Cp4.1LG08g07340 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACCGGTCCGCAGTCGGAACTTGGCGATGGGTTTAGGGTCAACGAGTCAAACCCAATATCGAATGGCAACCGTCAGATCGATTTGCTAACGAACAATTTTGCACATTGCGTTGGTTACACCGCCATTCTGAGAATCTGTCACTCGCAATCCCAAGCCGATTTGTTTCTCGAAGACCCATTTCCCAGTCCTCCGCGGCATTCACTCTCGAAACTGGGATAAACCGATACAAACAGAGCAAAATCTTCGAAATCCAGTTTAATTTTCATCCATGGCCGACCATTCCGATGATTTACACGAACTGCTTGACAGTATGCCTTCAAACTTCATGCAATACGTAGTGGGTTTCCATTTCTTTAACGTTTTTCTTCATGTTTGTTATGAATTTGTCTCGGATTGTCTCAGGTGCTTTGGACGATTTTCGGAAAATCGACCCTAACCATTCCGTTTCGAGGTTTATATCAATCAATTTCTGTGTTGGAAGCTATGTTTTGTAGCGTATTTAGTTGGATTCTTGATGTTTTTAGTTGTGTGGTGTTGTAGAAATGGAGATGGGGCGGAGAGTAGAGGGGCTCTTCCTTCTGGAGTTCAAGGTTTAGGGTTGGGTTTGCCTGACTTGAGGAGCATGAAAAAAGGGAAGCAGAAGGTTTCGAAGGAATCGCATGTGTATGAGGCTCTTGATAAGCTTAGAGAACAGACCAGAGAGGCCGTCAAGGGGCTTGAATCGGTCACTGGCCCTAAAGCTGGTGGTGATGATTTTGGTCAAGATGCTTTGATGGAAGATTGGGTGAAGCAGTTCGAGGAGATGGCTGGCTCTCAGGTACATTGCTTGAAAAGCCTTTGGAACTTTTCAATGTTGAATTTGACCTTTAGTGGAAATACTTTTCCTAGTTTTGATGTGGCTTAAACGAATCACGAACTTCGCAATAGTATGATATTGTCACCTTGAGCTTTCATGGTTTTTCTTTTGGCTTCCCTAAAAGGTCTCGTATCAATGGAGATGTATTCCTTACTTATATATGAACTTATGATCAACTCTTAATTAGCCAATGTGGGATTCCTCTTCCGACAATCCTCCCCTCGAACAAAGTACACCATAGAGCCTCTCCTAAGGCCTATGGAGCCCTCGAACAACCTCCCCTTAATTAAGGCTCGACTCGTTCTCTGGAGCCTTCGAACAAAGTACACCATTTGTTCGACACTTGAGTCACTTTTGACTACACTTTTGAGGGTCTCAACTTCTTTGTTCGACATTTGAGGATTCTTGCTAAGTTAAGGGCATGACTCTGATACCATGTTAGGAATCACGACCCTCTACAATGGTATGATATTGTCCACTTTAAGCATAACCTCTCGTGGCTTTGCTTTTGGTTTCCCCAAAAGGCCTCATACCATTGGAGATATATTCCTTACTTATATATAAACCCATGATCAATCCCTTAATTAGCGGATGCAAAACTCCTCTTCCAACAATCCTCAACAATTTTGTAATATTATGTGTTTAGATGCTGACTTAGGGTGAGTTTGGCATGAAGTTCACTGGGATGTACTTTTAGCCGATTAAACTCTTTTCATGGTCTTTTAAGAATACTTTTATGCTATTTGGTCCACAGTTTTGAGGCCTTTCTTCTGAAAATGCTCGTAGAGAAGTGCAGAGAATAAAGATACTGGGAGTTTCCATTGTTCCCATCAGAATCTTCTTTCTTGATCCGTTATCTTAAATTACCTCCATATCACTTGCTTTATTGCAAGATTGCCTTTAGAAGGACAATATGTTTTTTTGGATATCCTTTTTCATATTTTGCTTTGGGTCCCTCAATTATTGTATAACACCCTAAGCCCACCGCTAGATATTGTCCTCTTTAGGCTTTCCCTTTTGGGGTTCCCCTCAAGATTTTTAAAACACGTCTGCGAGGGTGAGGTTTCCACACCTTTATAAAGGGTGTTTCGTTCTCCTCCCCAACTAATGTAGGATCTCACAATCCATCCTCCTTCGGGGCCTAGCGTCCTCACTGCCACTCGTTCCCTCCTTCCATCGATGTGGGACCTCCCAATCCACCCCCTTCGAGCCCAGCGTCCTTGTTGGCACACCACCTCGTGTCCACCTTCTTCGGGGCTCAGCCTTCTCGCTGGCACATCGCCCGGTGTCTGGCTCTGATACCATTTGTAACGGCTTAAGCCCACCGCTAGCAGATATTGTTCTCTTTGAACTTTCCCTTTCGAGCTTTCCCTTAAGGTTTTTAAAACACGTATGCTAGGGAGAAGTTTCCACACCCTTATAAAGGGGGTTCTGTTTTCCTCCCCAACCGATGTGAGTTCCTTTTTCCTTCCAACCTTTAGACCCTTGAGATTCCGATTTATATAGTGCAGTTATATGGAGTCTTAACTTGTATTAAGGAGTTGTTTTACGTATTAAGTTTGTTTTTGGAATCAATCACTGCTTTGCTTTATTAATGAGTTATAATATGAGTTGGCTGCGGCTACCAAATGTTCCTCCTTTATTAGTAACACTTAGCTTAGGTCTCTTTGGGGACATCCGATACAATTGGAACTTTATAGAGATGATAACACATAAAATGGTGGAAGGTATCCATAGAGGAACATTCACGCCTTCTAGTTCTCAATTCAGCTTTTTTGATACTCGGTTTTCGTATCTCCCTCCTTGCATTGATACTCACCCTCCCATTAATCTCTTGGAACTCTAACATGCACTATTTCTTCAACCATAGAACATGGAGTTGATGGTCGAGACGATGATGCAACAGCTTCTATCCAAAGAGATTCTCCTTGAACCAGTGAAGGAAATAGGAGAAAGATATCCCAAATGGTTGGAGGAGCATAAAGCAAGTTTGAGCAAAGAAGAATACGAACGCTATTCGCAGCAACACGAACTGATAAAAGATCTCAACATCGTGTATGAAAACGAACCCGATAACTTCGACAAAATTGTCGAGCTGATGCAGAAAATGCAAGAATGTGGTCAGCCACCAAATGATATTGTGCAAGAGCTGGGACCTGATTTCGATTTAACTAATCTCGCACAATTGTGAGTTTATTGTTCTCATGTTTTGAATTAGCTGATTATTTGTGCTGTCAATAATTAACATATTATTTGCTTGCAGATCTCCTGAGATGTTGGAGTCTCAGACAAATTGTTGTATAATGTGAGGTAAGGCTTTTGGATGCTCTAATTTGTGGTGCTTCCTTCCATTTATTCTCATATTTGCTCAGAAATATTATTGACTCAAACAAATTACTTTGTCCAATAATCATGTGTTCAATTTCAATGTTTATTGGACTCGGAATGGATATCTCTCTCTCACACACACACACATGAGATTTTTGTTGTATCAGAAGTGATTTCTTCTATCTTCTCTGTTGTGCCATTGCTCTGGCTTGAATCTTGCAC CACCGGTCCGCAGTCGGAACTTGGCGATGGGTTTAGGGTCAACGAGTCAAACCCAATATCGAATGGCAACCGTCAGATCGATTTGCTAACGAACAATTTTGCACATTGCGTTGGTTACACCGCCATTCTGAGAATCTGTCACTCGCAATCCCAAGCCGATTTGTTTCTCGAAGACCCATTTCCCAGTCCTCCGCGGCATTCACTCTCGAAACTGGGATAAACCGATACAAACAGAGCAAAATCTTCGAAATCCAGTTTAATTTTCATCCATGGCCGACCATTCCGATGATTTACACGAACTGCTTGACAGTGCTTTGGACGATTTTCGGAAAATCGACCCTAACCATTCCGTTTCGAGAAATGGAGATGGGGCGGAGAGTAGAGGGGCTCTTCCTTCTGGAGTTCAAGGTTTAGGGTTGGGTTTGCCTGACTTGAGGAGCATGAAAAAAGGGAAGCAGAAGGTTTCGAAGGAATCGCATGTGTATGAGGCTCTTGATAAGCTTAGAGAACAGACCAGAGAGGCCGTCAAGGGGCTTGAATCGGTCACTGGCCCTAAAGCTGGTGGTGATGATTTTGGTCAAGATGCTTTGATGGAAGATTGGGTGAAGCAGTTCGAGGAGATGGCTGGCTCTCAGAACATGGAGTTGATGGTCGAGACGATGATGCAACAGCTTCTATCCAAAGAGATTCTCCTTGAACCAGTGAAGGAAATAGGAGAAAGATATCCCAAATGGTTGGAGGAGCATAAAGCAAGTTTGAGCAAAGAAGAATACGAACGCTATTCGCAGCAACACGAACTGATAAAAGATCTCAACATCGTGTATGAAAACGAACCCGATAACTTCGACAAAATTGTCGAGCTGATGCAGAAAATGCAAGAATGTGGTCAGCCACCAAATGATATTGTGCAAGAGCTGGGACCTGATTTCGATTTAACTAATCTCGCACAATTATCTCCTGAGATGTTGGAGTCTCAGACAAATTGTTGTATAATGTGAGGTAAGGCTTTTGGATGCTCTAATTTGTGGTGCTTCCTTCCATTTATTCTCATATTTGCTCAGAAATATTATTGACTCAAACAAATTACTTTGTCCAATAATCATGTGTTCAATTTCAATGTTTATTGGACTCGGAATGGATATCTCTCTCTCACACACACACACATGAGATTTTTGTTGTATCAGAAGTGATTTCTTCTATCTTCTCTGTTGTGCCATTGCTCTGGCTTGAATCTTGCAC ATGGCCGACCATTCCGATGATTTACACGAACTGCTTGACAGTGCTTTGGACGATTTTCGGAAAATCGACCCTAACCATTCCGTTTCGAGAAATGGAGATGGGGCGGAGAGTAGAGGGGCTCTTCCTTCTGGAGTTCAAGGTTTAGGGTTGGGTTTGCCTGACTTGAGGAGCATGAAAAAAGGGAAGCAGAAGGTTTCGAAGGAATCGCATGTGTATGAGGCTCTTGATAAGCTTAGAGAACAGACCAGAGAGGCCGTCAAGGGGCTTGAATCGGTCACTGGCCCTAAAGCTGGTGGTGATGATTTTGGTCAAGATGCTTTGATGGAAGATTGGGTGAAGCAGTTCGAGGAGATGGCTGGCTCTCAGAACATGGAGTTGATGGTCGAGACGATGATGCAACAGCTTCTATCCAAAGAGATTCTCCTTGAACCAGTGAAGGAAATAGGAGAAAGATATCCCAAATGGTTGGAGGAGCATAAAGCAAGTTTGAGCAAAGAAGAATACGAACGCTATTCGCAGCAACACGAACTGATAAAAGATCTCAACATCGTGTATGAAAACGAACCCGATAACTTCGACAAAATTGTCGAGCTGATGCAGAAAATGCAAGAATGTGGTCAGCCACCAAATGATATTGTGCAAGAGCTGGGACCTGATTTCGATTTAACTAATCTCGCACAATTATCTCCTGAGATGTTGGAGTCTCAGACAAATTGTTGTATAATGTGA MADHSDDLHELLDSALDDFRKIDPNHSVSRNGDGAESRGALPSGVQGLGLGLPDLRSMKKGKQKVSKESHVYEALDKLREQTREAVKGLESVTGPKAGGDDFGQDALMEDWVKQFEEMAGSQNMELMVETMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEEYERYSQQHELIKDLNIVYENEPDNFDKIVELMQKMQECGQPPNDIVQELGPDFDLTNLAQLSPEMLESQTNCCIM Homology
BLAST of Cp4.1LG08g07340 vs. ExPASy Swiss-Prot
Match: Q94EI3 (Peroxisome biogenesis protein 19-2 OS=Arabidopsis thaliana OX=3702 GN=PEX19-2 PE=1 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 1.2e-81 Identity = 155/244 (63.52%), Postives = 198/244 (81.15%), Query Frame = 0
BLAST of Cp4.1LG08g07340 vs. ExPASy Swiss-Prot
Match: Q9SRQ3 (Peroxisome biogenesis protein 19-1 OS=Arabidopsis thaliana OX=3702 GN=PEX19-1 PE=1 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 4.0e-80 Identity = 158/248 (63.71%), Postives = 199/248 (80.24%), Query Frame = 0
BLAST of Cp4.1LG08g07340 vs. ExPASy Swiss-Prot
Match: Q9QYU1 (Peroxisomal biogenesis factor 19 OS=Rattus norvegicus OX=10116 GN=Pex19 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.5e-15 Identity = 80/284 (28.17%), Postives = 134/284 (47.18%), Query Frame = 0
BLAST of Cp4.1LG08g07340 vs. ExPASy Swiss-Prot
Match: P40855 (Peroxisomal biogenesis factor 19 OS=Homo sapiens OX=9606 GN=PEX19 PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 3.4e-15 Identity = 80/289 (27.68%), Postives = 134/289 (46.37%), Query Frame = 0
BLAST of Cp4.1LG08g07340 vs. ExPASy Swiss-Prot
Match: Q5R7U2 (Peroxisomal biogenesis factor 19 OS=Pongo abelii OX=9601 GN=PEX19 PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 5.8e-15 Identity = 79/289 (27.34%), Postives = 133/289 (46.02%), Query Frame = 0
BLAST of Cp4.1LG08g07340 vs. NCBI nr
Match: XP_023539043.1 (peroxisome biogenesis protein 19-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 476 bits (1224), Expect = 4.25e-169 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Cp4.1LG08g07340 vs. NCBI nr
Match: KAG7028388.1 (Peroxisome biogenesis protein 19-1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 461 bits (1186), Expect = 2.64e-163 Identity = 235/242 (97.11%), Postives = 238/242 (98.35%), Query Frame = 0
BLAST of Cp4.1LG08g07340 vs. NCBI nr
Match: KAG6596860.1 (Peroxisome biogenesis protein 19-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 460 bits (1184), Expect = 5.33e-163 Identity = 235/242 (97.11%), Postives = 238/242 (98.35%), Query Frame = 0
BLAST of Cp4.1LG08g07340 vs. NCBI nr
Match: XP_022958076.1 (peroxisome biogenesis protein 19-1-like [Cucurbita moschata]) HSP 1 Score: 456 bits (1172), Expect = 3.60e-161 Identity = 232/242 (95.87%), Postives = 237/242 (97.93%), Query Frame = 0
BLAST of Cp4.1LG08g07340 vs. NCBI nr
Match: XP_038906370.1 (peroxisome biogenesis protein 19-1-like [Benincasa hispida]) HSP 1 Score: 419 bits (1077), Expect = 1.08e-146 Identity = 214/242 (88.43%), Postives = 227/242 (93.80%), Query Frame = 0
BLAST of Cp4.1LG08g07340 vs. ExPASy TrEMBL
Match: A0A6J1H106 (peroxisome biogenesis protein 19-1-like OS=Cucurbita moschata OX=3662 GN=LOC111459389 PE=4 SV=1) HSP 1 Score: 456 bits (1172), Expect = 1.74e-161 Identity = 232/242 (95.87%), Postives = 237/242 (97.93%), Query Frame = 0
BLAST of Cp4.1LG08g07340 vs. ExPASy TrEMBL
Match: A0A6J1HN20 (peroxisome biogenesis protein 19-2-like OS=Cucurbita maxima OX=3661 GN=LOC111465099 PE=4 SV=1) HSP 1 Score: 417 bits (1071), Expect = 4.31e-146 Identity = 215/242 (88.84%), Postives = 225/242 (92.98%), Query Frame = 0
BLAST of Cp4.1LG08g07340 vs. ExPASy TrEMBL
Match: A0A5D3CJA6 (Peroxisome biogenesis protein 19-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00320 PE=4 SV=1) HSP 1 Score: 416 bits (1070), Expect = 6.12e-146 Identity = 213/242 (88.02%), Postives = 226/242 (93.39%), Query Frame = 0
BLAST of Cp4.1LG08g07340 vs. ExPASy TrEMBL
Match: A0A1S3BKN2 (peroxisome biogenesis protein 19-1-like OS=Cucumis melo OX=3656 GN=LOC103490885 PE=4 SV=1) HSP 1 Score: 416 bits (1070), Expect = 6.12e-146 Identity = 213/242 (88.02%), Postives = 226/242 (93.39%), Query Frame = 0
BLAST of Cp4.1LG08g07340 vs. ExPASy TrEMBL
Match: A0A6J1E6H4 (peroxisome biogenesis protein 19-2-like OS=Cucurbita moschata OX=3662 GN=LOC111431048 PE=4 SV=1) HSP 1 Score: 414 bits (1064), Expect = 5.02e-145 Identity = 213/242 (88.02%), Postives = 225/242 (92.98%), Query Frame = 0
BLAST of Cp4.1LG08g07340 vs. TAIR 10
Match: AT5G17550.1 (peroxin 19-2 ) HSP 1 Score: 304.3 bits (778), Expect = 8.8e-83 Identity = 155/244 (63.52%), Postives = 198/244 (81.15%), Query Frame = 0
BLAST of Cp4.1LG08g07340 vs. TAIR 10
Match: AT3G03490.1 (peroxin 19-1 ) HSP 1 Score: 299.3 bits (765), Expect = 2.8e-81 Identity = 158/248 (63.71%), Postives = 199/248 (80.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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