Cp4.1LG08g07190 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g07190
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	50S ribosomal protein L19
Location	Cp4.1LG08: 5628104 .. 5631259 (-)
RNA-Seq Expression	Cp4.1LG08g07190
Synteny	Cp4.1LG08g07190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGACAACCCGGTCTGACCCGACCCAGTACCGACCCGCATCATTTGAACCCGAGAGATGGTGATGGTGGTATCACAGTGGATAAGGGATCAGCTTCAAATTCTTCTTGGATGAAGAACACAACAGACACACTCTTCCTGCCATGATTCTCTCCCTTCATCTCTAATTCTGTTCCATTTCTCCACTTCAGAAGTTCCAACTCCTTCATCAATGGCCTCCAAGATTCTCCCTCAGGTACACTTCCTCCTTTCGCCTTTTCCTTTCTCTCAATTCTCCCCTTCTCTACTTCATTTTCCTTCTCAATTTTCTTCTTGTTTCTAGGCCGTGTTTTCCATTCCGAGAACCCCCAACCAATGCGCGCCGAGGAAATTAGGGTTTTGTTCCGCAATTTATGGTAACCGGCTTTCGTTTTCTACTCTTTCCTCGAGTTCAATCGGCTGCCATTTTCACCATGCCGTTGCGGGGCCGGTGAAACGGACTTTTGTTGTGAGAGCTGAGGCAAATTCTGAAGCGGAAGCGGCGGAAGAAGCTCCCGAAGTTGAAGTAGAAGGAGTAGTGGAATCTGATGCTCAGCCTGAGGAGGTGAAACCGCCGAGAAAACCTCGAGTTAAGCTTGGGGATGTAATGGGGGTAATTGTTCTATCCATTCTTGCAACTGGAAGTGTAGTTTTGTTACTGGTTCTCTTGAATTCTGTGCTTTTTAGAAGCTCATTACAGTTCAGTTTAGTATAAGATTTCAGCTATCAATGGTGAAATTTTAGATTGCAGGTGACAGTCGAACATGTGATGGGATAGTTTGAATTTGGTTTTAGTTTTGTTCATTGTTTCTCTTCTGTAGATACTTAATAAGCGGGCAGTTGAGGCATCAGAGAAGGAAAGGCCGATTCCAGACATTAGAACTGGTGATATTGTGGAAATTAAACTGGTAAATCTCATTGTTAATCTTTATAATTTAAACTCTTGTGAAGATGTAAGGTTTATCTTAACTTTCTTTTGAATAAAAATGTTATTTCCACCACAGGAAGTTCCAGAAAATAGGCGTAGGCTTTCTGTTTATAGAGGAATTGTGATATCAAAACAAAATGCTGGCATCCACACAACGATTAGAATTCGAAGAATTATTGCTGGTGTAGGTGTGGAGATTGTATTTCCACTGTAAGTATTGAGTTCATGTTGATTTCTTTCTACAATCTAATATTTGAAGTCAATAGAATATGAATGTGCTTCATTTCATTCTAACTTGCTAATATAGTCATTATGCACTACACAAAATTTTGCTTCTCTATCTTTCTATTCCCATTTCTTTTAAATAGTTGTGTTGGAACTATCTGGATTTCGCCCAAGTCCATTGCTAGCATATATTGTCCTCTTTGGGCTTTTCCTTTCGAGATTCTCCTCAAGGTTTTTAAAATGCGTTTGCTAGGGAGAGGTTTCCTCCTCAAGGTTTTTAAAATGCGTTTGCTAGGGAGAGGTTTCCACACACTTATAAAAAATGTTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACAATCCACCCCGCTTCGCAGCCCAACGTTCTCGTTGGCACTCGTTCCTCTCTCCAATCGATGTGGGACCCCTCGATCCACCCCCTTTGGGGCCCTGCGTCCTCCCTCGCACACCGCCCGGTGTCCACCTCCATTCGGGGCTCAGCCTCCTCGCTAGCACATCGCCCGGTGCTGACTTTGATACCATTTGTAACAGCCCAAGCCCACCGCTAGCAGATATTGTTCTCTTTGGGCTTTCCCTGTTGGGCTTCCCCACGCGTTTTAAAACGCGTTTGCTGGGGAGAGATTTCCACACCCTTATAAAGAATGTTTTGTTTTCCTCCCCAACCGATGTGGGATCTCACAGTTTTGAGGTCTCATAGTTCTAAAACTTGACTTATTCCCAGAATCTTTTGTTCATTTTCAACATAAAATTGAGTGTGCTTTAGAACAATCTCACGTGCTGATTTAGTAATCAAGCAAGACTAGCTTTGGTTTGAATGACTTGAGGAAACTCAAACCTTGTTACATATGTTGCTCTCAAATTCCTGTTTCCATAATAGTAAAGCCCCCCCACCAAACAAACTAAAAATAGGAAGAAGAAGAAGAATCACCACATCCATCAAAGTTAGATGAAATCAGAACACCTGCCAAAGATTTGACAGCTCCCTCTTGGCTTGCTGAAAAGTGGGCTGTGGTTGTTCGCGTAACTTATGAAATGATAAACATCCAAAATTATATCCCGAGCAACTCAAAACTTGTGCTTGAAGCTCTCGTGGGTCGCTATGCAAAGAATATGACAGTTGGATGCCTGATTGATATATTATAACCTGCTTGATTACTTGTGTGTGATTGGATCTGCAAGTATGGATTTGAGCTCATGATGAACTTCTTCTGCAGGTACTCACCAAACATCAAAGAACTTAAAGTGGTAAGCCACAGGAAGGTGAGGAGGGCAAGGTTATATTATTTGAGAGACAAACTACCAAGACTCTCTACTTTCAAGTGAAACACCCCAATGGCATCTCCTTACACTTTTCCCTTCCCTGTTTTTTCATTGAACGTGGATGTGTTGTATGTTGTTATAATTCATTTTTGTGTATTGACGCTATTCCCCTCCTTCATTAACATTTAGTAGTCTAATGATATATGAGCAGCAGGGGTGTAATGAAAGATATTGTCTTGGATTCGCTAGCTCGCACCATGTTCCCAAGCTTCTTTGCCATGCTGATGCCATTATCTTGGCTTCTTCTCAGTTGTTATATCTCCTCTTGAACTCTAAATTTATGAAGATTCTGTGGGGCATCTCGAGTTCTTTCTGCTTTGTCACAAATTAGCAATGGCTCTACCCTATAAATCTTGGAAGACAGGAAGGTTTGGGCTTTGCATCCTTATGATGTCTTTGTTGGAGGTGGGAATCGGCTAATTTAGGGAATGATCATGTGAGGAATACTAACTCCATTGGTGTGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCACAAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTTTACTTCTAGACCCTCCCTTTTAGTTACTTTCTATGCTCGTAGTATATACTATCTGCATCTTTTGATGAATTATGGGAAAGTTATTTTTTTTATTTTTTT

mRNA sequence

TGGACAACCCGGTCTGACCCGACCCAGTACCGACCCGCATCATTTGAACCCGAGAGATGGTGATGGTGGTATCACAGTGGATAAGGGATCAGCTTCAAATTCTTCTTGGATGAAGAACACAACAGACACACTCTTCCTGCCATGATTCTCTCCCTTCATCTCTAATTCTGTTCCATTTCTCCACTTCAGAAGTTCCAACTCCTTCATCAATGGCCTCCAAGATTCTCCCTCAGGCCGTGTTTTCCATTCCGAGAACCCCCAACCAATGCGCGCCGAGGAAATTAGGGTTTTGTTCCGCAATTTATGGTAACCGGCTTTCGTTTTCTACTCTTTCCTCGAGTTCAATCGGCTGCCATTTTCACCATGCCGTTGCGGGGCCGGTGAAACGGACTTTTGTTGTGAGAGCTGAGGCAAATTCTGAAGCGGAAGCGGCGGAAGAAGCTCCCGAAGTTGAAGTAGAAGGAGTAGTGGAATCTGATGCTCAGCCTGAGGAGGTGAAACCGCCGAGAAAACCTCGAGTTAAGCTTGGGGATGTAATGGGGATACTTAATAAGCGGGCAGTTGAGGCATCAGAGAAGGAAAGGCCGATTCCAGACATTAGAACTGGTGATATTGTGGAAATTAAACTGGAAGTTCCAGAAAATAGGCGTAGGCTTTCTGTTTATAGAGGAATTGTGATATCAAAACAAAATGCTGGCATCCACACAACGATTAGAATTCGAAGAATTATTGCTGGTGTAGGTGTGGAGATTGTATTTCCACTGTACTCACCAAACATCAAAGAACTTAAAGTGGTAAGCCACAGGAAGGTGAGGAGGGCAAGGTTATATTATTTGAGAGACAAACTACCAAGACTCTCTACTTTCAAGTGAAACACCCCAATGGCATCTCCTTACACTTTTCCCTTCCCTGTTTTTTCATTGAACGTGGATGTGTTGTATGTTGTTATAATTCATTTTTGTGTATTGACGCTATTCCCCTCCTTCATTAACATTTAGTAGTCTAATGATATATGAGCAGCAGGGGTGTAATGAAAGATATTGTCTTGGATTCGCTAGCTCGCACCATGTTCCCAAGCTTCTTTGCCATGCTGATGCCATTATCTTGGCTTCTTCTCAGTTGTTATATCTCCTCTTGAACTCTAAATTTATGAAGATTCTGTGGGGCATCTCGAGTTCTTTCTGCTTTGTCACAAATTAGCAATGGCTCTACCCTATAAATCTTGGAAGACAGGAAGGTTTGGGCTTTGCATCCTTATGATGTCTTTGTTGGAGGTGGGAATCGGCTAATTTAGGGAATGATCATGTGAGGAATACTAACTCCATTGGTGTGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCACAAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTTTACTTCTAGACCCTCCCTTTTAGTTACTTTCTATGCTCGTAGTATATACTATCTGCATCTTTTGATGAATTATGGGAAAGTTATTTTTTTTATTTTTTT

Coding sequence (CDS)

ATGGCCTCCAAGATTCTCCCTCAGGCCGTGTTTTCCATTCCGAGAACCCCCAACCAATGCGCGCCGAGGAAATTAGGGTTTTGTTCCGCAATTTATGGTAACCGGCTTTCGTTTTCTACTCTTTCCTCGAGTTCAATCGGCTGCCATTTTCACCATGCCGTTGCGGGGCCGGTGAAACGGACTTTTGTTGTGAGAGCTGAGGCAAATTCTGAAGCGGAAGCGGCGGAAGAAGCTCCCGAAGTTGAAGTAGAAGGAGTAGTGGAATCTGATGCTCAGCCTGAGGAGGTGAAACCGCCGAGAAAACCTCGAGTTAAGCTTGGGGATGTAATGGGGATACTTAATAAGCGGGCAGTTGAGGCATCAGAGAAGGAAAGGCCGATTCCAGACATTAGAACTGGTGATATTGTGGAAATTAAACTGGAAGTTCCAGAAAATAGGCGTAGGCTTTCTGTTTATAGAGGAATTGTGATATCAAAACAAAATGCTGGCATCCACACAACGATTAGAATTCGAAGAATTATTGCTGGTGTAGGTGTGGAGATTGTATTTCCACTGTACTCACCAAACATCAAAGAACTTAAAGTGGTAAGCCACAGGAAGGTGAGGAGGGCAAGGTTATATTATTTGAGAGACAAACTACCAAGACTCTCTACTTTCAAGTGA

Protein sequence

MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKRTFVVRAEANSEAEAAEEAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK

Homology

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BLAST of Cp4.1LG08g07190 vs. ExPASy Swiss-Prot
Match: Q8W463 (50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g17560 PE=2 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.5e-67
Identity = 143/222 (64.41%), Postives = 174/222 (78.38%), Query Frame = 0


Query: 6   LPQAVFSIPRTPNQCAPRKLGF-----CSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 65
           LPQA+  IPR P Q + + LGF     C+    +R+S S LS +  G  F  ++   V+ 
Sbjct: 8   LPQALHMIPRNPTQ-SSKNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSLDTRVRN 67

Query: 66  TFVVRA-EANSEAEAAEEAPEV-EVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAV 125
            F+VRA E N+EAE+ E   E+ + EG VE   +  E KP RKPR+KLGDVMGILN++A+
Sbjct: 68  EFIVRAEEGNTEAESEEFVAEIADTEGNVE---EVVEAKPTRKPRIKLGDVMGILNQKAI 127

Query: 126 EASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVG 185
           E +EK RP+P+IRTGDIVEIKLEVPEN+RRLS+Y+GIV+S+QNAGIHTTIRIRRIIAG+G
Sbjct: 128 EVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIG 187

Query: 186 VEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 221
           VEIVFP+YSPNIKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 188 VEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 225

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BLAST of Cp4.1LG08g07190 vs. ExPASy Swiss-Prot
Match: P82413 (50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 PE=1 SV=2)

HSP 1 Score: 251.5 bits (641), Expect = 8.6e-66
Identity = 146/234 (62.39%), Postives = 178/234 (76.07%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPN-QCAP--RKLGF---------CSAIYGNRLSFSTLSSSSIGC 60
           MASK+LPQA+  IP   + QC P  ++LGF          S+   + L  S  SS+    
Sbjct: 1   MASKVLPQALLVIPSNHSLQCPPLKKQLGFPIDSNRRFSLSSNCRSNLMVSRASSNLFSS 60

Query: 61  HFHHAVAGPVKRTFVVRAEANSEAEAAEEAPEV--EVEGVVESDAQPEEVKPPRKPRVKL 120
           +F    + P + +FVVR+EA   ++A  E+  V  E E  VES+A+ EE +PPR+ RVKL
Sbjct: 61  NFSSIFSFPARNSFVVRSEAEDSSDAPAESVAVVAEEELPVESEAEAEE-RPPRQQRVKL 120

Query: 121 GDVMGILNKRAVEASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHT 180
           GD+MGILNK+AV A+E+ RP+P IRTGDIV+I+LEVPEN+RRLSVY+GIVIS+QNAGIHT
Sbjct: 121 GDIMGILNKKAVHAAEELRPVPGIRTGDIVQIRLEVPENKRRLSVYKGIVISRQNAGIHT 180

Query: 181 TIRIRRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 221
           TIRIRRIIAGVGVEIVFPLYSPNIKE+KVVSHRKVR+ARLYYLRDKLPRLSTFK
Sbjct: 181 TIRIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRKARLYYLRDKLPRLSTFK 233

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BLAST of Cp4.1LG08g07190 vs. ExPASy Swiss-Prot
Match: Q8RXX5 (50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g47190 PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.5e-65
Identity = 136/227 (59.91%), Postives = 170/227 (74.89%), Query Frame = 0


Query: 2   ASKILPQAVFSIPRTPNQCAPRKLGFCSAI-----YGNRLSFSTLSSSSIGCHFHHAVAG 61
           +S +LPQA+  IPRTP+  + + LG  S +       +RLS S +  +    +F  A+  
Sbjct: 4   SSHLLPQALHMIPRTPS-FSSKNLGVSSILPRASSVNSRLSVSRVFLNHSSSNFGFAIDS 63

Query: 62  PVKRTFVVRAEANSEAE---AAEEAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVMGIL 121
             ++ F+ +AE ++E E     E A E E EG  E+    EE KPP K RVKLGD+MG+L
Sbjct: 64  KKRKEFIAKAEESTEGETEAVVENAVETEAEGEGEATVAAEEAKPPWKTRVKLGDIMGLL 123

Query: 122 NKRAVEASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRI 181
           NK+A+E +E  RP+P +RTGDIVEIKLEVPEN+RRLS+Y+GIV+S+QNAGIHTTIRIRRI
Sbjct: 124 NKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRI 183

Query: 182 IAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 221
           IAG+GVEIVFP+YSPNIKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 184 IAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 229

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BLAST of Cp4.1LG08g07190 vs. ExPASy Swiss-Prot
Match: B8HT34 (50S ribosomal protein L19 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=rplS PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.4e-20
Identity = 48/106 (45.28%), Postives = 75/106 (70.75%), Query Frame = 0


Query: 116 RAVEASEKERPIPDIRTGDIVEIKLEVPE-NRRRLSVYRGIVISKQNAGIHTTIRIRRII 175
           R++EA + +  +P+I  GD V++ + + E N+ R   Y GIVI+K+N+GI+ TI +RRI 
Sbjct: 8   RSLEAEQLKSNLPEIHVGDTVKVGVIIQEGNKERTQPYEGIVIAKRNSGINATITVRRIF 67

Query: 176 AGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 221
            GVGVE VF L+SP ++ +K++   KVRRA+LYYLRD++ + +  K
Sbjct: 68  QGVGVERVFLLHSPRVESIKIIKRGKVRRAKLYYLRDRVGKATRVK 113

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BLAST of Cp4.1LG08g07190 vs. ExPASy Swiss-Prot
Match: B2JA71 (50S ribosomal protein L19 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=rplS PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.6e-19
Identity = 47/106 (44.34%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 116 RAVEASEKERPIPDIRTGDIVEIKLEVPENRR-RLSVYRGIVISKQNAGIHTTIRIRRII 175
           R++EA + +  +PDI  GD V++ +++ E  + R+  Y G+VI+K+N GI+ TI +R++ 
Sbjct: 8   RSIEAEQLKSNLPDIYVGDTVKVGVKIKEGEKYRVQPYEGVVIAKRNGGINETITVRKVF 67

Query: 176 AGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 221
            GVGVE VF L+SP I  +KV+   KVRRA+LYYLRD++ + +  K
Sbjct: 68  QGVGVERVFLLHSPRIDSIKVLRRGKVRRAKLYYLRDRVGKATRIK 113

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BLAST of Cp4.1LG08g07190 vs. NCBI nr
Match: XP_023541012.1 (50S ribosomal protein L19-1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 421 bits (1082), Expect = 3.50e-148
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60
           MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  TFVVRAEANSEAEAAEEAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120
           TFVVRAEANSEAEAAEEAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEANSEAEAAEEAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220
           IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220

[Close]

BLAST of Cp4.1LG08g07190 vs. NCBI nr
Match: XP_022938903.1 (50S ribosomal protein L19-1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 419 bits (1077), Expect = 2.02e-147
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60
           MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  TFVVRAEANSEAEAAEEAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120
           TFVVRAEANSEAEAAEEAPE EVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPD+RTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220
           IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220

[Close]

BLAST of Cp4.1LG08g07190 vs. NCBI nr
Match: KAG7030158.1 (50S ribosomal protein L19, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 414 bits (1064), Expect = 1.94e-145
Identity = 216/220 (98.18%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60
           MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVA PVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 60

Query: 61  TFVVRAEANSEAEAAEEAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120
           TFVVRAEANSE EAAEEAPE EVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEANSETEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPD+RTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220
           IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220

[Close]

BLAST of Cp4.1LG08g07190 vs. NCBI nr
Match: XP_023005538.1 (50S ribosomal protein L19-1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 413 bits (1061), Expect = 5.56e-145
Identity = 216/220 (98.18%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60
           MASKILPQAVFSIPRTPNQCAPRKLGF SAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFRSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  TFVVRAEANSEAEAAEEAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120
           TFVVRAE NSEAEAAEEAPE EVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEVNSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPD+RTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220
           IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220

[Close]

BLAST of Cp4.1LG08g07190 vs. NCBI nr
Match: KAG6596883.1 (50S ribosomal protein L19, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 383 bits (983), Expect = 7.08e-133
Identity = 200/203 (98.52%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60
           MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVA PVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 60

Query: 61  TFVVRAEANSEAEAAEEAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120
           TFVVRAEANSEAEAAEEAPE EVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPD+RTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKELKVVSHRKVRR 203
           IVFPLYSPNIKELKVVSHRKVRR
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRR 203

[Close]

BLAST of Cp4.1LG08g07190 vs. ExPASy TrEMBL
Match: A0A6J1FK79 (50S ribosomal protein L19-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111444973 PE=3 SV=1)

HSP 1 Score: 419 bits (1077), Expect = 9.79e-148
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60
           MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  TFVVRAEANSEAEAAEEAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120
           TFVVRAEANSEAEAAEEAPE EVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPD+RTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220
           IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220

[Close]

BLAST of Cp4.1LG08g07190 vs. ExPASy TrEMBL
Match: A0A6J1L2G3 (50S ribosomal protein L19-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111498498 PE=3 SV=1)

HSP 1 Score: 413 bits (1061), Expect = 2.69e-145
Identity = 216/220 (98.18%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60
           MASKILPQAVFSIPRTPNQCAPRKLGF SAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFRSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  TFVVRAEANSEAEAAEEAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120
           TFVVRAE NSEAEAAEEAPE EVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEVNSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPD+RTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220
           IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220

[Close]

BLAST of Cp4.1LG08g07190 vs. ExPASy TrEMBL
Match: A0A0A0L237 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017220 PE=3 SV=1)

HSP 1 Score: 369 bits (948), Expect = 4.65e-128
Identity = 193/221 (87.33%), Postives = 205/221 (92.76%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60
           MASKILPQAV SIPR PNQCAPR+LGFCSA+ G R+SFSTLSSSSIG HFHH VA P++R
Sbjct: 1   MASKILPQAVISIPRNPNQCAPRRLGFCSAVSGTRVSFSTLSSSSIGSHFHHTVAAPLRR 60

Query: 61  TFVVRAEANSEAE-AAEEAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVE 120
            FVVRAEAN EA+ AAEEAPE EVE  VESDAQPEE KP RKPRVKLGDVMGILNKRA+E
Sbjct: 61  AFVVRAEANPEADSAAEEAPEAEVEAAVESDAQPEEEKPSRKPRVKLGDVMGILNKRAIE 120

Query: 121 ASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180
           ASEKERPIPDIRTGDIVE+KLEV ENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV
Sbjct: 121 ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180

Query: 181 EIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220
           EIVFPLYSPNI+E++VVSHRKVRRARLYYLRDKLP+LSTFK
Sbjct: 181 EIVFPLYSPNIREIRVVSHRKVRRARLYYLRDKLPKLSTFK 221

[Close]

BLAST of Cp4.1LG08g07190 vs. ExPASy TrEMBL
Match: A0A1S3BJX1 (50S ribosomal protein L19, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490850 PE=3 SV=1)

HSP 1 Score: 367 bits (941), Expect = 5.42e-127
Identity = 193/221 (87.33%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60
           MASKILPQAV SIPR PNQC PR+LGFCSA+ G R+SFSTLSSSSIG HF H V+ P+KR
Sbjct: 1   MASKILPQAVISIPRNPNQCPPRRLGFCSAVSGTRVSFSTLSSSSIGSHFRHTVSAPLKR 60

Query: 61  TFVVRAEANSEAE-AAEEAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVE 120
            FVVRAEAN EAE AAEEAPE EVE  VESDAQPEE KP RKPRVKLGDVMGILNKRA+E
Sbjct: 61  AFVVRAEANPEAESAAEEAPEAEVEAAVESDAQPEEEKPSRKPRVKLGDVMGILNKRAIE 120

Query: 121 ASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180
           ASEKERPIPDIRTGDIVE+KLEV ENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV
Sbjct: 121 ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180

Query: 181 EIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220
           EIVFPLYSPNI+E+KVVSHRKVRRARLYYLRDKLP+LSTFK
Sbjct: 181 EIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 221

[Close]

BLAST of Cp4.1LG08g07190 vs. ExPASy TrEMBL
Match: A0A6J1HJM2 (50S ribosomal protein L19-1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111465106 PE=3 SV=1)

HSP 1 Score: 360 bits (925), Expect = 2.04e-124
Identity = 190/230 (82.61%), Postives = 203/230 (88.26%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60
           MA+KILPQAV S+PRTPNQCAPR+LGFCSAI   RLSFSTLSSSSIGCHFHH V+ P+KR
Sbjct: 1   MATKILPQAVISVPRTPNQCAPRRLGFCSAISATRLSFSTLSSSSIGCHFHHTVSAPMKR 60

Query: 61  TFVVRAEANSEAEAAE----------EAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVM 120
            FVVRAEA+SEAE+A           EAP+  VE V ESD QPE  KPPRKPRVKLGDV+
Sbjct: 61  AFVVRAEADSEAESASDEENVDKTVGEAPQGVVEAVAESDGQPEAEKPPRKPRVKLGDVL 120

Query: 121 GILNKRAVEASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRI 180
           GILNKRAVEASEK RPIPDIRTGDIVE+KLEVPENRRRLSVYRGIV+SKQNAGIHTTIRI
Sbjct: 121 GILNKRAVEASEKARPIPDIRTGDIVEVKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI 180

Query: 181 RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220
           R+IIAGVGVEIVFPLYSPNIK +KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 RKIIAGVGVEIVFPLYSPNIKGIKVVSHRKVRRARLYYLRDKLPRLSTFK 230

[Close]

BLAST of Cp4.1LG08g07190 vs. TAIR 10
Match: AT4G17560.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 256.1 bits (653), Expect = 2.5e-68
Identity = 143/222 (64.41%), Postives = 174/222 (78.38%), Query Frame = 0


Query: 6   LPQAVFSIPRTPNQCAPRKLGF-----CSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 65
           LPQA+  IPR P Q + + LGF     C+    +R+S S LS +  G  F  ++   V+ 
Sbjct: 8   LPQALHMIPRNPTQ-SSKNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSLDTRVRN 67

Query: 66  TFVVRA-EANSEAEAAEEAPEV-EVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAV 125
            F+VRA E N+EAE+ E   E+ + EG VE   +  E KP RKPR+KLGDVMGILN++A+
Sbjct: 68  EFIVRAEEGNTEAESEEFVAEIADTEGNVE---EVVEAKPTRKPRIKLGDVMGILNQKAI 127

Query: 126 EASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVG 185
           E +EK RP+P+IRTGDIVEIKLEVPEN+RRLS+Y+GIV+S+QNAGIHTTIRIRRIIAG+G
Sbjct: 128 EVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIG 187

Query: 186 VEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 221
           VEIVFP+YSPNIKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 188 VEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 225

[Close]

BLAST of Cp4.1LG08g07190 vs. TAIR 10
Match: AT5G47190.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 250.0 bits (637), Expect = 1.8e-66
Identity = 136/227 (59.91%), Postives = 170/227 (74.89%), Query Frame = 0


Query: 2   ASKILPQAVFSIPRTPNQCAPRKLGFCSAI-----YGNRLSFSTLSSSSIGCHFHHAVAG 61
           +S +LPQA+  IPRTP+  + + LG  S +       +RLS S +  +    +F  A+  
Sbjct: 4   SSHLLPQALHMIPRTPS-FSSKNLGVSSILPRASSVNSRLSVSRVFLNHSSSNFGFAIDS 63

Query: 62  PVKRTFVVRAEANSEAE---AAEEAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVMGIL 121
             ++ F+ +AE ++E E     E A E E EG  E+    EE KPP K RVKLGD+MG+L
Sbjct: 64  KKRKEFIAKAEESTEGETEAVVENAVETEAEGEGEATVAAEEAKPPWKTRVKLGDIMGLL 123

Query: 122 NKRAVEASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRI 181
           NK+A+E +E  RP+P +RTGDIVEIKLEVPEN+RRLS+Y+GIV+S+QNAGIHTTIRIRRI
Sbjct: 124 NKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRI 183

Query: 182 IAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 221
           IAG+GVEIVFP+YSPNIKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 184 IAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 229

[Close]

BLAST of Cp4.1LG08g07190 vs. TAIR 10
Match: AT5G11750.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 134.8 bits (338), Expect = 8.4e-32
Identity = 70/134 (52.24%), Postives = 102/134 (76.12%), Query Frame = 0


Query: 84  EGVVESD-AQPEEVKPPRKPRVKLGDVMGILNKRAVEASEKERPIPDIRTGDIVEIKLEV 143
           +G  ESD   P+ +K  R  +     +M I++K AVE     R IP+I+ G IV++K+EV
Sbjct: 94  QGSPESDCVVPQRIKFKRLDKT-AKHIMQIVDKEAVEEVRNLREIPEIKPGYIVQLKVEV 153

Query: 144 PENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKELKVVSHRKVR 203
           PEN+RR+S+ +G+VI+++NAG+++T RIRR++AGVGVE +FPLYSPN++E+KVV  +KVR
Sbjct: 154 PENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKVVDKKKVR 213

Query: 204 RARLYYLRDKLPRL 217
           RA+LYYLRDK+  L
Sbjct: 214 RAKLYYLRDKVNAL 226

[Close]

BLAST of Cp4.1LG08g07190 vs. TAIR 10
Match: AT4G11630.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 134.0 bits (336), Expect = 1.4e-31
Identity = 82/217 (37.79%), Postives = 130/217 (59.91%), Query Frame = 0


Query: 2   ASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGP-VKR 61
           ++++L +  FSI  T    +    G  S     +L F +  SS    +   ++       
Sbjct: 7   STRLLQRHRFSISNTLRFTSSSSCGSWSENESRKLGFDSCPSSRAATYLISSLKNAGFSS 66

Query: 62  TFVVRAEANSEAEAAEEAPEVEVEGVVESD-AQPEEVKPPRKPRVKLGDVMGILNKRAVE 121
           + + +      +       +  V+G  ESD   P+ +K  R  +     +M I++K AVE
Sbjct: 67  SAIPKQNFTYASRCFSTTGDSSVQGSPESDCVVPQRIKFKRLDKT-AKHIMQIVDKEAVE 126

Query: 122 ASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 181
                R IP+I+ G IV++K+EVPEN+RR+S+ +G+VI+++NAG+++T RIRR++AGVGV
Sbjct: 127 EVRSLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGV 186

Query: 182 EIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRL 217
           E +FPLYSPN++E+KVV  +KVRRA+LYYLRDK+  L
Sbjct: 187 ESMFPLYSPNLREIKVVDKKKVRRAKLYYLRDKVNAL 222

[Close]

BLAST of Cp4.1LG08g07190 vs. TAIR 10
Match: AT1G24240.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 129.8 bits (325), Expect = 2.7e-30
Identity = 84/220 (38.18%), Postives = 133/220 (60.45%), Query Frame = 0


Query: 2   ASKILPQAVFSI----PRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGP 61
           ++++L +  FSI    P T + C     G  SA    +L F +  S+    +   ++   
Sbjct: 7   STRLLQRHRFSISNTLPFTSSSC-----GSWSANESRKLGFDSFPSTRAATYLISSLKNA 66

Query: 62  VKRTFVVRAEANSEAEAAEEAPEVEVEGVVESD-AQPEEVKPPRKPRVKLGDVMGILNKR 121
              +  V  + N  +       +  V+G  ESD   P+ +K  R  +     +M I++K 
Sbjct: 67  GFSSLAVVPKQNFSSRCFSTTGD-SVQGSPESDCVVPQRIKFKRLDKT-AKHIMQIVDKE 126

Query: 122 AVEASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAG 181
           AVE     R IP+I+ G IV++K+EVPEN+RR+S+ +G+VI+++NAG+++T RIRR++AG
Sbjct: 127 AVEEVRTLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAG 186

Query: 182 VGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRL 217
           VGVE +FPLYSPN++ +KVV  +KVRRA+LYYLR+K+  L
Sbjct: 187 VGVESMFPLYSPNLRVIKVVDKKKVRRAKLYYLREKVNAL 219

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g07190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W463	3.5e-67	64.41	50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
P82413	8.6e-66	62.39	50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 P...	[more]
Q8RXX5	2.5e-65	59.91	50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
B8HT34	9.4e-20	45.28	50S ribosomal protein L19 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=39...	[more]
B2JA71	3.6e-19	44.34	50S ribosomal protein L19 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) ...	[more]

BLAST of Cp4.1LG08g07190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541012.1	3.50e-148	100.00	50S ribosomal protein L19-1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022938903.1	2.02e-147	99.09	50S ribosomal protein L19-1, chloroplastic [Cucurbita moschata]	[more]
KAG7030158.1	1.94e-145	98.18	50S ribosomal protein L19, chloroplastic [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_023005538.1	5.56e-145	98.18	50S ribosomal protein L19-1, chloroplastic [Cucurbita maxima]	[more]
KAG6596883.1	7.08e-133	98.52	50S ribosomal protein L19, chloroplastic, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Cp4.1LG08g07190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FK79	9.79e-148	99.09	50S ribosomal protein L19-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1L2G3	2.69e-145	98.18	50S ribosomal protein L19-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0L237	4.65e-128	87.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017220 PE=3 SV=1	[more]
A0A1S3BJX1	5.42e-127	87.33	50S ribosomal protein L19, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490850...	[more]
A0A6J1HJM2	2.04e-124	82.61	50S ribosomal protein L19-1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Cp4.1LG08g07190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17560.1	2.5e-68	64.41	Ribosomal protein L19 family protein	[more]
AT5G47190.1	1.8e-66	59.91	Ribosomal protein L19 family protein	[more]
AT5G11750.1	8.4e-32	52.24	Ribosomal protein L19 family protein	[more]
AT4G11630.1	1.4e-31	37.79	Ribosomal protein L19 family protein	[more]
AT1G24240.1	2.7e-30	38.18	Ribosomal protein L19 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001857	Ribosomal protein L19	PRINTS	PR00061	RIBOSOMALL19	coord: 173..196 score: 43.06 coord: 114..143 score: 22.36
IPR001857	Ribosomal protein L19	PFAM	PF01245	Ribosomal_L19	coord: 117..214 e-value: 1.3E-31 score: 108.8
IPR001857	Ribosomal protein L19	TIGRFAM	TIGR01024	TIGR01024	coord: 118..212 e-value: 1.7E-28 score: 97.0
IPR001857	Ribosomal protein L19	PANTHER	PTHR15680	RIBOSOMAL PROTEIN L19	coord: 1..220
IPR038657	Ribosomal protein L19 superfamily	GENE3D	2.30.30.790		coord: 102..219 e-value: 5.5E-31 score: 109.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..101
None	No IPR available	PANTHER	PTHR15680:SF10	50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED	coord: 1..220
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 117..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g07190.1	Cp4.1LG08g07190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome