Cp4.1LG08g07090 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g07090
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Cp4.1LG08: 5578363 .. 5581425 (+)
RNA-Seq Expression	Cp4.1LG08g07090
Synteny	Cp4.1LG08g07090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTCGCCACCACTGCCTCCACCTTCTCGCTTTCCAAGCGAATATCGCCATTAACTGCTTCTTCCCATCATCGAAAATCTTCCCGAACCATGTCCTTTTCGCCCTCCTCTCTCAGAACCAAGCCACTTTCTACTAATTTTCTCGTCCCATTCGTCGGTGGGAGTGTTTCCGGGGACTTTTCAGGCGTGAAGCTCCGGCCGTCCTCTCTTAATCCGGATTCTTTCCGTGGATCCAAGGGCAAGCGGGGCGTTGTTACTATGGTAAGTGCCTGAACATTACTGTTCTTCCGGTGCCATTGGTTGTTTTTTTTAATAACTTTGGTTCACAATTGTAGTTTATGAGTCCTCTTCTGGCGAAAATTTCGCATATTGGGTTGAACTTTTGTTGCTTGTTTGTTATTTTATTACCTTGGTTCACTAAATTGTAGTTTACGAGTCCTCTTTTGGAGGATTTGTGCGATGCTTTGTGAAAAGTAGGGCAGAGATTGAAGATGTTTTACTTAGATGGGTGTGCTTGAATACTAATAAACGAAGCTCTCAATTTCAAATAGGTGGGGAGATTATATTGGAGTCTAGAAGATAGATTCAATTGGGAAAACTTTTGCGACTTTAACTACCTATCAATGTATATGTTGGCTTGAAAGAACCGACTCTGTTCTAAATTTAAACGATGAACAATGATTCTTAACTGTTAATGGCCTCCCCTAAACTCTAAAATGTTCTGTTGGGATCCATTCTCCATTCCTGCTTGTTTCTTGTGTCTTATCTACCTAATTTCTTTGAATAGGTTATTCCATTTTCAAGGGGAAGTGCATGGGAGCAACCTCCTCCAGATTTGGCATCATATTTATACAAGAATCGAATTGTTTACTTGGGCATGTCTCTTGTCCCTTCTGTCACGGAGTTGATACTTGCTGAATTTCTTTACCTTCAGTATGAGGATGAAGAAAAGCCTATATATCTCTACATTAACTCCACCGGAACAACAAAGGTTAACCATGCTTTAAAATTTTATGCGGATTAGCTTTGTTTGGATGTCTCATTTTCTCTAGCTTGAATTTTATGACCTTGGTTTTTTTTTCTTTTTTCTTTTTTCTTTTTTCATTTTTAATGGTCGTGATGAAGCAACTGGCACAGGCTTTTGTTGAGTTAATTACTTGCGCTAATCGTTTATAGTGATGAGACAGCATCAGGAGTAGGGAAAGTTGTATTCAATTTCCAGTTGCTGTTCTAATAGGAAAGCAGTGTTTCAGTTTTTTTTTTCTTGACAAAAAACAACACGCACAATGATGTGCTTCGATCTTTCATCCTCCCCTTCCTGTTTTCTACGGTCTTATAAAAAATGCAGCTTACCTTTTATTAAAGAAAATGTTTGTCATCTTTAACTTGCGTGCAGAAAAATGATTATTAACCTTGTGTCCTTTTCCATGTGATAGTAGATCATAATGAAATGCTTGTATTTTTCAGGGTGGTGAGAAATTGGGCTATGAGACTGAAGCATTTGCAGTCTATGATGTTATGAGGTTGTGATGTGAATCTTTTTATATAATTGGTCTGGTTTACGGATATTTAGAATCTCATTATTGCGCATTCAAGACTTTTCGAGGACCTAATGGAATATGTTTAATGTCCATCACTATTTTCCACTGCAGGTATATTAAGCCTCCTATATTCACATTATGCGTTGGTAATGCTTGGGGTGAAGCATCACTTCTTTTGTCAGCTGGTGCTAAGGGAAACCGTTCTGCATTGCCCTCATCAACAATAATGATGAAGCAGGTATTCTATATCAGAAACTTATGTCTTTGTTTTGTTTTCTCCCCTTATCTTCTATTCATTTCCTACCTTCACAAAGGTGTTTTTATCTTGCTTAGACTCGTTTCACTGCATTTAAGCTGATGTTTTTATATATTTCTGTGCAGTTCTAATCCTTTTCCCCCTCTTTCAATCTGCAGCCAATTGCAAGGTTTCAGGGTCAAGCAACAGACGTTGAGCTTGCTAGAAAAGAAATACGAAATGTGAAGGTAGAGCTGGTAAGATCATGGCTCAAACTTGTATACTGGATTTCCTTCTCTACATTGTTATACTCTATTTTTGTCCTCGTGAAATGAGCAGTATGGATGTGCATTTGTTATTGTAGAATCGGGTTCTCAATTGGCCGTTATTATTATTATTATTATTTGGTTAAGAAACCAAAATCATGTACAAAATAAGGACAAGGGTTATAGAAAGGGGAAGGACTTGGGCTAGTGACAAAAATGCCTATCAAAAGAGGCATGTAGAAGTGGCTAAAAAGTTAGTTCTAGGCACTGGCAACAACATAAAGGAAGGGGTCCATGTAGCTGTTGTGCCTGCCCCCTTCTTAGTCAATGGGGCAGTAAGTTCGGCTTCCACTAGAAAATAAAGAATCCACTTCAGATAAACCACTCCGCTAGGCAACGTGTGGAATAGCCGAGAGCGAACCTTTTTGCATATATAATCCAAGTCGAGAGTGGAGTTACGCCCCCTTCTTAGTCTATGGGGCAGCAGGTTCGGCATCCACTAGAAAAGAGAGAATCCACTTCAGATAACCACGTCTCAGGTAGGCAGCATGTGGAATAGCAGAGAGTGGACCTTTTTGGATATATAATTCAAGTTGAGAGTGGAGTTACAGAAACAGTCGTCCAATGAAAAACAACTTCTATTTGTGTTATAGGGTTGTTTCTGGAAAGTTGAAAAGTTACATTGTTCCCTCTAAACAAGTGTAGGTAAATGAACTTGTAGTTATTTACATTTTAACATTGATATTGAAGGTTAAGCTTTATGCGAAGCATATCGGAAAGTCGCCTGAGGAGATCGAAGCTGATATCAGGCGGCCAAAATATTTTAGTCCCAGCGAAGCAGTTGAATATGGTATCATAGATAAGGTACCTGAACTGCACAGTGGTTACTAATTCATCATATGTTATTGAGATTCGTTTTAAATTGCATATCATTGACTTTCACCAGGTGATATACAATGAAAGAAGCACCGAAGACCGGGGGGTTGTATCTGACCTGAAAAAAGCACAATTGATTTAG

mRNA sequence

ATGGAGGTCGCCACCACTGCCTCCACCTTCTCGCTTTCCAAGCGAATATCGCCATTAACTGCTTCTTCCCATCATCGAAAATCTTCCCGAACCATGTCCTTTTCGCCCTCCTCTCTCAGAACCAAGCCACTTTCTACTAATTTTCTCGTCCCATTCGTCGGTGGGAGTGTTTCCGGGGACTTTTCAGGCGTGAAGCTCCGGCCGTCCTCTCTTAATCCGGATTCTTTCCGTGGATCCAAGGGCAAGCGGGGCGTTGTTACTATGGTTATTCCATTTTCAAGGGGAAGTGCATGGGAGCAACCTCCTCCAGATTTGGCATCATATTTATACAAGAATCGAATTGTTTACTTGGGCATGTCTCTTGTCCCTTCTGTCACGGAGTTGATACTTGCTGAATTTCTTTACCTTCAGTATGAGGATGAAGAAAAGCCTATATATCTCTACATTAACTCCACCGGAACAACAAAGGGTGGTGAGAAATTGGGCTATGAGACTGAAGCATTTGCAGTCTATGATGTTATGAGGTATATTAAGCCTCCTATATTCACATTATGCGTTGGTAATGCTTGGGGTGAAGCATCACTTCTTTTGTCAGCTGGTGCTAAGGGAAACCGTTCTGCATTGCCCTCATCAACAATAATGATGAAGCAGCCAATTGCAAGGTTTCAGGGTCAAGCAACAGACGTTGAGCTTGCTAGAAAAGAAATACGAAATGTGAAGGTAGAGCTGGTTAAGCTTTATGCGAAGCATATCGGAAAGTCGCCTGAGGAGATCGAAGCTGATATCAGGCGGCCAAAATATTTTAGTCCCAGCGAAGCAGTTGAATATGGTATCATAGATAAGGTGATATACAATGAAAGAAGCACCGAAGACCGGGGGGTTGTATCTGACCTGAAAAAAGCACAATTGATTTAG

Coding sequence (CDS)

ATGGAGGTCGCCACCACTGCCTCCACCTTCTCGCTTTCCAAGCGAATATCGCCATTAACTGCTTCTTCCCATCATCGAAAATCTTCCCGAACCATGTCCTTTTCGCCCTCCTCTCTCAGAACCAAGCCACTTTCTACTAATTTTCTCGTCCCATTCGTCGGTGGGAGTGTTTCCGGGGACTTTTCAGGCGTGAAGCTCCGGCCGTCCTCTCTTAATCCGGATTCTTTCCGTGGATCCAAGGGCAAGCGGGGCGTTGTTACTATGGTTATTCCATTTTCAAGGGGAAGTGCATGGGAGCAACCTCCTCCAGATTTGGCATCATATTTATACAAGAATCGAATTGTTTACTTGGGCATGTCTCTTGTCCCTTCTGTCACGGAGTTGATACTTGCTGAATTTCTTTACCTTCAGTATGAGGATGAAGAAAAGCCTATATATCTCTACATTAACTCCACCGGAACAACAAAGGGTGGTGAGAAATTGGGCTATGAGACTGAAGCATTTGCAGTCTATGATGTTATGAGGTATATTAAGCCTCCTATATTCACATTATGCGTTGGTAATGCTTGGGGTGAAGCATCACTTCTTTTGTCAGCTGGTGCTAAGGGAAACCGTTCTGCATTGCCCTCATCAACAATAATGATGAAGCAGCCAATTGCAAGGTTTCAGGGTCAAGCAACAGACGTTGAGCTTGCTAGAAAAGAAATACGAAATGTGAAGGTAGAGCTGGTTAAGCTTTATGCGAAGCATATCGGAAAGTCGCCTGAGGAGATCGAAGCTGATATCAGGCGGCCAAAATATTTTAGTCCCAGCGAAGCAGTTGAATATGGTATCATAGATAAGGTGATATACAATGAAAGAAGCACCGAAGACCGGGGGGTTGTATCTGACCTGAAAAAAGCACAATTGATTTAG

Protein sequence

MEVATTASTFSLSKRISPLTASSHHRKSSRTMSFSPSSLRTKPLSTNFLVPFVGGSVSGDFSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKKAQLI

Homology

[Close]

BLAST of Cp4.1LG08g07090 vs. ExPASy Swiss-Prot
Match: Q8LB10 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR4 PE=1 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 2.1e-126
Identity = 236/306 (77.12%), Postives = 265/306 (86.60%), Query Frame = 0


Query: 1   MEV-ATTASTF-SLSKRISPLTASSHHRKSSRTMSFSPSSLRTKPLSTNFLVPFVGGSVS 60
           MEV A TA++F +L  R S +  SS     S+    S SSLR   LS  FL P+ GGS+S
Sbjct: 1   MEVAAATATSFTTLRARTSAIIPSSTRNLRSKPRFSSSSSLRAS-LSNGFLSPYTGGSIS 60

Query: 61  GDFSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLG 120
            D  G KLR  SLNP +F  SK KRGVVTMVIPFS+GSA EQPPPDLASYL+KNRIVYLG
Sbjct: 61  SDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLG 120

Query: 121 MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIK 180
           MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK GEKLGY+TEAFA+YDVM Y+K
Sbjct: 121 MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVK 180

Query: 181 PPIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRN 240
           PPIFTLCVGNAWGEA+LLL+AGAKGNRSALPSSTIM+KQPIARFQGQATDVE+ARKEI++
Sbjct: 181 PPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIKH 240

Query: 241 VKVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDL 300
           +K E+VKLY+KHIGKSPE+IEAD++RPKYFSP+EAVEYGIIDKV+YNER ++DRGVVSDL
Sbjct: 241 IKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGSQDRGVVSDL 300

Query: 301 KKAQLI 305
           KKAQLI
Sbjct: 301 KKAQLI 305

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BLAST of Cp4.1LG08g07090 vs. ExPASy Swiss-Prot
Match: Q9L4P4 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpR PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.0e-50
Identity = 96/204 (47.06%), Postives = 142/204 (69.61%), Query Frame = 0


Query: 91  PFSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPS----------VTELILAEFLYLQYED 150
           P+    ++  PPPDL S L K RI+YLGM L  S          VTELI+A+ LYL++++
Sbjct: 11  PYYGDVSYRTPPPDLPSLLLKERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDN 70

Query: 151 EEKPIYLYINSTGTT-KGGEKLGYETEAFAVYDVMRYIKPPIFTLCVGNAWGEASLLLSA 210
            EKPIY YINSTGT+   G+ +GYETEAFA+ D MRYIKPP+ T+C+G A G A+++LS 
Sbjct: 71  PEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSG 130

Query: 211 GAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVKVELVKLYAKHIGKSPEEIE 270
           G  GNR++LP +TI++ QP    QGQA+D+++  KE+   K  +++++A++ G+ P+ + 
Sbjct: 131 GTPGNRASLPHATIVLNQPRTGAQGQASDIQIRAKEVLANKRTMLEIFARNTGQDPDRLA 190

Query: 271 ADIRRPKYFSPSEAVEYGIIDKVI 284
            D  R  Y +P++AVEYG+ID+V+
Sbjct: 191 RDTDRMLYMTPAQAVEYGLIDRVL 214

[Close]

BLAST of Cp4.1LG08g07090 vs. ExPASy Swiss-Prot
Match: P74466 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=clpR PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.8e-46
Identity = 92/198 (46.46%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 97  AWEQPPPDLASYLYKNRIVYLGMSLVPS----------VTELILAEFLYLQYEDEEKPIY 156
           A++ PPPDL S L K RIVYLGM L  S          VT+LI+A+ LYLQ++D +KPIY
Sbjct: 15  AFKTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIY 74

Query: 157 LYINSTGTT-KGGEKLGYETEAFAVYDVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNR 216
            YINSTGT+   G+ +G+ETEAFA+ D + YIKPP+ T+C+G A G A+++LS+G KG R
Sbjct: 75  FYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSSGTKGYR 134

Query: 217 SALPSSTIMMKQPIARFQGQATDVELARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRP 276
           ++LP +TI++ Q     QGQATD+++  KE+ + K  ++++ + + G++ E++  D+ R 
Sbjct: 135 ASLPHATIVLNQNRTGAQGQATDIQIRAKEVISNKQTMLEILSLNTGQTQEKLAKDMDRT 194

Query: 277 KYFSPSEAVEYGIIDKVI 284
            Y +P++A EYG+ID+V+
Sbjct: 195 FYLTPAQAKEYGLIDRVL 212

[Close]

BLAST of Cp4.1LG08g07090 vs. ExPASy Swiss-Prot
Match: Q7NEW1 (ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.1e-42
Identity = 90/192 (46.88%), Postives = 124/192 (64.58%), Query Frame = 0


Query: 92  FSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINS 151
           +S    +  PPPDL S L   RIVYLG  +   V EL++A+ LYL+ ED  KPI +YINS
Sbjct: 16  YSGDYGFRTPPPDLPSLLLNERIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINS 75

Query: 152 TGTTKGGEKLGYETEAFAVYDVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNRSALPSS 211
            G        G+ET AFAVYD MR+++ PI T+C+G A G ++LL++AG KG R +LP+S
Sbjct: 76  PGVA------GFETSAFAVYDTMRHVRMPIKTICLGLAGGFSALLMAAGTKGQRMSLPNS 135

Query: 212 TIMMKQPIARFQGQATDVELARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRPKYFSPS 271
            I++ QP    +GQATD+ +  +E+   K  L +L + H GK+ E+I+ D  R  Y SP 
Sbjct: 136 RIILYQPYGGARGQATDINIRAQELLTTKRTLNQLLSIHTGKTVEQIDKDTERLFYMSPQ 195

Query: 272 EAVEYGIIDKVI 284
           EAV YG+IDKV+
Sbjct: 196 EAVSYGLIDKVL 201

[Close]

BLAST of Cp4.1LG08g07090 vs. ExPASy Swiss-Prot
Match: Q8L770 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR3 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.1e-42
Identity = 90/187 (48.13%), Postives = 127/187 (67.91%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-GGE 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+  GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177

Query: 161 KLGYETEAFAVYDVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPI 220
            +G E+E FA+YD +  +K  + T+CVG A G+A LLLSAG KG R  +P +  M++QP 
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPR 237

Query: 221 ARFQG--QATDVELARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYG 280
               G   A+DV +  KE+   +  LV+L +KH G S E +   +RRP Y    +A E+G
Sbjct: 238 VPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFG 297

Query: 281 IIDKVIY 285
           +ID++++
Sbjct: 298 VIDRILW 304

[Close]

BLAST of Cp4.1LG08g07090 vs. NCBI nr
Match: XP_023540770.1 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 589 bits (1519), Expect = 5.48e-212
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MEVATTASTFSLSKRISPLTASSHHRKSSRTMSFSPSSLRTKPLSTNFLVPFVGGSVSGD 60
           MEVATTASTFSLSKRISPLTASSHHRKSSRTMSFSPSSLRTKPLSTNFLVPFVGGSVSGD
Sbjct: 1   MEVATTASTFSLSKRISPLTASSHHRKSSRTMSFSPSSLRTKPLSTNFLVPFVGGSVSGD 60

Query: 61  FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180
           LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180

Query: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240
           IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK
Sbjct: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240

Query: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300
           VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK
Sbjct: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300

Query: 301 AQLI 304
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of Cp4.1LG08g07090 vs. NCBI nr
Match: KAG7030161.1 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 585 bits (1507), Expect = 7.76e-210
Identity = 300/304 (98.68%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MEVATTASTFSLSKRISPLTASSHHRKSSRTMSFSPSSLRTKPLSTNFLVPFVGGSVSGD 60
           MEVATTASTFSL+KRISPLTASSHHRKS+RTMSFSPSSLRTKPLSTNFL+PFVGGSVSGD
Sbjct: 21  MEVATTASTFSLTKRISPLTASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVSGD 80

Query: 61  FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRPSSLNP+SFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 81  FSGVKLRPSSLNPNSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 140

Query: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180
           LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP
Sbjct: 141 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 200

Query: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240
           IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK
Sbjct: 201 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 260

Query: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300
           VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK
Sbjct: 261 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 320

Query: 301 AQLI 304
           AQLI
Sbjct: 321 AQLI 324

[Close]

BLAST of Cp4.1LG08g07090 vs. NCBI nr
Match: XP_022934823.1 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 583 bits (1503), Expect = 1.51e-209
Identity = 299/304 (98.36%), Postives = 303/304 (99.67%), Query Frame = 0


Query: 1   MEVATTASTFSLSKRISPLTASSHHRKSSRTMSFSPSSLRTKPLSTNFLVPFVGGSVSGD 60
           MEVATTASTFSL+KRISPL ASSHHRKS+RTMSFSPSSLRTKPLSTNFL+PFVGGSVSGD
Sbjct: 1   MEVATTASTFSLTKRISPLIASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVSGD 60

Query: 61  FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSG+KLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGLKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180
           LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180

Query: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240
           IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK
Sbjct: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240

Query: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300
           VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK
Sbjct: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300

Query: 301 AQLI 304
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of Cp4.1LG08g07090 vs. NCBI nr
Match: XP_023005482.1 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 580 bits (1496), Expect = 1.76e-208
Identity = 297/304 (97.70%), Postives = 301/304 (99.01%), Query Frame = 0


Query: 1   MEVATTASTFSLSKRISPLTASSHHRKSSRTMSFSPSSLRTKPLSTNFLVPFVGGSVSGD 60
           MEVATTASTFSL+KRISPLTASSHHRKS+RTMS SPSSLRTKPLSTNFL+PFVGGSVSGD
Sbjct: 1   MEVATTASTFSLTKRISPLTASSHHRKSTRTMSLSPSSLRTKPLSTNFLIPFVGGSVSGD 60

Query: 61  FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180
           LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180

Query: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240
           IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK
Sbjct: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240

Query: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300
            ELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKV+YNER TEDRGVVSDLKK
Sbjct: 241 AELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERGTEDRGVVSDLKK 300

Query: 301 AQLI 304
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of Cp4.1LG08g07090 vs. NCBI nr
Match: KAG6596886.1 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 569 bits (1466), Expect = 5.07e-204
Identity = 291/297 (97.98%), Postives = 294/297 (98.99%), Query Frame = 0


Query: 1   MEVATTASTFSLSKRISPLTASSHHRKSSRTMSFSPSSLRTKPLSTNFLVPFVGGSVSGD 60
           MEVATTASTFSL+KRISPLTASSHHRKS+RTMSFSPSSLRTKPLSTNFL+PFVGGSVSGD
Sbjct: 1   MEVATTASTFSLTKRISPLTASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVSGD 60

Query: 61  FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180
           LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180

Query: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240
           IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK
Sbjct: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240

Query: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSD 297
           VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRG   D
Sbjct: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGEYQD 297

[Close]

BLAST of Cp4.1LG08g07090 vs. ExPASy TrEMBL
Match: A0A6J1F8U0 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111441877 PE=3 SV=1)

HSP 1 Score: 583 bits (1503), Expect = 7.29e-210
Identity = 299/304 (98.36%), Postives = 303/304 (99.67%), Query Frame = 0


Query: 1   MEVATTASTFSLSKRISPLTASSHHRKSSRTMSFSPSSLRTKPLSTNFLVPFVGGSVSGD 60
           MEVATTASTFSL+KRISPL ASSHHRKS+RTMSFSPSSLRTKPLSTNFL+PFVGGSVSGD
Sbjct: 1   MEVATTASTFSLTKRISPLIASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVSGD 60

Query: 61  FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSG+KLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGLKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180
           LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180

Query: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240
           IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK
Sbjct: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240

Query: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300
           VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK
Sbjct: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300

Query: 301 AQLI 304
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of Cp4.1LG08g07090 vs. ExPASy TrEMBL
Match: A0A6J1KT89 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111498455 PE=3 SV=1)

HSP 1 Score: 580 bits (1496), Expect = 8.51e-209
Identity = 297/304 (97.70%), Postives = 301/304 (99.01%), Query Frame = 0


Query: 1   MEVATTASTFSLSKRISPLTASSHHRKSSRTMSFSPSSLRTKPLSTNFLVPFVGGSVSGD 60
           MEVATTASTFSL+KRISPLTASSHHRKS+RTMS SPSSLRTKPLSTNFL+PFVGGSVSGD
Sbjct: 1   MEVATTASTFSLTKRISPLTASSHHRKSTRTMSLSPSSLRTKPLSTNFLIPFVGGSVSGD 60

Query: 61  FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180
           LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180

Query: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240
           IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK
Sbjct: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240

Query: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300
            ELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKV+YNER TEDRGVVSDLKK
Sbjct: 241 AELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERGTEDRGVVSDLKK 300

Query: 301 AQLI 304
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of Cp4.1LG08g07090 vs. ExPASy TrEMBL
Match: A0A6J1DRW9 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111022646 PE=3 SV=1)

HSP 1 Score: 541 bits (1394), Expect = 2.98e-193
Identity = 275/304 (90.46%), Postives = 289/304 (95.07%), Query Frame = 0


Query: 1   MEVATTASTFSLSKRISPLTASSHHRKSSRTMSFSPSSLRTKPLSTNFLVPFVGGSVSGD 60
           MEVATTASTF+L+KRISP   SSH+ KS+R +SFS SSLR  PLSTNFL PF GGSVSGD
Sbjct: 1   MEVATTASTFALTKRISPSITSSHNPKSNRALSFSSSSLRPTPLSTNFLAPFAGGSVSGD 60

Query: 61  FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           F+GVKLRPSSLNPDS RGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FAGVKLRPSSLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180
           LVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTKGGEKLGYETEAFA+YDVMRY+KPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPP 180

Query: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240
           IFTLCVGNAWGEA+LLL+AGA+GNRSALPSSTIMMKQPIARFQGQATD+ELARKE+RNVK
Sbjct: 181 IFTLCVGNAWGEAALLLAAGARGNRSALPSSTIMMKQPIARFQGQATDIELARKEVRNVK 240

Query: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300
            ELVKLYAKHIGKS EEIEADIRRPKYFSPSEAVEYGIIDKV+YNERS EDRGVVSDLKK
Sbjct: 241 AELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERSPEDRGVVSDLKK 300

Query: 301 AQLI 304
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of Cp4.1LG08g07090 vs. ExPASy TrEMBL
Match: A0A5A7THF6 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00710 PE=3 SV=1)

HSP 1 Score: 535 bits (1377), Expect = 1.16e-190
Identity = 270/304 (88.82%), Postives = 292/304 (96.05%), Query Frame = 0


Query: 1   MEVATTASTFSLSKRISPLTASSHHRKSSRTMSFSPSSLRTKPLSTNFLVPFVGGSVSGD 60
           MEVATTAS+F+L+KRISPL ASS++ KS+RT+S S SS+RT PLSTNFL+PF GGSVSGD
Sbjct: 1   MEVATTASSFALTKRISPLFASSNYGKSNRTLSLSSSSVRTAPLSTNFLIPFAGGSVSGD 60

Query: 61  FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRP SLNP+ F GSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPYSLNPNCFPGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180
           LVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTKGGEKLGYETEAFA+YDVMRY+KPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPP 180

Query: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240
           IFTLCVGNAWGEA+LLL+AGA+GNRSALPSSTIM+KQPIARFQGQATDVELARKE+RNVK
Sbjct: 181 IFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDVELARKEVRNVK 240

Query: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300
            ELVKL+AKH+GKS EEIEADIRRPKYF+PSEAVEYGIIDKV+YNER+TEDRGVVSDLKK
Sbjct: 241 AELVKLFAKHVGKSTEEIEADIRRPKYFTPSEAVEYGIIDKVLYNERTTEDRGVVSDLKK 300

Query: 301 AQLI 304
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of Cp4.1LG08g07090 vs. ExPASy TrEMBL
Match: A0A1S3BJW8 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103490843 PE=3 SV=1)

HSP 1 Score: 535 bits (1377), Expect = 1.16e-190
Identity = 270/304 (88.82%), Postives = 292/304 (96.05%), Query Frame = 0


Query: 1   MEVATTASTFSLSKRISPLTASSHHRKSSRTMSFSPSSLRTKPLSTNFLVPFVGGSVSGD 60
           MEVATTAS+F+L+KRISPL ASS++ KS+RT+S S SS+RT PLSTNFL+PF GGSVSGD
Sbjct: 1   MEVATTASSFALTKRISPLFASSNYGKSNRTLSLSSSSVRTAPLSTNFLIPFAGGSVSGD 60

Query: 61  FSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRP SLNP+ F GSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPYSLNPNCFPGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIKPP 180
           LVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTKGGEKLGYETEAFA+YDVMRY+KPP
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPP 180

Query: 181 IFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRNVK 240
           IFTLCVGNAWGEA+LLL+AGA+GNRSALPSSTIM+KQPIARFQGQATDVELARKE+RNVK
Sbjct: 181 IFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDVELARKEVRNVK 240

Query: 241 VELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDLKK 300
            ELVKL+AKH+GKS EEIEADIRRPKYF+PSEAVEYGIIDKV+YNER+TEDRGVVSDLKK
Sbjct: 241 AELVKLFAKHVGKSTEEIEADIRRPKYFTPSEAVEYGIIDKVLYNERTTEDRGVVSDLKK 300

Query: 301 AQLI 304
           AQLI
Sbjct: 301 AQLI 304

[Close]

BLAST of Cp4.1LG08g07090 vs. TAIR 10
Match: AT4G17040.1 (CLP protease R subunit 4 )

HSP 1 Score: 453.4 bits (1165), Expect = 1.5e-127
Identity = 236/306 (77.12%), Postives = 265/306 (86.60%), Query Frame = 0


Query: 1   MEV-ATTASTF-SLSKRISPLTASSHHRKSSRTMSFSPSSLRTKPLSTNFLVPFVGGSVS 60
           MEV A TA++F +L  R S +  SS     S+    S SSLR   LS  FL P+ GGS+S
Sbjct: 1   MEVAAATATSFTTLRARTSAIIPSSTRNLRSKPRFSSSSSLRAS-LSNGFLSPYTGGSIS 60

Query: 61  GDFSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLG 120
            D  G KLR  SLNP +F  SK KRGVVTMVIPFS+GSA EQPPPDLASYL+KNRIVYLG
Sbjct: 61  SDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLG 120

Query: 121 MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMRYIK 180
           MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK GEKLGY+TEAFA+YDVM Y+K
Sbjct: 121 MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVK 180

Query: 181 PPIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVELARKEIRN 240
           PPIFTLCVGNAWGEA+LLL+AGAKGNRSALPSSTIM+KQPIARFQGQATDVE+ARKEI++
Sbjct: 181 PPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIKH 240

Query: 241 VKVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTEDRGVVSDL 300
           +K E+VKLY+KHIGKSPE+IEAD++RPKYFSP+EAVEYGIIDKV+YNER ++DRGVVSDL
Sbjct: 241 IKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGSQDRGVVSDL 300

Query: 301 KKAQLI 305
           KKAQLI
Sbjct: 301 KKAQLI 305

[Close]

BLAST of Cp4.1LG08g07090 vs. TAIR 10
Match: AT1G09130.1 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 173.3 bits (438), Expect = 2.9e-43
Identity = 90/187 (48.13%), Postives = 127/187 (67.91%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-GGE 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+  GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177

Query: 161 KLGYETEAFAVYDVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPI 220
            +G E+E FA+YD +  +K  + T+CVG A G+A LLLSAG KG R  +P +  M++QP 
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPR 237

Query: 221 ARFQG--QATDVELARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYG 280
               G   A+DV +  KE+   +  LV+L +KH G S E +   +RRP Y    +A E+G
Sbjct: 238 VPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFG 297

Query: 281 IIDKVIY 285
           +ID++++
Sbjct: 298 VIDRILW 304

[Close]

BLAST of Cp4.1LG08g07090 vs. TAIR 10
Match: AT1G09130.2 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 173.3 bits (438), Expect = 2.9e-43
Identity = 90/187 (48.13%), Postives = 127/187 (67.91%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-GGE 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+  GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177

Query: 161 KLGYETEAFAVYDVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPI 220
            +G E+E FA+YD +  +K  + T+CVG A G+A LLLSAG KG R  +P +  M++QP 
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPR 237

Query: 221 ARFQG--QATDVELARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYG 280
               G   A+DV +  KE+   +  LV+L +KH G S E +   +RRP Y    +A E+G
Sbjct: 238 VPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFG 297

Query: 281 IIDKVIY 285
           +ID++++
Sbjct: 298 VIDRILW 304

[Close]

BLAST of Cp4.1LG08g07090 vs. TAIR 10
Match: AT1G09130.3 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 173.3 bits (438), Expect = 2.9e-43
Identity = 90/187 (48.13%), Postives = 127/187 (67.91%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-GGE 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+  GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177

Query: 161 KLGYETEAFAVYDVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPI 220
            +G E+E FA+YD +  +K  + T+CVG A G+A LLLSAG KG R  +P +  M++QP 
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPR 237

Query: 221 ARFQG--QATDVELARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYG 280
               G   A+DV +  KE+   +  LV+L +KH G S E +   +RRP Y    +A E+G
Sbjct: 238 VPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFG 297

Query: 281 IIDKVIY 285
           +ID++++
Sbjct: 298 VIDRILW 304

[Close]

BLAST of Cp4.1LG08g07090 vs. TAIR 10
Match: AT1G49970.1 (CLP protease proteolytic subunit 1 )

HSP 1 Score: 160.6 bits (405), Expect = 2.0e-39
Identity = 97/242 (40.08%), Postives = 142/242 (58.68%), Query Frame = 0


Query: 56  SVSGDFSGVKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQP---PPDLASYLYKN 115
           S+SG  +    R  S++   +RG  G             G   E+P   PPDL S L   
Sbjct: 134 SMSG-MNAADARRYSMSVQMYRGGGG-------------GGGSERPRTAPPDLPSLLLDA 193

Query: 116 RIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGT-TKGGEKLGYETEAFAVY 175
           RI YLGM +VP+VTEL++A+F++L Y++  KPIYLYINS GT  +  E +G ETEA+A+ 
Sbjct: 194 RICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVGSETEAYAIA 253

Query: 176 DVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNRSALP-SSTIMMKQPIARFQGQATDVE 235
           D + Y K  ++T+  G A+G+A++LLS G KG R+  P SST +    + R  G A D+ 
Sbjct: 254 DTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNRSSGAAIDMW 313

Query: 236 LARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTE 293
           +  KE+       ++L AK  GKS E+I  DI+RPKY     A++YGI DK+  ++ S+ 
Sbjct: 314 IKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIADKIADSQDSSF 361

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g07090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB10	2.1e-126	77.12	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
Q9L4P4	7.0e-50	47.06	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus el...	[more]
P74466	2.8e-46	46.46	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp...	[more]
Q7NEW1	4.1e-42	46.88	ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter violaceus (strai...	[more]
Q8L770	4.1e-42	48.13	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ...	[more]

BLAST of Cp4.1LG08g07090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540770.1	5.48e-212	100.00	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
KAG7030161.1	7.76e-210	98.68	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic,...	[more]
XP_022934823.1	1.51e-209	98.36	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
XP_023005482.1	1.76e-208	97.70	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
KAG6596886.1	5.07e-204	97.98	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic,...	[more]

BLAST of Cp4.1LG08g07090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F8U0	7.29e-210	98.36	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KT89	8.51e-209	97.70	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1DRW9	2.98e-193	90.46	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A5A7THF6	1.16e-190	88.82	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BJW8	1.16e-190	88.82	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Cp4.1LG08g07090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17040.1	1.5e-127	77.12	CLP protease R subunit 4	[more]
AT1G09130.1	2.9e-43	48.13	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G09130.2	2.9e-43	48.13	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G09130.3	2.9e-43	48.13	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G49970.1	2.0e-39	40.08	CLP protease proteolytic subunit 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 229..249
None	No IPR available	GENE3D	3.90.226.10		coord: 76..291 e-value: 9.2E-67 score: 226.6
None	No IPR available	PANTHER	PTHR10381:SF65	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 16..303
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 261..280 score: 44.62 coord: 104..119 score: 40.62 coord: 183..200 score: 45.42 coord: 144..164 score: 33.93 coord: 204..223 score: 39.25
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 104..282 e-value: 3.46252E-88 score: 258.911
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 104..285 e-value: 1.1E-50 score: 172.0
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 16..303
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 99..286

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g07090.1	Cp4.1LG08g07090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009368	endopeptidase Clp complex
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity