Cp4.1LG08g08850 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAGGCCGAGGAAACTCATCATCTTGGGCCCGAAGTGGGCTCGAGTTTTCTTCTGCAGCGATGATCCGAACTGTTTCGGTCTTGCTTCTTGGTTAGCCGATTGACGAAGCCGAAATTCGATACTTGGCGAGCACAAAGCACGATTTTATTGGCAACCAATCCAAAGATCTTCTTGTTTTCGCGATTGATTACAGGTACAATTTAAGTTTCTTTTTCTGTCTCTAAATTTCCTTTTTGCGTCCACCGATTGATCTAAATATCGTAACACACTGATGGAAAATTATGATTACACTGCGCTTGAGGAGAGTTTTGAAAGATTTTTGTATATCTGCATTGGATACGCGAGATTCTGTGGAAAAATTCAATTCCAGTTTGGAGTTTTTGATTCTCAGTTTTTTTGGCTTCTTTTACTCTGAATCAAGCATGAATTATTCCGAAAATGGCTGGATATGTTTAGTTCTATTATTCCAAACTTTTCAAGGACGATAATTTTAGCTACCAAATCGTGTTTTGCTTGCGCGTCGAGCGGCAATCTGTTATCAAGCATTAGATCGTAGATAATGATCATCTTGCAAAGTTTGGGATTACTTTAGGATCATTAATGTGATTTTAACCCGTTAAAATACTTGTAAATACTTAAAATCGTTCCAGACTCACTTGAAGTCATCATCTTTGTTTGGTTTCGCTTCATTCTATTTCATATGCCATTTTCCTTTAGGCAATAGTATGCTAGTTATGAAGTTGTTCGGTATTTCTTCAACAAATTTGCTTGTTCAAGTCGATGCACAAAAGGTGCCTTATCACGAATCTCTTATCATCCAAGATATTTCCAGTACTATGGGTCCTTTCAGTATGGTACTTTATGCTTCTGAAGTTATCATGCCATATGCTGTCTTGTAGCTATAGCTTCACCATACCAATTTTACCTTACAGTTCGATCTGATTCTTGAAAACACGGAAACTTGATTCTACTTTGACATGCTTATTTCCAATCATAATCAACAACAGGAAAAAAATTTAGGAAACTTTATACTAGCTATGGAATGCAAGGCTCGTCTTAGTTTGCAAGTCTCTAGTCTCATTGAACCATTTACACCACTAAAATAGTTATGCATCAATGGAAAGTGGTTAGGCCTGTCATGTTTATGAATCTCTGCGTTAATTTATCTCTTTATGTTATTGATATTGTGCTAAGTTTCTTCCCACCCATCTGAAATTTCTCAGTTATAGAGAGAAATGCATCCATAGGACTCATTTTCAGAGAGCGCAATAGAGAAAATGCAGAAATTGGGAGATTTCAAGCTACCACATTTCTTCAATTACCCTCCATATTTCACGTAATTTCCTTTTCCTGTTTCAGTTACCATGGTTTTTTACATGTTTATTTGCTTAACCAAGTAACTTGGAAGTTGCGAGTCAATTTCTGAAGATGTTGATCTCTTGGTTTTGATTGCTTTTCCCTGAGTGAATAAAACCAACACTTCATTGCTCAGCCAGTAGTTATGCAACAATAACAGGGTTCTGGATCACTTATGCTTCTCCGTTTGCCTCATAAGAATGAATCTGATAATTTTTTTTTCCATAAAAAATGAATTTGGTAATTCTACCTTGCTGCAATTCTGAAATTGTTATTGATAACTTCGACTGTTTCACTTTATATCAAGCTTGTCATGTCTTAAGTTTCACTTATAATCTTGTATTGCATGTCTTATCAGTTTGCAACCGGTGAAGGACACCCGTGAGAAGCAAATTCAACTTTGGAAGGAACTTATTCTCGACTACTGCCGAACACAAAAGATATTTGTCATTGGACTCGAGGAGGAATTTCCTCTATTTTCAAATTCTGTCATTGAGAGTAAATTCCTGAACTTGTTTGGTCCTCATTGACCGTTAAGACTTTTGGTACATGCATTAATATCAACGCTAATGAAGTCATTCACAGTTGCATCATGAACAGTGTGAAAAACATTAAGATATTGGCTTCATTATATGAAACCTTTTCATTCTATGGAGCATAGTACATTGGACTTGGTGTTTAGAACTCTCAGTCATGGATCTATGTTCTACTATTCAGTTGTTTGATGTATTTTACAGTGTGGTTGTGATGCTACAGGATCTCTCAGTCATGAAGCTAGAGTAGTTTTTCTCTCTGCCTTAGTTTCAGATGGTTAGTCCGTTCTAGTTTTGTTCTATCATTATATTTGTTTACAGTTTCCATTTATTCCCAAAACTGATAAATTGTTACTTTAATTGTCCAATAGGTCGTGCAGAATGGCTGGATAAGGGACATAGGAAATGTCTTATTTTGTGGCACCGGATTCAAGATTGGGCTGACATCATTTTGCACTTTGTAAGACTAAATACTTTGTTAACTCTCATAGTTATGTTAAAGTTGATTGGTTTAGGGTGGAGTTTGGAATGATTTTTGAAAGGGTAATAAATGCTATTATCCTATTAAAGCTGTTTTCAAAGTATTCTAGTCTTCTGGTTGCATTTGGATTTGATTAGGAGGAAATTTTAACATTCTTTAATGTTGACTGATTATAAATTAAGCTAAAGAAAATACCTTTTCAGTTGTGTTGGTTTGTAAAATTTTGTTAAGCGCATCTTTTGACTTCTCAAAGAGTTTGATGCCTCTACTGACGAACTCTTGAAAATCCTTTTTACCCATATTTTTCCACATTTCCACACTTATTTACTTTATATTACAACTGATTTTTTTTAATAAAGAAATTAAAACAATTATTTCAAAAACTACAACAATTATTTTAAAGAAGGACAACATTCTCAAATTGAGCCTGTTTGGAAAGATTGTTCGAGTAATTATGAACATTTTTGTAACACTTAAAATCCAAATCATTCCAAACAAACTCTATTCCAGGGGTGCTTTGAAAAATTCTTATGCAATTGCCTTATTAAATAGGTGAAAAACAATGGACTTGAAGATAGTGTTATGACAGTTGAGGAAATACGTTCAGGAGTTGAGTCCAGAGGAACAGGTACTTTCCTTGCTTCTACTGAGGCGATTTAGATCTTCCAATGATTTCTAAATCTATTTTTAATTTGCTACATTGATATTCGTATTAAAGCAACTCTAGTTGGCTATCCCTCAGGTGTTATTTTGTTTAATTGGAGCCTGATTTTATTTTAGTTTGGCTTCTTTTGTTTGGGGTTAATTTCTTCTTGTACCTTCTTGCATTTTTTAATACTTTTTCTCAATGAAAGTTCACTTCCCTCAAAAAGTAAAAAGAAAAAAAGGGGGGAAAAAGATGATGGAAAACATCTTGGTGCTTAATAAATCCAAGAAACTTGGCTCAAGGGGAAATGTAACACTGGCAAAACTGATATGAACAATTAGTTGGGGCGTAGGTCCTANAATTTTACTTCCCCACCTAGCTACTCTAGGTTGGGGCGTAGGTCCTGGTGGGGAAGTTATAGACACCTTTCCGTACTTTGTGTCTGGAGTACTTCACTTAATTTCCTCCGCAGTATTGGGTTTTGGCGGTATTTATCATGCACTTCTGGGACCCGAGACCCTTGAAGAATCTTTTCCATTCTTCGGTTATGTGTGGAAAGATAGAAATAAAATGACTACCATTTTGGGTATTCACTTAATTTTGTTAGGTATAGGTGCTTTTCTTCTAGTATTCAAAGCTCTTTATTTTGGGGGCGTATATGATACCTGGGCTCCGGGGGGGGGAGATGTAAGAAAAATTACCAACTTGACCCTTAGCCCAAGTGTTATATTTGGTTATTTACTAAAATCTCCTTTTGGGGGAGAAGGATGGATTGTTAGTGTGGACGATTTGGAAGATATAGTTGGGGGGCATGTATGGTTAGGTTCCATTTGTATACTTGGTGGAATTTGGCATATCTTAACTAAACCGTTTGCATGGGCTCGCCGCGCACTTGTATGGTCTGGTTTAGTTTAAGTCTCATTTTATTTGTAAACTTTTAAACCTGTCAACTTAAGATATACCGGAGCCATTAATATAGATAACTTTCTCCTTACATTCATATTCAAAAGAAAAACAAAAAGGTATTGAAGATAGAAGTTTAATAACTCAGATCACTTACTTTTTATGGGCAAACAAATTAGTTACGTAGATGAGAGTCAGAAAATCATTATTTGAATAAGAAGGAATGTCAGGGAATAGAATCAAAGGTTCTGGAATTGTACTAGTTTTTGCTTTCATTTCCTCTCTAGTGTAAAAGAATATCTGATTCTGGTTCTGGAAGCCACACACAAGAAAGAAACTTTTCTTATATTTGTAAATGTCTACTTTGGTTTCTTTGGTCCTTGCCGATCGATAGATTATATTTAACAAATTTGATGCCAAATGAAGTGGATGAGACTCGAAGCATGAACTTAACTCATGCTGAGTCATGTAAGAGTTTGGTTAAATTCTCTAAAAAGGTTCATAGTAAAGACAAATAATCTTTTACACAAAATTCATGAATCAAATAGGATTATGCTTTTGATACTTGCATTACTAAATGTTTACATCCTTTAATCACATTGAAGCCTTATTTGTGCAAACCAATACGTTTATTTTTCAGAGCTTCAAGGGATTGACCGTACGATTTTAATGAGAGCATTGAAGCAACTTGAACAGAAGGGAAAGCTTGCAATTTTCAAGGGTTCTTCAACAGACGATGAAGGCATTAAATTCTCTGTATGACTCCAAAATCGAACGGCCTCAATGTGAATTTTCCAGTTCAATCTTCTTCTAAATGATACTCATCTGTAGTTTCCCTGCCTATTCAAACTGGGATTGTGAAGAGTTCTTCTTGCCAAAGTTTTGGTGCAGCATTTCAGTGTAGTAATGTAACCAATAAGTAAAGAGCCTTCAAGTAGAACTCAAGAAACTATGCTTGGAAGTGCTTTGGAAGGATATGGTATTTTGTGTAGCCTTTTGAAGTTCTTTTAAATGTATTTTTATTATCAGTTGGAATGATTTGAATAGTAACAAGATTAGAAGTGGGAATTGGGGAACTGTAATTCTGCTAAGTAAATGGTTATATCAATTATTTTATCCTAAAAAATTGATTTATTTGGATTTTGTTTTGTAGTTATTTGATTTTTTATTTTTAAAAAATATTGCTTGT AGAGGCCGAGGAAACTCATCATCTTGGGCCCGAAGTGGGCTCGAGTTTTCTTCTGCAGCGATGATCCGAACTGTTTCGGTCTTGCTTCTTGGTTAGCCGATTGACGAAGCCGAAATTCGATACTTGGCGAGCACAAAGCACGATTTTATTGGCAACCAATCCAAAGATCTTCTTGTTTTCGCGATTGATTACAGTTATAGAGAGAAATGCATCCATAGGACTCATTTTCAGAGAGCGCAATAGAGAAAATGCAGAAATTGGGAGATTTCAAGCTACCACATTTCTTCAATTACCCTCCATATTTCACTTTGCAACCGGTGAAGGACACCCGTGAGAAGCAAATTCAACTTTGGAAGGAACTTATTCTCGACTACTGCCGAACACAAAAGATATTTGTCATTGGACTCGAGGAGGAATTTCCTCTATTTTCAAATTCTGTCATTGAGAGATCTCTCAGTCATGAAGCTAGAGTAGTTTTTCTCTCTGCCTTAGTTTCAGATGGTCGTGCAGAATGGCTGGATAAGGGACATAGGAAATGTCTTATTTTGTGGCACCGGATTCAAGATTGGGCTGACATCATTTTGCACTTTGTGAAAAACAATGGACTTGAAGATAGTGTTATGACAGTTGAGGAAATACGTTCAGGAGTTGAGTCCAGAGGAACAGAGCTTCAAGGGATTGACCGTACGATTTTAATGAGAGCATTGAAGCAACTTGAACAGAAGGGAAAGCTTGCAATTTTCAAGGGTTCTTCAACAGACGATGAAGGCATTAAATTCTCTGTATGACTCCAAAATCGAACGGCCTCAATGTGAATTTTCCAGTTCAATCTTCTTCTAAATGATACTCATCTGTAGTTTCCCTGCCTATTCAAACTGGGATTGTGAAGAGTTCTTCTTGCCAAAGTTTTGGTGCAGCATTTCAGTGTAGTAATGTAACCAATAAGTAAAGAGCCTTCAAGTAGAACTCAAGAAACTATGCTTGGAAGTGCTTTGGAAGGATATGGTATTTTGTGTAGCCTTTTGAAGTTCTTTTAAATGTATTTTTATTATCAGTTGGAATGATTTGAATAGTAACAAGATTAGAAGTGGGAATTGGGGAACTGTAATTCTGCTAAGTAAATGGTTATATCAATTATTTTATCCTAAAAAATTGATTTATTTGGATTTTGTTTTGTAGTTATTTGATTTTTTATTTTTAAAAAATATTGCTTGT ATGCAGAAATTGGGAGATTTCAAGCTACCACATTTCTTCAATTACCCTCCATATTTCACTTTGCAACCGGTGAAGGACACCCGTGAGAAGCAAATTCAACTTTGGAAGGAACTTATTCTCGACTACTGCCGAACACAAAAGATATTTGTCATTGGACTCGAGGAGGAATTTCCTCTATTTTCAAATTCTGTCATTGAGAGATCTCTCAGTCATGAAGCTAGAGTAGTTTTTCTCTCTGCCTTAGTTTCAGATGGTCGTGCAGAATGGCTGGATAAGGGACATAGGAAATGTCTTATTTTGTGGCACCGGATTCAAGATTGGGCTGACATCATTTTGCACTTTGTGAAAAACAATGGACTTGAAGATAGTGTTATGACAGTTGAGGAAATACGTTCAGGAGTTGAGTCCAGAGGAACAGAGCTTCAAGGGATTGACCGTACGATTTTAATGAGAGCATTGAAGCAACTTGAACAGAAGGGAAAGCTTGCAATTTTCAAGGGTTCTTCAACAGACGATGAAGGCATTAAATTCTCTGTATGA MQKLGDFKLPHFFNYPPYFTLQPVKDTREKQIQLWKELILDYCRTQKIFVIGLEEEFPLFSNSVIERSLSHEARVVFLSALVSDGRAEWLDKGHRKCLILWHRIQDWADIILHFVKNNGLEDSVMTVEEIRSGVESRGTELQGIDRTILMRALKQLEQKGKLAIFKGSSTDDEGIKFSV Homology
BLAST of Cp4.1LG08g08850 vs. ExPASy Swiss-Prot
Match: Q8VZC9 (Vacuolar protein sorting-associated protein 25 OS=Arabidopsis thaliana OX=3702 GN=VPS25 PE=1 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 2.5e-87 Identity = 152/179 (84.92%), Postives = 167/179 (93.30%), Query Frame = 0
BLAST of Cp4.1LG08g08850 vs. ExPASy Swiss-Prot
Match: Q6AX45 (Vacuolar protein-sorting-associated protein 25 OS=Xenopus laevis OX=8355 GN=vps25 PE=2 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.9e-34 Identity = 71/173 (41.04%), Postives = 106/173 (61.27%), Query Frame = 0
BLAST of Cp4.1LG08g08850 vs. ExPASy Swiss-Prot
Match: Q6NWF4 (Vacuolar protein-sorting-associated protein 25 OS=Danio rerio OX=7955 GN=vps25 PE=2 SV=2) HSP 1 Score: 143.7 bits (361), Expect = 2.1e-33 Identity = 70/173 (40.46%), Postives = 107/173 (61.85%), Query Frame = 0
BLAST of Cp4.1LG08g08850 vs. ExPASy Swiss-Prot
Match: Q55GD9 (Vacuolar protein-sorting-associated protein 25 OS=Dictyostelium discoideum OX=44689 GN=vps25 PE=1 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 6.2e-30 Identity = 68/188 (36.17%), Postives = 113/188 (60.11%), Query Frame = 0
BLAST of Cp4.1LG08g08850 vs. ExPASy Swiss-Prot
Match: Q9CQ80 (Vacuolar protein-sorting-associated protein 25 OS=Mus musculus OX=10090 GN=Vps25 PE=1 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 5.3e-29 Identity = 65/173 (37.57%), Postives = 99/173 (57.23%), Query Frame = 0
BLAST of Cp4.1LG08g08850 vs. NCBI nr
Match: XP_023540532.1 (vacuolar protein sorting-associated protein 25 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 365 bits (938), Expect = 1.38e-127 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of Cp4.1LG08g08850 vs. NCBI nr
Match: XP_022949655.1 (vacuolar protein sorting-associated protein 25 [Cucurbita moschata] >XP_023005573.1 vacuolar protein sorting-associated protein 25 [Cucurbita maxima] >KAG6596709.1 Vacuolar protein sorting-associated protein 25, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 364 bits (934), Expect = 5.61e-127 Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of Cp4.1LG08g08850 vs. NCBI nr
Match: XP_008448627.1 (PREDICTED: vacuolar protein sorting-associated protein 25 isoform X1 [Cucumis melo] >KAA0053011.1 vacuolar protein sorting-associated protein 25 isoform X1 [Cucumis melo var. makuwa] >TYK11467.1 vacuolar protein sorting-associated protein 25 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 357 bits (915), Expect = 4.43e-124 Identity = 174/179 (97.21%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of Cp4.1LG08g08850 vs. NCBI nr
Match: XP_004146105.1 (vacuolar protein sorting-associated protein 25 [Cucumis sativus] >KGN55713.1 hypothetical protein Csa_009640 [Cucumis sativus]) HSP 1 Score: 355 bits (910), Expect = 2.57e-123 Identity = 172/179 (96.09%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of Cp4.1LG08g08850 vs. NCBI nr
Match: XP_038891553.1 (vacuolar protein sorting-associated protein 25 [Benincasa hispida]) HSP 1 Score: 353 bits (907), Expect = 7.36e-123 Identity = 171/179 (95.53%), Postives = 175/179 (97.77%), Query Frame = 0
BLAST of Cp4.1LG08g08850 vs. ExPASy TrEMBL
Match: A0A6J1L2J9 (vacuolar protein sorting-associated protein 25 OS=Cucurbita maxima OX=3661 GN=LOC111498518 PE=3 SV=1) HSP 1 Score: 364 bits (934), Expect = 2.72e-127 Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of Cp4.1LG08g08850 vs. ExPASy TrEMBL
Match: A0A6J1GDD3 (vacuolar protein sorting-associated protein 25 OS=Cucurbita moschata OX=3662 GN=LOC111452977 PE=3 SV=1) HSP 1 Score: 364 bits (934), Expect = 2.72e-127 Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of Cp4.1LG08g08850 vs. ExPASy TrEMBL
Match: A0A5A7UHJ5 (Vacuolar protein sorting-associated protein 25 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001240 PE=3 SV=1) HSP 1 Score: 357 bits (915), Expect = 2.15e-124 Identity = 174/179 (97.21%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of Cp4.1LG08g08850 vs. ExPASy TrEMBL
Match: A0A1S3BKR8 (vacuolar protein sorting-associated protein 25 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490745 PE=3 SV=1) HSP 1 Score: 357 bits (915), Expect = 2.15e-124 Identity = 174/179 (97.21%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of Cp4.1LG08g08850 vs. ExPASy TrEMBL
Match: A0A0A0L1R7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006740 PE=3 SV=1) HSP 1 Score: 355 bits (910), Expect = 1.24e-123 Identity = 172/179 (96.09%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of Cp4.1LG08g08850 vs. TAIR 10
Match: AT4G19003.2 (E2F/DP family winged-helix DNA-binding domain ) HSP 1 Score: 322.8 bits (826), Expect = 1.8e-88 Identity = 152/179 (84.92%), Postives = 167/179 (93.30%), Query Frame = 0
BLAST of Cp4.1LG08g08850 vs. TAIR 10
Match: AT4G19003.1 (E2F/DP family winged-helix DNA-binding domain ) HSP 1 Score: 322.8 bits (826), Expect = 1.8e-88 Identity = 152/179 (84.92%), Postives = 167/179 (93.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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