Cp4.1LG08g07460 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGTAGAATTTTGAAGAGGTCTAGTGATTGGAATCATTCACGGGTTGCTTAGTCACAATCCCGGCTCTATATAATCCCAACACATCCCACCCTCCAAAGTGCAATTTTATATCAACTTTTTGCATCTCCAAAGAACCCTAACCATGGCTTCCAAATCTTCAGCCATGTTCTTCATCCTCTTAATCTCCATGGCCTTATCATTGCCTCCAATTTACGCTTGTACTCCTTGCACCCAGCCCCACCCTCCTTACCCGCCCTACCACCGCCCTTCCCACCCTAAAATTCCACATCCAAAACCCCACCATCCACCCCACCATGGTGGAGGTGGAGGCGGAGGCGGCGGCGGTGGTGGCAGCCGTGGAGGAGGTGGTGGAGGTGGGGGAGGTGGTAGTCGAGGAGGTGGTGGCGGTGGAGGTGGAGGTGGAGGAGGAGGTCATCAACACCCACCTATTGTGATTCCCCCACCAGTGATCACCCCTTCACCACCATCCACCACTTACCCTCCTTACACTGGCCCTCCTCCAAGCGGCGGAGGTGGTGGTGGTGGTGGAGGAGGAGGAGGCGGAGGAAGTGGTGGTTCAGGTTCAGGGCAATACCCACCACCTCCAGCTCAACCAACATGTCCAATAGATGCATTGAAACTAGGGTTATGTGTGGATGTGCTTGGAGGGTTGGTGCATATTGGGTTAGGGAATCCAGTGGAGAATGCATGCTGTCCAGTGCTTGGAGGGCTGTTGGAGCTTGAAGCAGCCATATGTCTATGCACAACTTTAAGGATTAAGCTTTTGAATCTCAATATATTCATTCCTTTGGCCCTTCAAGCGCTCATCACTTGTGGCAAGAACCCTCCGCCAGGCTTTGTTTGTCCTCCACTTTAGAAATGTGTTATGAGTTTGAATGATTGTTAGCTGTTGTTAATGTTGTTGTAGGTTGTGTTTGATGGGTTTTAATTAACAACTTTTGGGTCTTTTTTGTAGCATTGATCCTTTGGTTTTTTGCTTTTGCATGTCATTGATATAATTTCTCATTTACTAATGAGATCATGATTTAGAACATTTTCTGATTATATGTCTCTCTCAAATTTTCTATTTTGAGTTGAAATTGATTATCCTTTTCTCTCTATAATCATCAAAGTTGGTATGTTTTTTTGGCTAACATGCACTCATAAACTTTGATTTTACACTATACTTTCATTTGCCTTTTTGTGTAGAAAGGAAAGCTTTGA ATGGGACCCCACCCTCCTTACCCGCCCTACCACCGCCCTTCCCACCCTAAAATTCCACATCCAAAACCCCACCATCCACCCCACCATGGTGGAGGGTTGGTGCATATTGGGTTAGGGAATCCAGTGGAGAATGCATGCTGTCCAGTGCTTGGAGGGCTGTTGGAGCTTGAAGCAGCCATATGTCTATGCACAACTTTAAGGATTAAGCTTTTGAATCTCAATATATTCATTCCTTTGGCCCTTCAAGCGCTCATCACTTGTGGCAAGAACCCTCCGCCAGGCTTTAAAGGAAAGCTTTGA ATGGGACCCCACCCTCCTTACCCGCCCTACCACCGCCCTTCCCACCCTAAAATTCCACATCCAAAACCCCACCATCCACCCCACCATGGTGGAGGGTTGGTGCATATTGGGTTAGGGAATCCAGTGGAGAATGCATGCTGTCCAGTGCTTGGAGGGCTGTTGGAGCTTGAAGCAGCCATATGTCTATGCACAACTTTAAGGATTAAGCTTTTGAATCTCAATATATTCATTCCTTTGGCCCTTCAAGCGCTCATCACTTGTGGCAAGAACCCTCCGCCAGGCTTTAAAGGAAAGCTTTGA MGPHPPYPPYHRPSHPKIPHPKPHHPPHHGGGLVHIGLGNPVENACCPVLGGLLELEAAICLCTTLRIKLLNLNIFIPLALQALITCGKNPPPGFKGKL Homology
BLAST of Cp4.1LG08g07460 vs. ExPASy Swiss-Prot
Match: Q00451 (36.4 kDa proline-rich protein OS=Solanum lycopersicum OX=4081 GN=TPRP-F1 PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 2.8e-16 Identity = 54/101 (53.47%), Postives = 66/101 (65.35%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. ExPASy Swiss-Prot
Match: Q9SU35 (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 6.3e-08 Identity = 39/111 (35.14%), Postives = 58/111 (52.25%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. ExPASy Swiss-Prot
Match: Q39176 (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.0e-06 Identity = 41/116 (35.34%), Postives = 59/116 (50.86%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. ExPASy Swiss-Prot
Match: Q9SU33 (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 4.5e-06 Identity = 39/115 (33.91%), Postives = 57/115 (49.57%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. ExPASy Swiss-Prot
Match: Q9SU34 (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 5.9e-06 Identity = 38/115 (33.04%), Postives = 57/115 (49.57%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. NCBI nr
Match: XP_023540189.1 (36.4 kDa proline-rich protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 145 bits (367), Expect = 3.12e-41 Identity = 93/208 (44.71%), Postives = 93/208 (44.71%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. NCBI nr
Match: XP_022943159.1 (36.4 kDa proline-rich protein-like [Cucurbita moschata] >KAG6596852.1 36.4 kDa proline-rich protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028380.1 36.4 kDa proline-rich protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 145 bits (365), Expect = 6.59e-41 Identity = 93/210 (44.29%), Postives = 93/210 (44.29%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. NCBI nr
Match: XP_023005518.1 (36.4 kDa proline-rich protein-like [Cucurbita maxima]) HSP 1 Score: 143 bits (360), Expect = 3.74e-40 Identity = 92/210 (43.81%), Postives = 92/210 (43.81%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. NCBI nr
Match: XP_008448869.1 (PREDICTED: 36.4 kDa proline-rich protein [Cucumis melo]) HSP 1 Score: 135 bits (340), Expect = 2.47e-37 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. NCBI nr
Match: KAA0041099.1 (36.4 kDa proline-rich protein [Cucumis melo var. makuwa] >TYK12010.1 36.4 kDa proline-rich protein [Cucumis melo var. makuwa]) HSP 1 Score: 135 bits (340), Expect = 4.74e-37 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. ExPASy TrEMBL
Match: A0A6J1FTG5 (36.4 kDa proline-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111447971 PE=3 SV=1) HSP 1 Score: 145 bits (365), Expect = 3.19e-41 Identity = 93/210 (44.29%), Postives = 93/210 (44.29%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. ExPASy TrEMBL
Match: A0A6J1L2E2 (36.4 kDa proline-rich protein-like OS=Cucurbita maxima OX=3661 GN=LOC111498481 PE=3 SV=1) HSP 1 Score: 143 bits (360), Expect = 1.81e-40 Identity = 92/210 (43.81%), Postives = 92/210 (43.81%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. ExPASy TrEMBL
Match: A0A1S3BLB9 (36.4 kDa proline-rich protein OS=Cucumis melo OX=3656 GN=LOC103490902 PE=3 SV=1) HSP 1 Score: 135 bits (340), Expect = 1.20e-37 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. ExPASy TrEMBL
Match: A0A5A7TIF5 (36.4 kDa proline-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00190 PE=3 SV=1) HSP 1 Score: 135 bits (340), Expect = 2.30e-37 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. ExPASy TrEMBL
Match: A0A0A0L4A6 (Hydrophob_seed domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G026150 PE=3 SV=1) HSP 1 Score: 135 bits (339), Expect = 3.97e-37 Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. TAIR 10
Match: AT1G62500.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 123.2 bits (308), Expect = 1.1e-28 Identity = 57/65 (87.69%), Postives = 61/65 (93.85%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. TAIR 10
Match: AT2G10940.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 103.2 bits (256), Expect = 1.2e-22 Identity = 44/65 (67.69%), Postives = 57/65 (87.69%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. TAIR 10
Match: AT2G10940.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 103.2 bits (256), Expect = 1.2e-22 Identity = 44/65 (67.69%), Postives = 57/65 (87.69%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. TAIR 10
Match: AT3G22142.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 100.5 bits (249), Expect = 7.9e-22 Identity = 40/66 (60.61%), Postives = 56/66 (84.85%), Query Frame = 0
BLAST of Cp4.1LG08g07460 vs. TAIR 10
Match: AT3G22120.1 (cell wall-plasma membrane linker protein ) HSP 1 Score: 84.7 bits (208), Expect = 4.5e-17 Identity = 51/105 (48.57%), Postives = 65/105 (61.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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