Cp4.1LG08g07120 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG08g07120
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG08: 5570097 .. 5571701 (-)
RNA-Seq ExpressionCp4.1LG08g07120
SyntenyCp4.1LG08g07120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAAAGGTCTCAAGAGAGAACAAAGTGTTGGTGAGTGTGTATACAGAGAGGCAGGAACCAAGAGTAGCAGTAAATCGTGTCCAACGTGATGATGTGAACAAAACAGTGAGGAATCAGTGGAAGAAAGAAATAGCTAATAAAGGATACAATAGGAGAACTGAACTCCTTAAGTACTCTCAACGCCTGCGAAAATCTGCACAATCACCTGCATCTCCATATCTTCCAACTCCGGAGCTGATTTCTGTGACGAACAAGCAACCGATCCAAAGAAACGTAGCGATTAATCCTGTATGTATGCTCTTCCGTTTCTGTAAGTTCATTATTTTTAGAACTCAAGAATTCCCGTTCAAGCAACCTAGTGGCATATTGTAGGAACAACGATCCTCTACAGTGGCATGATACTGTCCACTTTGAATATAAGCTCTCATGTTTTTTCAAAAGACCTCAAACCAATGAAGATAATATCCCTTACTTATATACCATGATATTTCCCTTTATTAGCTAATGTGAGACTCGAACAATCTTAACAATTCCTAATAATCCTCACCACGAACAAAGTACACCATTGAGCCTCACATGCCGACTCCTTTTTCTTTGGAGCCCTCGAACAAAGTACAACATTGAGTCTCCCCTTGAACAGTTATCTATTTGTCCAACACTATTCTAGACGACTTCTCTTCACTAGAGCACATTCTTAGTTCAATAAAACTCTACCATGAATCTTCACCATGACTGCACTTTCGAGACTCGCAACTTCTTTGTTTGACACCTGAGTCACTACGACTACACCTTCAAGATTCAGAGCTTCTTTGTTCAACATTTGAGGATTCTAGTGACATAACTAAGTTAAGGTATGACTCTGATACCACTTGTAGGAACAACTACCCTCCACAATGGCATAATATTGTTCACTTTGAGCATAAACTCCCGTGATTTTGTTTTTGGTTTCCCTAAAAGGTCCCATACAAATAGAGATAGTGTCGCTTAATTATATATCCATGATCTTCCCCTTAATTAGCCAATGCGAAACTCCAACAATCCTCAACACACAACAATAATCTAACCCACCGAGTGAGAAAGTATGATAATCAATTTAGTTTTCTTCAACAATAATGTAACCCAACTGTACACCAAATTCATCTGAACAACTCAAATTTGAATAGACATATTGCAGTAATATTTGTTCAAGTGGTCAAGTTTTGGATGTGTAAGTATCTCCATGGTCATTCGACCATAATTTTAAGTTAGAAACATGATTACCAGTGTTGTGTAATACTGTAGATGAGGAGATGATGTCAAACCCAATCATTTCTCTTCTATATATAACTTGTTTTGGAAGGATATAGCCTGGTATCTATATCATGTTTGTGACGAAGAATTAAAGTTTTCCTTTTTTGATAGCTCGTCAATCTTCGTGCAAAGCCCAAGGGTGCCAGATTTACCTCTTGCTTCGGCAACCTGATTCAAAGGTCTTACAAGGCTTTGACGAGTTTTCAACCAAAAAACAAGAGACAAAATCAGAACCAAAGCAGCGGATCTACCAAGAATGCTAATGAGAATAAAAGAATTAGAAGGATAAGACTATTGAAATTTACATGCACTTAG

mRNA sequence

GCAAAGGTCTCAAGAGAGAACAAAGTGTTGGTGAGTGTGTATACAGAGAGGCAGGAACCAAGAGTAGCAGTAAATCGTGTCCAACGTGATGATGTGAACAAAACAGTGAGGAATCAGTGGAAGAAAGAAATAGCTAATAAAGGATACAATAGGAGAACTGAACTCCTTAAGTACTCTCAACGCCTGCGAAAATCTGCACAATCACCTGCATCTCCATATCTTCCAACTCCGGAGCTGATTTCTGTGACGAACAAGCAACCGATCCAAAGAAACGTAGCGATTAATCCTCTCGTCAATCTTCGTGCAAAGCCCAAGGGTGCCAGATTTACCTCTTGCTTCGGCAACCTGATTCAAAGGTCTTACAAGGCTTTGACGAGTTTTCAACCAAAAAACAAGAGACAAAATCAGAACCAAAGCAGCGGATCTACCAAGAATGCTAATGAGAATAAAAGAATTAGAAGGATAAGACTATTGAAATTTACATGCACTTAG

Coding sequence (CDS)

GCAAAGGTCTCAAGAGAGAACAAAGTGTTGGTGAGTGTGTATACAGAGAGGCAGGAACCAAGAGTAGCAGTAAATCGTGTCCAACGTGATGATGTGAACAAAACAGTGAGGAATCAGTGGAAGAAAGAAATAGCTAATAAAGGATACAATAGGAGAACTGAACTCCTTAAGTACTCTCAACGCCTGCGAAAATCTGCACAATCACCTGCATCTCCATATCTTCCAACTCCGGAGCTGATTTCTGTGACGAACAAGCAACCGATCCAAAGAAACGTAGCGATTAATCCTCTCGTCAATCTTCGTGCAAAGCCCAAGGGTGCCAGATTTACCTCTTGCTTCGGCAACCTGATTCAAAGGTCTTACAAGGCTTTGACGAGTTTTCAACCAAAAAACAAGAGACAAAATCAGAACCAAAGCAGCGGATCTACCAAGAATGCTAATGAGAATAAAAGAATTAGAAGGATAAGACTATTGAAATTTACATGCACTTAG

Protein sequence

AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQRLRKSAQSPASPYLPTPELISVTNKQPIQRNVAINPLVNLRAKPKGARFTSCFGNLIQRSYKALTSFQPKNKRQNQNQSSGSTKNANENKRIRRIRLLKFTCT
Homology
BLAST of Cp4.1LG08g07120 vs. NCBI nr
Match: KAG7030163.1 (hypothetical protein SDJN02_08510, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261 bits (668), Expect = 4.14e-87
Identity = 145/163 (88.96%), Postives = 146/163 (89.57%), Query Frame = 0

Query: 1   AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ 60
           AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ
Sbjct: 5   AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ 64

Query: 61  RLRKSAQSPASPYLPTPELISVTNKQPIQRNVAINPLVNLRAKPKGARFTSCFGNLIQRS 120
           RLRKSAQSPASPYLPTPE IS               LVNLRAKPKGARFTSCFGNLIQRS
Sbjct: 65  RLRKSAQSPASPYLPTPEPIS---------------LVNLRAKPKGARFTSCFGNLIQRS 124

Query: 121 YKALTSFQPKNKRQNQNQSSGSTKNANENKRIRRIRLLKFTCT 163
            KALTSFQPKNKRQNQNQSSGSTKNAN+NKRIRRIRLLKFTCT
Sbjct: 125 RKALTSFQPKNKRQNQNQSSGSTKNANDNKRIRRIRLLKFTCT 152

BLAST of Cp4.1LG08g07120 vs. NCBI nr
Match: XP_011650375.1 (uncharacterized protein LOC105434777 isoform X2 [Cucumis sativus] >KAE8650041.1 hypothetical protein Csa_011805 [Cucumis sativus])

HSP 1 Score: 226 bits (577), Expect = 6.95e-73
Identity = 126/176 (71.59%), Postives = 139/176 (78.98%), Query Frame = 0

Query: 1   AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ 60
           A VS+ENKVLV+VY+E+QEPR+ VNR QRD+VNK VRNQWK++ ANKGYNRRTELLKYSQ
Sbjct: 2   ATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQ 61

Query: 61  RLRKSAQSPASPYLPTPELISVTNKQPIQRNVAINPLVNLRAKPKGARFTSCFGNLIQRS 120
           RLRKSA+SPASPY+ TPE I + NKQPI R++AIN LVNL  KPKG RFTSCFGNLIQRS
Sbjct: 62  RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLLVNLCGKPKGPRFTSCFGNLIQRS 121

Query: 121 YKALTSFQPKNKRQNQNQSSGSTKNANENKRIR-------------RIRLLKFTCT 163
           YKALTSFQPK  RQ QNQSSGSTK  NE K                RIRLL FTCT
Sbjct: 122 YKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT 177

BLAST of Cp4.1LG08g07120 vs. NCBI nr
Match: XP_008448776.1 (PREDICTED: uncharacterized protein LOC103490841 isoform X2 [Cucumis melo])

HSP 1 Score: 226 bits (575), Expect = 1.40e-72
Identity = 126/176 (71.59%), Postives = 139/176 (78.98%), Query Frame = 0

Query: 1   AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ 60
           A VS+ENKVLV+VY+E+QEPR+ VNR QR +VNK VRNQWK++ ANKGYNRRTELLKYSQ
Sbjct: 2   ATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYSQ 61

Query: 61  RLRKSAQSPASPYLPTPELISVTNKQPIQRNVAINPLVNLRAKPKGARFTSCFGNLIQRS 120
           RLRKSA+SPASPY+ TPE I + NKQPI R++AIN LVNL  KPKG RFTSCFGNLIQRS
Sbjct: 62  RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLLVNLCGKPKGPRFTSCFGNLIQRS 121

Query: 121 YKALTSFQPKNKRQNQNQSSGSTKNANENKRI-------------RRIRLLKFTCT 163
           YKAL SFQPK  RQ QNQSSGSTKN NE K               RRIRLL FTCT
Sbjct: 122 YKALASFQPKKDRQKQNQSSGSTKNVNEVKNSESKSKNTIDKVKGRRIRLLTFTCT 177

BLAST of Cp4.1LG08g07120 vs. NCBI nr
Match: XP_011650374.1 (uncharacterized protein LOC105434777 isoform X1 [Cucumis sativus])

HSP 1 Score: 221 bits (562), Expect = 1.62e-70
Identity = 126/182 (69.23%), Postives = 139/182 (76.37%), Query Frame = 0

Query: 1   AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ 60
           A VS+ENKVLV+VY+E+QEPR+ VNR QRD+VNK VRNQWK++ ANKGYNRRTELLKYSQ
Sbjct: 2   ATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQ 61

Query: 61  RLRKSAQSPASPYLPTPELISVTNKQPIQRNVAIN------PLVNLRAKPKGARFTSCFG 120
           RLRKSA+SPASPY+ TPE I + NKQPI R++AIN       LVNL  KPKG RFTSCFG
Sbjct: 62  RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSFSLVNLCGKPKGPRFTSCFG 121

Query: 121 NLIQRSYKALTSFQPKNKRQNQNQSSGSTKNANENKRIR-------------RIRLLKFT 163
           NLIQRSYKALTSFQPK  RQ QNQSSGSTK  NE K                RIRLL FT
Sbjct: 122 NLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFT 181

BLAST of Cp4.1LG08g07120 vs. NCBI nr
Match: XP_008448775.1 (PREDICTED: uncharacterized protein LOC103490841 isoform X1 [Cucumis melo])

HSP 1 Score: 220 bits (560), Expect = 3.27e-70
Identity = 126/182 (69.23%), Postives = 139/182 (76.37%), Query Frame = 0

Query: 1   AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ 60
           A VS+ENKVLV+VY+E+QEPR+ VNR QR +VNK VRNQWK++ ANKGYNRRTELLKYSQ
Sbjct: 2   ATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYSQ 61

Query: 61  RLRKSAQSPASPYLPTPELISVTNKQPIQRNVAIN------PLVNLRAKPKGARFTSCFG 120
           RLRKSA+SPASPY+ TPE I + NKQPI R++AIN       LVNL  KPKG RFTSCFG
Sbjct: 62  RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSFSLVNLCGKPKGPRFTSCFG 121

Query: 121 NLIQRSYKALTSFQPKNKRQNQNQSSGSTKNANENKRI-------------RRIRLLKFT 163
           NLIQRSYKAL SFQPK  RQ QNQSSGSTKN NE K               RRIRLL FT
Sbjct: 122 NLIQRSYKALASFQPKKDRQKQNQSSGSTKNVNEVKNSESKSKNTIDKVKGRRIRLLTFT 181

BLAST of Cp4.1LG08g07120 vs. ExPASy TrEMBL
Match: A0A1S3BL45 (uncharacterized protein LOC103490841 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490841 PE=4 SV=1)

HSP 1 Score: 226 bits (575), Expect = 6.78e-73
Identity = 126/176 (71.59%), Postives = 139/176 (78.98%), Query Frame = 0

Query: 1   AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ 60
           A VS+ENKVLV+VY+E+QEPR+ VNR QR +VNK VRNQWK++ ANKGYNRRTELLKYSQ
Sbjct: 2   ATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYSQ 61

Query: 61  RLRKSAQSPASPYLPTPELISVTNKQPIQRNVAINPLVNLRAKPKGARFTSCFGNLIQRS 120
           RLRKSA+SPASPY+ TPE I + NKQPI R++AIN LVNL  KPKG RFTSCFGNLIQRS
Sbjct: 62  RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLLVNLCGKPKGPRFTSCFGNLIQRS 121

Query: 121 YKALTSFQPKNKRQNQNQSSGSTKNANENKRI-------------RRIRLLKFTCT 163
           YKAL SFQPK  RQ QNQSSGSTKN NE K               RRIRLL FTCT
Sbjct: 122 YKALASFQPKKDRQKQNQSSGSTKNVNEVKNSESKSKNTIDKVKGRRIRLLTFTCT 177

BLAST of Cp4.1LG08g07120 vs. ExPASy TrEMBL
Match: A0A1S3BKH3 (uncharacterized protein LOC103490841 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490841 PE=4 SV=1)

HSP 1 Score: 220 bits (560), Expect = 1.58e-70
Identity = 126/182 (69.23%), Postives = 139/182 (76.37%), Query Frame = 0

Query: 1   AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ 60
           A VS+ENKVLV+VY+E+QEPR+ VNR QR +VNK VRNQWK++ ANKGYNRRTELLKYSQ
Sbjct: 2   ATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYSQ 61

Query: 61  RLRKSAQSPASPYLPTPELISVTNKQPIQRNVAIN------PLVNLRAKPKGARFTSCFG 120
           RLRKSA+SPASPY+ TPE I + NKQPI R++AIN       LVNL  KPKG RFTSCFG
Sbjct: 62  RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSFSLVNLCGKPKGPRFTSCFG 121

Query: 121 NLIQRSYKALTSFQPKNKRQNQNQSSGSTKNANENKRI-------------RRIRLLKFT 163
           NLIQRSYKAL SFQPK  RQ QNQSSGSTKN NE K               RRIRLL FT
Sbjct: 122 NLIQRSYKALASFQPKKDRQKQNQSSGSTKNVNEVKNSESKSKNTIDKVKGRRIRLLTFT 181

BLAST of Cp4.1LG08g07120 vs. ExPASy TrEMBL
Match: A0A0A0L6R0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017150 PE=4 SV=1)

HSP 1 Score: 214 bits (544), Expect = 1.29e-67
Identity = 116/154 (75.32%), Postives = 129/154 (83.77%), Query Frame = 0

Query: 1   AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ 60
           A VS+ENKVLV+VY+E+QEPR+ VNR QRD+VNK VRNQWK++ ANKGYNRRTELLKYSQ
Sbjct: 2   ATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQ 61

Query: 61  RLRKSAQSPASPYLPTPELISVTNKQPIQRNVAIN------PLVNLRAKPKGARFTSCFG 120
           RLRKSA+SPASPY+ TPE I + NKQPI R++AIN       LVNL  KPKG RFTSCFG
Sbjct: 62  RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSFSLVNLCGKPKGPRFTSCFG 121

Query: 121 NLIQRSYKALTSFQPKNKRQNQNQSSGSTKNANE 148
           NLIQRSYKALTSFQPK  RQ QNQSSGSTK  NE
Sbjct: 122 NLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNE 155

BLAST of Cp4.1LG08g07120 vs. ExPASy TrEMBL
Match: A0A5A7TG76 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00700 PE=4 SV=1)

HSP 1 Score: 137 bits (346), Expect = 1.10e-35
Identity = 71/95 (74.74%), Postives = 84/95 (88.42%), Query Frame = 0

Query: 1   AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ 60
           A VS+ENKVLV+VY+E+QEPR+ VNR QR +VNK VRNQWK++ ANKGYNRRTELLKYSQ
Sbjct: 272 ATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYSQ 331

Query: 61  RLRKSAQSPASPYLPTPELISVTNKQPIQRNVAIN 95
           RLRKSA+SPASPY+ TPE I + NKQPI R++AIN
Sbjct: 332 RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAIN 366

BLAST of Cp4.1LG08g07120 vs. ExPASy TrEMBL
Match: A0A061GAZ6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_015850 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.58e-09
Identity = 57/142 (40.14%), Postives = 82/142 (57.75%), Query Frame = 0

Query: 9   VLVSVYTERQEPRVAVNRV---QRDDVNKTVRNQWKKEI-ANKGYNRRTELLKYSQRLRK 68
           VLV+VY E+    V+ N     Q   ++ T++ +  K   A KGYNRR ELL YSQRLR+
Sbjct: 31  VLVTVYAEKPRRSVSSNHQHHRQHHYLHHTIKQELIKHGGAGKGYNRRAELLHYSQRLRE 90

Query: 69  SAQSPASPYLPTPELISVTNKQPIQRNVAINPLVNLRAKPKGARFTSCFGN---LIQRSY 128
           SA+S AS  L + + +S  ++Q      A N +V+++ KPK +R  +CF N   LI R  
Sbjct: 91  SARSAASTALQS-KPVSSNDQQ------ASNKIVSVQRKPKCSRTPACFDNWGILIPRFL 150

Query: 129 KALTSFQPKNKRQNQNQSSGST 143
           ++LT+ Q K K   + Q  GST
Sbjct: 151 RSLTTLQAK-KTGKKKQHCGST 164

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG7030163.14.14e-8788.96hypothetical protein SDJN02_08510, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_011650375.16.95e-7371.59uncharacterized protein LOC105434777 isoform X2 [Cucumis sativus] >KAE8650041.1 ... [more]
XP_008448776.11.40e-7271.59PREDICTED: uncharacterized protein LOC103490841 isoform X2 [Cucumis melo][more]
XP_011650374.11.62e-7069.23uncharacterized protein LOC105434777 isoform X1 [Cucumis sativus][more]
XP_008448775.13.27e-7069.23PREDICTED: uncharacterized protein LOC103490841 isoform X1 [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A1S3BL456.78e-7371.59uncharacterized protein LOC103490841 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3BKH31.58e-7069.23uncharacterized protein LOC103490841 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0L6R01.29e-6775.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017150 PE=4 SV=1[more]
A0A5A7TG761.10e-3574.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A061GAZ66.58e-0940.14Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_015850 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..150

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g07120.1Cp4.1LG08g07120.1mRNA