Cp4.1LG08g06980 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g06980
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	novel plant SNARE 11-like
Location	Cp4.1LG08: 5448272 .. 5452165 (+)
RNA-Seq Expression	Cp4.1LG08g06980
Synteny	Cp4.1LG08g06980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTAGTAAAAAACCCCATTCTATATTATATTCTTTTCTAGATCTTAGAAGCCTATAGAAACAATAAAATTCAAGTTTTCTGTACTTTATTTGAAGGTTTTTGTGTTAATCACGAGGTGGAGCTGTTTTGTTTTTTGTGTGTTCAATTTCAAGGGGAAGAATCTGAAAGGATTTGGTTGTTGGGGGGTTTTTTTTAGATCGCCTTCTTCACCTGCATTGTTCAGATCTATCTGAATTCGGCTTAAGATTTTTTCTGGGTTTATTCGTATCTGTTTGTTTGAATCTGTTCATCGATTCCTCGAAGTTTTCGTTTCGTTTTTTCAATTGGGGTTTTGATTGAGATGATGAATGCATGAGAAATTGATGATCTGATTGAATTCATTTGTGATTTTTGATTCGCATTGGCATTTATTTGTTGGGGGATTTTCGCCATTGTCCCCGATCAATCGGATTCTGAGAATTTCACGAGGTGGGGGCTCAAGATCTCGAAGATCTTTGAATATTTTGGCACTTGTAATGATTGTAATGTGCCCTTATTTCTGAGAAGGACAAGAATCTGTGCATTTTGTTCGTTTGAGGGCTGAATTTGAATTGAAGATGGATGATAATTTATCTTCGATCAGCGAGGAGCTTGCAGATATCGAGGGGAAAATCAATGACATCTTTCGAGCTTTATCGTAAGAACTCATTGATTATTTATTTTTTTTTTCTCATCTTTCCCCTGTTCCAAGAACAAGAACATTTTGTCTCATTGTTTTTATTTTCTTGAAATAGTGAGCTTGAACTTTGATTAACATCTTTTATGAGCTTAAAAACCTCTTGTTTTCCATTGTTCTTGTTATATCTACAGAAATGGGTTTCAGAAGTTGGAGAAGATCAAGGACACAAATAGGAAGAGTAGACAATTGGAAGAATTGACAGATAAGATGCGTGATTGTAAGAGGTATATCACTTCTGATTCTTTCTGTGATGTAAAGTTTCATTAGTGATAATCTTGATGATTTTAAGAATAATGCCTTATAACCTTTGTTTAAGAAAGTGACAATGGAAATGGATTGATATGATGTAAATATATGTACATTATAAACAATACTTGATTATACTATGGCGGAGAAGAGCGGACATGGGGATTTGGGTCAGGGTGCAGTGTAACTAAGAGAGTCATTCCATTTAGGACGAGCCCGTGTGGTTATGGGGTGGGCACGAGCGGTTTGGTGTTTGAGCCAATTGATTAGATGATGACGATTGAACTTATTAGATTAGTATTAGCCGCCTATCCCGAAAGAGAATTGATTTGTATATCTATCTTTGTCTTGTTCCTGTTGCTTTTGGTGAACATTTTCTGTTTGTTTCTTGTACAGGCTTATTAAAGAGTTTGACAGAGAAGTCAAGGATTTGGAAGGTGTGAATGACTCGAACACTAATAAAATGCTGAGTGAGAGAAAGCAGTCTATGGTGAGATGCTAACAGTGAATTTGTTGAACTGTTCCTTCTTAGTTCTGTTCTTGTAGTGCTTTGTTATTGAATATTATCTGTATCTTTGTGCAGATCAAAGAATTGAACTCATATGTTGCCCTTAAAAAGCAGTAAGATTCAATATCTATCATCAATGTATTTGGTTGCTTCTGAGAACTTTGTTCTTTGTTTGAGAACTTATGTTCATTGTTTGTGTAACGACCCAACGTCCTCACTGGGATGTTGCTTGGTGTCCACTCCCCTTCGGGGCTCACCACCCGTTCTAGCTATGATACCATTTGTAACAGCCCAAACTCACTACTATCAGATATTGTCCTCTTTGGGCTTTACCTTTTCGCTTTCCTTTCAAAGTTTTTAAAATGCGTTTGTTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCATTGGATTGTGAGATCCCATGTCGATTAAAGAGAGGACGCTGAACCCTAAAGGGGGTGGATTGTGAGATCTCACGTTGGTTGGGGAGGAGAACAAAACATTCTTTATAAGGATGTGAAAACATCTCCCTAGTAGACATGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAAGACAATATCTGTTAGCAGTGGACTTGAGCTGATATAGTGTGATTCCATTTCCTTTCCCTTATCCTCAATACAATTGAGAAGTATTTTCTTTGCTATGTGAGTTGACTTAATGAACGAATGTCGTAACATGTCGACATTGACATCTGGTTGTTGTTGTTGATGATGATACAGGCATGCAAGCAACCTTGGAAACAAGCGTATCGACCTTTTTGATGGTCCTGGTGAAAATTATGGGGAAGATAATGTGTTGCTAGCTTCAAGTATGCATATTTTGTTTTTGTTTTTGTTATTTAGTTCAGGATTTAAACAACTTTTGAATATAATTGCTGTAGTAACAACTTTGAATATGAGCTGAAGCCTGACATACTATGGTTGGCAAAAAAATGGATATCTTGGTCTGGATGTCTGTTGTTTCAGCTTCAATCTTAAATTTTTCCTAAACGATAGGTGGGTTCGACCAAAACCCGACATGCTTACAACGTTGAATATGAACTATGGCTATATACGTTATTGCAGACATGACAAACCAGCAATTGATTGATAGTGGAAACAGGATGATGGATGAGACTGATGAAGCAATTGAGAGGTCAAAGAAGGTTAGTTTGTCTTCAGAACAACAATCTTCTGCTTCTATTTGTTTATGTTAGTGTGAGATCTCATATCGGTCGGAGAGGGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCTCTAGCAGACGCGTTTCAAAAACCTTTAGGGAAGTCTAAAAGGGGAAGCCCAAAGAGGACAATATCTGCTATGATGGGTTTGAACTGTTACTGTTGGATTCGAAATCTTGTTAAGTTGTTATCCTTTGAAATAAAACGATACATGGTGGGTGTATGTATGGAATAGGTCGTGCAAGAGACGGTAAACGTGGGAACAGAGACAGCAGCAGCACTGAAGGCGCAGACGGAGCAAATGAGCAGGATAGTAAACGAACTCGACTCCATACATTTCTCACTGAAGAAAGCCTCGAAACTGGTGAAGGAACTCGGTCGACAAATAGCGACCGATAAATGTATAATGGCCCTCCTGTTCATCATTGTCATTGGTGTCATTGCCATCATCATTGTCAAGGTAGTACCCACCATTCCCTCTTTCTTCTTTTATGTATATATAGCTGAACAACTCTGGCTCTGTCTCCCTCAGCTGGTGAATCCAAATAACAAGGACATTCAGGACATCCCAGGGCTGGCACCGCCCGTCCAGACACAGAGTCGGAGACTGCTATGGAATTCCAGTTAAAAACCCGAGTTACGAAAGAGAATCATCATCCATATCTTGAAACTCGCTTACTCTTCTCGGATTGCTCTGATGGGCTGAATGATGGAAAGAAGGTAAGGGATTGGCCATTCTTCATTCAAACATAAGCAAAAGGAGGGGGGGACAGCTTAGCCAGGTTCTTTCATACACCTATCCAAATTCAAAATGATTACCCCTTTACTTCAAAGCTACAAACTGTATTCACTTTCACTGGGTCCTGTCGTGTCCTGTCCTGTCCTATCCTGTCCTGTCCTGTCCTGAGATTTTACTGATTTTTATGTCTGGAATAATCTTAATCATTCATATGTTGTTATGCAAGTATGTATTCATAGAAATGTTTATGAAAGAGTGAAGGTAGGATCTGCATATTATATGATTTTAAACTATGGAGATCTTATACATTTTTGTATGTCACATGCATTGGGATACTTATCTAGTATGTCACATGTACTGGTGGGTTCATGTGCACGTACTTGGACCGTGTGTAAAGAAGTACTACTAATCCAATCTAAATTTAGCCTGAACTTGAAAGTAAAGTT

mRNA sequence

AACTAGTAAAAAACCCCATTCTATATTATATTCTTTTCTAGATCTTAGAAGCCTATAGAAACAATAAAATTCAAGTTTTCTGTACTTTATTTGAAGGTTTTTGTGTTAATCACGAGGTGGAGCTGTTTTGTTTTTTGTGTGTTCAATTTCAAGGGGAAGAATCTGAAAGGATTTGGTTGTTGGGGGGTTTTTTTTAGATCGCCTTCTTCACCTGCATTGTTCAGATCTATCTGAATTCGGCTTAAGATTTTTTCTGGGTTTATTCGTATCTGTTTGTTTGAATCTGTTCATCGATTCCTCGAAGTTTTCGTTTCGTTTTTTCAATTGGGGTTTTGATTGAGATGATGAATGCATGAGAAATTGATGATCTGATTGAATTCATTTGTGATTTTTGATTCGCATTGGCATTTATTTGTTGGGGGATTTTCGCCATTGTCCCCGATCAATCGGATTCTGAGAATTTCACGAGGTGGGGGCTCAAGATCTCGAAGATCTTTGAATATTTTGGCACTTGTAATGATTGTAATGTGCCCTTATTTCTGAGAAGGACAAGAATCTGTGCATTTTGTTCGTTTGAGGGCTGAATTTGAATTGAAGATGGATGATAATTTATCTTCGATCAGCGAGGAGCTTGCAGATATCGAGGGGAAAATCAATGACATCTTTCGAGCTTTATCAAATGGGTTTCAGAAGTTGGAGAAGATCAAGGACACAAATAGGAAGAGTAGACAATTGGAAGAATTGACAGATAAGATGCGTGATTGTAAGAGGCTTATTAAAGAGTTTGACAGAGAAGTCAAGGATTTGGAAGGTGTGAATGACTCGAACACTAATAAAATGCTGAGTGAGAGAAAGCAGTCTATGATCAAAGAATTGAACTCATATGTTGCCCTTAAAAAGCAGCATGCAAGCAACCTTGGAAACAAGCGTATCGACCTTTTTGATGGTCCTGGTGAAAATTATGGGGAAGATAATGTGTTGCTAGCTTCAAAGACAGCAGCAGCACTGAAGGCGCAGACGGAGCAAATGAGCAGGATAGTAAACGAACTCGACTCCATACATTTCTCACTGAAGAAAGCCTCGAAACTGGTGAAGGAACTCGGTCGACAAATAGCGACCGATAAATGTATAATGGCCCTCCTGTTCATCATTGTCATTGGTGTCATTGCCATCATCATTGTCAAGCTGGTGAATCCAAATAACAAGGACATTCAGGACATCCCAGGGCTGGCACCGCCCGTCCAGACACAGAGTCGGAGACTGCTATGGAATTCCAGTTAAAAACCCGAGTTACGAAAGAGAATCATCATCCATATCTTGAAACTCGCTTACTCTTCTCGGATTGCTCTGATGGGCTGAATGATGGAAAGAAGGTAAGGGATTGGCCATTCTTCATTCAAACATAAGCAAAAGGAGGGGGGGACAGCTTAGCCAGGTTCTTTCATACACCTATCCAAATTCAAAATGATTACCCCTTTACTTCAAAGCTACAAACTGTATTCACTTTCACTGGGTCCTGTCGTGTCCTGTCCTGTCCTATCCTGTCCTGTCCTGTCCTGAGATTTTACTGATTTTTATGTCTGGAATAATCTTAATCATTCATATGTTGTTATGCAAGTATGTATTCATAGAAATGTTTATGAAAGAGTGAAGGTAGGATCTGCATATTATATGATTTTAAACTATGGAGATCTTATACATTTTTGTATGTCACATGCATTGGGATACTTATCTAGTATGTCACATGTACTGGTGGGTTCATGTGCACGTACTTGGACCGTGTGTAAAGAAGTACTACTAATCCAATCTAAATTTAGCCTGAACTTGAAAGTAAAGTT

Coding sequence (CDS)

ATGGATGATAATTTATCTTCGATCAGCGAGGAGCTTGCAGATATCGAGGGGAAAATCAATGACATCTTTCGAGCTTTATCAAATGGGTTTCAGAAGTTGGAGAAGATCAAGGACACAAATAGGAAGAGTAGACAATTGGAAGAATTGACAGATAAGATGCGTGATTGTAAGAGGCTTATTAAAGAGTTTGACAGAGAAGTCAAGGATTTGGAAGGTGTGAATGACTCGAACACTAATAAAATGCTGAGTGAGAGAAAGCAGTCTATGATCAAAGAATTGAACTCATATGTTGCCCTTAAAAAGCAGCATGCAAGCAACCTTGGAAACAAGCGTATCGACCTTTTTGATGGTCCTGGTGAAAATTATGGGGAAGATAATGTGTTGCTAGCTTCAAAGACAGCAGCAGCACTGAAGGCGCAGACGGAGCAAATGAGCAGGATAGTAAACGAACTCGACTCCATACATTTCTCACTGAAGAAAGCCTCGAAACTGGTGAAGGAACTCGGTCGACAAATAGCGACCGATAAATGTATAATGGCCCTCCTGTTCATCATTGTCATTGGTGTCATTGCCATCATCATTGTCAAGCTGGTGAATCCAAATAACAAGGACATTCAGGACATCCCAGGGCTGGCACCGCCCGTCCAGACACAGAGTCGGAGACTGCTATGGAATTCCAGTTAA

Protein sequence

MDDNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLIKEFDREVKDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGENYGEDNVLLASKTAAALKAQTEQMSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNKDIQDIPGLAPPVQTQSRRLLWNSS

Homology

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BLAST of Cp4.1LG08g06980 vs. ExPASy Swiss-Prot
Match: Q944A9 (Novel plant SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=NPSN11 PE=1 SV=2)

HSP 1 Score: 319.7 bits (818), Expect = 2.7e-86
Identity = 179/264 (67.80%), Postives = 208/264 (78.79%), Query Frame = 0


Query: 3   DNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLIKE 62
           D +S++SEELA+IEG+INDIFRALSNGFQKLEKIKD NR+SRQLEELTDKMRDCK LIK+
Sbjct: 2   DPISAVSEELAEIEGQINDIFRALSNGFQKLEKIKDANRQSRQLEELTDKMRDCKSLIKD 61

Query: 63  FDREVKDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNL--GNKRIDLFDGPGE 122
           FDRE+K LE  ND++TN+ML++R+QSM+KELNSYVALKK+++SNL   NKR+DLFDGPGE
Sbjct: 62  FDREIKSLESGNDASTNRMLNDRRQSMVKELNSYVALKKKYSSNLASNNKRVDLFDGPGE 121

Query: 123 NYGEDNVLLASK-------------------------------------TAAALKAQTEQ 182
            + E+NVLLAS                                      T+AALKAQTEQ
Sbjct: 122 EHMEENVLLASNMSNQELMDKGNSMMDDTDQAIERGKKIVQETINVGTDTSAALKAQTEQ 181

Query: 183 MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK 226
           MSR+VNELDSIHFSLKKASKLVKE+GRQ+ATDKCIMA LF+IVIGVIAIIIVK+VNPNNK
Sbjct: 182 MSRVVNELDSIHFSLKKASKLVKEIGRQVATDKCIMAFLFLIVIGVIAIIIVKIVNPNNK 241

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BLAST of Cp4.1LG08g06980 vs. ExPASy Swiss-Prot
Match: Q9LRP1 (Novel plant SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=NPSN13 PE=1 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.7e-67
Identity = 146/258 (56.59%), Postives = 181/258 (70.16%), Query Frame = 0


Query: 8   ISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLIKEFDREV 67
           +S +L  I G+I D FRAL+NGFQ+L+KIKD+ R+S+QLEELTDKMR+CKRL+KEFDRE+
Sbjct: 7   MSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVKEFDREL 66

Query: 68  KDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFD----GPGENYG 127
           KD E  N    NK L++ KQSMIKELNSYVAL+K + S LGNK+++LFD      GE   
Sbjct: 67  KDEEARNSPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKVELFDMGAGVSGEPTA 126

Query: 128 EDNVLLAS-------------------------------------KTAAALKAQTEQMSR 187
           E+NV +AS                                     +TAA LK QT+QM R
Sbjct: 127 EENVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLKGQTDQMGR 186

Query: 188 IVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNKDIQ 225
           +VN LD+I FS+KKAS+LVKE+GRQ+ATDKCIM  LF+IV GV+AIIIVK+VNPNNKDI+
Sbjct: 187 VVNHLDTIQFSIKKASQLVKEIGRQVATDKCIMGFLFLIVCGVVAIIIVKIVNPNNKDIR 246

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BLAST of Cp4.1LG08g06980 vs. ExPASy Swiss-Prot
Match: Q9LNH6 (Novel plant SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=NPSN12 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 8.1e-67
Identity = 146/258 (56.59%), Postives = 182/258 (70.54%), Query Frame = 0


Query: 8   ISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLIKEFDREV 67
           +S  L  I G+I D FRAL+NGFQ+L+KIKD++R+S+QLEEL +KMRDCKRL+KEFDRE+
Sbjct: 7   MSPHLEQIHGEIRDHFRALANGFQRLDKIKDSSRQSKQLEELAEKMRDCKRLVKEFDREL 66

Query: 68  KDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFDG----PGENYG 127
           KD E  N    NK L++ KQSMIKELNSYVAL+K + + LGNK+++LFD      GE   
Sbjct: 67  KDGEARNSPQVNKQLNDEKQSMIKELNSYVALRKTYLNTLGNKKVELFDTGAGVSGEPTA 126

Query: 128 EDNVLLAS-------------------------------------KTAAALKAQTEQMSR 187
           E+NV +AS                                     +TA+ LK QT+QM R
Sbjct: 127 EENVQMASTMSNQELVDAGMKRMDETDQAIERSKQVVHQTLEVGTQTASNLKGQTDQMGR 186

Query: 188 IVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNKDIQ 225
           +VN+LD+I FSLKKAS+LVKE+GRQ+ATDKCIMA LF+IV GVIAIIIVK+VNPNNKDI+
Sbjct: 187 VVNDLDTIQFSLKKASQLVKEIGRQVATDKCIMAFLFLIVCGVIAIIIVKIVNPNNKDIR 246

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BLAST of Cp4.1LG08g06980 vs. NCBI nr
Match: XP_023539777.1 (novel plant SNARE 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404 bits (1037), Expect = 1.62e-140
Identity = 226/264 (85.61%), Postives = 227/264 (85.98%), Query Frame = 0


Query: 1   MDDNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLI 60
           MDDNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLI
Sbjct: 1   MDDNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLI 60

Query: 61  KEFDREVKDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGE 120
           KEFDREVKDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGE
Sbjct: 61  KEFDREVKDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGE 120

Query: 121 NYGEDNVLLAS-------------------------------------KTAAALKAQTEQ 180
           NYGEDNVLLAS                                     +TAAALKAQTEQ
Sbjct: 121 NYGEDNVLLASNMTNQQLIDSGNRMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQ 180

Query: 181 MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK 227
           MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK
Sbjct: 181 MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK 240

[Close]

BLAST of Cp4.1LG08g06980 vs. NCBI nr
Match: XP_022935580.1 (novel plant SNARE 11-like [Cucurbita moschata])

HSP 1 Score: 398 bits (1023), Expect = 2.20e-138
Identity = 223/264 (84.47%), Postives = 225/264 (85.23%), Query Frame = 0


Query: 1   MDDNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLI 60
           MDDNLSSISEELAD EGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLI
Sbjct: 1   MDDNLSSISEELADTEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLI 60

Query: 61  KEFDREVKDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGE 120
           KEFDREVKDLEGVNDSNTNKMLSE+KQSMIKELNSYVALKKQHASNLGNKRIDLFDGP E
Sbjct: 61  KEFDREVKDLEGVNDSNTNKMLSEKKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPSE 120

Query: 121 NYGEDNVLLAS-------------------------------------KTAAALKAQTEQ 180
           NYGEDNVLLAS                                     +TAAALKAQTEQ
Sbjct: 121 NYGEDNVLLASNMTNQQLIDSGNRMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQ 180

Query: 181 MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK 227
           MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK
Sbjct: 181 MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK 240

[Close]

BLAST of Cp4.1LG08g06980 vs. NCBI nr
Match: KAG6596901.1 (putative plant SNARE 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 397 bits (1019), Expect = 8.94e-138
Identity = 222/264 (84.09%), Postives = 226/264 (85.61%), Query Frame = 0


Query: 1   MDDNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLI 60
           MDDNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLI
Sbjct: 1   MDDNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLI 60

Query: 61  KEFDREVKDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGE 120
           KEFDREVKDLEG +DSNTNKMLS++KQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGE
Sbjct: 61  KEFDREVKDLEGGHDSNTNKMLSDKKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGE 120

Query: 121 NYGEDNVLLAS-------------------------------------KTAAALKAQTEQ 180
           NYGEDNVLLAS                                     +TAAALKAQTEQ
Sbjct: 121 NYGEDNVLLASNMTNQQLIDSGNRMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQ 180

Query: 181 MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK 227
           MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK
Sbjct: 181 MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK 240

[Close]

BLAST of Cp4.1LG08g06980 vs. NCBI nr
Match: XP_023005509.1 (novel plant SNARE 11-like [Cucurbita maxima])

HSP 1 Score: 395 bits (1014), Expect = 5.16e-137
Identity = 221/264 (83.71%), Postives = 226/264 (85.61%), Query Frame = 0


Query: 1   MDDNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLI 60
           MDDNLSSISEELADIEGKINDIFRALSNGFQKLEKIKD+NRKSRQLEELTDKMRDCKRLI
Sbjct: 1   MDDNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDSNRKSRQLEELTDKMRDCKRLI 60

Query: 61  KEFDREVKDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGE 120
           KEFDREVKDLEG NDSNTNKMLSE+KQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGE
Sbjct: 61  KEFDREVKDLEGGNDSNTNKMLSEKKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGE 120

Query: 121 NYGEDNVLLAS-------------------------------------KTAAALKAQTEQ 180
           +YGEDNVLLAS                                     +TAAALKAQTEQ
Sbjct: 121 SYGEDNVLLASNMTNQQLIDSGNRMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQ 180

Query: 181 MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK 227
           MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK
Sbjct: 181 MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK 240

[Close]

BLAST of Cp4.1LG08g06980 vs. NCBI nr
Match: XP_022923361.1 (novel plant SNARE 11-like [Cucurbita moschata] >XP_022965148.1 novel plant SNARE 11-like [Cucurbita maxima] >KAG6577650.1 putative plant SNARE 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 365 bits (936), Expect = 3.50e-125
Identity = 206/261 (78.93%), Postives = 217/261 (83.14%), Query Frame = 0


Query: 3   DNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLIKE 62
           D+L+SISEELADIEG+INDI RALSNGFQKLEKIKDTNR+SRQLEELTDKMR+CKRLIK+
Sbjct: 2   DSLASISEELADIEGQINDILRALSNGFQKLEKIKDTNRRSRQLEELTDKMRECKRLIKD 61

Query: 63  FDREVKDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGENY 122
           FDREVKDLEG NDSNTNKMLSERKQ+MIKELNSYVALKKQHAS L NKRIDLFDGPGENY
Sbjct: 62  FDREVKDLEGGNDSNTNKMLSERKQAMIKELNSYVALKKQHASTLDNKRIDLFDGPGENY 121

Query: 123 GEDNVLLAS-------------------------------------KTAAALKAQTEQMS 182
           GE+NVLLAS                                     +TAAALKAQTEQMS
Sbjct: 122 GEENVLLASNMTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMS 181

Query: 183 RIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNKDI 226
           RIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIV+GVIAIIIVKLVNPNNKDI
Sbjct: 182 RIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIVKLVNPNNKDI 241

[Close]

BLAST of Cp4.1LG08g06980 vs. ExPASy TrEMBL
Match: A0A6J1FB13 (novel plant SNARE 11-like OS=Cucurbita moschata OX=3662 GN=LOC111442409 PE=4 SV=1)

HSP 1 Score: 398 bits (1023), Expect = 1.06e-138
Identity = 223/264 (84.47%), Postives = 225/264 (85.23%), Query Frame = 0


Query: 1   MDDNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLI 60
           MDDNLSSISEELAD EGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLI
Sbjct: 1   MDDNLSSISEELADTEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLI 60

Query: 61  KEFDREVKDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGE 120
           KEFDREVKDLEGVNDSNTNKMLSE+KQSMIKELNSYVALKKQHASNLGNKRIDLFDGP E
Sbjct: 61  KEFDREVKDLEGVNDSNTNKMLSEKKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPSE 120

Query: 121 NYGEDNVLLAS-------------------------------------KTAAALKAQTEQ 180
           NYGEDNVLLAS                                     +TAAALKAQTEQ
Sbjct: 121 NYGEDNVLLASNMTNQQLIDSGNRMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQ 180

Query: 181 MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK 227
           MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK
Sbjct: 181 MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK 240

[Close]

BLAST of Cp4.1LG08g06980 vs. ExPASy TrEMBL
Match: A0A6J1KZD8 (novel plant SNARE 11-like OS=Cucurbita maxima OX=3661 GN=LOC111498473 PE=4 SV=1)

HSP 1 Score: 395 bits (1014), Expect = 2.50e-137
Identity = 221/264 (83.71%), Postives = 226/264 (85.61%), Query Frame = 0


Query: 1   MDDNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLI 60
           MDDNLSSISEELADIEGKINDIFRALSNGFQKLEKIKD+NRKSRQLEELTDKMRDCKRLI
Sbjct: 1   MDDNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDSNRKSRQLEELTDKMRDCKRLI 60

Query: 61  KEFDREVKDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGE 120
           KEFDREVKDLEG NDSNTNKMLSE+KQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGE
Sbjct: 61  KEFDREVKDLEGGNDSNTNKMLSEKKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGE 120

Query: 121 NYGEDNVLLAS-------------------------------------KTAAALKAQTEQ 180
           +YGEDNVLLAS                                     +TAAALKAQTEQ
Sbjct: 121 SYGEDNVLLASNMTNQQLIDSGNRMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQ 180

Query: 181 MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK 227
           MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK
Sbjct: 181 MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK 240

[Close]

BLAST of Cp4.1LG08g06980 vs. ExPASy TrEMBL
Match: A0A6J1HN11 (novel plant SNARE 11-like OS=Cucurbita maxima OX=3661 GN=LOC111465090 PE=4 SV=1)

HSP 1 Score: 365 bits (936), Expect = 1.70e-125
Identity = 206/261 (78.93%), Postives = 217/261 (83.14%), Query Frame = 0


Query: 3   DNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLIKE 62
           D+L+SISEELADIEG+INDI RALSNGFQKLEKIKDTNR+SRQLEELTDKMR+CKRLIK+
Sbjct: 2   DSLASISEELADIEGQINDILRALSNGFQKLEKIKDTNRRSRQLEELTDKMRECKRLIKD 61

Query: 63  FDREVKDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGENY 122
           FDREVKDLEG NDSNTNKMLSERKQ+MIKELNSYVALKKQHAS L NKRIDLFDGPGENY
Sbjct: 62  FDREVKDLEGGNDSNTNKMLSERKQAMIKELNSYVALKKQHASTLDNKRIDLFDGPGENY 121

Query: 123 GEDNVLLAS-------------------------------------KTAAALKAQTEQMS 182
           GE+NVLLAS                                     +TAAALKAQTEQMS
Sbjct: 122 GEENVLLASNMTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMS 181

Query: 183 RIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNKDI 226
           RIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIV+GVIAIIIVKLVNPNNKDI
Sbjct: 182 RIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIVKLVNPNNKDI 241

[Close]

BLAST of Cp4.1LG08g06980 vs. ExPASy TrEMBL
Match: A0A6J1E6L5 (novel plant SNARE 11-like OS=Cucurbita moschata OX=3662 GN=LOC111431082 PE=4 SV=1)

HSP 1 Score: 365 bits (936), Expect = 1.70e-125
Identity = 206/261 (78.93%), Postives = 217/261 (83.14%), Query Frame = 0


Query: 3   DNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLIKE 62
           D+L+SISEELADIEG+INDI RALSNGFQKLEKIKDTNR+SRQLEELTDKMR+CKRLIK+
Sbjct: 2   DSLASISEELADIEGQINDILRALSNGFQKLEKIKDTNRRSRQLEELTDKMRECKRLIKD 61

Query: 63  FDREVKDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGENY 122
           FDREVKDLEG NDSNTNKMLSERKQ+MIKELNSYVALKKQHAS L NKRIDLFDGPGENY
Sbjct: 62  FDREVKDLEGGNDSNTNKMLSERKQAMIKELNSYVALKKQHASTLDNKRIDLFDGPGENY 121

Query: 123 GEDNVLLAS-------------------------------------KTAAALKAQTEQMS 182
           GE+NVLLAS                                     +TAAALKAQTEQMS
Sbjct: 122 GEENVLLASNMTNQQLVDRGNKMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMS 181

Query: 183 RIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNKDI 226
           RIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIV+GVIAIIIVKLVNPNNKDI
Sbjct: 182 RIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVLGVIAIIIVKLVNPNNKDI 241

[Close]

BLAST of Cp4.1LG08g06980 vs. ExPASy TrEMBL
Match: A0A1S3BLC3 (novel plant SNARE 11 OS=Cucumis melo OX=3656 GN=LOC103490829 PE=4 SV=1)

HSP 1 Score: 362 bits (929), Expect = 1.97e-124
Identity = 204/261 (78.16%), Postives = 218/261 (83.52%), Query Frame = 0


Query: 3   DNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLIKE 62
           D LSSISEELADIEG+INDIFRALSNGFQKLEKIKD+NR+SRQLEELTDKMR+CKRLIKE
Sbjct: 2   DTLSSISEELADIEGQINDIFRALSNGFQKLEKIKDSNRRSRQLEELTDKMRECKRLIKE 61

Query: 63  FDREVKDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGENY 122
           FDREVKDLEG N++NTNKMLSE+KQSMIKELNSYVALKKQHAS L NKRIDLFDGPGE+Y
Sbjct: 62  FDREVKDLEGGNNANTNKMLSEKKQSMIKELNSYVALKKQHASTLDNKRIDLFDGPGESY 121

Query: 123 GEDNVLLAS-------------------------------------KTAAALKAQTEQMS 182
           GE+NVLLAS                                     +TAAALKAQTEQMS
Sbjct: 122 GEENVLLASNMTNQQLIDSGNRMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQMS 181

Query: 183 RIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNKDI 226
           RIVNELDSIHFSLKKASKLVKELGRQ+ATDKCIMALLFIIV+GVIAIIIVKLVNPNNKDI
Sbjct: 182 RIVNELDSIHFSLKKASKLVKELGRQVATDKCIMALLFIIVLGVIAIIIVKLVNPNNKDI 241

[Close]

BLAST of Cp4.1LG08g06980 vs. TAIR 10
Match: AT2G35190.1 (novel plant snare 11 )

HSP 1 Score: 319.7 bits (818), Expect = 1.9e-87
Identity = 179/264 (67.80%), Postives = 208/264 (78.79%), Query Frame = 0


Query: 3   DNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLIKE 62
           D +S++SEELA+IEG+INDIFRALSNGFQKLEKIKD NR+SRQLEELTDKMRDCK LIK+
Sbjct: 2   DPISAVSEELAEIEGQINDIFRALSNGFQKLEKIKDANRQSRQLEELTDKMRDCKSLIKD 61

Query: 63  FDREVKDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNL--GNKRIDLFDGPGE 122
           FDRE+K LE  ND++TN+ML++R+QSM+KELNSYVALKK+++SNL   NKR+DLFDGPGE
Sbjct: 62  FDREIKSLESGNDASTNRMLNDRRQSMVKELNSYVALKKKYSSNLASNNKRVDLFDGPGE 121

Query: 123 NYGEDNVLLASK-------------------------------------TAAALKAQTEQ 182
            + E+NVLLAS                                      T+AALKAQTEQ
Sbjct: 122 EHMEENVLLASNMSNQELMDKGNSMMDDTDQAIERGKKIVQETINVGTDTSAALKAQTEQ 181

Query: 183 MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK 226
           MSR+VNELDSIHFSLKKASKLVKE+GRQ+ATDKCIMA LF+IVIGVIAIIIVK+VNPNNK
Sbjct: 182 MSRVVNELDSIHFSLKKASKLVKEIGRQVATDKCIMAFLFLIVIGVIAIIIVKIVNPNNK 241

[Close]

BLAST of Cp4.1LG08g06980 vs. TAIR 10
Match: AT3G17440.1 (novel plant snare 13 )

HSP 1 Score: 255.8 bits (652), Expect = 3.4e-68
Identity = 146/258 (56.59%), Postives = 181/258 (70.16%), Query Frame = 0


Query: 8   ISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLIKEFDREV 67
           +S +L  I G+I D FRAL+NGFQ+L+KIKD+ R+S+QLEELTDKMR+CKRL+KEFDRE+
Sbjct: 7   MSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVKEFDREL 66

Query: 68  KDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFD----GPGENYG 127
           KD E  N    NK L++ KQSMIKELNSYVAL+K + S LGNK+++LFD      GE   
Sbjct: 67  KDEEARNSPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKVELFDMGAGVSGEPTA 126

Query: 128 EDNVLLAS-------------------------------------KTAAALKAQTEQMSR 187
           E+NV +AS                                     +TAA LK QT+QM R
Sbjct: 127 EENVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLKGQTDQMGR 186

Query: 188 IVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNKDIQ 225
           +VN LD+I FS+KKAS+LVKE+GRQ+ATDKCIM  LF+IV GV+AIIIVK+VNPNNKDI+
Sbjct: 187 VVNHLDTIQFSIKKASQLVKEIGRQVATDKCIMGFLFLIVCGVVAIIIVKIVNPNNKDIR 246

[Close]

BLAST of Cp4.1LG08g06980 vs. TAIR 10
Match: AT1G48240.1 (novel plant snare 12 )

HSP 1 Score: 255.0 bits (650), Expect = 5.7e-68
Identity = 146/258 (56.59%), Postives = 182/258 (70.54%), Query Frame = 0


Query: 8   ISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLIKEFDREV 67
           +S  L  I G+I D FRAL+NGFQ+L+KIKD++R+S+QLEEL +KMRDCKRL+KEFDRE+
Sbjct: 7   MSPHLEQIHGEIRDHFRALANGFQRLDKIKDSSRQSKQLEELAEKMRDCKRLVKEFDREL 66

Query: 68  KDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFDG----PGENYG 127
           KD E  N    NK L++ KQSMIKELNSYVAL+K + + LGNK+++LFD      GE   
Sbjct: 67  KDGEARNSPQVNKQLNDEKQSMIKELNSYVALRKTYLNTLGNKKVELFDTGAGVSGEPTA 126

Query: 128 EDNVLLAS-------------------------------------KTAAALKAQTEQMSR 187
           E+NV +AS                                     +TA+ LK QT+QM R
Sbjct: 127 EENVQMASTMSNQELVDAGMKRMDETDQAIERSKQVVHQTLEVGTQTASNLKGQTDQMGR 186

Query: 188 IVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNKDIQ 225
           +VN+LD+I FSLKKAS+LVKE+GRQ+ATDKCIMA LF+IV GVIAIIIVK+VNPNNKDI+
Sbjct: 187 VVNDLDTIQFSLKKASQLVKEIGRQVATDKCIMAFLFLIVCGVIAIIIVKIVNPNNKDIR 246

[Close]

BLAST of Cp4.1LG08g06980 vs. TAIR 10
Match: AT3G17440.2 (novel plant snare 13 )

HSP 1 Score: 183.0 bits (463), Expect = 2.8e-46
Identity = 106/206 (51.46%), Postives = 135/206 (65.53%), Query Frame = 0


Query: 8   ISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLIKEFDREV 67
           +S +L  I G+I D FRAL+NGFQ+L+KIKD+ R+S+QLEELTDKMR+CKRL+KEFDRE+
Sbjct: 7   MSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVKEFDREL 66

Query: 68  KDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFD----GPGENYG 127
           KD E  N    NK L++ KQSMIKELNSYVAL+K + S LGNK+++LFD      GE   
Sbjct: 67  KDEEARNSPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKVELFDMGAGVSGEPTA 126

Query: 128 EDNVLLAS-------------------------------------KTAAALKAQTEQMSR 173
           E+NV +AS                                     +TAA LK QT+QM R
Sbjct: 127 EENVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLKGQTDQMGR 186

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g06980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q944A9	2.7e-86	67.80	Novel plant SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=NPSN11 PE=1 SV=2	[more]
Q9LRP1	4.7e-67	56.59	Novel plant SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=NPSN13 PE=1 SV=1	[more]
Q9LNH6	8.1e-67	56.59	Novel plant SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=NPSN12 PE=2 SV=1	[more]

BLAST of Cp4.1LG08g06980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539777.1	1.62e-140	85.61	novel plant SNARE 11-like [Cucurbita pepo subsp. pepo]	[more]
XP_022935580.1	2.20e-138	84.47	novel plant SNARE 11-like [Cucurbita moschata]	[more]
KAG6596901.1	8.94e-138	84.09	putative plant SNARE 11, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023005509.1	5.16e-137	83.71	novel plant SNARE 11-like [Cucurbita maxima]	[more]
XP_022923361.1	3.50e-125	78.93	novel plant SNARE 11-like [Cucurbita moschata] >XP_022965148.1 novel plant SNARE...	[more]

BLAST of Cp4.1LG08g06980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FB13	1.06e-138	84.47	novel plant SNARE 11-like OS=Cucurbita moschata OX=3662 GN=LOC111442409 PE=4 SV=...	[more]
A0A6J1KZD8	2.50e-137	83.71	novel plant SNARE 11-like OS=Cucurbita maxima OX=3661 GN=LOC111498473 PE=4 SV=1	[more]
A0A6J1HN11	1.70e-125	78.93	novel plant SNARE 11-like OS=Cucurbita maxima OX=3661 GN=LOC111465090 PE=4 SV=1	[more]
A0A6J1E6L5	1.70e-125	78.93	novel plant SNARE 11-like OS=Cucurbita moschata OX=3662 GN=LOC111431082 PE=4 SV=...	[more]
A0A1S3BLC3	1.97e-124	78.16	novel plant SNARE 11 OS=Cucumis melo OX=3656 GN=LOC103490829 PE=4 SV=1	[more]

BLAST of Cp4.1LG08g06980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35190.1	1.9e-87	67.80	novel plant snare 11	[more]
AT3G17440.1	3.4e-68	56.59	novel plant snare 13	[more]
AT1G48240.1	5.7e-68	56.59	novel plant snare 12	[more]
AT3G17440.2	2.8e-46	51.46	novel plant snare 13	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 46..73
None	No IPR available	GENE3D	1.20.5.110		coord: 124..170 e-value: 1.3E-7 score: 33.4
None	No IPR available	PANTHER	PTHR21230	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	coord: 2..133
None	No IPR available	PANTHER	PTHR21230:SF27	NOVEL PLANT SNARE 11	coord: 132..214
None	No IPR available	PANTHER	PTHR21230:SF27	NOVEL PLANT SNARE 11	coord: 2..133
None	No IPR available	PANTHER	PTHR21230	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	coord: 132..214
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 129..169
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 129..168 score: 8.579951

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g06980.1	Cp4.1LG08g06980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
biological_process	GO:0006906	vesicle fusion
cellular_component	GO:0009504	cell plate
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0012507	ER to Golgi transport vesicle membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031902	late endosome membrane
cellular_component	GO:0031201	SNARE complex
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0000149	SNARE binding