Cp4.1LG08g07300 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGGCATTGGCGTCGATTTGATTGAGGCTAAGGCCTGGTTCTTCTCGAAGTAGAGCAGCGATTGATATCAAAGGGGCTCGGATTTTTCATCGTTCAATGGAGGGAGATAGCATTACTCGATTTCAGTCCTCTGGTACTGTTCGTTTCTATTTCTGTAGTGGATTTATGGAGTTTGTTCGTGCTTCTTTTCGAATCCCCAAAATTTGATTTCGTTTGCTGTGTTATTGCAGCGGATTCGTTTGTTGGACATGAGTTGTGAGCCTTGTGGAGCTCGGAAGAGATATGGCCCTCATTCGGAGAGTTTCGTCGAGCTTTCCTCGAGTTGTTGGGTTTGGTAACAGGGCCTTGTATTCTTTGAATTCTCCTTGTGAGTCGTTGGACTCCCCGACCTCTTCCTCTTTTGTTCATGGAATCCATGTCTTCCATTGTCCTGTAAGTTCTGCTGTAGCGGTAATTTTCATTACATTTTTGGTTCGGTTGCTGATTGAATTAGACTGCTTCAACAACTCTATGCTCTGTTCTTATATGCTTTGATATTTCCAAGTTGGGATATAAAGATAAGGCGCAAATTTCTTGTTGAGACTTATATTGTTGTTCGTGGGGGTGTACAGTTTTGGAAGTATAAGGTGCAAATTGAATTGGTTTTGTGATAGGATGCTGTGGGAATCGTTGCTAAGTTGTCGGAGTGTATAGCTTCAAGAGGGGGAAACATACTAAATGCTGATGTTTTTGTACCTGAAAACAAGAGCGTCTTCCATTACAGAAGGTAATTTTTGGCTTCTTTTGCTTGTGGTGCTTTCTGAATAAGTCGTTTTATATGCTGGTACTATGTAGCTGCCATGTTTTTTTCTCTGTGTTAGTACGGGGTTTATAGATGATATGAAGCTAAAACAAGGAAAGAAAGTCAAGCTACAGCTAATAAATAAATCACTCAATTGATAAAGAGTATTAATAAAGTACTTCTTAGTAGGAAAGACAAGTTTACACCAAGAAATAATAGTCGGTAGATGCTATAGGCTAATAAATAAATAACTCAAGTGACATAGAGTATTAACCGTGAGCTCTTATACCATTTGTACTGGCCCAAGCCCACCGTTAGTAGATATTGTTTGCTTTGACCTGTTATGTATCGCCATTAGCCTCCCGATTTTTAAAACGCATCTATTAGGGAGAGGTTTCCACACTCTTATAAGGAATGCTTCGTTTCCGTCTGATATGTGATCTCACAATCACACCCATTGGGACCACGTCCTCGTTGGCACACCGTCCGGTGTCTGGTTCTGATACCATTTGTAACAGCTCAAGCCCACCGCTAGTAGATATTGTCCGCTTTGGACCGTTACTTATTGCCATCAGTCTCACGGTTTTTAAAATGCGTCTGCTAGGGAGAAGTTTCCATACCTATAAGGAATGCTTCGTTCCCTTCTCCAACCGACGTGGGACCTCACATTATAGATCCTATTATTCCTTTGGACTCGAAGATTCAAAAAAATGCAATTTTTGTAACTATACTAGTCATGTTGCGGTGATCTCATTAAATTAAATGACATTGCAACTTGATTAGGGGTCTTTGAGGAATTAACAAAAAATATGATCCATTGTCGATTGAATAAAAAGGAGGTGTCTGTTAATGCGTTATCATCGACAAAGTTGCAGACTCATTTCTTGGCCATAGTATACCCAACTTTCAATTTTGTAATCTAACTTACACAATTGCATATAAGGCTTAAGTCAATCTATTCAGACAAGAAAGACGTCCATGTTCATATTTCATTTTCTACTAGATTTTTTCTTATATCTCTAGAAGTCATATCCTCCTTTCAGAAAGCATTCCTTATATTCTATCAGGAGTAGTCGATAAATTTCAAGAGTGAAACTTTATCTTGTATTCAAGGGTGTTACTGAGGACTTGCATTAGTAACTACAATATTACAATCGTACAACCAGAATACTTCTTCATTTCAAGCTAGAAATGCAAGTCATGAATTGAATCAGGCTAGTCTTCAATAATATCCCAGAAAGGAACAAACCAGTACAATTTTTGGTTTGTGGCCAGTCAACCTGGTTGTGATGAATATTAGGTTGAGCCTTATATCTTCGGGGAAGTAGTTTGAATTTCTCTAGTGCACTATGCTGTACTTTTCTTGACATTCAAGCTTGAACTCATGTCTGACTTTCGCTTTATGTGCAGCCAGTTCCTTTTTGATCCTCGTAAGTGGCCAAGGATGCAAATGGATGAAGATTTCCTTAGGATTTCAAAATTATTTAACGCTTGGAAGTCTGTTGTCCGGGTGCCAGATCAAGACACCAAATATAAGATTGCGATTCTTGCTTCAAAACATGTATACCTCTCAATTTCATGTCATAAACTTCTTTTGTTTTGATATTAACATTACTTTTCCCATTGCAGGATCATTGTCTGGTTGACCTACTTCATCAGTGGCAAAGAGGGAACCTACCAGTGGAAATAACTTGTGTTGTCAGGTAAATTTTCTGAAACTTCTTTTAATTAGTTTTGAAGTGCCCATAAACTTTCTTCTCAATCCACTTGTTTCAGTAATCATGAGAGAGCCCCCAATACCCATGTGATGTGCTTTCTTGAAAGGCATGGTATTGCTTATCATTATTTGCAAACATACAATGACAATAAGAGAGAAGGAGAGATATTGGAATTGGTGAAGAATACTGATTTTTTAGTACTTGCCAGGTACATGCAGGTAAATTAGATCATAATACTAGTGCATTTTTACCAGCTTAGTTCTTTAGAAAAAAAAAAAACTTGTGGATAATTGTGTTGTTCCAAATCATACATACAAAGACAGATGAACAAAGTAAATGGATGTTGCAAATGAAGTCTGATGCAGTTTCTTTGTTTTTAAGTGATTGATTGTGAAATTAAATATCTGATCCTGGTAATTTTCAATTTTCTTTGCAGGTATTATCTGGTGATTTCTTGAAGAGCTATGGGAATGATATAATTAACATCCACCATGGTCTCTTGCCTTCATTCAAAGGGAGTAATCCTTCAAAACAGGTTCGGAACATTGTCTGGTTTTCTAGTTACATAATCCATCAACCCACCCCAATTATCTGGTGAGATTCCACTTCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGTGTGAAAACCTCTCCCTAGCAGACACGTTTTAAAAACCTTGAGGGAAAGTCCAAAAAGGACAATATTTACTAGCGGTGAACTTAGGCTGTTACCAATGGTATCTGAGCTAGACACCGGGCGATGTGCCAGTGAGGAGGTTGAGCCCCAAAGGGGGGTGGACACGAGGCGGTGTGCTAGCAAAGACGTTGTGCCCCACATCGATTGGAGAAGGAAACGAGTGCCAGCGAGGACGCTGGGTCCCGAAGGGGGATGGATTGTGAGATCCCACATCGGTTGGGGGAGGAGAACGAAACATTCTTTACAAGCGTGTGAAAATCTCTCCCTAACAGACGCAACATTTTAGTTGCATTTTAAAATTCTGAGGGAAAGCCCGAAAGGGAAAGTCCACACAGGACAATATCTGCTAGCAGTGGACTTGGACCGTTACATATCTTTTTTGCTTTTACCATAACTGTGCAACTGTCGTTGATTATTTAATTTGTTATATTACATTGACAGGCGTTTAATGCTGGCGTAAAGTTAATTGGTGCTACGGCCCATTTTGTGACCGAAGAACTTGATGCTGGACCCATCATTGAGCAGATGGTATCTTTTAGGCTGTTTGATGCAACTAAATTTGCTTGTTCTCTATTGTCTTGGTCTTTATTTGTGAACCATGAGTAGCCCTTTTTTCTGAGATTATAAACCATTTCATTCTTAACCCTTTTTTTTCTAGTGAACTATTAAGGGCATGTTTCATAGTGTTTTTGAACCGTTAAAATCACTTTTGTCGTATTCAAGATAACTTTGCACTTAATCATTCAAAATCATTTTAATGTTTGATCGTACCTTTTTAAATACGATTTACGCACCATCAAAATTGACTTCTAGTGACCAAATAAATTATAAAATTACTCTTTACCTTTGTTTTTTTTTTTTTTTTAAATATATCCATGTTTTTTTCAAAAGTTGATGGTGATATAGCTGCTGTACAGCTCTAGAAAGCATGTTAGAATCTTTTCATCAATTTAACTATGTTTCTGTTCAAAATTATCAGGTTGAAAGGGTTTCCCACAGAGATAATTTGCAGAGCTTTGTACAAAAGTCAGAGAACCTAGAAAAGCAATGCCTAACAAACGCAATTAAATCATACTGTGAACTGCGCGTCTTACCATACGAGAAGAACAGGACTGTCGTCTTTTAAGAGAATGAGGAAGTATTTTTCAATCAATATACTCTTGATGGTATACTTCATATATTGATTTCAAATTTCAATTTATAGATACCTATACCTCTACCTCAACTTGTTTCAACTGAACTAGCAAGTTACAAGATGAATAAATAGATCTTTTTAACTCTCGTTTTTGCAATTTTAGAAATGTTGTAGTTTGACAGCTAAAATATTTCATATTATCTTGTCTATTCTTTTGATTGTTTGGTCTGAGAACATTCGAGGATGTCTGAGTTTTGAATTTGGGGAACTGTTAGATTCTAGCCAAGTGTTTCAGG TGTGGCATTGGCGTCGATTTGATTGAGGCTAAGGCCTGGTTCTTCTCGAAGTAGAGCAGCGATTGATATCAAAGGGGCTCGGATTTTTCATCGTTCAATGGAGGGAGATAGCATTACTCGATTTCAGTCCTCTGCGGATTCGTTTGTTGGACATGAGTTGTGAGCCTTGTGGAGCTCGGAAGAGATATGGCCCTCATTCGGAGAGTTTCGTCGAGCTTTCCTCGAGTTGTTGGGTTTGGTAACAGGGCCTTGTATTCTTTGAATTCTCCTTGTGAGTCGTTGGACTCCCCGACCTCTTCCTCTTTTGTTCATGGAATCCATGTCTTCCATTGTCCTGATGCTGTGGGAATCGTTGCTAAGTTGTCGGAGTGTATAGCTTCAAGAGGGGGAAACATACTAAATGCTGATGTTTTTGTACCTGAAAACAAGAGCGTCTTCCATTACAGAAGCCAGTTCCTTTTTGATCCTCGTAAGTGGCCAAGGATGCAAATGGATGAAGATTTCCTTAGGATTTCAAAATTATTTAACGCTTGGAAGTCTGTTGTCCGGGTGCCAGATCAAGACACCAAATATAAGATTGCGATTCTTGCTTCAAAACATGATCATTGTCTGGTTGACCTACTTCATCAGTGGCAAAGAGGGAACCTACCAGTGGAAATAACTTGTGTTGTCAGTAATCATGAGAGAGCCCCCAATACCCATGTGATGTGCTTTCTTGAAAGGCATGGTATTGCTTATCATTATTTGCAAACATACAATGACAATAAGAGAGAAGGAGAGATATTGGAATTGGTGAAGAATACTGATTTTTTAGTACTTGCCAGGTACATGCAGGTATTATCTGGTGATTTCTTGAAGAGCTATGGGAATGATATAATTAACATCCACCATGGTCTCTTGCCTTCATTCAAAGGGAGTAATCCTTCAAAACAGGCGTTTAATGCTGGCGTAAAGTTAATTGGTGCTACGGCCCATTTTGTGACCGAAGAACTTGATGCTGGACCCATCATTGAGCAGATGGTTGAAAGGGTTTCCCACAGAGATAATTTGCAGAGCTTTGTACAAAAGTCAGAGAACCTAGAAAAGCAATGCCTAACAAACGCAATTAAATCATACTGTGAACTGCGCGTCTTACCATACGAGAAGAACAGGACTGTCGTCTTTTAAGAGAATGAGGAAGTATTTTTCAATCAATATACTCTTGATGGTATACTTCATATATTGATTTCAAATTTCAATTTATAGATACCTATACCTCTACCTCAACTTGTTTCAACTGAACTAGCAAGTTACAAGATGAATAAATAGATCTTTTTAACTCTCGTTTTTGCAATTTTAGAAATGTTGTAGTTTGACAGCTAAAATATTTCATATTATCTTGTCTATTCTTTTGATTGTTTGGTCTGAGAACATTCGAGGATGTCTGAGTTTTGAATTTGGGGAACTGTTAGATTCTAGCCAAGTGTTTCAGG ATGGCCCTCATTCGGAGAGTTTCGTCGAGCTTTCCTCGAGTTGTTGGGTTTGGTAACAGGGCCTTGTATTCTTTGAATTCTCCTTGTGAGTCGTTGGACTCCCCGACCTCTTCCTCTTTTGTTCATGGAATCCATGTCTTCCATTGTCCTGATGCTGTGGGAATCGTTGCTAAGTTGTCGGAGTGTATAGCTTCAAGAGGGGGAAACATACTAAATGCTGATGTTTTTGTACCTGAAAACAAGAGCGTCTTCCATTACAGAAGCCAGTTCCTTTTTGATCCTCGTAAGTGGCCAAGGATGCAAATGGATGAAGATTTCCTTAGGATTTCAAAATTATTTAACGCTTGGAAGTCTGTTGTCCGGGTGCCAGATCAAGACACCAAATATAAGATTGCGATTCTTGCTTCAAAACATGATCATTGTCTGGTTGACCTACTTCATCAGTGGCAAAGAGGGAACCTACCAGTGGAAATAACTTGTGTTGTCAGTAATCATGAGAGAGCCCCCAATACCCATGTGATGTGCTTTCTTGAAAGGCATGGTATTGCTTATCATTATTTGCAAACATACAATGACAATAAGAGAGAAGGAGAGATATTGGAATTGGTGAAGAATACTGATTTTTTAGTACTTGCCAGGTACATGCAGGTATTATCTGGTGATTTCTTGAAGAGCTATGGGAATGATATAATTAACATCCACCATGGTCTCTTGCCTTCATTCAAAGGGAGTAATCCTTCAAAACAGGCGTTTAATGCTGGCGTAAAGTTAATTGGTGCTACGGCCCATTTTGTGACCGAAGAACTTGATGCTGGACCCATCATTGAGCAGATGGTTGAAAGGGTTTCCCACAGAGATAATTTGCAGAGCTTTGTACAAAAGTCAGAGAACCTAGAAAAGCAATGCCTAACAAACGCAATTAAATCATACTGTGAACTGCGCGTCTTACCATACGAGAAGAACAGGACTGTCGTCTTTTAA MALIRRVSSSFPRVVGFGNRALYSLNSPCESLDSPTSSSFVHGIHVFHCPDAVGIVAKLSECIASRGGNILNADVFVPENKSVFHYRSQFLFDPRKWPRMQMDEDFLRISKLFNAWKSVVRVPDQDTKYKIAILASKHDHCLVDLLHQWQRGNLPVEITCVVSNHERAPNTHVMCFLERHGIAYHYLQTYNDNKREGEILELVKNTDFLVLARYMQVLSGDFLKSYGNDIINIHHGLLPSFKGSNPSKQAFNAGVKLIGATAHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSENLEKQCLTNAIKSYCELRVLPYEKNRTVVF Homology
BLAST of Cp4.1LG08g07300 vs. ExPASy Swiss-Prot
Match: F4JP46 (Formyltetrahydrofolate deformylase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PURU2 PE=1 SV=1) HSP 1 Score: 475.7 bits (1223), Expect = 4.2e-133 Identity = 236/328 (71.95%), Postives = 268/328 (81.71%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. ExPASy Swiss-Prot
Match: Q93YQ3 (Formyltetrahydrofolate deformylase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PURU1 PE=1 SV=1) HSP 1 Score: 470.3 bits (1209), Expect = 1.8e-131 Identity = 230/326 (70.55%), Postives = 267/326 (81.90%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. ExPASy Swiss-Prot
Match: O34990 (Formyltetrahydrofolate deformylase OS=Bacillus subtilis (strain 168) OX=224308 GN=purU PE=3 SV=2) HSP 1 Score: 200.3 bits (508), Expect = 3.4e-50 Identity = 112/283 (39.58%), Postives = 169/283 (59.72%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. ExPASy Swiss-Prot
Match: Q55135 (Formyltetrahydrofolate deformylase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=purU PE=3 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.1e-48 Identity = 109/282 (38.65%), Postives = 166/282 (58.87%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. ExPASy Swiss-Prot
Match: P0A5T7 (Formyltetrahydrofolate deformylase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=purU PE=3 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.1e-40 Identity = 106/286 (37.06%), Postives = 158/286 (55.24%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. NCBI nr
Match: XP_023539074.1 (formyltetrahydrofolate deformylase 1, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023539075.1 formyltetrahydrofolate deformylase 1, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 669 bits (1727), Expect = 5.93e-243 Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. NCBI nr
Match: XP_022950421.1 (formyltetrahydrofolate deformylase 1, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 664 bits (1713), Expect = 8.09e-241 Identity = 323/326 (99.08%), Postives = 325/326 (99.69%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. NCBI nr
Match: XP_023005468.1 (formyltetrahydrofolate deformylase 2, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 655 bits (1689), Expect = 3.69e-237 Identity = 318/326 (97.55%), Postives = 322/326 (98.77%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. NCBI nr
Match: XP_038905791.1 (formyltetrahydrofolate deformylase 1, mitochondrial-like [Benincasa hispida] >XP_038905792.1 formyltetrahydrofolate deformylase 1, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 609 bits (1570), Expect = 5.08e-219 Identity = 294/326 (90.18%), Postives = 311/326 (95.40%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. NCBI nr
Match: XP_004147219.1 (formyltetrahydrofolate deformylase 1, mitochondrial [Cucumis sativus] >KGN55850.1 hypothetical protein Csa_009590 [Cucumis sativus]) HSP 1 Score: 606 bits (1563), Expect = 5.93e-218 Identity = 294/326 (90.18%), Postives = 309/326 (94.79%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. ExPASy TrEMBL
Match: A0A6J1GES7 (formyltetrahydrofolate deformylase 1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111453499 PE=4 SV=1) HSP 1 Score: 664 bits (1713), Expect = 3.91e-241 Identity = 323/326 (99.08%), Postives = 325/326 (99.69%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. ExPASy TrEMBL
Match: A0A6J1L297 (formyltetrahydrofolate deformylase 2, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111498446 PE=4 SV=1) HSP 1 Score: 655 bits (1689), Expect = 1.79e-237 Identity = 318/326 (97.55%), Postives = 322/326 (98.77%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. ExPASy TrEMBL
Match: A0A0A0L1I1 (Formyl_trans_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G019900 PE=4 SV=1) HSP 1 Score: 606 bits (1563), Expect = 2.87e-218 Identity = 294/326 (90.18%), Postives = 309/326 (94.79%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. ExPASy TrEMBL
Match: A0A1S3BKL6 (formyltetrahydrofolate deformylase 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490874 PE=4 SV=1) HSP 1 Score: 604 bits (1558), Expect = 1.66e-217 Identity = 294/326 (90.18%), Postives = 307/326 (94.17%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. ExPASy TrEMBL
Match: A0A6J1HMR7 (formyltetrahydrofolate deformylase 1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111465065 PE=4 SV=1) HSP 1 Score: 603 bits (1556), Expect = 3.35e-217 Identity = 293/326 (89.88%), Postives = 307/326 (94.17%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. TAIR 10
Match: AT4G17360.1 (Formyl transferase ) HSP 1 Score: 475.7 bits (1223), Expect = 3.0e-134 Identity = 236/328 (71.95%), Postives = 268/328 (81.71%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. TAIR 10
Match: AT5G47435.2 (formyltetrahydrofolate deformylase, putative ) HSP 1 Score: 470.3 bits (1209), Expect = 1.2e-132 Identity = 230/326 (70.55%), Postives = 267/326 (81.90%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. TAIR 10
Match: AT5G47435.1 (formyltetrahydrofolate deformylase, putative ) HSP 1 Score: 470.3 bits (1209), Expect = 1.2e-132 Identity = 230/326 (70.55%), Postives = 267/326 (81.90%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. TAIR 10
Match: AT1G31220.1 (Formyl transferase ) HSP 1 Score: 65.9 bits (159), Expect = 7.1e-11 Identity = 36/132 (27.27%), Postives = 67/132 (50.76%), Query Frame = 0
BLAST of Cp4.1LG08g07300 vs. TAIR 10
Match: AT1G66520.1 (formyltransferase, putative ) HSP 1 Score: 52.0 bits (123), Expect = 1.1e-06 Identity = 25/69 (36.23%), Postives = 38/69 (55.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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