI 152
           KSSVLLDFLHDG A+ P PST  ARK+
Sbjct: 127 KSSVLLDFLHDGAASGP-PSTGAARKM 152

[Close]

BLAST of Cp4.1LG08g09880 vs. ExPASy TrEMBL
Match: A0A6J1H2T2 (uncharacterized protein LOC111459550 OS=Cucurbita moschata OX=3662 GN=LOC111459550 PE=4 SV=1)

HSP 1 Score: 236 bits (601), Expect = 7.22e-78
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 33  MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 92
           MSRRSNGSVPKLELKLNLSPP+SHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPQSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60

Query: 93  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 152
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 120

[Close]

BLAST of Cp4.1LG08g09880 vs. ExPASy TrEMBL
Match: A0A6J1KYB2 (uncharacterized protein LOC111498264 OS=Cucurbita maxima OX=3661 GN=LOC111498264 PE=4 SV=1)

HSP 1 Score: 235 bits (600), Expect = 1.03e-77
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 33  MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 92
           MSRRSNGSVPKLELKLNLSPPR HSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60

Query: 93  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 152
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 120

[Close]

BLAST of Cp4.1LG08g09880 vs. ExPASy TrEMBL
Match: A0A6J1J6Y2 (uncharacterized protein LOC111481787 OS=Cucurbita maxima OX=3661 GN=LOC111481787 PE=4 SV=1)

HSP 1 Score: 217 bits (552), Expect = 6.10e-70
Identity = 118/147 (80.27%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 10  LTLLRLPPPSSPPS---DFPILKGETMSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSA 69
           LT    PPP SPPS   +F  L+ E MSRRS+GSVPKL+LKLNLSPPR H L SSPSRSA
Sbjct: 7   LTFSHPPPPPSPPSSFQNFKRLEEEKMSRRSSGSVPKLDLKLNLSPPRQHPLGSSPSRSA 66

Query: 70  TVSPTSPPSSCVSLELNQDDGTA-LRYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKC 129
           T+SPTSPPSSCVSLELNQDD +A LRYSSSPEATSMVLVGCPRCLMYVMLSEN+PKCPKC
Sbjct: 67  TLSPTSPPSSCVSLELNQDDSSAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC 126

Query: 130 KSSVLLDFLHDGGATAPPPSTAVARKI 152
           KSSVLLDFLHDG A+ P PSTA ARKI
Sbjct: 127 KSSVLLDFLHDGAASGP-PSTAAARKI 152

[Close]

BLAST of Cp4.1LG08g09880 vs. ExPASy TrEMBL
Match: A0A5A7TLW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23737G00010 PE=4 SV=1)

HSP 1 Score: 206 bits (523), Expect = 5.59e-66
Identity = 108/121 (89.26%), Postives = 112/121 (92.56%), Query Frame = 0


Query: 33  MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDG-TALR 92
           MSRRS+GSVPKLELKLNLSPPR H L+SSPSRSATVSPTSPPSSCVS ELNQDDG  ALR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60

Query: 93  YSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARK 152
           YSSSPEATSMVLVGCPRCLMYVMLSEN+PKCPKCKSSVLLDFLHDG A+AP PST  ARK
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAP-PSTTAARK 120

[Close]

BLAST of Cp4.1LG08g09880 vs. ExPASy TrEMBL
Match: A0A1S3B7J8 (uncharacterized protein LOC103486655 OS=Cucumis melo OX=3656 GN=LOC103486655 PE=4 SV=1)

HSP 1 Score: 206 bits (523), Expect = 5.59e-66
Identity = 108/121 (89.26%), Postives = 112/121 (92.56%), Query Frame = 0


Query: 33  MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDG-TALR 92
           MSRRS+GSVPKLELKLNLSPPR H L+SSPSRSATVSPTSPPSSCVS ELNQDDG  ALR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60

Query: 93  YSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARK 152
           YSSSPEATSMVLVGCPRCLMYVMLSEN+PKCPKCKSSVLLDFLHDG A+AP PST  ARK
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAP-PSTTAARK 120

[Close]

BLAST of Cp4.1LG08g09880 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 153.3 bits (386), Expect = 1.6e-37
Identity = 83/119 (69.75%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 33  MSRRSNGSVPKLELKLNLSPPRS--HSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTAL 92
           MSRRS    PKLELKLNLSPP S    ++ SPSRSAT SPTSPPSSCVS E+NQD+  ++
Sbjct: 1   MSRRS----PKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDE-PSV 60

Query: 93  RYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVA 150
           RYS+SPE TSMVLVGCPRCLMYVMLSE+DPKCPKCKS+VLLDFLH+    A   + A +
Sbjct: 61  RYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNANANAAAAS 114

[Close]

BLAST of Cp4.1LG08g09880 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 116.3 bits (290), Expect = 2.1e-26
Identity = 67/119 (56.30%), Postives = 80/119 (67.23%), Query Frame = 0


Query: 33  MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 92
           MSRR N + PKLEL+LNLSPP S +   S  RS   S T+ PSSCVS E NQ++   +  
Sbjct: 1   MSRR-NKNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEENETI-- 60

Query: 93  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARK 152
                 TSMVLVGCPRCLMYVMLS++DPKCPKCKS+VLLDFL +    A   + A  R+
Sbjct: 61  ------TSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATTATAANTRR 110

[Close]

BLAST of Cp4.1LG08g09880 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 2.5e-11
Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 44  LELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRYSSSPEATSMVL 103
           L+LKLN+SP    SL++  S S+  S  +                        EA SMV+
Sbjct: 11  LDLKLNISPSLDSSLLTESSSSSLCSEEAE-------------------GGGGEAKSMVV 70

Query: 104 VGCPRCLMYVMLS-ENDPKCPKCKSSVLLDFL 135
           VGCP C+MY++ S ENDP+CP+C S VLLDFL
Sbjct: 71  VGCPNCIMYIITSLENDPRCPRCNSHVLLDFL 83

[Close]

BLAST of Cp4.1LG08g09880 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 4.2e-06
Identity = 24/70 (34.29%), Postives = 39/70 (55.71%), Query Frame = 0


Query: 64  RSATVSPTSPPSSCVSLELNQDDGTALRYSSSPEATSMVLVGCPRCLMYVMLSENDPKCP 123
           RS +   +S  +SC++      +  A  +    EA  MV++GC  C+MYVM+ +   +CP
Sbjct: 30  RSPSSDTSSSQNSCLTRTEEVKEEVASSWVDEEEAPEMVVMGCRSCMMYVMVLQERQRCP 89

Query: 124 KCKSSVLLDF 134
           KCK + L+ F
Sbjct: 90  KCKCTDLIFF 99

[Close]

BLAST of Cp4.1LG08g09880 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.0e-04
Identity = 45/135 (33.33%), Postives = 62/135 (45.93%), Query Frame = 0


Query: 13  LRLPPPSSPPSDFPILKGETMSRRSNGSVPKLELKL---NLSPPRSHSLMS-SPSRSATV 72
           L +PP S      P+L     S   +     LELKL   ++S P    L S SP++S + 
Sbjct: 116 LNVPPISDKFPAKPLL-----SLFDDDDDTSLELKLVPSSISRPLPPPLSSFSPNQSLSY 175

Query: 73  SPTSPPSSCVSLELN------------QDDGTALRYSSSPEATSMVLVGCPRCLMYVMLS 132
             +      V L L             +DDG     +S+  A S V  GCP CL YV ++
Sbjct: 176 LSSVCTLDKVKLALERAEKDTKKRQSPEDDGVYDGTASATVAASQVAAGCPGCLSYVFVA 235

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g09880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNI1	2.2e-36	69.75	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]
Q9SRN4	3.0e-25	56.30	Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1...	[more]
Q9FMS4	3.6e-10	42.39	Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Cp4.1LG08g09880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539011.1	3.66e-78	100.00	uncharacterized protein LOC111799770 [Cucurbita pepo subsp. pepo]	[more]
XP_022958318.1	1.49e-77	99.17	uncharacterized protein LOC111459550 [Cucurbita moschata]	[more]
XP_023005134.1	2.12e-77	99.17	uncharacterized protein LOC111498264 [Cucurbita maxima]	[more]
KAG6596596.1	2.47e-76	98.33	Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma ...	[more]
XP_023528090.1	2.18e-70	80.27	early nodulin-20-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG08g09880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2T2	7.22e-78	99.17	uncharacterized protein LOC111459550 OS=Cucurbita moschata OX=3662 GN=LOC1114595...	[more]
A0A6J1KYB2	1.03e-77	99.17	uncharacterized protein LOC111498264 OS=Cucurbita maxima OX=3661 GN=LOC111498264...	[more]
A0A6J1J6Y2	6.10e-70	80.27	uncharacterized protein LOC111481787 OS=Cucurbita maxima OX=3661 GN=LOC111481787...	[more]
A0A5A7TLW3	5.59e-66	89.26	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B7J8	5.59e-66	89.26	uncharacterized protein LOC103486655 OS=Cucumis melo OX=3656 GN=LOC103486655 PE=...	[more]

BLAST of Cp4.1LG08g09880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06270.1	1.6e-37	69.75	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11600.1	2.1e-26	56.30	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G22270.1	2.5e-11	42.39	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52561.1	4.2e-06	34.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G16500.1	1.0e-04	33.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..79
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 28..147
None	No IPR available	PANTHER	PTHR33177:SF47	BNAC02G02040D PROTEIN	coord: 28..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g09880.1	Cp4.1LG08g09880.1	mRNA