Cp4.1LG08g07630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g07630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein cornichon homolog 4-like
Location	Cp4.1LG08: 6160325 .. 6162454 (+)
RNA-Seq Expression	Cp4.1LG08g07630
Synteny	Cp4.1LG08g07630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCATCTTGCTTGGAAATGGTGTTGCTTCAATCACTCTGTTCGCCTTTAACCAAAAATCACTGGTAATATAGCCTGAGACAGCGGAAGAGGAGAGGAGTAGCATGGGGGATCTATATGTGTGGCTCGTTTCATTCTTCTTTCTCATAGCTCTTCTGATTGTCCTTATATATCAGGTAAATTTGAAACCCTATCTCGTTTGTTTTTCTCGAATTATCTTCAGTTCAAGTTGGTAAAGTAGAATCTGTTTGAATCAAAGACGGTTTATGTCAAAATTTCGTAGGCGGATACATTGCTTACCATTTCTTATCGTTAATTTGAAGTAAATGAGTATTTCGATTCACGTTTTGTTCAGCTCGGAGGGATTAGTGTTTTGCACAATTATGTTCACATATTCGTCTTCGCTTGTCAATTTGGAAGTACTTTTCTAGAAAGCGTAAATCTCGACTGCACCTTGGATTAGATTTGTACTGAGTGTTCAAGCAGCGGCTGGCGATCCTTGTTTTTTGTTTGTTTACTTGTTATTACTATTATTTTCTTTGGATTTCACGTCGAATTATTAATTTTTTGCCATGCTCTCTGGTGTTCTTGTTTTAGTAATTTGAACTTTTTATTGCTTTTCCCCAATTTCTTGAAGTTTTGATCTCATTTGTTATGAGAAGGACAATTAATGTTCAAATTTATGAACATATGGTCAGCTCCCCTCTGGCTTAAGGATGTGATAGATATGGATACCGTGGGTCAATACAGCATGTTGGCTGATTCTTAGTTTGAGTGTTCTAATATTGATCGTTAGAATATCTATTGGTAGAAACTCAATTTGAAAGAAGCTGGTAGTGAGTATGAGCTCGTATTGAAACATATTCGAGGGTTTTAAATTTATATTTAGAAGTTATTCGAATCGAGTTTTCCTTTTGTAACTAAACGTATCAATTGCCTCTTTTTGAACATTTGAAGTATGAAAGATCAAAATCAACTTCTTGTTTAGTAATTTATTATCATTATCTTTTGTGTAGCTCATGTGCTTGGCGGATCTCGAGTTCGATTATATCAACCCTTATGACTCTGCTTCTCGAATTAATAAAGTGATTTTTCCGGAGTTCATATCTATGGGAGTATTGTGCCTCTTCTATCTTTTAACGGGGCATTGGGGTATGTCAATACTTTGTGGACCCTACATATATTACAATGTGAGAATGTAAGTGTTCTCATCCCTCACCTTTAATTGAACTTATTATCTAAATCAAGTAATATCTGTTACAATTTTTATGCACTTACAAAGATTCCTAGAGATAAGCGTGTATGCATGATTTGTAATGTCCTATACTGTTTAACCAAAGAAACACATGATTATGAAAGTATAGGCTATTTGCTTCTGATTTTGAGCATTCAGAAAAACCATAGCCTCCCATTGATTTGACAGATGTTAAATTTGATGATTGTCCTCAAAGCTAGATCTACCTTGTAGGATTGGGCTTACTGTCAGGGCATAGCTTAGATCTAAGAAGCACAAATACGGCCATGCAACACAGATACAAGACAACATGAACATGGCAATACGTTGATTTCCAAAAAAAGTAGGACATAACTCGTTGGTAACATGTTAATGTTATTTTTAATTTTTAAAAAATACATTTGTGTATATTTGGACATATTATGAATATCTAATACTTTTAATGTAAATTTCTATCTTTAAACATCAAAAGAACATTTATAGATAACGATAAGATAACAATTGACAAACAATGTCAACAATATCCAGTATATGCAATATCCAATAAGTCTTATAAAAAAAACTACAAGGTAGAATCAAACAAAACAATCCTTCTACAGATTACATATTTTCCCCATGTTTGTCCTCTTTACTGGTGGTTGACAACGACTGACAATGGTTGTTGGTTGTTGTCATTGATGAGCAGCTGTGAGTTTTTTTCCCCCTTCATGGATGCAATCGTGAATTGAAGGTTTGAAGATATTGAAAAGAAACCCTAGTATTTTGAGGTTTATATGTGTGGCTTCAATTGTTGGGTATTTTGCTTTCTTTTAAATGAGCTTAAAAGACTTAAAACTTGAAAATTTGTAACATTACGTGTCTCAGTCATGTCTTTGTGTGTCCCCAGCTGTGTCCAAGT

mRNA sequence

GCCATCTTGCTTGGAAATGGTGTTGCTTCAATCACTCTGTTCGCCTTTAACCAAAAATCACTGCTCATGTGCTTGGCGGATCTCGAGTTCGATTATATCAACCCTTATGACTCTGCTTCTCGAATTAATAAAGTGATTTTTCCGGAGTTCATATCTATGGGAGTATTGTGCCTCTTCTATCTTTTAACGGGGCATTGGGGTATGTCAATACTTTGTGGACCCTACATATATTACAATGTGAGAATGTAAGTGTTCTCATCCCTCACCTTTAATTGAACTTATTATCTAAATCAAGTAATATCTGTTACAATTTTTATGCACTTACAAAGATTCCTAGAGATAAGCGTGTATGCATGATTTGTAATGTCCTATACTGTTTAACCAAAGAAACACATGATTATGAAAGTATAGGCTATTTGCTTCTGATTTTGAGCATTCAGAAAAACCATAGCCTCCCATTGATTTGACAGATGTTAAATTTGATGATTGTCCTCAAAGCTAGATCTACCTTGTAGGATTGGGCTTACTGTCAGGGCATAGCTTAGATCTAAGAAGCACAAATACGGCCATGCAACACAGATACAAGACAACATGAACATGGCAATACGTTGATTTCCAAAAAAAGTAGGACATAACTCGTTGGTAACATGTTAATGTTATTTTTAATTTTTAAAAAATACATTTGTGTATATTTGGACATATTATGAATATCTAATACTTTTAATGTAAATTTCTATCTTTAAACATCAAAAGAACATTTATAGATAACGATAAGATAACAATTGACAAACAATGTCAACAATATCCAGTATATGCAATATCCAATAAGTCTTATAAAAAAAACTACAAGGTAGAATCAAACAAAACAATCCTTCTACAGATTACATATTTTCCCCATGTTTGTCCTCTTTACTGGTGGTTGACAACGACTGACAATGGTTGTTGGTTGTTGTCATTGATGAGCAGCTGTGAGTTTTTTTCCCCCTTCATGGATGCAATCGTGAATTGAAGGTTTGAAGATATTGAAAAGAAACCCTAGTATTTTGAGGTTTATATGTGTGGCTTCAATTGTTGGGTATTTTGCTTTCTTTTAAATGAGCTTAAAAGACTTAAAACTTGAAAATTTGTAACATTACGTGTCTCAGTCATGTCTTTGTGTGTCCCCAGCTGTGTCCAAGT

Coding sequence (CDS)

GCCATCTTGCTTGGAAATGGTGTTGCTTCAATCACTCTGTTCGCCTTTAACCAAAAATCACTGCTCATGTGCTTGGCGGATCTCGAGTTCGATTATATCAACCCTTATGACTCTGCTTCTCGAATTAATAAAGTGATTTTTCCGGAGTTCATATCTATGGGAGTATTGTGCCTCTTCTATCTTTTAACGGGGCATTGGGGTATGTCAATACTTTGTGGACCCTACATATATTACAATGTGAGAATGTAA

Protein sequence

AILLGNGVASITLFAFNQKSLLMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVRM

Homology

[Close]

BLAST of Cp4.1LG08g07630 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 2.2e-22
Identity = 46/61 (75.41%), Postives = 53/61 (86.89%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          L+CLADLEFDYINPYDSASRIN V+ PEFI  GVLC+FYLLTGHW M++LC PY+YYN  
Sbjct: 17 LVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFH 76

Query: 82 M 83
          +
Sbjct: 77 L 77

[Close]

BLAST of Cp4.1LG08g07630 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.2e-22
Identity = 46/61 (75.41%), Postives = 53/61 (86.89%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          L+CLADLEFDYINPYDSASRIN V+ PEFI  GVLC+FYLLTGHW M++LC PY+YYN  
Sbjct: 25 LVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFH 84

Query: 82 M 83
          +
Sbjct: 85 L 85

[Close]

BLAST of Cp4.1LG08g07630 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.9e-19
Identity = 42/61 (68.85%), Postives = 50/61 (81.97%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          L+ LADLEFDYINPYDSASRIN V+ PE I  G LC+FYL+TGHW M++LC PY+YYN  
Sbjct: 25 LISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYNFH 84

Query: 82 M 83
          +
Sbjct: 85 L 85

[Close]

BLAST of Cp4.1LG08g07630 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 2.1e-17
Identity = 37/61 (60.66%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          L CLADLEFD INPYD +SRIN+++ PEF   G+LCL+Y+LTGHW M++L  P+++YN+R
Sbjct: 25 LTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYYILTGHWFMAVLSLPHLFYNIR 84

Query: 82 M 83
          +
Sbjct: 85 L 85

[Close]

BLAST of Cp4.1LG08g07630 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.6e-11
Identity = 27/61 (44.26%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          ++CL DLE DY+NP+++++RIN+++ PEFI  G LCL +LLT HW   ++  P   Y+  
Sbjct: 26 VICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYHAM 85

Query: 82 M 83
          +
Sbjct: 86 L 86

[Close]

BLAST of Cp4.1LG08g07630 vs. NCBI nr
Match: XP_023005595.1 (protein cornichon homolog 4-like [Cucurbita maxima] >KAG6596832.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 131 bits (329), Expect = 4.05e-37
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR
Sbjct: 25 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 84

[Close]

BLAST of Cp4.1LG08g07630 vs. NCBI nr
Match: XP_023539252.1 (protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131 bits (329), Expect = 4.05e-37
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR
Sbjct: 25 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 84

[Close]

BLAST of Cp4.1LG08g07630 vs. NCBI nr
Match: XP_022943501.1 (protein cornichon homolog 4-like [Cucurbita moschata])

HSP 1 Score: 129 bits (325), Expect = 1.64e-36
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          LMCLADLEFDYINPYDSAS+INKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR
Sbjct: 25 LMCLADLEFDYINPYDSASQINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 84

[Close]

BLAST of Cp4.1LG08g07630 vs. NCBI nr
Match: KAG7028361.1 (Protein cornichon-like 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 127 bits (318), Expect = 1.50e-35
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNV 80
          LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNV
Sbjct: 25 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNV 83

[Close]

BLAST of Cp4.1LG08g07630 vs. NCBI nr
Match: XP_008448916.1 (PREDICTED: protein cornichon homolog 4 isoform X1 [Cucumis melo] >XP_008448917.1 PREDICTED: protein cornichon homolog 4 isoform X1 [Cucumis melo])

HSP 1 Score: 125 bits (313), Expect = 1.10e-34
Identity = 56/61 (91.80%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          LMCLADLEFDYINPYDSASRINKVI PEF++MGVLCLFYLLTGHWGMS+LCGPYIYYNVR
Sbjct: 25 LMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLCLFYLLTGHWGMSMLCGPYIYYNVR 84

[Close]

BLAST of Cp4.1LG08g07630 vs. ExPASy TrEMBL
Match: A0A6J1KXU1 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111498534 PE=3 SV=1)

HSP 1 Score: 131 bits (329), Expect = 1.96e-37
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR
Sbjct: 25 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 84

[Close]

BLAST of Cp4.1LG08g07630 vs. ExPASy TrEMBL
Match: A0A6J1FRW5 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111448252 PE=3 SV=1)

HSP 1 Score: 129 bits (325), Expect = 7.95e-37
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          LMCLADLEFDYINPYDSAS+INKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR
Sbjct: 25 LMCLADLEFDYINPYDSASQINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 84

[Close]

BLAST of Cp4.1LG08g07630 vs. ExPASy TrEMBL
Match: A0A1S3BLR3 (protein cornichon homolog 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490940 PE=3 SV=1)

HSP 1 Score: 125 bits (313), Expect = 5.32e-35
Identity = 56/61 (91.80%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          LMCLADLEFDYINPYDSASRINKVI PEF++MGVLCLFYLLTGHWGMS+LCGPYIYYNVR
Sbjct: 25 LMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLCLFYLLTGHWGMSMLCGPYIYYNVR 84

[Close]

BLAST of Cp4.1LG08g07630 vs. ExPASy TrEMBL
Match: A0A5D3D7B8 (Protein cornichon-like protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001230 PE=3 SV=1)

HSP 1 Score: 124 bits (310), Expect = 7.24e-35
Identity = 55/60 (91.67%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 23 MCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVRM 82
          MCLADLEFDYINPYDSASRINKVI PEF++MGVLCLFYLLTGHWGMS+LCGPYIYYNVR+
Sbjct: 1  MCLADLEFDYINPYDSASRINKVIMPEFVAMGVLCLFYLLTGHWGMSMLCGPYIYYNVRL 60

[Close]

BLAST of Cp4.1LG08g07630 vs. ExPASy TrEMBL
Match: A0A6J1HL36 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465137 PE=3 SV=1)

HSP 1 Score: 123 bits (309), Expect = 2.16e-34
Identity = 55/61 (90.16%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          LMCLADLEFDYINPYDSASRINKV+ PEFI++GVLCLFYLLTGHWGMS+LCGPYIYYNVR
Sbjct: 25 LMCLADLEFDYINPYDSASRINKVVMPEFIAIGVLCLFYLLTGHWGMSMLCGPYIYYNVR 84

[Close]

BLAST of Cp4.1LG08g07630 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 105.9 bits (263), Expect = 1.6e-23
Identity = 46/61 (75.41%), Postives = 53/61 (86.89%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          L+CLADLEFDYINPYDSASRIN V+ PEFI  GVLC+FYLLTGHW M++LC PY+YYN  
Sbjct: 17 LVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFH 76

Query: 82 M 83
          +
Sbjct: 77 L 77

[Close]

BLAST of Cp4.1LG08g07630 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 105.9 bits (263), Expect = 1.6e-23
Identity = 46/61 (75.41%), Postives = 53/61 (86.89%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          L+CLADLEFDYINPYDSASRIN V+ PEFI  GVLC+FYLLTGHW M++LC PY+YYN  
Sbjct: 25 LVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFH 84

Query: 82 M 83
          +
Sbjct: 85 L 85

[Close]

BLAST of Cp4.1LG08g07630 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 95.1 bits (235), Expect = 2.7e-20
Identity = 42/61 (68.85%), Postives = 50/61 (81.97%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          L+ LADLEFDYINPYDSASRIN V+ PE I  G LC+FYL+TGHW M++LC PY+YYN  
Sbjct: 25 LISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYNFH 84

Query: 82 M 83
          +
Sbjct: 85 L 85

[Close]

BLAST of Cp4.1LG08g07630 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 89.4 bits (220), Expect = 1.5e-18
Identity = 37/61 (60.66%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          L CLADLEFD INPYD +SRIN+++ PEF   G+LCL+Y+LTGHW M++L  P+++YN+R
Sbjct: 25 LTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYYILTGHWFMAVLSLPHLFYNIR 84

Query: 82 M 83
          +
Sbjct: 85 L 85

[Close]

BLAST of Cp4.1LG08g07630 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 67.8 bits (164), Expect = 4.7e-12
Identity = 27/61 (44.26%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 22 LMCLADLEFDYINPYDSASRINKVIFPEFISMGVLCLFYLLTGHWGMSILCGPYIYYNVR 81
          ++CL DLE DY+NP+++++RIN+++ PEFI  G LCL +LLT HW   ++  P   Y+  
Sbjct: 26 VICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYHAM 85

Query: 82 M 83
          +
Sbjct: 86 L 86

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g07630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3EDD7	2.2e-22	75.41	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q84W04	2.2e-22	75.41	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q8GWT5	3.9e-19	68.85	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
Q9SZ74	2.1e-17	60.66	Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV...	[more]
Q9C7D7	6.6e-11	44.26	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]

BLAST of Cp4.1LG08g07630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005595.1	4.05e-37	100.00	protein cornichon homolog 4-like [Cucurbita maxima] >KAG6596832.1 Protein cornic...	[more]
XP_023539252.1	4.05e-37	100.00	protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022943501.1	1.64e-36	98.36	protein cornichon homolog 4-like [Cucurbita moschata]	[more]
KAG7028361.1	1.50e-35	100.00	Protein cornichon-like 4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008448916.1	1.10e-34	91.80	PREDICTED: protein cornichon homolog 4 isoform X1 [Cucumis melo] >XP_008448917.1...	[more]

BLAST of Cp4.1LG08g07630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KXU1	1.96e-37	100.00	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111498534 PE=...	[more]
A0A6J1FRW5	7.95e-37	98.36	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111448252 P...	[more]
A0A1S3BLR3	5.32e-35	91.80	protein cornichon homolog 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490940 P...	[more]
A0A5D3D7B8	7.24e-35	91.67	Protein cornichon-like protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1HL36	2.16e-34	90.16	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465137 PE=...	[more]

BLAST of Cp4.1LG08g07630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12340.1	1.6e-23	75.41	Cornichon family protein	[more]
AT1G12390.1	1.6e-23	75.41	Cornichon family protein	[more]
AT1G62880.1	2.7e-20	68.85	Cornichon family protein	[more]
AT4G12090.1	1.5e-18	60.66	Cornichon family protein	[more]
AT3G12180.1	4.7e-12	44.26	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 1..82 e-value: 6.9E-6 score: 35.6
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 18..81 e-value: 4.0E-21 score: 75.6
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 7..81
None	No IPR available	PANTHER	PTHR12290:SF30	PROTEIN CORNICHON HOMOLOG 2-RELATED	coord: 7..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g07630.1	Cp4.1LG08g07630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane