Cp4.1LG08g08390 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g08390
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein CWC15 homolog
Location	Cp4.1LG08: 6686866 .. 6690918 (-)
RNA-Seq Expression	Cp4.1LG08g08390
Synteny	Cp4.1LG08g08390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATCGAGCTAGGGTTTTCTCTGGTTTGTGTGACTGCTTTTTCGTTCTTGTTTTACGAATCTAAAGAACCGTTTTCCATTTTCTTTGCGTTTGAAGGGCCGAGGAGACGAGGAAAAAGTCTAGAGATGACTACTGCAGCTCGACCCACATGGGCACCGGCTAAAGGTGGAAATGAACAAGGTGGAACTCGAATTTTTGGCCCATCACAGAAATATTCCTCCAGAGATATCGCTTCTCATACGACCTTGAAGCCCAGGTGCGTGTATTTAAGAAATGTAATTGTTAGTTGTATGTGGCTGAGGGTGCACTTACTATAGTTTGTTGATTGCGTTTGTTCATTAAATTTTCGTAATGTTGTGTTCTTTGTACAAAGTCTGTCGTTCTTGGTTTTGTTTAATCGTCTATGTGTTGCGACTTCTGAGGGATAATGATTGTACATCCATAATGAACTCGTTGGGGTCTTTGTTTATGATGTGCACTGAGTTTTCTAGTGAGTGTAATGTTCTTAAACTGGAATTCTGAGAACTAAATTGGTTTAATGTGGATGTGATTTGTTGGACAGAATCTTCATTCATTTTACTTGATCTTTGCGAAGGTGAACTTTTTTTGGATTGTTGGATATTGATGTTTCCACTTCTTGGATTATGTTAATGGCCCGTACCCACCAATTCTCAAGGAACTTTGCTTACTCTTAGGTTTAACTCCTGGAGACAACAAGGGTTTTTGTACATTAAAGTTTCGCCTTATGGTTGAACTAAACTTTTGGGAGAGTCTCTCTAACGTCCCGAGTCCTTACCTCTAGGATCACCGTGGGTGTTAAGCCAAGGTGAAACTTAGAATGATTTTAATTAATTGGCTTTCATTGCTGGTTATCCCCATTTATTTTTCTTCACTAAGCAGGGTAATGACCAATTTAATACATAGTATAATTCCTCTAACTCTGTAGATGAATTTCTATTGGTATGAACGAAATTATAGAAGGGGATTTAAGGGAGTTACAAAAAAATAAAACGTTTTCATTGGTGTGTATGGAAGTTAAAGGAAAGAATTGAAGGTAAGATTTGACTTAGTATTCCATGAGGTGTTTGAAGGGACAATTGAATCCAAGATTTGAGAAATGGTTCTTTTTTTTGAAGTTATAGATTCTTCTTTTACATTCCAACCATATATGTCATAGACTTCCAGGATAAATGTCAGCATTCAGTCATAGAATTTCTCTTTAGTGATCATATAGAAAATTGATGAACATTTAATGAATCAAGTGAGAAAAGGGAAAATTGAATTGGAAAAGGTTGAAGATGAAGCCCCCAAAGCTTGACCATGTATTCCACCACTATTCTTGCAAAAACAGCTATAGCTGGAGCTGCTGGAATTGAAATTGGCAGAGTCATTGGAGTGTCTCTTTTGGGATCTTGTTATTTTGGCTTAAACCTCCAAGCCGAAGGCGCTGTTTACCGTCCAGGAAGGAAGGACTTCCATAACATTATACTAAAGGCAAGGAGGAGCTCTGGTTTGCCCTCAGTGAGATGATCGAAGAAAGATTTAATTTTTTCCCTCCACAAACTTTGCAATAAGTTACATTCTTGCCTATCCCTTCTATCTAACCATTCAATGAATCCTTCACAAACGTCATGAGCAGCTTTAAAGTCTCTGTATTGGAGAAGAGACTGCCATCAAAAAGCTCACACAATCATAGTTAATCTGTTACTTTAACCTATTATTACAAATGAGACATATCAGCCATGTCTCAAAATGAGAATTGACTAATCGATTTATTATCGGCTAATGGCTATTCTTTGTTTTATGTTTCCTTGGATATGGTGTTGTTACTTTTCTTCCATGATTTTAAGTCTCTAATCACTTGTCATTAATGATGCATGTAGGAAGGAAGGACAAGATACCCATGATGAGTTGCAAAGGAGGAATCTCAGGGACGAGTTAGAAGATCGTGAAAGGAGGCATTTCTCATCAAAGAATAAATCATATGGTAAAGACATCCATTCTTTAGAAAAATATAGAATAATTTTTTTTGTTTGTTTTCGTATCATTTCTTATGGTTTTGTTCAAATATCCTTTTTCCATACTGTTGTATGACATGTTTGCAACGAGTTGATCATGTTTCACTTGCATAATTTGCAGATGATAGAGATCATAGAAAAGGAAGCCAACTTCTGTTAGAAGGTTAATTCATCAGTTTCTGTATGCTTACATTTAATAACACATTCACTAATTGTTTACTTAACCAGTTGTTATATATGTTTATTAGGCGGAAAGAGAGATATTGAAGATCGTATTATTCCACGAAGTTTAGATGCTGACGATTCTGATGTGGACGTCAAAAGTGACAACGAGAGGTTGGCTGGTTTGCTGGTTGGCTGGCTTTCCATTTTATTAATATACTAATAAAACTATTTTCCTAGCCTTTTTTCTCTATACTTATTAGAGATAGCTTTAATTGCTTCGGCTTTTTATAATATGAATCCTTGGTCCAAGATCTGGTAGTCTAGTTTGTTTTGGGGTTGAGTATTGAAGTATCTCTAATGTTGAATAGCAGTGATGATGATGAGGATGACGACGACGAGGATGATACTGAAGCTCTTTTGGCTGAGCTGGAACAAATAAAGAAGGAAAGAGCGGAGGAGAAGCTTCGGAAGGTGAGCCTTTTGTCTATCTAGATAGTGTCATGATCTGAAGTTGTGCTTGTAGAACCTTTATTTTTCTCCAAGATTTAAAAAGAATGCACCATGAGTCGAGTGATTAGTAACTGGTATCACTTCGAGTGGTCGAATCTTTTAAGACTAACGAGCTCGGAAATGCAGAGTTTAAATTTGGCTTCATCAGTTGCTTAAATCTTCGTTACGATGTATAGGAAAGACAAGAGCGGGAGGAAGAGCTTAAAGTCAAGGAAGCGGAGTTACTCCGAGGAAATCCACTGCTTAACGAGCAACCCGCCTCTTTTAGTGTCAAAAGAAGGTCAGTTGGTCTAATTTAACCATTTTTTCACAACTACTATGAACATCTATTCTGATGATGCAACTTCCTGTTGGCTTTTGGGTTAGATGGGACGACGATGTTGTGTTCAAGAATCAGGCCCGTGGCGAAACAAAGACTCCTAAGCGCTTTATAAACGATACCATCAGGAACGACTTCCACCGAAAATTCTTGCACAAGTACATGAAGTAACATGGTTATCAAAATCTACTGGCGCTAAAGGATTCAAGTAAGTTCGTGTGGACACTAAAACTGTATATTTGTTTTATCCGCATTACATAATTCGTAGTGTGACCTTCAGGTACCAGCCTCTATGAAATATGCATTGAATATTTTCAGTTTGCCTTCTGAATTAGATGAACTATAAGGATCCAAAACTATGTCAAACGAATGATTATTAAAATGCTTTCATGAGTGTCTTAGCTCATACTTTAATAGCAATAATGATGATTGGTCTCCCAAATATTGGATTGGCTAGGACCCTGTACTTCAAATACTGTAGCCGAGGACCCTGGCTAGGAGAATCCAGACTTCTTGTAAGCCACAGTTCTTTCACCAAATAGAGCTTTTCGAGTTGAAACATGTATACCGCTCTAAAGATCGATGAAAATGTTCAAAATATGTGAATATAGAAGAGTAACCCGATTCGAATAGAAGTCGAGAGATGTTTGCTTAAACTTTTAGGTTTAGTGGAACTTCACCAAATGATTTCAACGATGTAAAATACCGAAACAAAGACCTGGTCTCAGGTTCGGTATCGATTTTGGACTTCGACCAAAGAAATCTCGACCATACTGCAACTTCAACTGCTTGAAATAGCCTTAGCTTGTTAAAGTACTTTGAAGCAATACTCAATTGTATTCACCAGTGTTTTGTCCAATCCTTCCCAACTTGGACAACTAGTTGTAGATGTTCTGGTGACTTTCCAGCTTGGTTCGAGAGAGTCGAAATGGCGATGGATCTTCGGGAAGACTTGTGTTGCGACAGCTTAATGACTCCATTGGGGAATTTAGAGAGTCAAAACACTTGAAATTTTACGAGCTAAATTTTCTTATGAATTT

mRNA sequence

TTTATCGAGCTAGGGTTTTCTCTGGTTTGTGTGACTGCTTTTTCGTTCTTGTTTTACGAATCTAAAGAACCGTTTTCCATTTTCTTTGCGTTTGAAGGGCCGAGGAGACGAGGAAAAAGTCTAGAGATGACTACTGCAGCTCGACCCACATGGGCACCGGCTAAAGGTGGAAATGAACAAGGTGGAACTCGAATTTTTGGCCCATCACAGAAATATTCCTCCAGAGATATCGCTTCTCATACGACCTTGAAGCCCAGGAAGGAAGGACAAGATACCCATGATGAGTTGCAAAGGAGGAATCTCAGGGACGAGTTAGAAGATCGTGAAAGGAGGCATTTCTCATCAAAGAATAAATCATATGATGATAGAGATCATAGAAAAGGAAGCCAACTTCTGTTAGAAGGCGGAAAGAGAGATATTGAAGATCGTATTATTCCACGAAGTTTAGATGCTGACGATTCTGATGTGGACGTCAAAAGTGACAACGAGAGGTTGGCTGGTTTGCTGGAAAGACAAGAGCGGGAGGAAGAGCTTAAAGTCAAGGAAGCGGAGTTACTCCGAGGAAATCCACTGCTTAACGAGCAACCCGCCTCTTTTAGTGTCAAAAGAAGATGGGACGACGATGTTGTGTTCAAGAATCAGGCCCGTGGCGAAACAAAGACTCCTAAGCGCTTTATAAACGATACCATCAGGAACGACTTCCACCGAAAATTCTTGCACAAGTACATGAAGTAACATGGTTATCAAAATCTACTGGCGCTAAAGGATTCAAGACCCTGTACTTCAAATACTGTAGCCGAGGACCCTGGCTAGGAGAATCCAGACTTCTTGTAAGCCACAGTTCTTTCACCAAATAGAGCTTTTCGAGTTGAAACATGTATACCGCTCTAAAGATCGATGAAAATGTTCAAAATATGTGAATATAGAAGAGTAACCCGATTCGAATAGAAGTCGAGAGATGTTTGCTTAAACTTTTAGGTTTAGTGGAACTTCACCAAATGATTTCAACGATGTAAAATACCGAAACAAAGACCTGGTCTCAGGTTCGGTATCGATTTTGGACTTCGACCAAAGAAATCTCGACCATACTGCAACTTCAACTGCTTGAAATAGCCTTAGCTTGTTAAAGTACTTTGAAGCAATACTCAATTGTATTCACCAGTGTTTTGTCCAATCCTTCCCAACTTGGACAACTAGTTGTAGATGTTCTGGTGACTTTCCAGCTTGGTTCGAGAGAGTCGAAATGGCGATGGATCTTCGGGAAGACTTGTGTTGCGACAGCTTAATGACTCCATTGGGGAATTTAGAGAGTCAAAACACTTGAAATTTTACGAGCTAAATTTTCTTATGAATTT

Coding sequence (CDS)

TTTATCGAGCTAGGGTTTTCTCTGGTTTGTGTGACTGCTTTTTCGTTCTTGTTTTACGAATCTAAAGAACCGTTTTCCATTTTCTTTGCGTTTGAAGGGCCGAGGAGACGAGGAAAAAGTCTAGAGATGACTACTGCAGCTCGACCCACATGGGCACCGGCTAAAGGTGGAAATGAACAAGGTGGAACTCGAATTTTTGGCCCATCACAGAAATATTCCTCCAGAGATATCGCTTCTCATACGACCTTGAAGCCCAGGAAGGAAGGACAAGATACCCATGATGAGTTGCAAAGGAGGAATCTCAGGGACGAGTTAGAAGATCGTGAAAGGAGGCATTTCTCATCAAAGAATAAATCATATGATGATAGAGATCATAGAAAAGGAAGCCAACTTCTGTTAGAAGGCGGAAAGAGAGATATTGAAGATCGTATTATTCCACGAAGTTTAGATGCTGACGATTCTGATGTGGACGTCAAAAGTGACAACGAGAGGTTGGCTGGTTTGCTGGAAAGACAAGAGCGGGAGGAAGAGCTTAAAGTCAAGGAAGCGGAGTTACTCCGAGGAAATCCACTGCTTAACGAGCAACCCGCCTCTTTTAGTGTCAAAAGAAGATGGGACGACGATGTTGTGTTCAAGAATCAGGCCCGTGGCGAAACAAAGACTCCTAAGCGCTTTATAAACGATACCATCAGGAACGACTTCCACCGAAAATTCTTGCACAAGTACATGAAGTAA

Protein sequence

FIELGFSLVCVTAFSFLFYESKEPFSIFFAFEGPRRRGKSLEMTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDNERLAGLLERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK

Homology

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BLAST of Cp4.1LG08g08390 vs. ExPASy Swiss-Prot
Match: Q9P013 (Spliceosome-associated protein CWC15 homolog OS=Homo sapiens OX=9606 GN=CWC15 PE=1 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 3.3e-34
Identity = 98/233 (42.06%), Postives = 140/233 (60.09%), Query Frame = 0


Query: 43  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 102
           MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R
Sbjct: 1   MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR 60

Query: 103 DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDAD-------DSD 162
            ELE+RER     KN+    R+H   S +     K+   D+I   +LDAD       D D
Sbjct: 61  RELEERERAAAREKNRDRPTREHTTSSSV----SKKPRLDQIPAANLDADDPLTDEEDED 120

Query: 163 VDVKSDNERLAGLL-----------------ERQEREEELKVKEAELLRGNPLLN----E 222
            + +SD++  A LL                 E++++ EE +++   +L GNPLLN     
Sbjct: 121 FEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTGPS 180

Query: 223 QP-ASFSVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRNDFHRKFLHKYMK 245
           QP A+F VKRRWDDDVVFKN A+G  + K  KRF+NDT+R++FH+KF+ KY+K
Sbjct: 181 QPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK 229

[Close]

BLAST of Cp4.1LG08g08390 vs. ExPASy Swiss-Prot
Match: Q9JHS9 (Spliceosome-associated protein CWC15 homolog OS=Mus musculus OX=10090 GN=Cwc15 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.3e-34
Identity = 98/233 (42.06%), Postives = 140/233 (60.09%), Query Frame = 0


Query: 43  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 102
           MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R
Sbjct: 1   MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR 60

Query: 103 DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDAD-------DSD 162
            ELE+RER     KN+    R+H   S +     K+   D+I   +LDAD       D D
Sbjct: 61  RELEERERAAARDKNRDRPTREHTTSSSV----SKKPRLDQIPAANLDADDPLTDEEDED 120

Query: 163 VDVKSDNERLAGLL-----------------ERQEREEELKVKEAELLRGNPLLN----E 222
            + +SD++  A LL                 E++++ EE +++   +L GNPLLN     
Sbjct: 121 FEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTGPS 180

Query: 223 QP-ASFSVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRNDFHRKFLHKYMK 245
           QP A+F VKRRWDDDVVFKN A+G  + K  KRF+NDT+R++FH+KF+ KY+K
Sbjct: 181 QPQANFKVKRRWDDDVVFKNCAKGIDDQKKDKRFVNDTLRSEFHKKFMEKYIK 229

[Close]

BLAST of Cp4.1LG08g08390 vs. ExPASy Swiss-Prot
Match: Q5RE65 (Spliceosome-associated protein CWC15 homolog OS=Pongo abelii OX=9601 GN=CWC15 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.3e-34
Identity = 98/233 (42.06%), Postives = 140/233 (60.09%), Query Frame = 0


Query: 43  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 102
           MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R
Sbjct: 1   MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR 60

Query: 103 DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDAD-------DSD 162
            ELE+RER     KN+    R+H   S +     K+   D+I   +LDAD       D D
Sbjct: 61  RELEERERAAAREKNRDRPTREHTTSSSV----SKKPRLDQIPAANLDADDPLTDEEDED 120

Query: 163 VDVKSDNERLAGLL-----------------ERQEREEELKVKEAELLRGNPLLN----E 222
            + +SD++  A LL                 E++++ EE +++   +L GNPLLN     
Sbjct: 121 FEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTGPS 180

Query: 223 QP-ASFSVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRNDFHRKFLHKYMK 245
           QP A+F VKRRWDDDVVFKN A+G  + K  KRF+NDT+R++FH+KF+ KY+K
Sbjct: 181 QPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK 229

[Close]

BLAST of Cp4.1LG08g08390 vs. ExPASy Swiss-Prot
Match: Q5BJP2 (Spliceosome-associated protein CWC15 homolog OS=Rattus norvegicus OX=10116 GN=Cwc15 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.3e-34
Identity = 98/233 (42.06%), Postives = 140/233 (60.09%), Query Frame = 0


Query: 43  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 102
           MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R
Sbjct: 1   MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR 60

Query: 103 DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDAD-------DSD 162
            ELE+RER     KN+    R+H   S +     K+   D+I   +LDAD       D D
Sbjct: 61  RELEERERAAAREKNRDRPTREHTTSSSV----SKKPRLDQIPAANLDADDPLTDEEDED 120

Query: 163 VDVKSDNERLAGLL-----------------ERQEREEELKVKEAELLRGNPLLN----E 222
            + +SD++  A LL                 E++++ EE +++   +L GNPLLN     
Sbjct: 121 FEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTGPS 180

Query: 223 QP-ASFSVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRNDFHRKFLHKYMK 245
           QP A+F VKRRWDDDVVFKN A+G  + K  KRF+NDT+R++FH+KF+ KY+K
Sbjct: 181 QPQANFKVKRRWDDDVVFKNCAKGIDDQKKDKRFVNDTLRSEFHKKFMEKYIK 229

[Close]

BLAST of Cp4.1LG08g08390 vs. ExPASy Swiss-Prot
Match: Q2KJD3 (Spliceosome-associated protein CWC15 homolog OS=Bos taurus OX=9913 GN=CWC15 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.7e-34
Identity = 98/235 (41.70%), Postives = 140/235 (59.57%), Query Frame = 0


Query: 43  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 102
           MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R
Sbjct: 1   MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR 60

Query: 103 DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDAD---------D 162
            ELE+RER     KN+    R+H   S +     K+   D+I   +LDAD         D
Sbjct: 61  RELEERERAAAREKNRDRPTREHTTSSSV----SKKPRLDQIPAANLDADDPLTDEEDED 120

Query: 163 SDVDVKSDNERLAGLL-----------------ERQEREEELKVKEAELLRGNPLLN--- 222
            D + +SD++  A LL                 E++++ EE +++   +L GNPLLN   
Sbjct: 121 EDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTG 180

Query: 223 -EQP-ASFSVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRNDFHRKFLHKYMK 245
             QP A+F VKRRWDDDVVFKN A+G  + K  KRF+NDT+R++FH+KF+ KY+K
Sbjct: 181 PSQPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK 231

[Close]

BLAST of Cp4.1LG08g08390 vs. NCBI nr
Match: KAG7028289.1 (Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 444 bits (1142), Expect = 3.91e-153
Identity = 237/273 (86.81%), Postives = 239/273 (87.55%), Query Frame = 0


Query: 1   FIELGFSLVCVTAFSFLFYESKEPFSIFFAFEGPRRRGKSLEMTTAARPTWAPAKGGNEQ 60
           FIELGFSL+CVTAFSFLFYESKEPF IFF FEGPRRRGK+LEMTTAARPTWAPAKGGNEQ
Sbjct: 195 FIELGFSLICVTAFSFLFYESKEPFFIFFGFEGPRRRGKNLEMTTAARPTWAPAKGGNEQ 254

Query: 61  GGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSY 120
           GGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSY
Sbjct: 255 GGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSY 314

Query: 121 DDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDNER---------------- 180
           DDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDNE                 
Sbjct: 315 DDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDNESSDDDEDDDDEDDTEAL 374

Query: 181 LAGL-------------LERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVF 240
           LA L              ERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVF
Sbjct: 375 LAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVF 434

Query: 241 KNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 244
           KNQARGETKTPKRFINDTIRNDFHRKFLHKYMK
Sbjct: 435 KNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 467

[Close]

BLAST of Cp4.1LG08g08390 vs. NCBI nr
Match: XP_022950134.1 (protein CWC15 homolog isoform X2 [Cucurbita moschata] >XP_023005526.1 protein CWC15 homolog isoform X2 [Cucurbita maxima] >XP_023540513.1 protein CWC15 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369 bits (948), Expect = 3.43e-127
Identity = 199/230 (86.52%), Postives = 199/230 (86.52%), Query Frame = 0


Query: 43  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 102
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 103 DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 162
           DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120

Query: 163 ER---------------LAGL-------------LERQEREEELKVKEAELLRGNPLLNE 222
           E                LA L              ERQEREEELKVKEAELLRGNPLLNE
Sbjct: 121 ESDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNE 180

Query: 223 QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 244
           QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK
Sbjct: 181 QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 230

[Close]

BLAST of Cp4.1LG08g08390 vs. NCBI nr
Match: XP_022950127.1 (protein CWC15 homolog isoform X1 [Cucurbita moschata] >XP_023005525.1 protein CWC15 homolog isoform X1 [Cucurbita maxima] >XP_023540512.1 protein CWC15 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369 bits (947), Expect = 5.04e-127
Identity = 199/231 (86.15%), Postives = 199/231 (86.15%), Query Frame = 0


Query: 43  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 102
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 103 DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 162
           DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120

Query: 163 ER----------------LAGL-------------LERQEREEELKVKEAELLRGNPLLN 222
           E                 LA L              ERQEREEELKVKEAELLRGNPLLN
Sbjct: 121 ESSDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN 180

Query: 223 EQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 244
           EQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK
Sbjct: 181 EQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 231

[Close]

BLAST of Cp4.1LG08g08390 vs. NCBI nr
Match: XP_023553384.1 (protein CWC15 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 366 bits (939), Expect = 8.04e-126
Identity = 197/230 (85.65%), Postives = 199/230 (86.52%), Query Frame = 0


Query: 43  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 102
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 103 DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 162
           DELEDRERRHFSSKNKSYDDR+HRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSD+
Sbjct: 61  DELEDRERRHFSSKNKSYDDREHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDS 120

Query: 163 ER---------------LAGL-------------LERQEREEELKVKEAELLRGNPLLNE 222
           E                LA L              ERQEREEELKVKEAELLRGNPLLNE
Sbjct: 121 ESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNE 180

Query: 223 QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 244
           QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK
Sbjct: 181 QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 230

[Close]

BLAST of Cp4.1LG08g08390 vs. NCBI nr
Match: KAA0065755.1 (protein CWC15-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 363 bits (931), Expect = 7.03e-125
Identity = 192/212 (90.57%), Postives = 195/212 (91.98%), Query Frame = 0


Query: 43  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 102
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 103 DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKS-- 162
           DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVK+  
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKTLL 120

Query: 163 ------DNERLAGLL--ERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFK 222
                   ER    L  ERQEREEELKVKEAELLRGNPLLNEQP+SFSVKRRWDDDVVFK
Sbjct: 121 AELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFK 180

Query: 223 NQARGETKTPKRFINDTIRNDFHRKFLHKYMK 244
           NQARGE+KTPKRFINDTIRNDFHRKFL KYMK
Sbjct: 181 NQARGESKTPKRFINDTIRNDFHRKFLQKYMK 212

[Close]

BLAST of Cp4.1LG08g08390 vs. ExPASy TrEMBL
Match: A0A6J1KV80 (protein CWC15 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498489 PE=3 SV=1)

HSP 1 Score: 369 bits (948), Expect = 1.66e-127
Identity = 199/230 (86.52%), Postives = 199/230 (86.52%), Query Frame = 0


Query: 43  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 102
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 103 DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 162
           DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120

Query: 163 ER---------------LAGL-------------LERQEREEELKVKEAELLRGNPLLNE 222
           E                LA L              ERQEREEELKVKEAELLRGNPLLNE
Sbjct: 121 ESDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNE 180

Query: 223 QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 244
           QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK
Sbjct: 181 QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 230

[Close]

BLAST of Cp4.1LG08g08390 vs. ExPASy TrEMBL
Match: A0A6J1GEX7 (protein CWC15 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453305 PE=3 SV=1)

HSP 1 Score: 369 bits (948), Expect = 1.66e-127
Identity = 199/230 (86.52%), Postives = 199/230 (86.52%), Query Frame = 0


Query: 43  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 102
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 103 DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 162
           DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120

Query: 163 ER---------------LAGL-------------LERQEREEELKVKEAELLRGNPLLNE 222
           E                LA L              ERQEREEELKVKEAELLRGNPLLNE
Sbjct: 121 ESDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNE 180

Query: 223 QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 244
           QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK
Sbjct: 181 QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 230

[Close]

BLAST of Cp4.1LG08g08390 vs. ExPASy TrEMBL
Match: A0A6J1KXM9 (protein CWC15 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498489 PE=3 SV=1)

HSP 1 Score: 369 bits (947), Expect = 2.44e-127
Identity = 199/231 (86.15%), Postives = 199/231 (86.15%), Query Frame = 0


Query: 43  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 102
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 103 DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 162
           DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120

Query: 163 ER----------------LAGL-------------LERQEREEELKVKEAELLRGNPLLN 222
           E                 LA L              ERQEREEELKVKEAELLRGNPLLN
Sbjct: 121 ESSDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN 180

Query: 223 EQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 244
           EQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK
Sbjct: 181 EQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 231

[Close]

BLAST of Cp4.1LG08g08390 vs. ExPASy TrEMBL
Match: A0A6J1GDY2 (protein CWC15 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453305 PE=3 SV=1)

HSP 1 Score: 369 bits (947), Expect = 2.44e-127
Identity = 199/231 (86.15%), Postives = 199/231 (86.15%), Query Frame = 0


Query: 43  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 102
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 103 DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 162
           DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120

Query: 163 ER----------------LAGL-------------LERQEREEELKVKEAELLRGNPLLN 222
           E                 LA L              ERQEREEELKVKEAELLRGNPLLN
Sbjct: 121 ESSDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN 180

Query: 223 EQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 244
           EQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK
Sbjct: 181 EQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 231

[Close]

BLAST of Cp4.1LG08g08390 vs. ExPASy TrEMBL
Match: A0A5A7VJ59 (Protein CWC15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00460 PE=3 SV=1)

HSP 1 Score: 363 bits (931), Expect = 3.41e-125
Identity = 192/212 (90.57%), Postives = 195/212 (91.98%), Query Frame = 0


Query: 43  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 102
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 103 DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKS-- 162
           DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVK+  
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKTLL 120

Query: 163 ------DNERLAGLL--ERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFK 222
                   ER    L  ERQEREEELKVKEAELLRGNPLLNEQP+SFSVKRRWDDDVVFK
Sbjct: 121 AELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFK 180

Query: 223 NQARGETKTPKRFINDTIRNDFHRKFLHKYMK 244
           NQARGE+KTPKRFINDTIRNDFHRKFL KYMK
Sbjct: 181 NQARGESKTPKRFINDTIRNDFHRKFLQKYMK 212

[Close]

BLAST of Cp4.1LG08g08390 vs. TAIR 10
Match: AT3G13200.1 (Cwf15 / Cwc15 cell cycle control family protein )

HSP 1 Score: 295.8 bits (756), Expect = 3.1e-80
Identity = 163/231 (70.56%), Postives = 182/231 (78.79%), Query Frame = 0


Query: 43  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 102
           MTTAARPTWAPAKGGNEQGG RIFGPSQKYSSRD+A+HTTLKPR+EGQ T +ELQ+ NLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGARIFGPSQKYSSRDVAAHTTLKPRREGQHTQEELQKINLR 60

Query: 103 DELEDRERRHFSSKNKSY-DDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSD 162
           DELE+RERRHFSSK+KSY DDRD R+GSQLLLE  KRD E+RIIPRS+DADDSDVD+KSD
Sbjct: 61  DELEERERRHFSSKDKSYNDDRDRRRGSQLLLEDSKRDPEERIIPRSVDADDSDVDIKSD 120

Query: 163 N--------------------------ERLAGLL--ERQEREEELKVKEAELLRGNPLLN 222
           +                          ER+   L  E++++ EEL  KE ELL+GNPLLN
Sbjct: 121 DDSDDESDDDDEDDTEALMAELDQIKKERVEERLRKEKEQQMEELNAKEEELLKGNPLLN 180

Query: 223 EQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 245
             P SFSVKRRWDDDVVFKNQARGE K PKRFINDTIRNDFHRKFLH+YMK
Sbjct: 181 -TPTSFSVKRRWDDDVVFKNQARGEMKAPKRFINDTIRNDFHRKFLHRYMK 230

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g08390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9P013	3.3e-34	42.06	Spliceosome-associated protein CWC15 homolog OS=Homo sapiens OX=9606 GN=CWC15 PE...	[more]
Q9JHS9	3.3e-34	42.06	Spliceosome-associated protein CWC15 homolog OS=Mus musculus OX=10090 GN=Cwc15 P...	[more]
Q5RE65	3.3e-34	42.06	Spliceosome-associated protein CWC15 homolog OS=Pongo abelii OX=9601 GN=CWC15 PE...	[more]
Q5BJP2	3.3e-34	42.06	Spliceosome-associated protein CWC15 homolog OS=Rattus norvegicus OX=10116 GN=Cw...	[more]
Q2KJD3	5.7e-34	41.70	Spliceosome-associated protein CWC15 homolog OS=Bos taurus OX=9913 GN=CWC15 PE=2...	[more]

BLAST of Cp4.1LG08g08390 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028289.1	3.91e-153	86.81	Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyr...	[more]
XP_022950134.1	3.43e-127	86.52	protein CWC15 homolog isoform X2 [Cucurbita moschata] >XP_023005526.1 protein CW...	[more]
XP_022950127.1	5.04e-127	86.15	protein CWC15 homolog isoform X1 [Cucurbita moschata] >XP_023005525.1 protein CW...	[more]
XP_023553384.1	8.04e-126	85.65	protein CWC15 homolog [Cucurbita pepo subsp. pepo]	[more]
KAA0065755.1	7.03e-125	90.57	protein CWC15-like protein [Cucumis melo var. makuwa]	[more]

BLAST of Cp4.1LG08g08390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KV80	1.66e-127	86.52	protein CWC15 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498489 PE=...	[more]
A0A6J1GEX7	1.66e-127	86.52	protein CWC15 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453305 P...	[more]
A0A6J1KXM9	2.44e-127	86.15	protein CWC15 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498489 PE=...	[more]
A0A6J1GDY2	2.44e-127	86.15	protein CWC15 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453305 P...	[more]
A0A5A7VJ59	3.41e-125	90.57	Protein CWC15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]

BLAST of Cp4.1LG08g08390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13200.1	3.1e-80	70.56	Cwf15 / Cwc15 cell cycle control family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006973	Pre-mRNA-splicing factor Cwf15/Cwc15	PFAM	PF04889	Cwf_Cwc_15	coord: 43..163 e-value: 2.4E-26 score: 93.0 coord: 169..244 e-value: 8.0E-32 score: 110.9
IPR006973	Pre-mRNA-splicing factor Cwf15/Cwc15	PANTHER	PTHR12718	CELL CYCLE CONTROL PROTEIN CWF15	coord: 170..244 coord: 43..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..134
None	No IPR available	PANTHER	PTHR12718:SF6	SUBFAMILY NOT NAMED	coord: 170..244 coord: 43..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g08390.1	Cp4.1LG08g08390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045292	mRNA cis splicing, via spliceosome
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0003723	RNA binding