Cp4.1LG08g09700 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g09700
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	E2F_CC-MB domain-containing protein
Location	Cp4.1LG08: 7667637 .. 7668134 (+)
RNA-Seq Expression	Cp4.1LG08g09700
Synteny	Cp4.1LG08g09700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGACATCTCCGCTCTAAAACCACACCCACCGCCGCCGAATCTCCGCCGAAGAAACTCCATCGCGGTGCCCGTCGTTGTGCCATCAAAACTAAACCTTTTCGCCTTCGCCGCCACCAAGTCATCTGGCGGCTCAGCTGCATCGCCGCCATTGGCTTTCGAGCTCTTCCCGATTAAATCCTCCTCCCACTCCCTTACCTACACTTCTCTCAGAGACATTTTGCCATCTTCGACTTCCATGAGCTCCCCCACCGCCGCCTCTGCAGCGAATTCGGGCTTTGAGATCTCGATCCGCAACCGCCTCGTGAAGCAAGCCGCGTGGGCGTATCTTCAACCCATGTCTTCCTCTCCGGGATCATCAGGACCCCACCTCCTCCGCCGTATCTGGCTCAGATTTTCAGCTTGTCTAGGCTTCCTCAACCTGCACATAATTTCTAGTGTGACAAAGGCTTTGGATCGGATATTTCGCGTTGTGGGGTTCAGTTTTGTCTATTAA

mRNA sequence

ATGGATGACATCTCCGCTCTAAAACCACACCCACCGCCGCCGAATCTCCGCCGAAGAAACTCCATCGCGGTGCCCGTCGTTGTGCCATCAAAACTAAACCTTTTCGCCTTCGCCGCCACCAAGTCATCTGGCGGCTCAGCTGCATCGCCGCCATTGGCTTTCGAGCTCTTCCCGATTAAATCCTCCTCCCACTCCCTTACCTACACTTCTCTCAGAGACATTTTGCCATCTTCGACTTCCATGAGCTCCCCCACCGCCGCCTCTGCAGCGAATTCGGGCTTTGAGATCTCGATCCGCAACCGCCTCGTGAAGCAAGCCGCGTGGGCGTATCTTCAACCCATGTCTTCCTCTCCGGGATCATCAGGACCCCACCTCCTCCGCCGTATCTGGCTCAGATTTTCAGCTTGTCTAGGCTTCCTCAACCTGCACATAATTTCTAGTGTGACAAAGGCTTTGGATCGGATATTTCGCGTTGTGGGGTTCAGTTTTGTCTATTAA

Coding sequence (CDS)

ATGGATGACATCTCCGCTCTAAAACCACACCCACCGCCGCCGAATCTCCGCCGAAGAAACTCCATCGCGGTGCCCGTCGTTGTGCCATCAAAACTAAACCTTTTCGCCTTCGCCGCCACCAAGTCATCTGGCGGCTCAGCTGCATCGCCGCCATTGGCTTTCGAGCTCTTCCCGATTAAATCCTCCTCCCACTCCCTTACCTACACTTCTCTCAGAGACATTTTGCCATCTTCGACTTCCATGAGCTCCCCCACCGCCGCCTCTGCAGCGAATTCGGGCTTTGAGATCTCGATCCGCAACCGCCTCGTGAAGCAAGCCGCGTGGGCGTATCTTCAACCCATGTCTTCCTCTCCGGGATCATCAGGACCCCACCTCCTCCGCCGTATCTGGCTCAGATTTTCAGCTTGTCTAGGCTTCCTCAACCTGCACATAATTTCTAGTGTGACAAAGGCTTTGGATCGGATATTTCGCGTTGTGGGGTTCAGTTTTGTCTATTAA

Protein sequence

MDDISALKPHPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSSTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY

Homology

[Close]

BLAST of Cp4.1LG08g09700 vs. NCBI nr
Match: XP_023539526.1 (uncharacterized protein LOC111800166 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311 bits (798), Expect = 1.07e-106
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MDDISALKPHPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK 60
           MDDISALKPHPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK
Sbjct: 1   MDDISALKPHPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK 60

Query: 61  SSSHSLTYTSLRDILPSSTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGS 120
           SSSHSLTYTSLRDILPSSTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGS
Sbjct: 61  SSSHSLTYTSLRDILPSSTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGS 120

Query: 121 SGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY 165
           SGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY
Sbjct: 121 SGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY 165

[Close]

BLAST of Cp4.1LG08g09700 vs. NCBI nr
Match: XP_022957964.1 (uncharacterized protein LOC111459312 [Cucurbita moschata] >KAG6596601.1 hypothetical protein SDJN03_09781, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305 bits (781), Expect = 4.16e-104
Identity = 162/165 (98.18%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MDDISALKPHPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK 60
           MDDISA KP+PPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK
Sbjct: 1   MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK 60

Query: 61  SSSHSLTYTSLRDILPSSTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGS 120
           SSSHSLTYTSLRDILPS TSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGS
Sbjct: 61  SSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGS 120

Query: 121 SGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY 165
           SGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY
Sbjct: 121 SGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY 165

[Close]

BLAST of Cp4.1LG08g09700 vs. NCBI nr
Match: XP_023005655.1 (uncharacterized protein LOC111498593 [Cucurbita maxima])

HSP 1 Score: 303 bits (777), Expect = 1.70e-103
Identity = 160/165 (96.97%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MDDISALKPHPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK 60
           MDDISA KP+PPPPNLRRRNSIAVPVVVPSKLNLFAF+ATKSSGGSAASPPLAFELFP+K
Sbjct: 1   MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFSATKSSGGSAASPPLAFELFPVK 60

Query: 61  SSSHSLTYTSLRDILPSSTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGS 120
           SSSHSLTYTSLRDILPS TSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGS
Sbjct: 61  SSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGS 120

Query: 121 SGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY 165
           SGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY
Sbjct: 121 SGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY 165

[Close]

BLAST of Cp4.1LG08g09700 vs. NCBI nr
Match: XP_008442897.1 (PREDICTED: uncharacterized protein LOC103486660 [Cucumis melo] >KAA0043832.1 putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa] >TYK25301.1 putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa])

HSP 1 Score: 234 bits (598), Expect = 3.54e-76
Identity = 136/170 (80.00%), Postives = 143/170 (84.12%), Query Frame = 0


Query: 1   MDDISALKPHPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPL--AFELFP 60
           MD+ SALKP PP  NLRRRNSI VPV VPSKLNL A  ATK S G+ ASPPL  AFEL P
Sbjct: 1   MDETSALKPDPPFSNLRRRNSITVPVAVPSKLNLLA--ATKPSRGAEASPPLPLAFELVP 60

Query: 61  IKSSSH----SLTYTSLRDILPSSTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPM 120
           IKSSS     SL YTSLRDILPS+T+ SSPTAASAANSG+EISIRNRLVKQAAWAYLQPM
Sbjct: 61  IKSSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPM 120

Query: 121 SSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFV 164
           SSSPGSSGPHLLRRIWLRFSACL FLNL IISS+T A DRIFRVVG +FV
Sbjct: 121 SSSPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of Cp4.1LG08g09700 vs. NCBI nr
Match: XP_011652026.1 (uncharacterized protein LOC105434978 [Cucumis sativus] >KGN59184.1 hypothetical protein Csa_001918 [Cucumis sativus])

HSP 1 Score: 231 bits (590), Expect = 5.85e-75
Identity = 135/170 (79.41%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MDDISALKPHPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFP 60
           MDD SALKP  P  NLRRRNSI VPV VPSKLNL A  ATKSS G+ ASP  PLAFEL P
Sbjct: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLA--ATKSSRGAEASPRLPLAFELVP 60

Query: 61  IKSSSH----SLTYTSLRDILPSSTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPM 120
           IKSSS     SL YTSL+DILPS T+ SSPTA SAANSG+EISIRNRLVKQAAWAYLQPM
Sbjct: 61  IKSSSSESSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPM 120

Query: 121 SSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFV 164
           SSSPGSSGPHLLRRIWLRFSACL FLNL IISS+T A DRIFRVVG +FV
Sbjct: 121 SSSPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of Cp4.1LG08g09700 vs. ExPASy TrEMBL
Match: A0A6J1H3M0 (uncharacterized protein LOC111459312 OS=Cucurbita moschata OX=3662 GN=LOC111459312 PE=4 SV=1)

HSP 1 Score: 305 bits (781), Expect = 2.02e-104
Identity = 162/165 (98.18%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MDDISALKPHPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK 60
           MDDISA KP+PPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK
Sbjct: 1   MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK 60

Query: 61  SSSHSLTYTSLRDILPSSTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGS 120
           SSSHSLTYTSLRDILPS TSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGS
Sbjct: 61  SSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGS 120

Query: 121 SGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY 165
           SGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY
Sbjct: 121 SGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY 165

[Close]

BLAST of Cp4.1LG08g09700 vs. ExPASy TrEMBL
Match: A0A6J1KY03 (uncharacterized protein LOC111498593 OS=Cucurbita maxima OX=3661 GN=LOC111498593 PE=4 SV=1)

HSP 1 Score: 303 bits (777), Expect = 8.21e-104
Identity = 160/165 (96.97%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MDDISALKPHPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK 60
           MDDISA KP+PPPPNLRRRNSIAVPVVVPSKLNLFAF+ATKSSGGSAASPPLAFELFP+K
Sbjct: 1   MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFSATKSSGGSAASPPLAFELFPVK 60

Query: 61  SSSHSLTYTSLRDILPSSTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGS 120
           SSSHSLTYTSLRDILPS TSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGS
Sbjct: 61  SSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGS 120

Query: 121 SGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY 165
           SGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY
Sbjct: 121 SGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY 165

[Close]

BLAST of Cp4.1LG08g09700 vs. ExPASy TrEMBL
Match: A0A5A7TKK1 (Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004370 PE=4 SV=1)

HSP 1 Score: 234 bits (598), Expect = 1.72e-76
Identity = 136/170 (80.00%), Postives = 143/170 (84.12%), Query Frame = 0


Query: 1   MDDISALKPHPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPL--AFELFP 60
           MD+ SALKP PP  NLRRRNSI VPV VPSKLNL A  ATK S G+ ASPPL  AFEL P
Sbjct: 1   MDETSALKPDPPFSNLRRRNSITVPVAVPSKLNLLA--ATKPSRGAEASPPLPLAFELVP 60

Query: 61  IKSSSH----SLTYTSLRDILPSSTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPM 120
           IKSSS     SL YTSLRDILPS+T+ SSPTAASAANSG+EISIRNRLVKQAAWAYLQPM
Sbjct: 61  IKSSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPM 120

Query: 121 SSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFV 164
           SSSPGSSGPHLLRRIWLRFSACL FLNL IISS+T A DRIFRVVG +FV
Sbjct: 121 SSSPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of Cp4.1LG08g09700 vs. ExPASy TrEMBL
Match: A0A1S3B6B1 (uncharacterized protein LOC103486660 OS=Cucumis melo OX=3656 GN=LOC103486660 PE=4 SV=1)

HSP 1 Score: 234 bits (598), Expect = 1.72e-76
Identity = 136/170 (80.00%), Postives = 143/170 (84.12%), Query Frame = 0


Query: 1   MDDISALKPHPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPL--AFELFP 60
           MD+ SALKP PP  NLRRRNSI VPV VPSKLNL A  ATK S G+ ASPPL  AFEL P
Sbjct: 1   MDETSALKPDPPFSNLRRRNSITVPVAVPSKLNLLA--ATKPSRGAEASPPLPLAFELVP 60

Query: 61  IKSSSH----SLTYTSLRDILPSSTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPM 120
           IKSSS     SL YTSLRDILPS+T+ SSPTAASAANSG+EISIRNRLVKQAAWAYLQPM
Sbjct: 61  IKSSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPM 120

Query: 121 SSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFV 164
           SSSPGSSGPHLLRRIWLRFSACL FLNL IISS+T A DRIFRVVG +FV
Sbjct: 121 SSSPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of Cp4.1LG08g09700 vs. ExPASy TrEMBL
Match: A0A0A0LE45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778400 PE=4 SV=1)

HSP 1 Score: 231 bits (590), Expect = 2.83e-75
Identity = 135/170 (79.41%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MDDISALKPHPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFP 60
           MDD SALKP  P  NLRRRNSI VPV VPSKLNL A  ATKSS G+ ASP  PLAFEL P
Sbjct: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLA--ATKSSRGAEASPRLPLAFELVP 60

Query: 61  IKSSSH----SLTYTSLRDILPSSTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPM 120
           IKSSS     SL YTSL+DILPS T+ SSPTA SAANSG+EISIRNRLVKQAAWAYLQPM
Sbjct: 61  IKSSSSESSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPM 120

Query: 121 SSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFV 164
           SSSPGSSGPHLLRRIWLRFSACL FLNL IISS+T A DRIFRVVG +FV
Sbjct: 121 SSSPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of Cp4.1LG08g09700 vs. TAIR 10
Match: AT5G06280.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 67.8 bits (164), Expect = 9.4e-12
Identity = 58/143 (40.56%), Postives = 74/143 (51.75%), Query Frame = 0


Query: 12  PPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAF--ELFPIKSSSHSLTYT 71
           P   LRR  SI+         N+      +     A++PP +F  EL  +K SS  + YT
Sbjct: 9   PATQLRRTKSIS---------NMTTLTPPEVPFDIASTPPSSFDYELISVKPSSF-VAYT 68

Query: 72  SLRDI----------LPSSTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQP--MSSS 131
           SLRDI          LPS     SP  ++AA    +ISIRNRLVKQAA +YLQP  ++SS
Sbjct: 69  SLRDIISSPINSSLNLPSINGSCSPVISTAAG---DISIRNRLVKQAALSYLQPTVLTSS 128

Query: 132 PGSSGPHLLRRIWLRFSACLGFL 141
             S+G    RR+WL  SA   FL
Sbjct: 129 DDSAGSQFFRRVWLHLSAGFQFL 138

[Close]

BLAST of Cp4.1LG08g09700 vs. TAIR 10
Match: AT5G06280.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 67.8 bits (164), Expect = 9.4e-12
Identity = 58/143 (40.56%), Postives = 74/143 (51.75%), Query Frame = 0


Query: 12  PPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAF--ELFPIKSSSHSLTYT 71
           P   LRR  SI+         N+      +     A++PP +F  EL  +K SS  + YT
Sbjct: 9   PATQLRRTKSIS---------NMTTLTPPEVPFDIASTPPSSFDYELISVKPSSF-VAYT 68

Query: 72  SLRDI----------LPSSTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQP--MSSS 131
           SLRDI          LPS     SP  ++AA    +ISIRNRLVKQAA +YLQP  ++SS
Sbjct: 69  SLRDIISSPINSSLNLPSINGSCSPVISTAAG---DISIRNRLVKQAALSYLQPTVLTSS 128

Query: 132 PGSSGPHLLRRIWLRFSACLGFL 141
             S+G    RR+WL  SA   FL
Sbjct: 129 DDSAGSQFFRRVWLHLSAGFQFL 138

[Close]

BLAST of Cp4.1LG08g09700 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.1 bits (157), Expect = 6.1e-11
Identity = 53/116 (45.69%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 47  AASPPLAFELFPIKSSSHS--LTYTSLRDILP-SSTSMSSPT---AASAANSGFEISIRN 106
           A S  L  EL  +  SS      YTSL+DILP SST++ SP    A ++A SG  I+IRN
Sbjct: 18  AVSQTLDLELVSVNKSSEDPLPCYTSLKDILPSSSTTVDSPAISFAVASAVSGPTITIRN 77

Query: 107 RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIF 157
           RLVKQAA +YLQP + +P SS P  LRR+   F        + ++S+   AL RIF
Sbjct: 78  RLVKQAACSYLQPSTPTP-SSNPSFLRRVSSSF--------IRLVSAFFDALLRIF 124

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g09700 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG08g09700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539526.1	1.07e-106	100.00	uncharacterized protein LOC111800166 [Cucurbita pepo subsp. pepo]	[more]
XP_022957964.1	4.16e-104	98.18	uncharacterized protein LOC111459312 [Cucurbita moschata] >KAG6596601.1 hypothet...	[more]
XP_023005655.1	1.70e-103	96.97	uncharacterized protein LOC111498593 [Cucurbita maxima]	[more]
XP_008442897.1	3.54e-76	80.00	PREDICTED: uncharacterized protein LOC103486660 [Cucumis melo] >KAA0043832.1 put...	[more]
XP_011652026.1	5.85e-75	79.41	uncharacterized protein LOC105434978 [Cucumis sativus] >KGN59184.1 hypothetical ...	[more]

BLAST of Cp4.1LG08g09700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3M0	2.02e-104	98.18	uncharacterized protein LOC111459312 OS=Cucurbita moschata OX=3662 GN=LOC1114593...	[more]
A0A6J1KY03	8.21e-104	96.97	uncharacterized protein LOC111498593 OS=Cucurbita maxima OX=3661 GN=LOC111498593...	[more]
A0A5A7TKK1	1.72e-76	80.00	Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3B6B1	1.72e-76	80.00	uncharacterized protein LOC103486660 OS=Cucumis melo OX=3656 GN=LOC103486660 PE=...	[more]
A0A0A0LE45	2.83e-75	79.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778400 PE=4 SV=1	[more]

BLAST of Cp4.1LG08g09700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06280.1	9.4e-12	40.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G06280.3	9.4e-12	40.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52520.1	6.1e-11	45.69	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34569:SF2	EXPRESSED PROTEIN	coord: 8..155
None	No IPR available	PANTHER	PTHR34569	EXPRESSED PROTEIN	coord: 8..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g09700.1	Cp4.1LG08g09700.1	mRNA