Cp4.1LG08g07740 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG08g07740
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionE3 ubiquitin-protein ligase MBR2-like
LocationCp4.1LG08: 6127099 .. 6127785 (-)
RNA-Seq ExpressionCp4.1LG08g07740
SyntenyCp4.1LG08g07740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTTAGCAGATTTGGCCACATTCCGCTGCAATCTCCACCGCTACGACGGTCCCGATCAGCTTCTCCAAATTCGAATAGGTCATTCAAGCCGTCTGCTCACCGGATCGCCGTTCTCCGGATATCCTTTCAATATCGTCCATGAAACTCTCCCTACTACAATGGCGGATGCTCAGTTCCCCCTTCCTTTGCGAGAGCTCGAAGATCCGTTATTCTGTCAAGCTTACATCAAGGAATTTCTGAGTTCTTACAACCTTGGTGCCACAATAAAAAACGCCATTGCTCGGAGGATTGCCTCGTTCGTCGTTCAAATGGCGTGCGGAAACTACGAGATGACATTCTACATCGTTGCTGAAATCGATTACATCCAGATGTTTTGGATGGACGACAGTGCGACTGCGGCGGAGGAGGAGGAGGATGAGGAGGAGGAGACGGAGATTTTTGACGACTTTTCGGGGAGGAGAGGGGCGCCGGAGACGGCGATAGAGAGGCTGAAGAAGGAGAAATTCGATGGATTTGGGGGAGAAGATTTGGGGAATTGTAGTGTGTGTTACGATGAGATGAAGGATGGCGGGGAAGAAGTGAGCAGAATCCCGTGCGGACATGTGTATCATAAATCTTGTGTTCTCACTTGGCTTCAAAGGAACAACTCATGTCCTCTGTGCAGAAACAAACTAGAAGCTTAA

mRNA sequence

ATGTCTTTAGCAGATTTGGCCACATTCCGCTGCAATCTCCACCGCTACGACGGTCCCGATCAGCTTCTCCAAATTCGAATAGGTCATTCAAGCCGTCTGCTCACCGGATCGCCGTTCTCCGGATATCCTTTCAATATCGTCCATGAAACTCTCCCTACTACAATGGCGGATGCTCAGTTCCCCCTTCCTTTGCGAGAGCTCGAAGATCCGTTATTCTGTCAAGCTTACATCAAGGAATTTCTGAGTTCTTACAACCTTGGTGCCACAATAAAAAACGCCATTGCTCGGAGGATTGCCTCGTTCGTCGTTCAAATGGCGTGCGGAAACTACGAGATGACATTCTACATCGTTGCTGAAATCGATTACATCCAGATGTTTTGGATGGACGACAGTGCGACTGCGGCGGAGGAGGAGGAGGATGAGGAGGAGGAGACGGAGATTTTTGACGACTTTTCGGGGAGGAGAGGGGCGCCGGAGACGGCGATAGAGAGGCTGAAGAAGGAGAAATTCGATGGATTTGGGGGAGAAGATTTGGGGAATTGTAGTGTGTGTTACGATGAGATGAAGGATGGCGGGGAAGAAGTGAGCAGAATCCCGTGCGGACATGTGTATCATAAATCTTGTGTTCTCACTTGGCTTCAAAGGAACAACTCATGTCCTCTGTGCAGAAACAAACTAGAAGCTTAA

Coding sequence (CDS)

ATGTCTTTAGCAGATTTGGCCACATTCCGCTGCAATCTCCACCGCTACGACGGTCCCGATCAGCTTCTCCAAATTCGAATAGGTCATTCAAGCCGTCTGCTCACCGGATCGCCGTTCTCCGGATATCCTTTCAATATCGTCCATGAAACTCTCCCTACTACAATGGCGGATGCTCAGTTCCCCCTTCCTTTGCGAGAGCTCGAAGATCCGTTATTCTGTCAAGCTTACATCAAGGAATTTCTGAGTTCTTACAACCTTGGTGCCACAATAAAAAACGCCATTGCTCGGAGGATTGCCTCGTTCGTCGTTCAAATGGCGTGCGGAAACTACGAGATGACATTCTACATCGTTGCTGAAATCGATTACATCCAGATGTTTTGGATGGACGACAGTGCGACTGCGGCGGAGGAGGAGGAGGATGAGGAGGAGGAGACGGAGATTTTTGACGACTTTTCGGGGAGGAGAGGGGCGCCGGAGACGGCGATAGAGAGGCTGAAGAAGGAGAAATTCGATGGATTTGGGGGAGAAGATTTGGGGAATTGTAGTGTGTGTTACGATGAGATGAAGGATGGCGGGGAAGAAGTGAGCAGAATCCCGTGCGGACATGTGTATCATAAATCTTGTGTTCTCACTTGGCTTCAAAGGAACAACTCATGTCCTCTGTGCAGAAACAAACTAGAAGCTTAA

Protein sequence

MSLADLATFRCNLHRYDGPDQLLQIRIGHSSRLLTGSPFSGYPFNIVHETLPTTMADAQFPLPLRELEDPLFCQAYIKEFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEIDYIQMFWMDDSATAAEEEEDEEEETEIFDDFSGRRGAPETAIERLKKEKFDGFGGEDLGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKLEA
Homology
BLAST of Cp4.1LG08g07740 vs. ExPASy Swiss-Prot
Match: Q9SPL2 (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana OX=3702 GN=CIP8 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 9.7e-12
Identity = 36/78 (46.15%), Postives = 48/78 (61.54%), Query Frame = 0

Query: 153 GRRGAP---ETAIERLKKEKFDGFGGEDLGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCV 212
           GRRGAP   ++AIE L+  +     GE +  C+VC D M   GE   ++PCGH YH  C+
Sbjct: 226 GRRGAPPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMV-MGETGKKLPCGHCYHGDCI 285

Query: 213 LTWLQRNNSCPLCRNKLE 228
           + WL   NSCP+CR +LE
Sbjct: 286 VPWLGTRNSCPVCRFQLE 302

BLAST of Cp4.1LG08g07740 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.1e-10
Identity = 24/50 (48.00%), Postives = 38/50 (76.00%), Query Frame = 0

Query: 177 DLGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKL 227
           ++  C+VC DE +D G +V ++PC HV+H+ C+L WL+ +NSCP+CR +L
Sbjct: 212 EMNQCAVCMDEFED-GSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

BLAST of Cp4.1LG08g07740 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.0e-10
Identity = 23/50 (46.00%), Postives = 37/50 (74.00%), Query Frame = 0

Query: 177 DLGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKL 227
           +   C+VC D+ ++ G E  ++PC H+YHK C+L WL+ +NSCP+CR++L
Sbjct: 220 EFNQCAVCMDDFEE-GTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHEL 268

BLAST of Cp4.1LG08g07740 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.1e-10
Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 0

Query: 146 EIFDDFSG---RRG---APETAIERLKKEKF-DGFGGEDLGNCSVCYDEMKDGGEEVSRI 205
           E+F+  S    RRG   AP +AI+ L   K           NC VC DE  + G E  ++
Sbjct: 148 ELFEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEF-ELGSEAKQM 207

Query: 206 PCGHVYHKSCVLTWLQRNNSCPLCRNKL 227
           PC H+YH  C++ WL ++NSCP+CR +L
Sbjct: 208 PCNHIYHSDCIVPWLVQHNSCPVCRQEL 234

BLAST of Cp4.1LG08g07740 vs. ExPASy Swiss-Prot
Match: Q6ZSG1 (E3 ubiquitin-protein ligase RNF165 OS=Homo sapiens OX=9606 GN=RNF165 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08
Identity = 39/133 (29.32%), Postives = 66/133 (49.62%), Query Frame = 0

Query: 110 YEMTFYIVAEIDYIQMFWMDDSATAAEEEEDEEEETEIFDDFSG-RRGAPETAIERL--- 169
           +E+  Y   ++ ++ +  ++ S   +   E  EE  ++ D      RGA +  IER    
Sbjct: 208 HEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFP 267

Query: 170 ----KKEKFDGFGGEDLG-------NCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQ 228
               K+   DG G +D G        C++C   ++D GE+V R+PC H++H+ CV  WL 
Sbjct: 268 HKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLED-GEDVRRLPCMHLFHQLCVDQWLA 327

BLAST of Cp4.1LG08g07740 vs. NCBI nr
Match: XP_023539480.1 (E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471 bits (1211), Expect = 1.38e-167
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0

Query: 1   MSLADLATFRCNLHRYDGPDQLLQIRIGHSSRLLTGSPFSGYPFNIVHETLPTTMADAQF 60
           MSLADLATFRCNLHRYDGPDQLLQIRIGHSSRLLTGSPFSGYPFNIVHETLPTTMADAQF
Sbjct: 1   MSLADLATFRCNLHRYDGPDQLLQIRIGHSSRLLTGSPFSGYPFNIVHETLPTTMADAQF 60

Query: 61  PLPLRELEDPLFCQAYIKEFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEI 120
           PLPLRELEDPLFCQAYIKEFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEI
Sbjct: 61  PLPLRELEDPLFCQAYIKEFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEI 120

Query: 121 DYIQMFWMDDSATAAEEEEDEEEETEIFDDFSGRRGAPETAIERLKKEKFDGFGGEDLGN 180
           DYIQMFWMDDSATAAEEEEDEEEETEIFDDFSGRRGAPETAIERLKKEKFDGFGGEDLGN
Sbjct: 121 DYIQMFWMDDSATAAEEEEDEEEETEIFDDFSGRRGAPETAIERLKKEKFDGFGGEDLGN 180

Query: 181 CSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKLEA 228
           CSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKLEA
Sbjct: 181 CSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKLEA 228

BLAST of Cp4.1LG08g07740 vs. NCBI nr
Match: XP_023539471.1 (uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 436 bits (1121), Expect = 1.13e-153
Identity = 215/240 (89.58%), Postives = 221/240 (92.08%), Query Frame = 0

Query: 1   MSLADLATFRCNLHRYDGPDQLLQIRIGHSSRLLTGSPFSGYPFNIVHETLPTTMADAQF 60
           MSLAD ATFRCNLHRYD PDQLLQIRI HS+RLLTGSPFSGYPFNIVHETLPTTMADAQF
Sbjct: 1   MSLADSATFRCNLHRYDDPDQLLQIRIRHSTRLLTGSPFSGYPFNIVHETLPTTMADAQF 60

Query: 61  PLPLRELEDPLFCQAYIKEFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEI 120
           PLPLRELEDPLFCQAYI+EFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEI
Sbjct: 61  PLPLRELEDPLFCQAYIEEFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEI 120

Query: 121 DYIQMFWMDDSATAAEEEEDEEEETE------------IFDDFSGRRGAPETAIERLKKE 180
           DYIQMFW+D SA AAEEEE+EEE+ E            IFD+FSGRRGAPETAIERLKKE
Sbjct: 121 DYIQMFWLDQSAIAAEEEEEEEEDEEEEEDEEEEEEEVIFDNFSGRRGAPETAIERLKKE 180

Query: 181 KFDGFGGEDLGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKLEA 228
           KFDGFGGEDLGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCR KLEA
Sbjct: 181 KFDGFGGEDLGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRKKLEA 240

BLAST of Cp4.1LG08g07740 vs. NCBI nr
Match: XP_023539483.1 (E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 415 bits (1066), Expect = 1.97e-145
Identity = 209/231 (90.48%), Postives = 212/231 (91.77%), Query Frame = 0

Query: 1   MSLADLATFRCNLHRYDGPDQLLQIRIGHSSRLLTGSPFSGYPFNIVHETLPTTMADAQF 60
           MSLAD  TFRCNLHRYDG DQLLQIRIGHSSRLLT SPFSGY FNIVH TLPTTMADAQF
Sbjct: 1   MSLADSGTFRCNLHRYDGLDQLLQIRIGHSSRLLTESPFSGYAFNIVHGTLPTTMADAQF 60

Query: 61  PLPLRELEDPLFCQAYIKEFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEI 120
           PLPLRELEDPLFC+AYI+EFLSSYNLGATIKNAIAR IASFVVQMAC NYEM FYIVAEI
Sbjct: 61  PLPLRELEDPLFCRAYIEEFLSSYNLGATIKNAIARSIASFVVQMACENYEMKFYIVAEI 120

Query: 121 DYIQMFWMDDSATAAEEE----EDEEEETEIFDDFSGRRGAPETAIERLKKEKFDGFGGE 180
           DYIQMFWMDDSATAAEEE    E+EEEETEIFDDFSGRRGAPETAIERLK EKFD FGGE
Sbjct: 121 DYIQMFWMDDSATAAEEEDEDEEEEEEETEIFDDFSGRRGAPETAIERLK-EKFDEFGGE 180

Query: 181 DLGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKLE 227
           DL NCSVCYDEMKDGGEEVSRIPCGHVYHK CVLTWLQRNNSCPLC  KLE
Sbjct: 181 DLRNCSVCYDEMKDGGEEVSRIPCGHVYHKYCVLTWLQRNNSCPLCTKKLE 230

BLAST of Cp4.1LG08g07740 vs. NCBI nr
Match: XP_023539485.1 (RING-H2 finger protein ATL80-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 397 bits (1020), Expect = 2.09e-138
Identity = 198/232 (85.34%), Postives = 207/232 (89.22%), Query Frame = 0

Query: 1   MSLADLATFRCNLHRYDGPDQLLQIRIGHSSRLLTGSPFSGYPFNIVHETLPTTMADAQF 60
           MS AD  TFRCNLHRYDG  QLLQIRIGHS+RLL GS F GYPFNIV+ETL T MADAQF
Sbjct: 1   MSFADSITFRCNLHRYDGLYQLLQIRIGHSTRLLIGSSFPGYPFNIVYETLTTRMADAQF 60

Query: 61  PLPLRELEDPLFCQAYIKEFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEI 120
           PLPLRELEDPLFC+AYI+EFLSSYNL ATI NAIA+RI SFVVQMACGNYEMTFYIVAEI
Sbjct: 61  PLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRITSFVVQMACGNYEMTFYIVAEI 120

Query: 121 DYIQMFWMDDSATAAEEEEDEEEETE----IFDDFSGRRGAPETAIERLKKEKFDGFGGE 180
           DYIQMFW+D SA A EEEE+EE+E E    IFD+FS RRGAPETAIERLKKEKFDGFGGE
Sbjct: 121 DYIQMFWLDQSAIATEEEEEEEDEEEEVEVIFDNFSERRGAPETAIERLKKEKFDGFGGE 180

Query: 181 DLGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKLEA 228
           DLGNCSVCYDEMKDGGEEVSRI CGHVYHKSCVLTWLQRNNSCPL R KLEA
Sbjct: 181 DLGNCSVCYDEMKDGGEEVSRILCGHVYHKSCVLTWLQRNNSCPLWRKKLEA 232

BLAST of Cp4.1LG08g07740 vs. NCBI nr
Match: KAG6596836.1 (hypothetical protein SDJN03_10016, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 397 bits (1019), Expect = 3.82e-138
Identity = 195/239 (81.59%), Postives = 206/239 (86.19%), Query Frame = 0

Query: 1   MSLADLATFRCNLHRYDGPDQLLQIRIGHSSRLLTGSPFSGYPFNIVHETLPTTMADAQF 60
           MS AD  TF CNLHRYDGPDQLLQIRIGHS RL  GSP  GYPFNIV+ETL T   DAQF
Sbjct: 1   MSFADSVTFTCNLHRYDGPDQLLQIRIGHSRRLFIGSPLPGYPFNIVYETLTTITVDAQF 60

Query: 61  PLPLRELEDPLFCQAYIKEFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEI 120
            LPLRELEDPLFC+AYI+EFLSSYNL ATI NAIA+RIASFVVQMACGNYEMTFYIVAEI
Sbjct: 61  SLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIASFVVQMACGNYEMTFYIVAEI 120

Query: 121 DYIQMFWMDDSATAAEEEEDEEEETE-----------IFDDFSGRRGAPETAIERLKKEK 180
           DYIQMFW+D SA AAEEEE+EEEE +           IFD+FS RRGAPETAIERLKKEK
Sbjct: 121 DYIQMFWLDQSAIAAEEEEEEEEEEDEEEEEEEEEEVIFDNFSERRGAPETAIERLKKEK 180

Query: 181 FDGFGGEDLGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKLEA 228
           FDGFGGEDLGNCSVCYDEMK+GGEE+ RIPCGHVYHKSCVLTWLQRNNSCPLCR K+EA
Sbjct: 181 FDGFGGEDLGNCSVCYDEMKEGGEELIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKIEA 239

BLAST of Cp4.1LG08g07740 vs. ExPASy TrEMBL
Match: A0A6J1G7L1 (NEP1-interacting protein-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111451601 PE=4 SV=1)

HSP 1 Score: 215 bits (548), Expect = 3.25e-67
Identity = 116/229 (50.66%), Postives = 152/229 (66.38%), Query Frame = 0

Query: 1   MSLADLATFRCNLHRYDGPDQLLQIRIGHSSRLLTGSPFSGYPFNIVHETLPTTMADAQF 60
           M  A+ +T R +L R  G DQLLQ+R+G+SSRL++ SP +G P++I+ ET  T MADA F
Sbjct: 1   MPFANASTLRYSLRRNHGADQLLQLRLGYSSRLISRSPSAGLPYDILEETPSTPMADALF 60

Query: 61  PLPLRELEDPLFCQAYIKEFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEI 120
           PLPLRELEDPLFC AY+ E +SS+NLG+   N I ++I SFV Q A  +Y+  F +VA+I
Sbjct: 61  PLPLRELEDPLFCHAYLVELVSSFNLGSVTWNPIVQKITSFVTQWAAVDYDAKFQLVADI 120

Query: 121 DYIQMFWMDDSATAAEEEEDEEEETEIFDDFSGRRGAPETAIERLKKEKFDGFGGEDLGN 180
           DYIQMFWM+    +       EE   +           ET +   +K+   G GGE+   
Sbjct: 121 DYIQMFWMEKHRGSVGRGVMVEERVVL----------EETGVAAAEKQ---GIGGEE--- 180

Query: 181 CSVCYD--EMKDGGE-EVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKL 226
           CSVCY+  E + GGE EV++IPCGH +HKSC+LTW QR+NSCPLCR KL
Sbjct: 181 CSVCYESYEAEKGGEKEVAKIPCGHAFHKSCILTWFQRSNSCPLCRAKL 213

BLAST of Cp4.1LG08g07740 vs. ExPASy TrEMBL
Match: A0A6J1G7R8 (E3 ubiquitin-protein ligase MBR2-like OS=Cucurbita moschata OX=3662 GN=LOC111451612 PE=4 SV=1)

HSP 1 Score: 214 bits (545), Expect = 1.02e-66
Identity = 109/226 (48.23%), Postives = 145/226 (64.16%), Query Frame = 0

Query: 1   MSLADLATFRCNLHRYDGPDQLLQIRIGHSSRLLTGSPFSGYPFNIVHETLPTTMADAQF 60
           M  A+ +T R +L R DG DQLLQ+R+G+SSRL++ SP+SG P++I+ ET  T +AD  F
Sbjct: 1   MLFANSSTLRYSLRRKDGTDQLLQVRLGYSSRLISRSPYSGLPYDILEETPSTLIADTLF 60

Query: 61  PLPLRELEDPLFCQAYIKEFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEI 120
           PLPLRELEDPLFC AY+ E +SS NL +   N IA++I S V Q A  +Y++ F +VA+I
Sbjct: 61  PLPLRELEDPLFCHAYLVELVSSLNLDSISCNPIAQKITSLVTQWAAVDYDLKFQLVADI 120

Query: 121 DYIQMFWMDDSATAAEEEEDEEEETEIFDDFSGRRGAPETAIERLKKEKFDGFGGEDLGN 180
           DYIQMFW ++S          EE+  +           E  +         G GGE+   
Sbjct: 121 DYIQMFWREESRGPVRRGVMVEEKVVL----------EEAGVAATSAAGKQGMGGEECSV 180

Query: 181 CSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKL 226
           C  CYDE K G +EV++IPCGH++HKSC+LTW   +NSCPLCR KL
Sbjct: 181 CYECYDEEKGGDKEVAKIPCGHMFHKSCILTWFLCSNSCPLCRAKL 216

BLAST of Cp4.1LG08g07740 vs. ExPASy TrEMBL
Match: A0A6J1L191 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111499501 PE=4 SV=1)

HSP 1 Score: 207 bits (528), Expect = 4.23e-64
Identity = 109/226 (48.23%), Postives = 146/226 (64.60%), Query Frame = 0

Query: 1   MSLADLATFRCNLHRYDGPDQLLQIRIGHSSRLLTGSPFSGYPFNIVHETLPTTMADAQF 60
           M  A+ +T R +L R+ G DQLLQ+R+G+SSRL++ SP +G P++I+ ET  T +ADA F
Sbjct: 1   MLFANSSTLRYSLRRHHGTDQLLQVRLGYSSRLISQSPSAGLPYDILEETPLTPIADALF 60

Query: 61  PLPLRELEDPLFCQAYIKEFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEI 120
           PLPLRELEDPLFC AY+ E +SS NL +   N I ++I S V Q A  +Y+  F +V +I
Sbjct: 61  PLPLRELEDPLFCHAYLVELVSSLNLDSMSCNPIIQKITSLVTQWAAVDYDAKFQLVVDI 120

Query: 121 DYIQMFWMDDSATAAEEEEDEEEETEIFDDFSGRRGAPETAIERLKKEKFDGFGGEDLGN 180
           DYIQMFW ++S          EE   + D    + G   T       ++  G GGE+   
Sbjct: 121 DYIQMFWREESRGPVRRGVMVEERI-VLD----KAGVAATVAAAAAGKQ--GMGGEECSV 180

Query: 181 CSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKL 226
           C  CYDE K G +EV++IPCGH++HKSC+LTW Q +NSCPLCR KL
Sbjct: 181 CYECYDEEKGGDKEVAKIPCGHMFHKSCILTWFQCSNSCPLCRAKL 219

BLAST of Cp4.1LG08g07740 vs. ExPASy TrEMBL
Match: A0A6J1L186 (NEP1-interacting protein-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111499495 PE=4 SV=1)

HSP 1 Score: 201 bits (512), Expect = 9.24e-62
Identity = 112/229 (48.91%), Postives = 148/229 (64.63%), Query Frame = 0

Query: 1   MSLADLATFRCNLHRYDGPDQLLQIRIGHSSRLLTGSPFSGYPFNIVHETLPTTMADAQF 60
           M LA+ +T R +L R  G DQ L+ R+ +SSRL++ SP +G P++I+ ET  T MADA F
Sbjct: 1   MPLANASTLRYSLRRNHGADQFLRFRLCYSSRLISRSPSAGLPYDILEETPSTPMADALF 60

Query: 61  PLPLRELEDPLFCQAYIKEFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEI 120
           PLPLRELEDPLFC AY+ E +SS NL +   N I ++I S V Q A  +Y+  F +VA+I
Sbjct: 61  PLPLRELEDPLFCHAYLIELVSSLNLDSMSCNPIVQKITSLVTQWAAVDYDAKFQLVADI 120

Query: 121 DYIQMFWMDDSATAAEEEEDEEEETEIFDDFSGRRGAPETAIERLKKEKFDGFGGEDLGN 180
           DYIQMFWM+    +       EE+  +           E  +   +K+   G GGE+   
Sbjct: 121 DYIQMFWMEKRPGSVGRGVMVEEKVVL----------KEAEVAAAEKQ---GIGGEE--- 180

Query: 181 CSVCYD--EMKDGGE-EVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKL 226
           CSVCY+  E + GGE EV++IPCGHV+HKSC+LTW QR+NSCPLCR KL
Sbjct: 181 CSVCYESYEAEKGGEREVAKIPCGHVFHKSCILTWFQRSNSCPLCRAKL 213

BLAST of Cp4.1LG08g07740 vs. ExPASy TrEMBL
Match: A0A6J1G809 (probable E3 ubiquitin-protein ligase RHA4A OS=Cucurbita moschata OX=3662 GN=LOC111451600 PE=4 SV=1)

HSP 1 Score: 173 bits (439), Expect = 1.31e-50
Identity = 99/233 (42.49%), Postives = 141/233 (60.52%), Query Frame = 0

Query: 2   SLADLATFRCN----LHRYDGPDQLLQIRIGHSSRLLTGSPFSGYPFNIVHETLPTTMAD 61
           SL+   +FR N    L  ++ P Q +++R+GHSS L++ S        I+ +T  T M D
Sbjct: 8   SLSFQCSFRTNSTGTLASHEQPMQFVELRLGHSSHLISRSSRQ-----ILQQTPSTPMGD 67

Query: 62  AQFPLPLRELEDPLFC-QAYIKEFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYI 121
           A FP  LR+L  P F  ++++  FLSS+++   + N I   I+SF + +A GN ++ F+I
Sbjct: 68  ALFPFILRDLLHPPFLSKSHVLRFLSSFSIPIAVCNIIFVEISSFALHLAAGNVDLNFHI 127

Query: 122 VAEIDYIQMFWMDDSATAAEEEEDEEEETEIFDDFS--GRRGAPETAIERLKKEKFDGFG 181
           V ++D I+M W+D      EE             +S     GAP +AIERL++++FDG  
Sbjct: 128 VVDVDAIEMIWVDLDPFLIEE-------------YSPPAMNGAPASAIERLQRQEFDGLR 187

Query: 182 GEDLGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKLE 227
            E+ G CSVC + +K G EEVSRIPCGHVYHK C+L WLQ +NSCPLCR KLE
Sbjct: 188 EEEEGECSVCCEALK-GEEEVSRIPCGHVYHKCCILRWLQMSNSCPLCRTKLE 221

BLAST of Cp4.1LG08g07740 vs. TAIR 10
Match: AT5G64920.1 (COP1-interacting protein 8 )

HSP 1 Score: 72.0 bits (175), Expect = 6.9e-13
Identity = 36/78 (46.15%), Postives = 48/78 (61.54%), Query Frame = 0

Query: 153 GRRGAP---ETAIERLKKEKFDGFGGEDLGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCV 212
           GRRGAP   ++AIE L+  +     GE +  C+VC D M   GE   ++PCGH YH  C+
Sbjct: 226 GRRGAPPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMV-MGETGKKLPCGHCYHGDCI 285

Query: 213 LTWLQRNNSCPLCRNKLE 228
           + WL   NSCP+CR +LE
Sbjct: 286 VPWLGTRNSCPVCRFQLE 302

BLAST of Cp4.1LG08g07740 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.9e-11
Identity = 32/79 (40.51%), Postives = 43/79 (54.43%), Query Frame = 0

Query: 149 DDFSGRRGAPETAIERLKKEKF-DGFGGEDLGNCSVCYDEMKDGGEEVSRIPCGHVYHKS 208
           DD  G   A E  I  L   K        D+  C+VC +E   GG + + +PC H+YHK 
Sbjct: 191 DDRPGPPPASEPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGG-DATELPCKHIYHKD 250

Query: 209 CVLTWLQRNNSCPLCRNKL 227
           C++ WL+ NNSCP+CR  L
Sbjct: 251 CIVPWLRLNNSCPICRRDL 268

BLAST of Cp4.1LG08g07740 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.9e-11
Identity = 24/50 (48.00%), Postives = 38/50 (76.00%), Query Frame = 0

Query: 177 DLGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKL 227
           ++  C+VC DE +D G +V ++PC HV+H+ C+L WL+ +NSCP+CR +L
Sbjct: 212 EMNQCAVCMDEFED-GSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

BLAST of Cp4.1LG08g07740 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 65.5 bits (158), Expect = 6.5e-11
Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 0

Query: 146 EIFDDFSG---RRG---APETAIERLKKEKF-DGFGGEDLGNCSVCYDEMKDGGEEVSRI 205
           E+F+  S    RRG   AP +AI+ L   K           NC VC DE  + G E  ++
Sbjct: 148 ELFEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEF-ELGSEAKQM 207

Query: 206 PCGHVYHKSCVLTWLQRNNSCPLCRNKL 227
           PC H+YH  C++ WL ++NSCP+CR +L
Sbjct: 208 PCNHIYHSDCIVPWLVQHNSCPVCRQEL 234

BLAST of Cp4.1LG08g07740 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 65.5 bits (158), Expect = 6.5e-11
Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 0

Query: 146 EIFDDFSG---RRG---APETAIERLKKEKF-DGFGGEDLGNCSVCYDEMKDGGEEVSRI 205
           E+F+  S    RRG   AP +AI+ L   K           NC VC DE  + G E  ++
Sbjct: 148 ELFEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEF-ELGSEAKQM 207

Query: 206 PCGHVYHKSCVLTWLQRNNSCPLCRNKL 227
           PC H+YH  C++ WL ++NSCP+CR +L
Sbjct: 208 PCNHIYHSDCIVPWLVQHNSCPVCRQEL 234

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SPL29.7e-1246.15E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana OX=3702 GN=CIP8 PE=1 SV... [more]
Q8LPN74.1e-1048.00E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19... [more]
P0CH307.0e-1046.00E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV... [more]
O221979.1e-1039.77Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH... [more]
Q6ZSG11.3e-0829.32E3 ubiquitin-protein ligase RNF165 OS=Homo sapiens OX=9606 GN=RNF165 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
XP_023539480.11.38e-167100.00E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo][more]
XP_023539471.11.13e-15389.58uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo][more]
XP_023539483.11.97e-14590.48E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo][more]
XP_023539485.12.09e-13885.34RING-H2 finger protein ATL80-like [Cucurbita pepo subsp. pepo][more]
KAG6596836.13.82e-13881.59hypothetical protein SDJN03_10016, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1G7L13.25e-6750.66NEP1-interacting protein-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111451601 PE... [more]
A0A6J1G7R81.02e-6648.23E3 ubiquitin-protein ligase MBR2-like OS=Cucurbita moschata OX=3662 GN=LOC111451... [more]
A0A6J1L1914.23e-6448.23E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1L1869.24e-6248.91NEP1-interacting protein-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111499495 PE=4... [more]
A0A6J1G8091.31e-5042.49probable E3 ubiquitin-protein ligase RHA4A OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
Match NameE-valueIdentityDescription
AT5G64920.16.9e-1346.15COP1-interacting protein 8 [more]
AT1G60360.12.9e-1140.51RING/U-box superfamily protein [more]
AT3G19950.12.9e-1148.00RING/U-box superfamily protein [more]
AT2G40830.26.5e-1139.77RING-H2 finger C1A [more]
AT2G40830.16.5e-1139.77RING-H2 finger C1A [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 181..222
e-value: 4.6E-8
score: 42.8
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 180..223
e-value: 7.2E-14
score: 51.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 181..223
score: 13.581
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 144..228
e-value: 1.6E-19
score: 71.3
NoneNo IPR availablePANTHERPTHR45931:SF9E3 UBIQUITIN-PROTEIN LIGASE RNF12-B-LIKEcoord: 73..227
NoneNo IPR availablePANTHERPTHR45931SI:CH211-59O9.10coord: 73..227
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 140..226

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g07740.1Cp4.1LG08g07740.1mRNA